|
Name |
Accession |
Description |
Interval |
E-value |
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
1-387 |
0e+00 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 736.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 1 MAITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYG 80
Cdd:CHL00049 108 MAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVYGFSWLYG 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 81 SSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRI 160
Cdd:CHL00049 188 LSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRI 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 161 FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMNL 240
Cdd:CHL00049 268 FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNL 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 241 GTFACIILFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVLS 320
Cdd:CHL00049 348 GTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVIS 427
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1869255417 321 IYYYLKIIKLLMTGRNQEITPHVRNYRKSPLRSNNSIELSMIVCVIASTIPGISMNPIIAIAQDTLF 387
Cdd:CHL00049 428 IYYYLKIIKLLMTGRNQEITPYVRNYRRSPLRSNNSIELSMIVCVIASTIPGISMNPIIAIAQDTLF 494
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
2-386 |
2.84e-148 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 429.47 E-value: 2.84e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 2 AITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGS 81
Cdd:PRK02504 108 PLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGL 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 82 SGGEIELQEIVNGLINTQmynSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIF 161
Cdd:PRK02504 188 SGGSTQLSAIALALITSP---SLGLALALVFVIAGIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRLL 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 162 DIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVgDSNGGYASMITYMLFYISMNLG 241
Cdd:PRK02504 265 VTAFPSFDEQWKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVA-GTEAGYASMVFYLLAYLFMNLG 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 242 TFACIILFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVLSI 321
Cdd:PRK02504 344 AFACVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISI 423
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1869255417 322 YYYLKIIKLLMTGRNQEITPHVRNYRK--------SPLRsnnsieLSMIVCVIASTIPGISMNPIIAIAQDTL 386
Cdd:PRK02504 424 YYYIRVIKMMVVKEPQEMSDVVKNYPEinwnlpgmRPLR------VGLVLCVIATALAGILSNPLFTLANTSV 490
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
5-383 |
7.05e-105 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 317.44 E-value: 7.05e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 5 EFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGg 84
Cdd:COG1007 103 EFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATG- 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 85 EIELQEIVNGLiNTQMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIP 164
Cdd:COG1007 182 SLNLAGIAAAL-AAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEA 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 165 FYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIgqigyviigiivgdSNGGY-------------ASMITY 231
Cdd:COG1007 261 FPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSI--------------AHAGYlllglaagtplgvSAALFY 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 232 MLFYISMNLGTFACIILFGLR-TGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLV 310
Cdd:COG1007 327 LLAYLFMNLGAFAVILLLSRKgGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLA 406
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1869255417 311 SIGLLTSVLSIYYYLKIIKLLMTGRNQEitphvrnyrKSPLRSNNSIELSMIVCVIASTIPGISMNPIIAIAQ 383
Cdd:COG1007 407 VIAVLNSVISAYYYLRVVKAMYFDEPEE---------EAPISAPPGLRVALVIAALLVLLLGIFPGPLLDLAA 470
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
3-383 |
2.14e-91 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 282.87 E-value: 2.14e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 3 ITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSS 82
Cdd:PRK05777 102 RGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGAT 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 83 GGeIELQEIVNGLINTQMyNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFD 162
Cdd:PRK05777 182 GS-LSFAGIAKALADGSG-NSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLV 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 163 IPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNgGYASMITYMLFYISMNLGT 242
Cdd:PRK05777 260 VAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAE-GYSAVLFYLLAYLFMTLGA 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 243 FACIILFGLRTG-TDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVLSI 321
Cdd:PRK05777 339 FGVISLLRRKGGeAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGA 418
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1869255417 322 YYYLKIIKLLMtgRNQEITPHVRNYRKSPLRsnnsieLSMIVCVIASTIPGISMNPIIAIAQ 383
Cdd:PRK05777 419 FYYLRVIKLMY--FDEPPRDAPVNWPLSAGG------AVLSVSALLVLVLGIFPQPLLDLAA 472
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
5-331 |
6.97e-69 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 224.44 E-value: 6.97e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 5 EFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGg 84
Cdd:TIGR01770 103 EFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTG- 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 85 EIELQEIVNGLiNTQMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIP 164
Cdd:TIGR01770 182 SLNFEDLLLFL-SNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYI 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 165 FYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMItYMLFYISMNLGTFA 244
Cdd:TIGR01770 261 LFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLF-YIFIYALMSLGAFG 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 245 CIIL--FGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVLSIY 322
Cdd:TIGR01770 340 VLSLlrSYKDEWIEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAF 419
|
....*....
gi 1869255417 323 YYLKIIKLL 331
Cdd:TIGR01770 420 YYLRVVKVM 428
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-317 |
6.85e-67 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 213.71 E-value: 6.85e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 23 ANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgEIELQEIVNGLinTQMYN 102
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTG-TLSFDELSKAL--TGGLN 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 103 SPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFL-SVTSKVAASALATRIFdiPFYFSSNEWHLLLEILAI 181
Cdd:pfam00361 78 SSGLLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYGLIRRSL--LYLPSSPFIQQILLILAI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 182 LSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDsNGGYASMITYMLFYISMNLGTFACIILFGL-RTGTDNIRD 260
Cdd:pfam00361 156 ISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGT-IYGIQAAIFHLLTHGLFSAGLFLCAGSVIYrRVHTRNIRD 234
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1869255417 261 YAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTS 317
Cdd:pfam00361 235 YGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
15-331 |
6.24e-36 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 134.77 E-value: 6.24e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 15 LGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGeIELQEIVNG 94
Cdd:MTH00196 4 LGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGG-LHLSYINLV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 95 LINTQMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAasalatrIFDIPFYFSSNEWHL 174
Cdd:MTH00196 83 LNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLG-------IFSILVSIGLNVNIL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 175 LleILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMItYMLFYISMNLGTFACIILFGlrTG 254
Cdd:MTH00196 156 L--IGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLV-YLFIYIIMSICVFSIILALN--VY 230
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1869255417 255 TDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLL 331
Cdd:MTH00196 231 KNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIVKIL 307
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
6-328 |
1.61e-34 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 132.19 E-value: 1.61e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 6 FLLFVLTATLGGMFLcgANDLITIFVAPECFSLCSYLLSGYtKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGe 85
Cdd:COG0651 111 PLFLLLLAGMNGAFL--TGDLFNLFVFFEVMLLASYGLVAL-GGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGT- 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 86 ielQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASALATRIFDIP 164
Cdd:COG0651 187 ---LNMADLAARLAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSgLLTKVGVYAILRVLTLLF 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 165 FYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIgqigyviigiivgdSNGGY---------ASMITYMLFY 235
Cdd:COG0651 264 GADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSV--------------SQIGYillglglgtPLGLAGALFH 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 236 ISMNlgTFACIILF------GLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFL 309
Cdd:COG0651 330 LLNH--ALAKALLFlaagaiERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLL 407
|
330
....*....|....*....
gi 1869255417 310 VSIGLLTSVLSIYYYLKII 328
Cdd:COG0651 408 AAVLLLSSLLTLAYFVRIF 426
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
5-331 |
2.08e-30 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 121.28 E-value: 2.08e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 5 EFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGg 84
Cdd:MTH00199 98 SSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTG- 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 85 EIELQEIVNGLIntqmynspgISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIfdip 164
Cdd:MTH00199 177 ETSIQGINSILT---------GDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQI---- 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 165 fYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMItYMLFYISMNLGTFA 244
Cdd:MTH00199 244 -GPVTN----VVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLI-YMIIYVIMSICSFS 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 245 ciILFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVLSIYYY 324
Cdd:MTH00199 318 --IILSLKLTKGLIVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYY 395
|
....*..
gi 1869255417 325 LKIIKLL 331
Cdd:MTH00199 396 VRVVQII 402
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
7-389 |
6.17e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 117.29 E-value: 6.17e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 7 LLFVLTATLGGMFLCGanDLITIFVAPECFSLCSYLLSGYTKkDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSG--G 84
Cdd:PRK08375 111 LFLLLLAGLLGALLTA--DLFNLFVFLEIMSLSSYALVAMGG-DRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGtlN 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 85 EIELQEIVNGlintqmynSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVT-SKVAASALATRIFDI 163
Cdd:PRK08375 188 MADLAGALAE--------NPTVVTAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLvTKVAVYALIRIYFTV 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 164 --PFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMItYMLFYISMNLG 241
Cdd:PRK08375 260 fgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLL-HLLHHALMKGA 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 242 TFACIILFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVLSI 321
Cdd:PRK08375 339 LFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLAL 418
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1869255417 322 YYYLKIIKLLMTGrnqeitPHVRNYRKSPLRSNNSIELSMIVCVIASTIPGISMNPIIAIAQDTLFSF 389
Cdd:PRK08375 419 LYFLRIWYRAFFG------PPPPGSEAPKQEAPLGMLAPSLALALLSLLLGIYAGPLLQLADAAAAGL 480
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
6-383 |
3.21e-25 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 106.77 E-value: 3.21e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 6 FLLFVLTATlgGMFLCGanDLITIFVAPECFSLCSYLLSGYTKkDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGE 85
Cdd:PRK08377 114 FLLLMLGAT--GMIATG--DIFNLFVFMEITAITAYALTAYNK-TGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 86 IELQeiVNGLINTQMYNSPGISIALIFItvGIGFKLSLAPSHQWTPDVYEGSPTPV-VAFLSVTSKVAASALATRIFDIP 164
Cdd:PRK08377 189 NMAH--IAQLAGTIDPTVAQVGLALLIF--GLAVEAELFPLNAWAPDAYQAAPHPItVMFSAFVVKAGLYAMARILYLMQ 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 165 FYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMItYMLFYISMNLGTFA 244
Cdd:PRK08377 265 NANGWSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVF-HMINHAIVKALLFL 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 245 CIILFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVLSIYYY 324
Cdd:PRK08377 344 AVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYY 423
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1869255417 325 LKIIKLLMTGRNQEItphvrnyrkspLRSNNSIELSMIVCVIASTIPGISMNPIIAIAQ 383
Cdd:PRK08377 424 FRLIHTMWFKGEGER-----------IRENAAIGIILLLLAALIVVIGIYPTPFWEVVQ 471
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
7-378 |
9.92e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 102.74 E-value: 9.92e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 7 LLFVLTATLGGMFLCGanDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSG--G 84
Cdd:PRK12667 118 LLLGLEAGMLGILLTG--DAFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGtlN 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 85 EIELQEIVNGLINTQMYNSPG-----ISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASALAt 158
Cdd:PRK12667 196 MADLSAKIRGLSFPLTGGLAGnpplaLGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSgLVVNVGAYAII- 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 159 RIFDIPFYFSSNE---WHLLLEILAIL---SMILGNLIAITQTSMKRMLAYSSIgqigyviigiivgdSNGGYASM---- 228
Cdd:PRK12667 275 RFLYTIFGISPSLidfRAALSPILIILgavSAIIGALMMVVQKDVKRLLAYSTI--------------SHMGYIFMgigi 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 229 -----ITYMLFYISMNlgTFACIILF---GL---RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHL 297
Cdd:PRK12667 341 gtqlgLAAALFHIINH--AIAKSLLFlasGVfihAAGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLL 418
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 298 FWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLLMTGRNQEItphvrnyRKSPLRSNNSIELSMIVCVIASTIPGISMNP 377
Cdd:PRK12667 419 FNALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPKSG-------EEVEHKESPSMSVVILVLALAVLILGILALF 491
|
.
gi 1869255417 378 I 378
Cdd:PRK12667 492 L 492
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
7-260 |
3.00e-23 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 101.47 E-value: 3.00e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 7 LLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSN--------EATMKYLLMGGASSSILVHGFSWL 78
Cdd:MTH00198 191 FALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHFpspgntppESGLKYWILGAMSSGFYLFGCALY 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 79 YGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALAT 158
Cdd:MTH00198 271 FGFTGNEGMLGTILSATLETTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLT 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 159 RIFDIPfyfssnewHLLLEIlAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMiTYMLFYISM 238
Cdd:MTH00198 351 SLVITS--------KLLLSV-AIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASW-TYAVTYLVS 420
|
250 260
....*....|....*....|....*
gi 1869255417 239 NLGTFACIIL---FGLRTGTDNIRD 260
Cdd:MTH00198 421 ALASFTVICTleeFGTRTPTSRQRD 445
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
7-206 |
1.59e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 90.16 E-value: 1.59e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 7 LLFVLTATLGGMFLCGanDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgei 86
Cdd:PRK08376 126 LILLLELGMLGMAITG--DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYG--- 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 87 elqEIVNGLINTQMYNSPGI--SIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDI- 163
Cdd:PRK08376 201 ---TLNMAYLAVKMSENPTVvaKIALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLVIKQAGLYALARVLFSIy 277
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1869255417 164 PFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSI 206
Cdd:PRK08376 278 GPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSV 320
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
6-323 |
1.98e-16 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 80.81 E-value: 1.98e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 6 FLLFVLTATLGGMFlcgANDLITIFVAPECFSLCSYLLSGYTKKDVRsnEATMKYLLMGGASSSILVHGFSWLYgSSGGE 85
Cdd:PRK08668 103 FALMSLAGVLGVFL---ANDLLTLYIFWEIMTFSSFMMVPMGKKESR--KASLKYFVLSAIGAYAMLYAIFLIY-AKTGT 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 86 IELQEIVNGLINTqmyNSPGISIALIFITVGIGF-KLSLAPSHQWTPDVYEGSPTPVVAFLS-VTSK--------VAASA 155
Cdd:PRK08668 177 FDFADISQGLIND---TSTGFALIVFLFLLAFGVaKAGIFPLHVWAPDAYSEAPQSFSAVLSgQLSKlgaygfllVLYVL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 156 LATRIF-DIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASM---ITY 231
Cdd:PRK08668 254 PGTKLFsEFGTYRGVPLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLfhvFNH 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 232 MLFYISMNLGTFACIilfgLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVS 311
Cdd:PRK08668 334 ALFKGLFFLIFAAVI----YRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAF 409
|
330
....*....|..
gi 1869255417 312 IGLLTSVLSIYY 323
Cdd:PRK08668 410 MAFFGSIGSFLY 421
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-327 |
1.51e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 78.07 E-value: 1.51e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 6 FLLFVLTATLGGMFLCGanDLITIFVAPECFSLCSYLL--SGYTKKDVRsneATMKYLLMGGASSSILVHGFSWLYGSSG 83
Cdd:PRK07691 112 PSVLFMLAGVNGAFLTG--DIFNLFVFFEVMLMASYVLivIGGTKIQLR---ESIKYVLINVVSSAFFVVAVAILYSVVG 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 84 gEIELQEIVNGLINTQMYNSPGIS-IALIFITVgIGFKLSLAPSHQWTPDVYEGSPTPVVAFL-SVTSKVAASALAtRIF 161
Cdd:PRK07691 187 -TLNMADISVKIAELSAGQTGLITvVAILFLFV-FATKAGLFPLYFWLPGSYYAPPIAIAALFgALLTKVGVYAIA-RTF 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 162 DIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGgyasmITYMLFYISMNLG 241
Cdd:PRK07691 264 TLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESG-----MIGAIYYLIHDMI 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 242 TFACIILFG----LRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTS 317
Cdd:PRK07691 339 VKAALFLLIgimiKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSS 418
|
330
....*....|
gi 1869255417 318 VLSIYYYLKI 327
Cdd:PRK07691 419 LLVLYSVIKI 428
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
7-384 |
2.83e-15 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 77.30 E-value: 2.83e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 7 LLFVLTATLGGMFLCGanDLITIFVAPECFSLCSYLLS--GYTKKDVRsneATMKYLLMGGASSSILVHGFSWLYGSSG- 83
Cdd:PRK12663 113 FILLLMAGVIGSFLTG--DLFNLYVWFEVMLIASFVLItlGQEREQLR---GAIKYVVLNLIGSWLFLLGIGLLYGTFGt 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 84 ---GEIELQeivnglINTQMYNSPGISIALIFITVgIGFKLSLAPSHqWTPDVYEGSPTPVVA-FLSVTSKVAASALaTR 159
Cdd:PRK12663 188 lnmAHIAMR------LNDMGDTATLTTIALLFLLA-FGMKAALFPFM-WLPAAYHTPNTEVAAlFAALLTKVGIYAL-IR 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 160 IFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGdSNGGYASMITYMLFYISMN 239
Cdd:PRK12663 259 VFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALG-TPAGINGAIFYLVHDMVVK 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 240 LGTFACIILFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVL 319
Cdd:PRK12663 338 TALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLI 417
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1869255417 320 SIYYYLKIIKLLMTG-RNQEITPHVR--NYRKSPLrsnnsielsmIVCVIASTIPGISMNPIIAIAQD 384
Cdd:PRK12663 418 TMYSLFRIFFLAYWGdKDGEEVNFKPipLYRKLPL----------SILAVVVIAMGIAAEPLLNLTQD 475
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
23-380 |
2.88e-15 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 77.50 E-value: 2.88e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 23 ANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYgSSGGEIELQEIVNGLinTQMYN 102
Cdd:COG1009 130 SDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLG-AIAGTLNFSELLAAA--PTILS 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 103 SPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGsPTPVVAFLSVTSKVAASA-LATRIFdiPFYFSSNEWHLLLEILAI 181
Cdd:COG1009 207 SPLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEG-PTPVSALLHAATMVKAGVyLLARLS--PLFALSPVWLTVVAIIGA 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 182 LSMILGNLIAITQTSMKRMLAYSSIgqigyviigiivgdSNGGY------ASMITYMLFYIsMNLGTF-ACiiLF---G- 250
Cdd:COG1009 284 ITALFAALIALAQTDIKRVLAYSTV--------------SQLGYmflalgVGAYVAALFHL-LTHAFFkAL--LFlgaGs 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 251 --LRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGL--YFLVSIGLLTSVLSIYYYLK 326
Cdd:COG1009 347 viHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGlgPLLLAVALLGAFLTAFYSFR 426
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1869255417 327 IIKLLMTGRNQEITPHvrnyrkSPLRSNNSIELSMIVCVIASTIPGISMNPIIA 380
Cdd:COG1009 427 LFFLVFFGKPRPKTPK------HPHESPWLMTLPLVVLAVLSLVLGLLLPGLLE 474
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
23-388 |
2.90e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 77.08 E-value: 2.90e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 23 ANDLITIFVAPECFSLCSYLLSGyTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgeiELQEIVNGLINTQMYN 102
Cdd:PRK12662 129 SNDVFNIYVFLEISSISSYVLVA-MGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITG---TLNMGDMFLIIQDLPT 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 103 SPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRI----FDIPFYFSSNEWHLLLEI 178
Cdd:PRK12662 205 NRAIQIGVLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIvydvFKANFVFTTLPFNNVFMI 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 179 LAILSMILGNLIAITQTSMKRMLAYSSIgQIGYVIIGIIVGDSNGGYASMITYMLFYISMNLGTFACIILFGLRTGTDNI 258
Cdd:PRK12662 285 LAALAIVFGSVLAILSKDIKRIFAYSSI-SHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKL 363
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 259 RDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKII-KLLMTGRNQ 337
Cdd:PRK12662 364 EDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKIVeALYFESRMV 443
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1869255417 338 EitphvRNYRKSPLRSNNSIELSMIVCVIASTIPGISMNPIIAIAQDTLFS 388
Cdd:PRK12662 444 E-----SKANDKAFKTPNAMVLCIWIMAILSIIVGIYPIPLTLISEKIAFD 489
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
6-383 |
4.64e-15 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 76.52 E-value: 4.64e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 6 FLLFVLTATLGGMFLcgANDLITIFVAPECFSLCSYLLSGYTKKDVRSnEATMKYLLMGGASSSILVHGFSWLYGSSGGE 85
Cdd:TIGR01972 110 ALLLLLEAGVIGVFL--ALDLFLFYVFWEAMLIPMYLLIGVWGGPNRI-YAAMKFFLYTLAGSLLMLLAILGLYFLGGGT 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 86 IELQEivngLINTQMYNSPGiSIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASALATriFDIP 164
Cdd:TIGR01972 187 FDLLE----LLNLPLPFGVQ-TWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAgVLLKMGTYGFLR--FNLP 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 165 -FYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGgyasMITYMLFYISMNLGTF 243
Cdd:TIGR01972 260 lFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELG----ISGAVFQMISHGLITA 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 244 ACIILFGL---RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLyFLVSIGLLTSVLS 320
Cdd:TIGR01972 336 ALFLLVGVlyeRAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFKVNP-VVAFLAALGIVLA 414
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1869255417 321 IYYYLKIIKLLMTGRNQeiTPHVRNYRKSPLRsnnsiELSMIVCVIASTIP-GISMNPIIAIAQ 383
Cdd:TIGR01972 415 AAYMLTLYKRVFFGELS--NPEVAEFPDLNGR-----EIAVLAPLVVLILFlGLYPNPLLDLTE 471
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
6-383 |
1.61e-14 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 74.68 E-value: 1.61e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 6 FLLFVLTATLGGMFLcgANDLITIFVAPECFSLCS---YLLSGYTkkdvRSNEATMKYLLMGGASSSILVHGFSWLYGSS 82
Cdd:PRK06277 104 FLMLMGLASVSAIVL--ADDIFNLYVFFEIAAIVQvglVIASGTE----EAYKAALKYMILGNVAGSILLLGIGFLLAST 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 83 GgEIELQEIVNGLINTqmYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALAT---R 159
Cdd:PRK06277 178 G-TLNITDIHNALLVN--PTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLvifK 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 160 IFDIPFYFSSNEWHLLLeiLAILSMILGNLIAITQTSMKRMLAYSSIgqigyviigiivgdSNGGYASM---------IT 230
Cdd:PRK06277 255 LFGGLSYFPSAQGVLIA--LSVLAMVFGVVMALLQTDYKRLLAYHAI--------------SQGGYVAAglalgtplgIV 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 231 YMLFYISMNLGTFACIIL-FGL---RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAG- 305
Cdd:PRK06277 319 AGIFHAINHVIYKSALFLgAGIvsyRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANm 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 306 -----LYFLVSIGLLTSVLSIYY--YLKIIKLLMTGRNQEItphvrnyrksPLRSNNSIELSMIVCVIASTIPGISMNPI 378
Cdd:PRK06277 399 pelaiIMIIVSIGTFVSMMKAFYliYLKPKPEELEYKNKKV----------PKYAVFSLAVLTILCIILGLFPDLVTNYL 468
|
....*
gi 1869255417 379 IAIAQ 383
Cdd:PRK06277 469 YPFAN 473
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-205 |
3.56e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 73.83 E-value: 3.56e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 6 FLLFVLTATLGGMFLCGanDLITIFVAPECFSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGe 85
Cdd:PRK07234 98 AQLLILHGSVNAAFVCA--DLISLYVALEVLSIATFLLVAYPRTD-RAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGT- 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 86 ielqeivngLINTQMYNSPGISIALIFitVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASALATRIFDIP 164
Cdd:PRK07234 174 ---------FAFSGLATADPEAFALIA--LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSgVVVKAGVFPLVRCALDVP 242
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1869255417 165 fyfssnEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 205
Cdd:PRK07234 243 ------GLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFST 277
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-322 |
1.12e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 72.31 E-value: 1.12e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 10 VLTATLGGMFLCGanDLITIFVAPECFSLCSYLL--SGYTKKDVRsneATMKYLLMGGASSSILVHGFSWLYGSSGG--- 84
Cdd:PRK12665 119 ILVAGVSNAFLAG--DLFNLYVGFEILLVASYVLltLGATAARVR---AGVTYVMVSMVSSLLFLIGIALVYAATGTlnm 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 85 ---EIELQEIvnglintqmynSPGISIAL-IFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVA-FLSVTSKVAASALatr 159
Cdd:PRK12665 194 adlAVRLDEL-----------PSGTRTALfAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAvFAGLLTKVGVYAI--- 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 160 IFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSsigqigyviigiivgdsnggYASMITYMLFYISMN 239
Cdd:PRK12665 260 IRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFT--------------------LVSHIGYMVFGIALS 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 240 --LGTFACII-----------LF---GL---RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWC 300
Cdd:PRK12665 320 tvAGLSGAIYyvahhitvqttLFlvvGLierQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEA 399
|
330 340
....*....|....*....|....*
gi 1869255417 301 GWQAG---LYFLVSIGLLTSVLSIY 322
Cdd:PRK12665 400 GAEDGtwlAWALVAGGVVTSLLTLY 424
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
52-327 |
6.51e-13 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 69.19 E-value: 6.51e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 52 RSNEATMKYLLMGGASSSILVHGF---SWLYGSsggeielqeivnglintQMYNSPGISIALIFITVGIGFKLSLAPSHQ 128
Cdd:MTH00041 51 RSVEATIKYFLVQAFSAAILLNGAliqAWLSGS-----------------WSINGPLNTLSSIIITLALALKLGLAPCHF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 129 WTPDVYEGSPTPVVAFLSVTSKVAAsalatriFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQ 208
Cdd:MTH00041 114 WFPDVLQGLPFLQGLIIATWQKIAP-------LILLISISNLLNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAH 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 209 IGYVIIGIivgdSNGGYASmITYMLFYISMNLGTFACIILFGLRTGTDNIRdyagLYTKDPFLALSLALCLLSLGGLPPL 288
Cdd:MTH00041 187 LGWIIITS----AYSPNAS-IIMFLIYIIINTSIFLIGNNFSLSTLSHLNK----LSQLNPISAFLFILSILSLGGLPPL 257
|
250 260 270
....*....|....*....|....*....|....*....
gi 1869255417 289 AGFFGKLHLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKI 327
Cdd:MTH00041 258 TGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRI 296
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
10-326 |
1.56e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 69.18 E-value: 1.56e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 10 VLTATLGGMF-LCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLL---MGGASssILVhGFSWLyGSSGGE 85
Cdd:PRK12644 111 ELVAFAGAMFgLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLvttAGGLA--MLV-GIIIL-GQAAGT 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 86 IELQEIVNglintQMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEgSPTPVVAFLSVTSKVAASA-LATRIfdIP 164
Cdd:PRK12644 187 YRLSELLA-----DPPTGPAVSVAVVLILVGALSKSAIVPFHFWLPGAMA-APTPVSAYLHAAAMVKAGIyLVARL--AP 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 165 FYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMItyMLFYISMNLGTfa 244
Cdd:PRK12644 259 GFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLA--MLLAHALFKAA-- 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 245 ciiLF---GL---RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGK-------LHLFWCGWqAGLYFLVS 311
Cdd:PRK12644 335 ---LFlvvGIidhSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKeaaleavLHDGALGP-AGPVVLAG 410
|
330
....*....|....*
gi 1869255417 312 IgLLTSVLSIYYYLK 326
Cdd:PRK12644 411 I-VLGSILTVAYSLR 424
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
6-205 |
2.26e-12 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 68.18 E-value: 2.26e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 6 FLLFVLTATLGGMFLcgANDLITIFVAPECFSLCSYLLS---GYTKKdvrsNEATMKYLLMGGASSSILVHGFSWLYGSS 82
Cdd:COG1008 115 ALLLLLEAGMIGVFL--ALDLFLFYVFWELMLIPMYFLIgiwGGERR----IYAAIKFFLYTLAGSLLMLVAILALYFLA 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 83 GGEI-ELQEIVNGLI--NTQMynspgisiaLIFITVGIGF--KLSLAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASAL 156
Cdd:COG1008 189 GALTfDIAELAAAPLplTAQL---------LLFLAFFIAFavKVPMFPFHTWLPDAHVEAPTAGSVLLAgVLLKMGGYGL 259
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1869255417 157 AtRiFDIP-FYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 205
Cdd:COG1008 260 L-R-FALPlFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSS 307
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
5-206 |
5.66e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 67.16 E-value: 5.66e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 5 EFLLFVLTATLGGMFlcgANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLyGSSGG 84
Cdd:PRK12649 115 QYLLLFMGSMIGMVF---SGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLL-HVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 85 EIELQEIVNG--LINTqMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEgSPTPVVAFL-SVTSKVAASALATRIF 161
Cdd:PRK12649 191 TYDIATILQDseLIEN-IKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAME-APTPVSAFLhSATMVKAGVYLVARIH 268
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1869255417 162 diPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSI 206
Cdd:PRK12649 269 --PIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTI 311
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
6-204 |
1.92e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 65.71 E-value: 1.92e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 6 FLLFVLTATLGgmfLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgE 85
Cdd:PRK12647 100 YILLFMASMLG---LVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTG-T 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 86 IELQEIVNGliNTQMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEgSPTPVVAFL-SVTSKVAASALATRIFdiP 164
Cdd:PRK12647 176 YSLSELLAS--GDVIREHPLYLAILLLVLGGAFTKSAQFPFHFWLPNAME-APTPVSAYLhSATMVKAGIYLLARLN--P 250
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1869255417 165 FYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYS 204
Cdd:PRK12647 251 VLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYS 290
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
23-205 |
1.29e-10 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 62.64 E-value: 1.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 23 ANDLITIFVAPECFSLCSYLLSGyTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYgsSGGEIELQEIVNGLINTQMYN 102
Cdd:PRK06458 127 SNNLGLMWVAIEATTLSSALLVG-IYRTRASLEAAWKYIIICSVGVAFALFGTILVY--ANAATVMGDGEMAILWTELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 103 SPG------ISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASALaTRIFDIPFYFSSNEW--H 173
Cdd:PRK06458 204 HASlldptlMKLAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSgVLLNVALYAV-LRYYILIDAAIGSDFpgR 282
|
170 180 190
....*....|....*....|....*....|..
gi 1869255417 174 LLLeILAILSMILGNLIAITQTSMKRMLAYSS 205
Cdd:PRK06458 283 LLL-IFGLLSVLVAAFFLLRQRDIKRLFAYSS 313
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
56-205 |
2.05e-10 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 62.04 E-value: 2.05e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 56 ATMKYLLMGGASSSILVHGF---SWLYGSSGGEIELQEIVNGLINTQMynspgisIALIFITVGIGFKLSLAPSHQWTPD 132
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFlgiVWLSGSTSFDYDAISTQNLSLNTQL-------ILLTGLLLGFGIKIPLVPLHTWLPD 230
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1869255417 133 VY-EGSPTPVVAFLSVTSKVAASALATriFDIPFYfsSNEWHLLLEILAI---LSMILGNLIAITQTSMKRMLAYSS 205
Cdd:PRK07363 231 AYtEASPAVAILLGGVLAKLGTYGLLR--FGLQLF--PQTWSLVAPGLAIigtISVIYGALSAIAQKDIKRMVAYSS 303
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
100-355 |
3.64e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 60.67 E-value: 3.64e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 100 MYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAAsalatrIFDIPFYFSSNEWHLLLEIL 179
Cdd:MTH00144 77 MYNLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAP------LFLLSNFLDLYWLAYLLCVI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 180 AILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGiivgdSNGGYASMITYMLFYISMNLGTFaciilFGLRTGTDNIR 259
Cdd:MTH00144 151 SVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVA-----ILHGSWLMWMYFLIYIVSSGFLF-----FSLWSGDSGSM 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 260 DYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKIIKLLMTGRNQEI 339
Cdd:MTH00144 221 KDLGSLKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSK 300
|
250
....*....|....*.
gi 1869255417 340 TPHVRNYRKSPLRSNN 355
Cdd:MTH00144 301 KSNSSKVLNSSIISLN 316
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
7-205 |
4.48e-10 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 61.25 E-value: 4.48e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 7 LLFVLTATLGGMFLcgANDLITIFVAPECFSLCSYLLSGYTKKDvRSNEATMKYLLMGgASSSILV----HGFSWLYGSS 82
Cdd:PRK06473 112 LLLLLNAGVSGAFL--AQDLLLFFLFYELELIPLYLLIAIWGGQ-RRGYAATKFLLYT-AISGILIlvsfLGLVWLSGAS 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 83 GGEIELQEIVNGLINTQMynspgisIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASALATriF 161
Cdd:PRK06473 188 SFDYEPLRSHTLPLSTQL-------LLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAgVLLKLGTYGLLR--F 258
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1869255417 162 DIPFYFSSneWHLL---LEILAILSMILGNLIAITQTSMKRMLAYSS 205
Cdd:PRK06473 259 GVGLFPEA--WVYLapwLATWAVVSVLYGASCAIAQKDMKKMVAYSS 303
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
23-205 |
2.43e-09 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 58.97 E-value: 2.43e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 23 ANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGG-EIELQEivnglintqmY 101
Cdd:PRK08667 130 SANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSfELSPLG----------A 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 102 NSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASALATriFDIPFYFSSNEWHLLLEILA 180
Cdd:PRK08667 200 SAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSgVMLKVAVYGLVR--FLMDVLSPELWWGVLILLAG 277
|
170 180
....*....|....*....|....*
gi 1869255417 181 ILSMILGNLIAITQTSMKRMLAYSS 205
Cdd:PRK08667 278 SISALLGVIYALKEHDLKGLLAYSS 302
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
6-205 |
3.92e-09 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 58.40 E-value: 3.92e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 6 FLLFVLTATLGGMFlcgANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLL---MGGASssiLVHGFSWLYGSs 82
Cdd:PRK12645 115 YLLLFMGAMLGVVL---SDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLitvFGGLS---MLGGFILLYIM- 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 83 GGEIELQEIVNGLINTQmyNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEgSPTPVVAFL-SVTSKVAASALATRIf 161
Cdd:PRK12645 188 TGSFSIREMIANADEIQ--NSPLFIPAMILILLGAFTKSAQFPFYIWLPDAME-APTPVSAYLhSATMVKAGIYLVARF- 263
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1869255417 162 dIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 205
Cdd:PRK12645 264 -TPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFST 306
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
56-205 |
6.86e-09 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 57.52 E-value: 6.86e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 56 ATMKYLLMGGASSSILVHGFSWLY---GSSGGEIELQEIVNGLINTQMYNspgisiaLIFITVGIGF--KLSLAPSHQWT 130
Cdd:PRK05846 162 AATKFFLYTLLGSLLMLVAIIYLVvvyYNATGTFDIADLLNLPLPPGVQY-------WLFLAFFIAFavKMPMFPLHTWL 234
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1869255417 131 PDVYEGSPTPVVAFLS-VTSKVAASALATriFDIPFY-FSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 205
Cdd:PRK05846 235 PDAHVQAPTAGSVLLAgILLKMGAYGLLR--FSLPLFpDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSS 309
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
6-327 |
1.44e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 55.75 E-value: 1.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 6 FLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKdVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGe 85
Cdd:MTH00200 6 LPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQ- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 86 ielqeivngLINTQMYNSPGISIalifITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALATRifdipF 165
Cdd:MTH00200 84 ---------WGISEMLGPLSETL----ILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQ-----L 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 166 YFSSNEWhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIvgdsnggYASMITYMLF--YISMNLGTF 243
Cdd:MTH00200 146 APALNSN--ILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLV-------YSPNLALLYLllYVIITLTVF 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 244 aciILFGLrTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVLSIYY 323
Cdd:MTH00200 217 ---LLLNL-LNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFF 292
|
....
gi 1869255417 324 YLKI 327
Cdd:MTH00200 293 YLRL 296
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
23-205 |
3.99e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 55.28 E-value: 3.99e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 23 ANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGG-------EIELqeivngl 95
Cdd:PRK06521 132 ADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSydfaamrAAHL------- 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 96 intqmynSPGI-SIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASALATRIFDIpFYFSSNEWH 173
Cdd:PRK06521 205 -------SPFWaSLVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSgVMLKVAIYGILRVVFDL-LGAPGWWWG 276
|
170 180 190
....*....|....*....|....*....|..
gi 1869255417 174 LLLEILAILSMILGNLIAITQTSMKRMLAYSS 205
Cdd:PRK06521 277 VLVLALGAISAVLGVLYALAEHDLKRLLAYST 308
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
3-205 |
5.35e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 54.96 E-value: 5.35e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 3 ITEFLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGS- 81
Cdd:MTH00032 110 VPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTi 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 82 --------SGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGF--KLSLAPSHQWTPDVYEGsPTPVVAFLSVTSKV 151
Cdd:MTH00032 190 gsldfltfNGGSVGSGIMDRGYYGGGAYESPLAPFAIIGILLLIGCigKSAQLGLHTWLPDAMEG-PTPVSALIHAATMV 268
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1869255417 152 AASALATrIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 205
Cdd:MTH00032 269 TAGVFLM-IRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYST 321
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
25-206 |
1.87e-07 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 53.10 E-value: 1.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 25 DLITIFVAPECFSLCSYLLSG--YTKKDvrSNEATMKY----------LLMGgasssILvhGFSWLYGSsggeIELQEIV 92
Cdd:PRK07376 143 NLVQIYVFWELVGMCSYLLVGfwYDRKG--AADAAQKAfvvnrvgdfgLLLG-----IL--GLFWATGS----FDFDGIA 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 93 NGLinTQMYNSPGISIAL-----IFITVGIGFKLSLAPSHQWTPDVYEGsPTPVVAFLSVTSKVAASA-LATRIFdiPFY 166
Cdd:PRK07376 210 DRL--SELVSSGAVSGWLalllcILVFLGPMAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGVfLVARMY--PVF 284
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1869255417 167 fssNEWHLLLEILAILSMI---LGNLIAITQTSMKRMLAYSSI 206
Cdd:PRK07376 285 ---EQFPAVMTVIAWTGAItafLGASIALTQNDIKKGLAYSTI 324
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
6-343 |
2.53e-07 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 52.83 E-value: 2.53e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 6 FLLFVLTATLGgmfLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGE 85
Cdd:PRK12646 115 YLTLFMFSMIG---IVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTN 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 86 iELQEIVNGliNTQMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEgSPTPVVAFLSVTSKVAASALATRIFdIPF 165
Cdd:PRK12646 192 -NITEILGQ--ADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRAMA-APTPVSAYLHSATMVKAGIFLLFRF-TPL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 166 YFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGI-----IVGDSNGGYASMITYMLF---YIS 237
Cdd:PRK12646 267 LGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVgigggYAQHQQDAIASIYVFVLFaalFHL 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 238 MNLGTFACIILFGL-----RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAG------- 305
Cdd:PRK12646 347 MNHAIFKCALFMGVgiidhEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGqlsqfsl 426
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1869255417 306 --LYFLVSIGLLTSVLSIYYYLKIIKLLMTGR-NQEITPHV 343
Cdd:PRK12646 427 isMIIIVFIGVIASIFTFTYALYMVKEVFWGKyDSKVFTKK 467
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
52-205 |
3.73e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 51.46 E-value: 3.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 52 RSNEATMKYLLMGGASSSILVhgFS-----WLYGssggEIELqeivnglINTQMynspgiSIALIFITVGIGFKLSLAPS 126
Cdd:MTH00070 51 RATEAATKYFLTQASASALIL--FSstinaWFTG----EWTI-------MNMQT------PLPTIMLTIALMMKLGIAPF 111
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1869255417 127 HQWTPDVYEGSPTPVVAFLSVTSKVAASALatrIFDIPFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSS 205
Cdd:MTH00070 112 HFWLPEVLQGLDLTTGLILSTWQKLAPMAL---LIQISHLLNSN----LLIIMGLLSTLIGGWGGLNQTQLRKIMAYSS 183
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
6-205 |
7.10e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 51.19 E-value: 7.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 6 FLLFVLTATLGGMFLcgANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGGE 85
Cdd:PRK12561 91 FLMLVLYSAQIGVFL--AQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSGDTFT 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 86 IELQEIVNglintqmyNSPGISIALIFIT---VGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASAL----A 157
Cdd:PRK12561 169 FDLAELGA--------KSYPLALELLLYAgflIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAgVLLKMGGYALirfnV 240
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1869255417 158 TRIFDIPFYFSSnewhlLLEILAILSMILGNLIAITQTSMKRMLAYSS 205
Cdd:PRK12561 241 QMLPDAHVYFAP-----ALAILGVVNIIYGALNAFAQDNVKRRLAYSS 283
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
52-327 |
1.82e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 49.44 E-value: 1.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 52 RSNEATMKYLLMGGASSSILVhgFS-----WLYGSsgGEIelqeivnglinTQMYNSPgisiALIFITVGIGFKLSLAPS 126
Cdd:MTH00112 51 RATEAATKYFLTQAAASALIL--FSsttnaWNTGQ--WDI-----------TQLTNPT----SCTLLTLALAMKLGLAPF 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 127 HQWTPDVYEGSPTPVVAFLSVTSKVAASALatrifdipFYFSSNEWHL-LLEILAILSMILGNLIAITQTSMKRMLAYSS 205
Cdd:MTH00112 112 HFWLPEVLQGSTTTTALILSTWQKLAPLTL--------LLMTSNSLNPtLLLTLAILSTLIGGWGGLNQTQLRKIMAFSS 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 206 IgqigyviigiivgdSNGGY-ASMITY--------MLFYISMNLGTFACIILfglrTGTDNIRDYAGLYTKDPFLALSLA 276
Cdd:MTH00112 184 I--------------AHLGWmIAIITYspkltlltFYIYILMTTPMFLTLNT----TSTKTLKDMMTSWTKSPTLNTTLM 245
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1869255417 277 LCLLSLGGLPPLAGFFGKlhlfwcgW-------QAGLYFLVSIGLLTSVLSIYYYLKI 327
Cdd:MTH00112 246 LTLLSLAGLPPLTGFMPK-------WlilqeltKQNMTPTATIMAMLSLLSLFFYLRL 296
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
13-206 |
2.77e-06 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 49.12 E-value: 2.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 13 ATLGGMFlcgANDLITIFVAPECFSLCSYLL--SGYTKKDVRsneATMKYLLMGGASSSILVHGFSWLYGSSGGeielqe 90
Cdd:PRK12668 105 SALGAVF---AGDLLTLFVFWELMAFTSTFLvwARGTKAAVR---AGFRYLLVHVLGGVLLLAGILLHYAETGS------ 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 91 ivngLINTQMYNSPGISIALIFItvGIGFKLSLAPSHQWTPDVY-EGSPTPVVaFLSV-TSKVAASALAtRIFDipfyfs 168
Cdd:PRK12668 173 ----FAFGAIAGLGGTAAWLILI--GFGVNAAFPPLHAWLPDAYpEATVTGSV-FLSAfTTKTAVYALA-RAFP------ 238
|
170 180 190
....*....|....*....|....*....|....*...
gi 1869255417 169 snEWHLLLEILAILSmILGNLIAITQTSMKRMLAYSSI 206
Cdd:PRK12668 239 --GTELLIYIGAAMA-VYGVFFALLENDLRRLLSYHIV 273
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
4-205 |
2.95e-06 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 49.27 E-value: 2.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 4 TEFLLFVLTATLggmflcgANDLITIFVAPECFSLCSYLLSGYTKKDVRsnEATMKYLLMGGASSSILVHGFSWLYGSSG 83
Cdd:PRK12650 117 TAFMAAMLLLVL-------ADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTG 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 84 gEIELQEIvngLINTQMYNSPGISIALIFITVGIGF-KLSLAPSHQWTPDVYeGSPTPVVAFLSVTSKVAASA-LATRIF 161
Cdd:PRK12650 188 -TTSLSGI---LHSDVWAEKPGLTTVVAVLIAVAAFtKSAQFPFHFWLPEAM-AAITPVSAFLHAAAVVKAGIyLLLRFS 262
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1869255417 162 DIpfyFSSNE-WHLLLEILAILSMILGNLIAITQTSMKRMLAYSS 205
Cdd:PRK12650 263 PV---FHDVAvWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYST 304
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
48-328 |
1.15e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 46.74 E-value: 1.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 48 KKDVRSNEATMKYLLMGGASSSILVhgFSwlygssggeielqeivngLINTQMYNSPGISIALIFITVGIGFKLSLAPSH 127
Cdd:MTH00160 48 KKNLMSSESSLKYFLIQALASIILL--FS------------------IILNMLNLMLFNNISSMLINSSLLLKLGAAPFH 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 128 QWTPDVYEGSPTPVVAFLSVTSKVAasalatrifdiPFY-FSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSI 206
Cdd:MTH00160 108 FWFPEVMEGLSWINCFILMTWQKIA-----------PLIlLSYLINNNFIIIIIILSAIIGAIGGLNQTSLRKILAYSSI 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 207 GQIGYVIIGIIVGDSnggyaSMITYMLFYISMNLGtfacIILFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLP 286
Cdd:MTH00160 177 NHLGWMLSSMMISEN-----LWLIYFLIYSIISLS----IILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLP 247
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1869255417 287 PLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKII 328
Cdd:MTH00160 248 PFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRIS 289
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-328 |
2.22e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 46.35 E-value: 2.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 6 FLLFVLTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVrSNEATMKYLLMGGASSSIL-VHGFSWLYGSSGg 84
Cdd:PRK06589 118 FLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRNNI-SLSGGYKYLKILMISALLLfLPAVILIYTKTG- 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 85 eiELQEIVNGLINTqmynSPGISIALIFItVGIGfKLSLAPSHQWTPDVYEgSPTPVVAFLSVTSKVAASA-----LATR 159
Cdd:PRK06589 196 --NLDFVSGGLFSK----NQSIILLLMFI-YGIA-KTAIFPVHSWLPAAMV-AHYPVSALLHAVIVVKTGLfciykILLY 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 160 IFDIPF---YFSSNEWhllLEILAILSMILGNLIAITQTSMKRMLAYSSIgqigyviigiivgdSNGGYASMITYMLFYI 236
Cdd:PRK06589 267 IFGLSYlqrIFAEFNW---LIFIPIVSIFYSSLKALKTDNIKKILAYSTI--------------SQLSLALLSAFILTPK 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 237 SMNLGT-------FACIILFGL------RTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQ 303
Cdd:PRK06589 330 ALGAAIlhlvshsFAKICLFYSmgsiysLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASE 409
|
330 340
....*....|....*....|....*....
gi 1869255417 304 AGL----YFLVSIGLLTSVLSIYYYLKII 328
Cdd:PRK06589 410 QNQpwlsIIVMLVVIASSILSALYLLKIL 438
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
18-206 |
2.51e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 46.22 E-value: 2.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 18 MFLCGANDLITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSGgEIELQEIVNGLIn 97
Cdd:MTH00020 125 VVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFG-SLDFSSVFNMVV- 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 98 tqMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGsPTPVVAFLSVTSKVAASALATrIFDIPFYFSSNEWHLLLE 177
Cdd:MTH00020 203 --SAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEG-PTPVSALIHAATMVTAGVFLL-IRSSPLFEQAPLALIIVT 278
|
170 180
....*....|....*....|....*....
gi 1869255417 178 ILAILSMILGNLIAITQTSMKRMLAYSSI 206
Cdd:MTH00020 279 IVGSLTVFFAATVGLVQNDLKKVIAYSTC 307
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-206 |
6.23e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 44.39 E-value: 6.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 7 LLFVLTATLGGMFLCGANDLITIFVAPEcFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYGSSggei 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGME-LNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFP---- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 87 elqeivnglintqmynSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAAsalatriFDIPFY 166
Cdd:MTH00011 84 ----------------SLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAP-------LSILFF 140
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1869255417 167 FSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSI 206
Cdd:MTH00011 141 FTSHNILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSI 180
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
26-206 |
1.45e-04 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 44.11 E-value: 1.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 26 LITIFVAPECFSLCSYLLSGYTKKDVRSNEATMKY----------LLMGgasssILvhGFSWLYGSSggEIE-LQEIVNG 94
Cdd:CHL00025 144 LIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAfvtnrvgdfgLLLG-----IL--GFYWITGSF--EFRdLFEIFNN 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 95 LINTQMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGsPTPVVAFLSVTSKVAASA-LATRIF----DIPFYFSS 169
Cdd:CHL00025 215 LIYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIfLVARLLplfiVIPYIMNL 293
|
170 180 190
....*....|....*....|....*....|....*..
gi 1869255417 170 NEWhllleiLAILSMILGNLIAITQTSMKRMLAYSSI 206
Cdd:CHL00025 294 ISL------IGIITALLGATLALAQKDIKRGLAYSTM 324
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
6-204 |
1.94e-04 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 43.42 E-value: 1.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 6 FLLFVLTATLGGMFlcgANDLITIFVAPECFSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVHGFSWLYgSSGGE 85
Cdd:PRK06525 118 FLLLFIGAMAGLVY---SSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLF-LQTGT 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 86 IELQEIvNGLintqmyNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGsPTPVVAFLSVTS--KVAASALATRIFDI 163
Cdd:PRK06525 193 FALSAL-SGL------HGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEA-PTPASAYLHAASmvKVGVYIFARAIQSM 264
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1869255417 164 PFYfsSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYS 204
Cdd:PRK06525 265 GPI--PHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYS 303
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-328 |
4.38e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 41.97 E-value: 4.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 8 LFVLTATLGGMFLCGANDLITIFVAPEcFSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYgssggeie 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGME-LNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSF-------- 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 88 lqeivnglintqmYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLSVTSKVAASALATrifdipfYF 167
Cdd:MTH00197 73 -------------SNLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILA-------FN 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 168 SSNEwhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNggyasMITYMLFYISMNLGTFacii 247
Cdd:MTH00197 133 SSSF--MGLLICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSI-----FMLYYLIYFVIMFMLF---- 201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 248 LFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVLSIYYYLKI 327
Cdd:MTH00197 202 LFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSL 281
|
.
gi 1869255417 328 I 328
Cdd:MTH00197 282 A 282
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
7-340 |
1.94e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 40.15 E-value: 1.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 7 LLFVLTATLGGMflcGANDLITIFVAPECFSLCSYLLSGyTKKDVRSNEATMKYLLMGGASSSILVHGFSWLYgSSGGEI 86
Cdd:PRK06591 121 LLFAHTGYLGMI---ATNDFFNLYVFIEISALSSYVLIA-SGNNPKSLIGAFDYLIMGSIGATLILIAIGFLL-SITGSL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 87 ELQEIVNGLinTQMYNSPGISIALIFITVGIGFKLSLAPSHQWTPDVYEGSPTPVVAFLS-VTSKVAASALATRIFDIPF 165
Cdd:PRK06591 196 NMTDIAAYL--QEHTNSRIITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAgISTIIGIYIIYKFTYIIIG 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 166 YFSSNEWHL-LLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIivgdSNGGYASMITYMLFYISMNlgtfa 244
Cdd:PRK06591 274 YETIKTAITnFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLLY----VTENGIIILPSLLLADSIN----- 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1869255417 245 CIILFglrtgtdNIRDYAGLYTKDPfLALSLALCLLSLGGLPPLAGFFGKLHLFWCGWQAGLYFLVSIGLLTSVLSIYYY 324
Cdd:PRK06591 345 KIALF-------LIDAYNESYKREP-NKVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYH 416
|
330
....*....|....*.
gi 1869255417 325 LKIIKLLMTgRNQEIT 340
Cdd:PRK06591 417 YKMVLLLFP-TKQESH 431
|
|
| |
