|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
1.20e-163 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 468.48 E-value: 1.20e-163
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 1 MLKFLFLLLFLIPLSLKKSGFWMVQNMLFLFSLLFILLNNCSNYWMNLSYFMGCDLISYGMVLLSLWICTLMLLASESIY 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 81 KNNNYSSFFVLNVLFLLLFLYLTFSSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFF 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 161 LYDSMNTMNFYLMT-GSYGNELLYISMIFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQS 239
Cdd:MTH00163 161 LYNNSGSLSFFLLNfFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 240 IGLVYNFIWISISLVGGVLVSLVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANI 319
Cdd:MTH00163 241 LGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 320 SYERLGSRSLLINKGLLNFMPSMALWWFLLSSANMAAPPTMNLLGEISLLNSIVSWSWLTMLMLSFVSFFGAAYTLYMYA 399
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 1935448367 400 YSQHGKLFSGLYSISGGSSREYLLLFLHWFPLNLLILKSDFCMLW 444
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
42-445 |
5.47e-122 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 361.46 E-value: 5.47e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 42 SNYWMNLSYFMGCDLISYGMVLLSLWICTLMLLASESIYKNNNYSSFFVLNVLFLLLFLYLTFSSMNLFMFYLFFESSLI 121
Cdd:MTH00150 10 FSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 122 PTLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLMT----GSYGNELLYISMIFAFLVKMPMF 197
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISslrkLLSSMGLWGLLVFLAFLVKLPMY 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 198 LVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIWISISLVGGVLVSLVCLRQTDLKALIAYSS 277
Cdd:MTH00150 170 PFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 278 VSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMALWWFLLSSANMAAP 357
Cdd:MTH00150 250 VGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAP 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 358 PTMNLLGEISLLNSIVSWSWLTMLMLSFVSFFGAAYTLYMYAYSQHGKLFSGLYSISGGSSREYLLLFLHWFPLNLLILK 437
Cdd:MTH00150 330 PSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILK 409
|
....*...
gi 1935448367 438 SDFCMLWL 445
Cdd:MTH00150 410 SDLLFMWI 417
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
23-442 |
2.62e-117 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 350.43 E-value: 2.62e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 23 MVQNMLFLFSLLFILLNNCSNYWMNLSYFMGCDLISYGMVLLSLWICTLMLLASESIYKNNNYSSFFVLNVLFLLLFLYL 102
Cdd:MTH00205 24 FSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILIL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 103 TFSSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLMT----GSYG 178
Cdd:MTH00205 104 SFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFplnfSDFY 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 179 NELLYISMIFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIWISISLVGGVL 258
Cdd:MTH00205 184 LFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVM 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 259 VSLVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNF 338
Cdd:MTH00205 264 TGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNT 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 339 MPSMALWWFLLSSANMAAPPTMNLLGEISLLNSIVSWSWLTMLMLSFVSFFGAAYTLYMYAYSQHGKLFSGLYSISGGSS 418
Cdd:MTH00205 344 FPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISE 423
|
410 420
....*....|....*....|....
gi 1935448367 419 REYLLLFLHWFPLNLLILKSDFCM 442
Cdd:MTH00205 424 REYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
47-445 |
7.51e-115 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 344.42 E-value: 7.51e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 47 NLSYFMGCDLISYGMVLLSLWICTLMLLASESIYKNNNYSSFFVLNVLFLLLFLYLTFSSMNLFMFYLFFESSLIPTLFL 126
Cdd:MTH00014 50 MFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFL 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 127 ILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLMTGS----YGNELLYISMIFAFLVKMPMFLVHLW 202
Cdd:MTH00014 130 ILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSSMEppsiYLMNLWWLITILAFMVKMPLYTVHLW 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 203 LPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIWISISLVGGVLVSLVCLRQTDLKALIAYSSVSHMG 282
Cdd:MTH00014 210 LPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMG 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 283 IVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMALWWFLLSSANMAAPPTMNL 362
Cdd:MTH00014 290 LMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINL 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 363 LGEISLLNSIVSWSWLTMLMLSFVSFFGAAYTLYMYAYSQHGKLFSGLYSISGGSSREYLLLFLHWFPLNLLILKSDFCM 442
Cdd:MTH00014 370 LSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
...
gi 1935448367 443 LWL 445
Cdd:MTH00014 450 NWL 452
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
46-437 |
2.48e-112 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 337.94 E-value: 2.48e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 46 MNLSYFMGCDLISYGMVLLSLWICTLMLLASESIYKNNNYSS--FFVLNVLFLLLFLYLTFSSMNLFMFYLFFESSLIPT 123
Cdd:MTH00124 50 KNLTQWLGIDQISAPLLVLSCWLLPLMILASQNHLQHEPLQRkrTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPT 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 124 LFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLM-------TGSYGNELLYISMIFAFLVKMPM 196
Cdd:MTH00124 130 LILITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLHNQTGTLSLPMLqlthptlTNSWTNLLLWLACLMAFMVKMPL 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 197 FLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIWISISLVGGVLVSLVCLRQTDLKALIAYS 276
Cdd:MTH00124 210 YGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYS 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 277 SVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMALWWFLLSSANMAA 356
Cdd:MTH00124 290 SVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMAL 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 357 PPTMNLLGEISLLNSIVSWSWLTMLMLSFVSFFGAAYTLYMYAYSQHGKLFSGLYSISGGSSREYLLLFLHWFPLNLLIL 436
Cdd:MTH00124 370 PPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLIL 449
|
.
gi 1935448367 437 K 437
Cdd:MTH00124 450 K 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
39-443 |
4.15e-107 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 324.62 E-value: 4.15e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 39 NNCSNYWMNLSYFMGCDLISYGMVLLSLWICTLMLLASESIYKNNNYSS--FFVLNVLFLLLFLYLTFSSMNLFMFYLFF 116
Cdd:MTH00044 44 NHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSNNSPNNqrTFISLIIIILTALIITFSSLELILFYIAF 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 117 ESSLIPTLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNF----YLMTGSYGNELLYISMIF---A 189
Cdd:MTH00044 124 ETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIplseLNWLTSLSSNSSSIWWIFcilA 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 190 FLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVY-NFIWISISLVGGVLVSLVCLRQTD 268
Cdd:MTH00044 204 FLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSANNiSFILIVFCCWGALITSIICLRQTD 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 269 LKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMALWWFL 348
Cdd:MTH00044 284 LKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLI 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 349 LSSANMAAPPTMNLLGEISLLNSIVSWSWLTMLMLSFVSFFGAAYTLYMYAYSQHGKLFSGLYSISGGSSREYLLLFLHW 428
Cdd:MTH00044 364 FCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHL 443
|
410
....*....|....*
gi 1935448367 429 FPLNLLILKSDFCML 443
Cdd:MTH00044 444 LPLILIIINPNIILI 458
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
39-437 |
7.82e-106 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 321.48 E-value: 7.82e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 39 NNCSNYWMNLSYFMGCDLISYGMVLLSLWICTLMLLASESIYKNN--NYSSFFVLNVLFLLLFLYLTFSSMNLFMFYLFF 116
Cdd:MTH00068 43 NLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILASQNHLKNEpiNRQRTYISMLIILQLTLILAFSATELILFYIFF 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 117 ESSLIPTLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLM-------TGSYGNELLYISMIFA 189
Cdd:MTH00068 123 EATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILLelmspmqLMTYTNKIWWLACLLA 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 190 FLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIWISISLVGGVLVSLVCLRQTDL 269
Cdd:MTH00068 203 FMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDL 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 270 KALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMALWWFLL 349
Cdd:MTH00068 283 KSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLS 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 350 SSANMAAPPTMNLLGEISLLNSIVSWSWLTMLMLSFVSFFGAAYTLYMYAYSQHGKLFSGLYSISGGSSREYLLLFLHWF 429
Cdd:MTH00068 363 NLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHIL 442
|
....*...
gi 1935448367 430 PLNLLILK 437
Cdd:MTH00068 443 PMLLLILK 450
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
45-441 |
1.53e-101 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 309.95 E-value: 1.53e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 45 WMNLSYFMGCDLISYGMVLLSLWICTLMLLASESIYKNN--NYSSFFVLNVLFLLLFLYLTFSSMNLFMFYLFFESSLIP 122
Cdd:MTH00206 48 WSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEpiNRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIP 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 123 TLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLMTGS----YGNELLYISMIFAFLVKMPMFL 198
Cdd:MTH00206 128 TLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSklttWNNNLWWLACILAFLVKLPLYG 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 199 VHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIWISISLVGGVLVSLVCLRQTDLKALIAYSSV 278
Cdd:MTH00206 208 VHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSV 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 279 SHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMALWWFLLSSANMAAPP 358
Cdd:MTH00206 288 SHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPP 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 359 TMNLLGEISLLNSIVSWSWLTMLMLSFVSFFGAAYTLYMYAYSQHGKLFSGLYSISGGSSREYLLLFLHWFPLNLLILKS 438
Cdd:MTH00206 368 FPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNP 447
|
...
gi 1935448367 439 DFC 441
Cdd:MTH00206 448 NLI 450
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
39-442 |
2.86e-99 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 304.51 E-value: 2.86e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 39 NNCSNYWMNLSYFMGCDLISYGMVLLSLWICTLMLLASESIYKNNNYSS--FFVLNVLFLLLFLYLTFSSMNLFMFYLFF 116
Cdd:MTH00110 43 NQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMASQHHLSKEPLTRkkLYITMLILLQLFLIMTFTATELIMFYILF 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 117 ESSLIPTLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLMT-------GSYGNELLYISMIFA 189
Cdd:MTH00110 123 EATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFLLLQlwaqplpNSWSNNLLWLACMMA 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 190 FLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIWISISLVGGVLVSLVCLRQTDL 269
Cdd:MTH00110 203 FMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDL 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 270 KALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMALWWFLL 349
Cdd:MTH00110 283 KSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLA 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 350 SSANMAAPPTMNLLGEISLLNSIVSWSWLTMLMLSFVSFFGAAYTLYMYAYSQHGKLFSGLYSISGGSSREYLLLFLHWF 429
Cdd:MTH00110 363 SLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLL 442
|
410
....*....|...
gi 1935448367 430 PLNLLILKSDFCM 442
Cdd:MTH00110 443 PLLLLSLNPKIIL 455
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
45-437 |
8.21e-91 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 283.00 E-value: 8.21e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 45 WMNLSYFMGCDLISYGMVLLSLWICTLMLLASES--IYKNNNYSSFFVLNVLFLLLFLYLTFSSMNLFMFYLFFESSLIP 122
Cdd:MTH00127 50 WSSLNLYMATDPLSTPLLVLTCWLLPLMILASQNhtAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIP 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 123 TLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNF-------YLMTGSYGNELLYISMIFAFLVKMP 195
Cdd:MTH00127 130 TLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMltlqysqPLQLSSWADKLWWAGCLLAFLVKMP 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 196 MFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIWISISLVGGVLVSLVCLRQTDLKALIAY 275
Cdd:MTH00127 210 LYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAY 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 276 SSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMALWWFLLSSANMA 355
Cdd:MTH00127 290 SSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLA 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 356 APPTMNLLGEISLLNSIVSWSWLTMLMLSFVSFFGAAYTLYMYAYSQHGKLFSGLYSISGGSSREYLLLFLHWFPLNLLI 435
Cdd:MTH00127 370 LPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLI 449
|
..
gi 1935448367 436 LK 437
Cdd:MTH00127 450 LK 451
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
106-387 |
2.97e-63 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 206.01 E-value: 2.97e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 106 SMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNF-------YLMTGSYG 178
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFdelskalTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 179 NELLYISMIFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIWISISLVGGVL 258
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 259 VSLVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLA-NISYERLGSRSLLINKGLLN 337
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1935448367 338 FMPSMALWWFLLSSANMAAPPTMNLLGEISLLNSIVSWSWLTMLMLSFVS 387
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
47-436 |
1.16e-60 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 204.93 E-value: 1.16e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 47 NLSYFMGCDLISYGMVLLSLWICTLMLLASESIYKNNnySSFFVLNVLFLLLFLYLTFSSMNLFMFYLFFESSLIPTLFL 126
Cdd:COG1008 73 GISYHLGVDGISLPLVLLTALLTPLAILASWNEIKKR--PKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 127 ILGWGYqPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNF---YLMTGSYGNE---LLYISMIFAFLVKMPMFLVH 200
Cdd:COG1008 151 IGIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFdiaELAAAPLPLTaqlLLFLAFFIAFAVKVPMFPFH 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 201 LWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIWISI-SLVGGVLVSLVCLRQTDLKALIAYSSVS 279
Cdd:COG1008 230 TWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAAlGVIGIIYGALVALAQTDLKRLIAYSSVS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 280 HMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMALWWFLLSSANMAAPPT 359
Cdd:COG1008 310 HMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGT 389
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1935448367 360 MNLLGEISLLNSIVSWSWLTMLMLSFVSFFGAAYTLYMYAYSQHGKLFSGLYSISGGSSREYLLLflhwFPLNLLIL 436
Cdd:COG1008 390 SGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVL----APLAALIL 462
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
47-436 |
1.91e-56 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 194.27 E-value: 1.91e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 47 NLSYFMGCDLISYGMVLLSLWICTLMLLASESIYKNnnYSSFFVLNVLFLLLFLYLTFSSMNLFMFYLFFESSLIPTLFL 126
Cdd:PRK05846 73 GISYHLGVDGISLLLVVLTALLTPLAVLASWEEIKK--RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFL 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 127 ILGWGYqPERLQAGVYLLFYTLFGSLPMLISIFFLY----DSMNTMNF-YLMTGSYGNE---LLYISMIFAFLVKMPMFL 198
Cdd:PRK05846 151 IGVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVvvyyNATGTFDIaDLLNLPLPPGvqyWLFLAFFIAFAVKMPMFP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 199 VHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFL---QSIGLVYnfIWISISLVGGVLVSLVCLRQTDLKALIAY 275
Cdd:PRK05846 230 LHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLfpdASHEFAP--IIITLGVIAIIYGALVALAQTDIKKLIAY 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 276 SSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMALWWFLLSSANMA 355
Cdd:PRK05846 308 SSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLG 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 356 APPTMNLLGEISLLNSIVSWSWLTMLMLSFVSFFGAAYTLYMYAYSQHGKLFSGLYSISGGSSREYLLLflhwFPLNLLI 435
Cdd:PRK05846 388 LPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLIL----LPLVALL 463
|
.
gi 1935448367 436 L 436
Cdd:PRK05846 464 L 464
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
105-398 |
8.01e-53 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 184.11 E-value: 8.01e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 105 SSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLMTG----SYGNE 180
Cdd:MTH00204 130 SVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNiklpLSIQK 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 181 LLYISMIFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRV-FLFLQSIGLVYNFIWISISLVGGVLV 259
Cdd:MTH00204 210 WLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFsWPLFPAASEYFAPLIVMLSVIAVIYG 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 260 SLVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFM 339
Cdd:MTH00204 290 SLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTM 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1935448367 340 PSMALWWFLLSSANMAAPPTMNLLGEISLLNSIVSWSWLTMLMLSFVSFFGAAYTLYMY 398
Cdd:MTH00204 370 PLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
47-398 |
2.42e-52 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 182.83 E-value: 2.42e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 47 NLSYFMGCDLISYGMVLLSLWICTLMLLASEsiYKNNNYSSFFVLNVLFLLLFLYLTFSSMNLFMFYLFFESSLIPTLFL 126
Cdd:TIGR01972 68 GISYHLGVDGISLLLVLLTALLTLLAILASW--ESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 127 ILGWGyQPERLQAGVYLLFYTLFGSLPMLISIFFLY----DSMNTMNFYLMTGSYGNEL-LYISMIFAFLVKMPMFLVHL 201
Cdd:TIGR01972 146 IGVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYflggGTFDLLELLNLPLPFGVQTwLFLAFFIAFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 202 WLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIWISI-SLVGGVLVSLVCLRQTDLKALIAYSSVSH 280
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAAlGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 281 MGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMALWWFLLSSANMAAPPTM 360
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350
....*....|....*....|....*....|....*...
gi 1935448367 361 NLLGEISLLNSIVSWSWLTMLMLSFVSFFGAAYTLYMY 398
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
107-398 |
4.69e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 171.39 E-value: 4.69e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 107 MNLFMFYLFFESSLIPtLFLILG-WGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNF-YLMTGSYGNEL--- 181
Cdd:MTH00217 129 LDLVGFYILFEGILIP-MFLIIGiWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYqALCCLKIEKELqyf 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 182 LYISMIFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIWI-SISLVGGVLVS 260
Cdd:MTH00217 208 IFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGS 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 261 LVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMP 340
Cdd:MTH00217 288 LTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMP 367
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1935448367 341 SMALWWFLLSSANMAAPPTMNLLGEISLLNSIVSWSWLTMLMLSFVSFFGAAYTLYMY 398
Cdd:MTH00217 368 LFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
105-396 |
2.17e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 150.84 E-value: 2.17e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 105 SSMNLFMFYLFFESSLIPtLFLILG-WGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLMTGSYG----- 178
Cdd:MTH00226 149 SVLDIFMFYILFEGVLIP-MYLILGiWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHvvseq 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 179 -NELLYISMIFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGlVYNFI--WISISLVG 255
Cdd:MTH00226 228 tQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLG-AQNLApaVIAMGIVG 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 256 GVLVSLVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGL 335
Cdd:MTH00226 307 IVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGL 386
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1935448367 336 LNFMPSMALWWFLLSSANMAAPPTMNLLGEISLLNSIVSWSWLTMLMLSFVSFFGAAYTLY 396
Cdd:MTH00226 387 SITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
106-435 |
3.13e-39 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 145.82 E-value: 3.13e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 106 SMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLMTgsygNELLYIS 185
Cdd:MTH00094 81 SSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFL----SWEMFFI 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 186 MIFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQsigLVYNFIWISISLVGGVLVSLVCLR 265
Cdd:MTH00094 157 LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLN---FVYNNFWIIFSLLGMILSSFCCVF 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 266 QTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMALW 345
Cdd:MTH00094 234 QSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLI 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 346 WFLLSSANMAAPPTMNLLGEISLLNSIVSWSWLTMLMLSFVSFFGAAYTLYMYAYSQHGKLFSGLYSISGGSSREYLLLF 425
Cdd:MTH00094 314 FSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSLPLVFMM 393
|
330
....*....|
gi 1935448367 426 LHWFPLNLLI 435
Cdd:MTH00094 394 FNMFWLSLFY 403
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
108-402 |
2.16e-33 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 130.27 E-value: 2.16e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 108 NLFMFYLFFESSLIPTLFLILGWGYqPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLMTGSYGN------EL 181
Cdd:COG0651 128 DLFNLFVFFEVMLLASYGLVALGGT-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAEldpgllLA 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 182 LYISMIFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVF--LFLQSIGLVYNFIWISISLVGGVLV 259
Cdd:COG0651 207 AFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLtlLFGADPALFLGTLLLVLGLLTMLVG 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 260 SLVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFM 339
Cdd:COG0651 287 ALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRM 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1935448367 340 PSMALWWFLLSSANMAAPPTMNLLGEISLLNSIV-SWSWLTMLMLSFVSFFGAAYTLYMYAYSQ 402
Cdd:COG0651 367 PLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
46-374 |
7.71e-30 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 121.29 E-value: 7.71e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 46 MNLSYFMGCDLISYGMVLLSLWICTLMLLASesiYKNNNYSSFFVLNVLFLLLFLYLTFSSMNLFMFYLFFESSLIPTLF 125
Cdd:PRK12561 49 IGLEWSLGVDGLSMPLVLLSGLITTLSIFAS---WKVTRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 126 LILGWGYQpERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNF---YLMTGSYGNE---LLYISMIFAFLVKMPMFLV 199
Cdd:PRK12561 126 LISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFdlaELGAKSYPLAlelLLYAGFLIAFGVKLPIFPL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 200 HLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFL-FLQSIGLVYNFIWISISLVGGVLVSLVCLRQTDLKALIAYSSV 278
Cdd:PRK12561 205 HTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVqMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSV 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 279 SHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMP-SMALwwFLLSS-ANMAA 356
Cdd:PRK12561 285 SHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPkTFAL--FTASSmASLAL 362
|
330
....*....|....*...
gi 1935448367 357 PPTMNLLGEISLLNSIVS 374
Cdd:PRK12561 363 PGMSGFVSELTVFLGITS 380
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
48-367 |
7.51e-26 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 109.79 E-value: 7.51e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 48 LSYFMGCDLISYGMVLL-SLWICTLMLLASESIYKNNNYSSFFVLNVLFLLLFLYltfsSMNLFMFYLFFESSLIPTLFL 126
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLnSLLTLIAIYSSDESIQRPRFYYSLLLLLNAGVSGAFL----AQDLLLFFLFYELELIPLYLL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 127 ILGWGYQpERLQAGVYLLFYTLFGSLPMLISIF----------FLYDSMNTMNFYLMTgsygNELLYISMIFAFLVKMPM 196
Cdd:PRK06473 147 IAIWGGQ-RRGYAATKFLLYTAISGILILVSFLglvwlsgassFDYEPLRSHTLPLST----QLLLLAPILVGFGIKIPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 197 FLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIWISISLVGGVLVSLVC-LRQTDLKALIAY 275
Cdd:PRK06473 222 VPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCaIAQKDMKKMVAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 276 SSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMALWWFLLSSANMA 355
Cdd:PRK06473 302 SSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMA 381
|
330
....*....|..
gi 1935448367 356 APPTMNLLGEIS 367
Cdd:PRK06473 382 SAGIPGMVGFIA 393
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
45-357 |
1.57e-25 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 108.88 E-value: 1.57e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 45 WMNLSYF---MGCDLISYGMVLLSLWICTLMLLASESIYKNnnySSFFVLNVLFLLLFLYLTFSSMNLFMFYLFFESSLI 121
Cdd:CHL00011 70 WINFFDFhwrLGIDGLSIGPILLTGFITTLATLAAWPVTRN---SRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 122 PTLFLILGWGYQpERLQAGVYLLFYTLFGSLPMLISIFF--LYDSMN-TMNF-YLMTGSYGNEL---LYISMIFAFLVKM 194
Cdd:CHL00011 147 PVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGmgLYGSNEpTLNFeTLANQSYPVALeilFYIGFLIAYAVKL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 195 PMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIWISIslVGGVLV---SLVCLRQTDLKA 271
Cdd:CHL00011 226 PIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVI--VGAIQIiyaASTSLGQRNLKK 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 272 LIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMALWWFLLSS 351
Cdd:CHL00011 304 RIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSM 383
|
....*.
gi 1935448367 352 ANMAAP 357
Cdd:CHL00011 384 ASLALP 389
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
108-357 |
1.03e-22 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 100.55 E-value: 1.03e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 108 NLFMFYLFFESSLIPTLFLILGWGYQpERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNF---YLMTGSYGNE---L 181
Cdd:PRK02546 136 DMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFdmtALAAKDFGLGfqlL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 182 LYISMIFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFL-FLQSIGLVYNFIWISISLVGGVLVS 260
Cdd:PRK02546 215 CYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAgMLPDAHAQFAPLLIVLGVVNIIYAA 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 261 LVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMP 340
Cdd:PRK02546 295 LTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMR 374
|
250
....*....|....*..
gi 1935448367 341 SMALWWFLLSSANMAAP 357
Cdd:PRK02546 375 KMFAMWTACSLASLALP 391
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-393 |
1.33e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 99.95 E-value: 1.33e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 108 NLFMFYLFFESSLIPTLFLIlGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLMTGSY-GNELLYISM 186
Cdd:PRK08375 127 DLFNLFVFLEIMSLSSYALV-AMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALaENPTVVTAF 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 187 IFAFL---VKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLR----VFLFLQSIGLVYNFIWISISLVGGVLV 259
Cdd:PRK08375 206 GFVLLalaLKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRiyftVFGGDFRFALGLGWLLAVLALLSMLVG 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 260 SLVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFM 339
Cdd:PRK08375 286 SLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRM 365
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1935448367 340 PSMALWWFLLSSANMAAPPTMNLLGEISLLNSIVS-WSWLTMLMLSFVSFFGAAY 393
Cdd:PRK08375 366 PLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
48-364 |
2.75e-21 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 95.93 E-value: 2.75e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 48 LSYFMGCDLISYGMVLLSlwiCTLMLLASESIYKNNNYSSFFVLNVLFLLLFLYLTFSSMNLFMFYLFFESSLIPTLFLI 127
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLN---SLLTWIAIYSIGENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 128 LGWGYQpERLQAGVYLLFYTLFGSLPMLISIF----------FLYDSMNTMNFYLMTgsygNELLYISMIFAFLVKMPMF 197
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLgivwlsgstsFDYDAISTQNLSLNT----QLILLTGLLLGFGIKIPLV 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 198 LVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLR--VFLFLQSIGLVYN--FIWISISLVGGvlvSLVCLRQTDLKALI 273
Cdd:PRK07363 223 PLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRfgLQLFPQTWSLVAPglAIIGTISVIYG---ALSAIAQKDIKRMV 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 274 AYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMALWWFLLSSAN 353
Cdd:PRK07363 300 AYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAG 379
|
330
....*....|.
gi 1935448367 354 MAAPPTMNLLG 364
Cdd:PRK07363 380 MASAGIPGLVG 390
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
108-390 |
1.88e-16 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 80.74 E-value: 1.88e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 108 NLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLMTGSYGNELL-YISM 186
Cdd:MTH00062 92 NSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSVSLIvYYVL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 187 IFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSiglVYNFIWISISLVGGVLVSLVCLRQ 266
Cdd:MTH00062 172 SFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFS---GSFLGYLFLCCLFSVFFLITACSE 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 267 TDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMaLWW 346
Cdd:MTH00062 249 LDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVL-RVI 327
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1935448367 347 FLLSSANMAA-PPTMNLLGEISLLnSIVSWSWLTMLMLSFVSFFG 390
Cdd:MTH00062 328 VVFSFLSLCSfPPTIQFFCEVFLV-SSSFGVLVYLLFWCFYLFFG 371
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-361 |
1.12e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 78.86 E-value: 1.12e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 55 DLISYGMVLLSLWICTLMLLASESIYKNNNYSSFFVLNVLFLLLFLYLTFSSMNLFMFYLFFESSLIPTLFLILGWGYQP 134
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 135 ERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMN------------FYLMTGSYGNELLYIS-----MIFAFLVKMPMF 197
Cdd:PRK12667 161 DAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNmadlsakirglsFPLTGGLAGNPPLALGvalalALWAFTIKAAIF 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 198 LVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVF-------LFLQSIGLVYNFIWISISLVGGVLVSLVCLRQTDLK 270
Cdd:PRK12667 241 PNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVK 320
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 271 ALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMALwWFLLS 350
Cdd:PRK12667 321 RLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASF-AFLIG 399
|
330
....*....|.
gi 1935448367 351 SANMAAPPTMN 361
Cdd:PRK12667 400 ALSLVGIPPLN 410
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-394 |
1.58e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 75.54 E-value: 1.58e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 106 SMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLfGSLPMLISIFFLYDSMNTMN----FYLMTGSYGNEL 181
Cdd:PRK12662 129 SNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTI-GATFYLIGIGFLYAITGTLNmgdmFLIIQDLPTNRA 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 182 LYISMIFAFL---VKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVF--LFLQS---IGLVYNFIWISISL 253
Cdd:PRK12662 208 IQIGVLFIMVglfIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydVFKANfvfTTLPFNNVFMILAA 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 254 VGGVLVSLVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLAN-ISYeRLGSRSLLIN 332
Cdd:PRK12662 288 LAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGsISY-HFGTTKLEDC 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1935448367 333 KGLLNFMPSMALWWFLLSSANMAAPPTMNLLGEISLLNSIV-SWSWLTMLMLSFVSFFGAAYT 394
Cdd:PRK12662 367 LNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIkSNAWIGLVVLLVGSGLSVIYV 429
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-323 |
4.25e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 70.75 E-value: 4.25e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 106 SMNLFMFYLFFESSLIPTlFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFylmTGSYGNELLYIS 185
Cdd:PRK07234 113 CADLISLYVALEVLSIAT-FLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAF---SGLATADPEAFA 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 186 MIFA-FLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIWISISLVGgvlvSLVCL 264
Cdd:PRK07234 189 LIALgLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFAL 264
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1935448367 265 RQTDLKALIAYSSVSHMGIVLSGLMTmtywgvcgAYVLMIAHGLCSSGLFCLANISYER 323
Cdd:PRK07234 265 LEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLCAGALPSR 315
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
106-389 |
1.70e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 69.37 E-value: 1.70e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 106 SMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLMTGSYGNE-LLYI 184
Cdd:PRK08667 130 SANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILsLVFL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 185 SMIFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIWISISLVGGVLVSLVCL 264
Cdd:PRK08667 210 LLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYAL 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 265 RQTDLKALIAYSSVSHMGIVLS-----------GLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINK 333
Cdd:PRK08667 290 KEHDLKGLLAYSSIENIGIILMgiglyvifgvyGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMG 369
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1935448367 334 GLLNFMPSMALWWFLLSSANMAAPPTMNLLGEISLLNSI-----VSWSWLTMLMLSFVSFF 389
Cdd:PRK08667 370 GLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFfqsfsVADPLIKILLFSVLAIF 430
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
108-361 |
1.14e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 66.66 E-value: 1.14e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 108 NLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNF-YL-----MTGSYGNEL 181
Cdd:PRK08376 142 DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMaYLavkmsENPTVVAKI 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 182 LYISMIFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVF-LFLQSIGLV----YNFIWISISLVGG 256
Cdd:PRK08376 222 ALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLVIKQAGLYALARVLFsIYGPAINLAtvgwVIIILGCLTMFVG 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 257 VLVSLVclrQTDLKALIAYSSVSHMGIVLSGL---------MTMTYWG---VCGAYVLMIAHGLCSSGLFCLANISYERL 324
Cdd:PRK08376 302 VAMAVV---QKDVKRLLAYHSVSQIGYMLLGLgvglaalgdPAMASYGeiaLAGGIYHIVNHALYKALLFLTAGAVIYET 378
|
250 260 270
....*....|....*....|....*....|....*..
gi 1935448367 325 GSRSLLINKGLLNFMPsMALWWFLLSSANMAAPPTMN 361
Cdd:PRK08376 379 GTRNLNELGGLARTMP-KTTIAFLIGAAAIVGLPPFN 414
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
106-314 |
2.04e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 65.79 E-value: 2.04e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 106 SMNLFMFYLFFESSLIPTLFLILgWGYQPERLQAGVYLLFyTLFGSLPMLISIFFLYDSMNTMNF------YLMTGSYGN 179
Cdd:PRK08668 117 ANDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVL-SAIGAYAMLYAIFLIYAKTGTFDFadisqgLINDTSTGF 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 180 ELLYISMIFAF-LVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIWIS-------- 250
Cdd:PRK08668 195 ALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVLPGTKLFSEFGTYRgvplfnyi 274
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1935448367 251 ISLVGGVLV---SLVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLF 314
Cdd:PRK08668 275 LAWLGNISIivgTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
106-397 |
3.69e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 65.16 E-value: 3.69e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 106 SMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLY--DSMNTMNFYL-MTGSYGNELL 182
Cdd:PRK12646 129 SDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYimTGTNNITEILgQADHIKNHGL 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 183 YISMIFAFLV----KMPMFLVHLWLPSAhVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIWISISLVGGVL 258
Cdd:PRK12646 209 FIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLF 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 259 VSLVCLRQTDLKALIAYSSVSHMGIVLS------GLMTMTYWGVCGAYVL--------MIAHGLCSSGLFCLANISYERL 324
Cdd:PRK12646 288 GSITALKQWDLKGILAYSTISQLGMIMAmvgiggGYAQHQQDAIASIYVFvlfaalfhLMNHAIFKCALFMGVGIIDHEA 367
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 325 GSRSLLINKGLLNFMPSMALwWFLLSSANMAAPPTMN-LLGEISLLNSIVSWSWLTMLMLSFV----------SFFGAAY 393
Cdd:PRK12646 368 GTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLNgFLSKEMFLDALTQTGQLSQFSLISMiiivfigviaSIFTFTY 446
|
....
gi 1935448367 394 TLYM 397
Cdd:PRK12646 447 ALYM 450
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
150-436 |
1.71e-10 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 62.86 E-value: 1.71e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 150 GSLPMLISIFFLYDSMNTMN------FYLMTGSYGNELLYISMIFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILL 223
Cdd:PRK08377 170 GSSFFLIGVALIYGATGTLNmahiaqLAGTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVV 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 224 KLGGYGLLRVFLFLQSIGLVYNFIW--ISISLVGGVLVSLVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYV 301
Cdd:PRK08377 250 KAGLYAMARILYLMQNANGWSSVLKlvIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVF 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 302 LMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMALWWFLLSSANMAAPPTMNLLGEISLLNSIVS--WSWLT 379
Cdd:PRK08377 330 HMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSagYTWPV 409
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1935448367 380 MLMLsFVSFFGAAYtlymYAYSQHGKLFSGlysiSGGSSREYLLLFLHWFPLNLLIL 436
Cdd:PRK08377 410 ALVL-GASVVEAVY----YFRLIHTMWFKG----EGERIRENAAIGIILLLLAALIV 457
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
186-397 |
2.24e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 62.46 E-value: 2.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 186 MIFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQ--SIGLVYNFIWISISLVGGVLVSLVC 263
Cdd:PRK08676 212 IFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRqsGAAEQFSNVLIGLGIFSIAVAAFSM 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 264 LRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMA 343
Cdd:PRK08676 292 LSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAA 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 1935448367 344 LWWFLLSSANMAAPPTMNLLGEISLLNSIVSWS-WLTMLMLSFVSFFGAAYTLYM 397
Cdd:PRK08676 372 WGVILGSAAIIGMPPFPLFLSKFFILLQLGGISvWLVLAVLLLLLLAASSFAIFL 426
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
184-391 |
2.75e-10 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 62.25 E-value: 2.75e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 184 ISMIFAFLV-----KMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVF-LFLQSIG-LVYNFIWISISLVGG 256
Cdd:PRK06458 213 MKLAFVFLLigfgtKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYiLIDAAIGsDFPGRLLLIFGLLSV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 257 VLVSLVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLL 336
Cdd:PRK06458 293 LVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLL 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1935448367 337 NFMPSMAlWWFLLSSANMA-APPTMNLLGEISLLNSIVS---WSWLTMLMLSFVSFFGA 391
Cdd:PRK06458 373 KVSPLTG-WGLMLGALAIAgMPPFGVFISEFLILTAGLArgpLLIAILLLLLLTLAFAA 430
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-369 |
1.40e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 59.98 E-value: 1.40e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 109 LFMFYLFFESSLIPTlFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLMTGSYGN------ELL 182
Cdd:PRK12665 133 LFNLYVGFEILLVAS-YVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDElpsgtrTAL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 183 YISMIFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRV-FLFLQSIGLVYNFIWISI-SLVGGVLVS 260
Cdd:PRK12665 212 FAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRThTLLFPGGGLDTLLMVVALlTMVVGILGA 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 261 LVclrQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMP 340
Cdd:PRK12665 292 IA---QSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASP 368
|
250 260 270
....*....|....*....|....*....|
gi 1935448367 341 SMALwWFLLSSANMAA-PPTMNLLGEISLL 369
Cdd:PRK12665 369 LLAV-LFFVPALNLGGiPPFSGFIGKVALL 397
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-395 |
4.00e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 58.29 E-value: 4.00e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 50 YFMGCDLISYGMVLLS----LWICTLMLLASESIYKNNNYSSFFVLNVLFLLLFLYLTFSSMNLFMFYLFFESSLIPTLF 125
Cdd:PRK06589 75 YSIGLHLEPLGLIFLLligfLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAF 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 126 LIlGWGYQPERLQAGVYLLFYTLFGSLPM-LISIFFLYDSMNTMNFYLMTGSYGNELLYISMIFAF-LVKMPMFLVHLWL 203
Cdd:PRK06589 155 LI-GHTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYgIAKTAIFPVHSWL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 204 PSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIG----LVYNFIW-ISISLVGGVLVSLVCLRQTDLKALIAYSSV 278
Cdd:PRK06589 234 PAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSylqrIFAEFNWlIFIPIVSIFYSSLKALKTDNIKKILAYSTI 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 279 SHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPSMALWWFLLSSANMAAPP 358
Cdd:PRK06589 314 SQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPI 393
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1935448367 359 TMNLLGEISLL-----NSIVSWSWLTMLMLSFVSFFGAAYTL 395
Cdd:PRK06589 394 FSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLL 435
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
193-367 |
7.77e-09 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 58.13 E-value: 7.77e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 193 KMPMFLVHLWLPSAHVEA-PVS-----GSMILAGillklggygllrVFLFLQSIGL-----VYNFIWISISLVGGVLVSL 261
Cdd:PRK12650 221 KSAQFPFHFWLPEAMAAItPVSaflhaAAVVKAG------------IYLLLRFSPVfhdvaVWNWLLIIVGMITALMGAV 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 262 VCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNFMPs 341
Cdd:PRK12650 289 FAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMP- 367
|
170 180
....*....|....*....|....*..
gi 1935448367 342 MALWWFLLSSANMAA-PPtmnLLGEIS 367
Cdd:PRK12650 368 FTFVSVTIAALSMAAvPP---LFGFVS 391
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
105-398 |
3.25e-08 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 55.51 E-value: 3.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 105 SSMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNF-----YLMTGSYGN 179
Cdd:COG1007 120 SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLagiaaALAAGGANS 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 180 ELLYISMIF---AFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFL-FLQSIGLVYNFIWISISLVG 255
Cdd:COG1007 200 PLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVeAFPGLAADWQLLLAVLAVLS 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 256 GVLVSLVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLF-CLANISYERLGSRSLLINKG 334
Cdd:COG1007 280 MTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAG 359
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1935448367 335 LLNFMPSMALWW--FLLSSANMaaPPTMNLLGEISLLNSIVS--WSWLTMLMLSFvSFFGAAYTL----YMY 398
Cdd:COG1007 360 LARRSPLLALAMtiFLLSLAGI--PPTAGFFGKFYVFSAAVEagLYWLAVIAVLN-SVISAYYYLrvvkAMY 428
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
109-358 |
3.90e-08 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 55.34 E-value: 3.90e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 109 LFMFYLFFESSLIPTlFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLMTGS-----YGNELLY 183
Cdd:PRK12663 130 LFNLYVWFEVMLIAS-FVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRlndmgDTATLTT 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 184 ISMIF--AFLVKMPMFLVHlWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVF--LFLQSIGLVYNFIWIS--ISLVGGV 257
Cdd:PRK12663 209 IALLFllAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFtlLFPQERELLHPLLATMaaITMVIGA 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 258 LVSLVclrQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLN 337
Cdd:PRK12663 288 LGALA---YKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYR 364
|
250 260
....*....|....*....|.
gi 1935448367 338 FMPSMALWWFLLSSANMAAPP 358
Cdd:PRK12663 365 KEPLFGALFLILIFAIGGLPP 385
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
149-314 |
9.44e-08 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 54.06 E-value: 9.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 149 FGSLPMLISIFFLYDSMNTMNF-----YLMTGSYGNELLYISMIF---AFLVKMPMFLVHLWLPSAHVEAPVSGSMILAG 220
Cdd:PRK05777 165 LASGFLLYGMSLLYGATGSLSFagiakALADGSGNSLLLLFGLVFllvGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLAT 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 221 ILLKLGGYGLLRVFL--FLQSIGLVYNFIWIsISLVGGVLVSLVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCG 298
Cdd:PRK05777 245 APKIAAFAVLLRLLVvaFGGLSEDWQQVLAI-IAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSA 323
|
170
....*....|....*.
gi 1935448367 299 AYVLMIAHGLCSSGLF 314
Cdd:PRK05777 324 VLFYLLAYLFMTLGAF 339
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
106-361 |
3.02e-07 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 52.58 E-value: 3.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 106 SMNL-------FMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLM----- 173
Cdd:PRK06521 125 SMVLvlladdaFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMraahl 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 174 TGSYGNeLLYISMIFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRV-FLFLQSIGLVYNFIWISIS 252
Cdd:PRK06521 205 SPFWAS-LVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVvFDLLGAPGWWWGVLVLALG 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 253 LVGGVLVSLVCLRQTDLKALIAYSSVSHMGIVL-----------SGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISY 321
Cdd:PRK06521 284 AISAVLGVLYALAEHDLKRLLAYSTIENIGIIFvglglamvfiaYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVL 363
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1935448367 322 ERLGSRSLLINKGLLNFMPSMAlWWFLLSSANMAAPPTMN 361
Cdd:PRK06521 364 HATGTRDMEKLGGLIRRMPWTA-WAFLIGCLAISALPPLN 402
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
108-398 |
1.55e-06 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 50.54 E-value: 1.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 108 NLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNF---YLMTGSYGNELLYI 184
Cdd:COG1009 132 NLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFselLAAAPTILSSPLLT 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 185 SMIFAFLV----KMPMFLVHLWLPSAhVEAP--VS-----------GSMILAgillklggygllRVFLFLQSIGLVYNFI 247
Cdd:COG1009 212 LILLLLLLgafgKSAQFPLHFWLPDA-MEGPtpVSallhaatmvkaGVYLLA------------RLSPLFALSPVWLTVV 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 248 wISISLVGGVLVSLVCLRQTDLKALIAYSSVSHMgivlsGLMTMTYwGVcGAYV----LMIAHGLCSSGLFCLANISYER 323
Cdd:COG1009 279 -AIIGAITALFAALIALAQTDIKRVLAYSTVSQL-----GYMFLAL-GV-GAYVaalfHLLTHAFFKALLFLGAGSVIHA 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1935448367 324 LGSRSLLINKGLLNFMPSMAlWWFLLSSANMAA-PPTMNLLGEISLLNSIV---SWSWLTMLMLSFVSFFGAAYTLYMY 398
Cdd:COG1009 351 TGTRDIRKMGGLRKKMPITA-ITFLIGALSLAGiPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLF 428
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
106-364 |
2.72e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 49.92 E-value: 2.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 106 SMNLFMFYLFFESSLIPTLFLIlgwGYQPER-------LQAgvylLFYTLFGSLPMLISIFFLYDSMNTMNFYLMTGSyG 178
Cdd:PRK12647 114 SDNLITLFVFWELTSITSFLLI---GFNHEReaarraaLQA----LLVTGGGGLALLAGLILLGNVTGTYSLSELLAS-G 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 179 NEL----LYISMIFAFLV----KMPMFLVHLWLPSAhVEAPV-------SGSMILAGillklggygllrVFL---FLQSI 240
Cdd:PRK12647 186 DVIrehpLYLAILLLVLGgaftKSAQFPFHFWLPNA-MEAPTpvsaylhSATMVKAG------------IYLlarLNPVL 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 241 GLVYnfIW-ISISLVGG---VLVSLVCLRQTDLKALIAYSSVSHMGIV--LSGLMTMTywGVCGAYVLMIAHGLCSSGLF 314
Cdd:PRK12647 253 GGTP--LWqTILPLFGGltmLTGALLAVRQTDLKLILAYSTVSALGTLvmLLGLGSEL--AIKAAVLFLVAHSLYKGALF 328
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1935448367 315 CLANISYERLGSRSLLINKGLLNFMPSMALwWFLLSSANMAA-PPTMNLLG 364
Cdd:PRK12647 329 MVAGIIDHETGTRDITKLGGLRRAMPITAA-AALLAALSMAGlPPLFGFLA 378
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
137-314 |
4.77e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 49.09 E-value: 4.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 137 LQAGVYL----LFYTLFGSLPMLISIffLYDSMNTMNFYLMTGSYGnellYISMIFAFLVKMPMFLVHLWLPSAHVEAPV 212
Cdd:MTH00198 258 MSSGFYLfgcaLYFGFTGNEGMLGTI--LSATLETTNIELRQGSLG----YLFITVAILFKLAAAPFHMWTPDVYEGAPT 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 213 SGSMILAGILLKLggygllrVFLFLQSIgLVYNFIWISISLVGGVLVSLVCLRQTDLKALIAYSSVSHMGIVLSGLMTMT 292
Cdd:MTH00198 332 PTTALIAIIPKFT-------VYILLTSL-VITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGT 403
|
170 180
....*....|....*....|..
gi 1935448367 293 YWGVCGAYVLMIAHGLCSSGLF 314
Cdd:MTH00198 404 YESLQASWTYAVTYLVSALASF 425
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-358 |
5.40e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 48.41 E-value: 5.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 109 LFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFyTLFGSLPMLISIFFLYDSMNTMNFY-----LMTGSYGNE--- 180
Cdd:PRK07691 130 IFNLFVFFEVMLMASYVLIVIGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMAdisvkIAELSAGQTgli 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 181 -LLYISMIFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVF--LFLQSIGLVYNFIWIsISLVGGV 257
Cdd:PRK07691 209 tVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFtlFFSHDTSFTHYLILI-LALLTII 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 258 LVSLVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLN 337
Cdd:PRK07691 288 FGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIK 367
|
250 260
....*....|....*....|.
gi 1935448367 338 FMPSMAlWWFLLSSANMAAPP 358
Cdd:PRK07691 368 RYPVLG-WMFFIAALSLAGIP 387
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
106-358 |
8.78e-06 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 48.05 E-value: 8.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 106 SMNLFMFYLFFESSLIPTLFLIlGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLMTGSYGNE--LLY 183
Cdd:PRK06525 132 SSTLLGLLLFFEITGLCSWALI-SYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLkyLVF 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 184 ISMIFAFLVKMPMFLVHLWLPSAhVEAPVSGSMIL-AGILLKLGGYGLLRVFLFLQSIGLVYNFIWISISLVGGVLVSLV 262
Cdd:PRK06525 211 LGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLM 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 263 CLRQTDLKALIAYSSVSHMGIVLSGLMTMTY---WGVCGAYVLMIAHGLCSSGLFCLAN-ISYErLGSRSLLINKGLLNF 338
Cdd:PRK06525 290 YLPQQDMKRLLAYSTITQLGYMFFGLSLAILgsrLALEGSIAYIFNHAFAKSLFFLVAGaLSYS-CGTRLLPRLRGVLKK 368
|
250 260
....*....|....*....|
gi 1935448367 339 MPSMALWWFLLSSANMAAPP 358
Cdd:PRK06525 369 LPLVGVGFCVAALAITGVPP 388
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
108-397 |
3.13e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 46.18 E-value: 3.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 108 NLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLFGSLpMLISIFFLYDSMNTMNF----YLMTGSYGNELLY 183
Cdd:PRK06277 121 DIFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSI-LLLGIGFLLASTGTLNItdihNALLVNPTSPVIY 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 184 IS---MIFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLGGYGLLRVFLFLQSIGLVYNFIW--ISISLVGGVL 258
Cdd:PRK06277 200 GGlllLIFGLLYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIFKLFGGLSYFPSAQGvlIALSVLAMVF 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 259 VSLVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLFCLANISYERLGSRSLLINKGLLNF 338
Cdd:PRK06277 280 GVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPV 359
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1935448367 339 MPSMALwWFLLSSANMAAPPTMN------LLGEISLLNSIVSWSWLtMLMLS---FVSFFGAAYTLYM 397
Cdd:PRK06277 360 MPVVAF-MVLCAKLAISGVPPFNgfqsklMLAQAAMQANMPELAII-MIIVSigtFVSMMKAFYLIYL 425
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
108-396 |
4.04e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 46.07 E-value: 4.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 108 NLFMFYLFFEsslIPTLFLILGWGYQPER-------LQAgvylLFYTLFGSLPMLISIFFLYDSMNTMNF-----YLMTG 175
Cdd:PRK12644 127 NLLLLYVFWE---LTTVLSFLLIGHYAERaasrraaLQA----LLVTTAGGLAMLVGIIILGQAAGTYRLsellaDPPTG 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 176 SYGNELLYISMIFAfLVKMPMFLVHLWLPSAhVEAP--VSG-----SMILAgillklggygllrvflflqSIGLVYNF-- 246
Cdd:PRK12644 200 PAVSVAVVLILVGA-LSKSAIVPFHFWLPGA-MAAPtpVSAylhaaAMVKA-------------------GIYLVARLap 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 247 ------IWISISLVGGVLVSLV----CLRQTDLKALIAYSSVSHMG--IVLSGLMT--MTYWGVcgayVLMIAHGLCSSG 312
Cdd:PRK12644 259 gfadvpVWRPTVLVLGLATMLLggwrALRQHDLKLILAYGTVSQLGflTVLVGIGTrdAALAGL----AMLLAHALFKAA 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 313 LFCLANISYERLGSRSLLINKGLLNFMPSMAlWWFLLSSANMAA-PPTMNLLGEISLLNSIV---SWSWLTMLMLSFV-- 386
Cdd:PRK12644 335 LFLVVGIIDHSTGTRDIRKLSGLGRRQPVLA-VVAALAAASMAGlPPLLGFVAKEAALEAVLhdgALGPAGPVVLAGIvl 413
|
330
....*....|.
gi 1935448367 387 -SFFGAAYTLY 396
Cdd:PRK12644 414 gSILTVAYSLR 424
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
42-84 |
6.63e-05 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 42.13 E-value: 6.63e-05
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 1935448367 42 SNYWMNLSYFMGCDLISYGMVLLSLWICTLMLLASESIYKNNN 84
Cdd:pfam01059 47 NFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILASQKHLKSEP 89
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
106-288 |
6.94e-05 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 45.30 E-value: 6.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 106 SMNLFMFYLFFESSLIPTlFLILGWGYQPERLQAGVY-LLFYTLFGSLPMLISIFFLYdsmntmnfyLMTGSY------- 177
Cdd:PRK12645 129 SDNLIVLYLFWELTSISS-FLLISYWYEREASRYGAQkSMLITVFGGLSMLGGFILLY---------IMTGSFsiremia 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 178 ------GNELLYISMIFAFL---VKMPMFLVHLWLPSAhVEAPV-------SGSMILAGILLklggygllrVFLFLQSIG 241
Cdd:PRK12645 199 nadeiqNSPLFIPAMILILLgafTKSAQFPFYIWLPDA-MEAPTpvsaylhSATMVKAGIYL---------VARFTPIFA 268
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1935448367 242 LVYNFIWIsISLVGGVLV---SLVCLRQTDLKALIAYSSVSHMGIVLSGL 288
Cdd:PRK12645 269 GSQVWFWT-VTLVGLITLfwgSLNAVKQTDLKGILAFSTVSQLGLIMSLL 317
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
105-314 |
1.64e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 43.85 E-value: 1.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 105 SSMNLFMFYLFFESSLIpTLFLILGWGYQPER-LQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNF----YLMTGSYGN 179
Cdd:MTH00199 115 SSINWLSIYLAIELQTL-TLFILVALKRDSAYsTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginSILTGDVGK 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 180 ELLYISMIFaflvKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLggygllrVFLFLQSIGLVYNFIWIS--ISLVGGv 257
Cdd:MTH00199 194 ILITISLLF----KLSAAPFHMWAPDVYEGAPTITTALLATVPKIG-------VFSILVQIGPVTNVVLICavLSIIYG- 261
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1935448367 258 lvSLVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSSGLF 314
Cdd:MTH00199 262 --AIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIMSICSF 316
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
106-413 |
3.73e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 42.89 E-value: 3.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 106 SMNLFMFYLFFESSLIPTLFLILGWGYQPERLQAGVYLLFYTLFGSLPMLISIFFLYDSMNTMNFYLMTGS-------YG 178
Cdd:PRK12649 130 SGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDselieniKG 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 179 NELLYISMIFAFL---VKMPMFLVHLWLPSAhVEAPVSGSMIL-AGILLKLGGYGLLRVFLFLQsiGLVYNFIWIS-ISL 253
Cdd:PRK12649 210 HPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPIFS--GTEAWFILVSgTGM 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 254 VGGVLVSLVCLRQTDLKALIAYSSVSHmgivLSGLMTMTYW--------GVCGAYVLMIAHGLCSSGLFCLANISYERLG 325
Cdd:PRK12649 287 ITMVLAGFLAFRQTDIKAILAYSTISQ----LAYLMTMYGYttyhepglGVAAATFHLLNHATFKACLFLVAGIVAHEAA 362
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 326 SRSLLINKGLLNFMPSMALWWFLLSSANMAAPPtmnllgeislLNSIVSWSWLTMLMLSFVSFFGAAYTLYMYAYSQHGK 405
Cdd:PRK12649 363 TRDIRKLGGLRKEMPITFIVASIAALAMAGIPP----------LNGFLSKEMFYETSVEMGALIGGPFTIIIPAVAVLGG 432
|
....*...
gi 1935448367 406 LFSGLYSI 413
Cdd:PRK12649 433 VFTFAYSI 440
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
149-314 |
8.06e-04 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 41.47 E-value: 8.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 149 FGSLPMLISIFFLYDSMNTMNF-----YLMTGSYGNELLYISMIF---AFLVKMPMFLVHLWLPSAHVEAPVSGSMILAG 220
Cdd:TIGR01770 164 FSSGLLLFGISLIYGFTGSLNFedlllFLSNGMLNISLLLLGIVLilvGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSI 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 221 ILLKLGGYGLLRVFLFLQSIGLVYNFIWISISLVGGVLV-SLVCLRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGA 299
Cdd:TIGR01770 244 VPKIAIFAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIgNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAV 323
|
170
....*....|....*
gi 1935448367 300 YVLMIAHGLCSSGLF 314
Cdd:TIGR01770 324 LFYIFIYALMSLGAF 338
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
183-395 |
1.83e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 40.40 E-value: 1.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 183 YISMIFAFLVKMPMFLVHLWLPSAHVEAPVSGSMILAGILLKLggygllrVFLFLQSIGLVYNFIWIS--ISLVGGVLVS 260
Cdd:MTH00196 98 YLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLG-------IFSILVSIGLNVNILLIGglFSLFVGAIGA 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 261 LvclRQTDLKALIAYSSVSHMGIVLSGLMTMTYWGVCGAYVLMIAHGLCSsglFCLANISYERLGSRSLLIN-KGLLNFM 339
Cdd:MTH00196 171 L---NQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMS---ICVFSIILALNVYKNLIIEfSGLSRRL 244
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1935448367 340 PSMALWWFLLSSANMAAPPTMNLLGE-ISLLNSIVSWSWLTMLMLSFVSFFGAAYTL 395
Cdd:MTH00196 245 PILAITLALTFLSIAGIPPLVGFLGKwLILLSGVVYQYYLIFLLAVFCSVIAGVYYV 301
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
253-395 |
5.01e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 39.40 E-value: 5.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 253 LVGGV-LVSLV-----CLRQTDLKALIAYSSVSHMgivlsGLMTM-----TYWGVCGAYVLMIAHGLCSSGLFCLANISY 321
Cdd:PRK12648 273 IVGGAgLITLLlgayfALFQHDLKGLLAYSTISHL-----GLITLllglgSPLAAVAAIFHIINHATFKASLFMAAGIID 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1935448367 322 ERLGSRSLLINKGLLNFMPSMALwWFLLSSANMAAPPTMN-------LLGEISLLNSIVSWSWLTMLMLSFVSFFGAAYT 394
Cdd:PRK12648 348 HETGTRDMRRLSGLRRLMPITAT-LAMVAAAAMAGVPLLNgflskemFFAETLDTHLLGSLDWLLPVAATLAGAFSVAYS 426
|
.
gi 1935448367 395 L 395
Cdd:PRK12648 427 L 427
|
|
| |
