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Conserved domains on  [gi|1824669232|ref|YP_009740705|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Euparatettix bimaculatus]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
19-309 1.76e-134

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 383.74  E-value: 1.76e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  19 MVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPY 98
Cdd:MTH00193   14 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPY 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  99 ITFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIYY--N 176
Cdd:MTH00193   94 LFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYqkY 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 177 VWFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGGDFDSLF 256
Cdd:MTH00193  174 IWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLL 253
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1824669232 257 FFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYF 309
Cdd:MTH00193  254 FYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
19-309 1.76e-134

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 383.74  E-value: 1.76e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  19 MVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPY 98
Cdd:MTH00193   14 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPY 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  99 ITFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIYY--N 176
Cdd:MTH00193   94 LFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYqkY 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 177 VWFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGGDFDSLF 256
Cdd:MTH00193  174 IWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLL 253
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1824669232 257 FFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYF 309
Cdd:MTH00193  254 FYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
20-301 4.55e-99

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 293.61  E-value: 4.55e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  20 VLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPY- 98
Cdd:pfam00146   9 LLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFg 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  99 -ITFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIYY-- 175
Cdd:pfam00146  89 pGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAqa 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 176 NVWFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGG----- 250
Cdd:pfam00146 169 GGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwlgpf 248
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1824669232 251 -DFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIF 301
Cdd:pfam00146 249 pLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
19-301 1.34e-93

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 280.48  E-value: 1.34e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  19 MVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPY 98
Cdd:COG1005    21 FLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPF 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  99 ITFFC--SLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIYY- 175
Cdd:COG1005   101 GPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAq 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 176 --NVWFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGG--- 250
Cdd:COG1005   181 agGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGwlg 260
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 251 -----DFDS----LFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIF 301
Cdd:COG1005   261 pfpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
20-309 1.36e-50

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 170.66  E-value: 1.36e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  20 VLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFP-- 97
Cdd:NF040610   23 VFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVAIPfg 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  98 --------YITFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNL 169
Cdd:NF040610  103 aviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAGSLNI 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 170 SYFIYYN--VWFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFF 247
Cdd:NF040610  183 VEIVEAQspIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLVVLLF 262
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824669232 248 FGG---------------DFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYF 309
Cdd:NF040610  263 LGGwnlpgfvtdipvlgiILPTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSLLNLGWAIALGLYL 339
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
19-309 1.76e-134

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 383.74  E-value: 1.76e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  19 MVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPY 98
Cdd:MTH00193   14 CVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPY 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  99 ITFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIYY--N 176
Cdd:MTH00193   94 LFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYqkY 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 177 VWFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGGDFDSLF 256
Cdd:MTH00193  174 IWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGGDLLSLL 253
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1824669232 257 FFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYF 309
Cdd:MTH00193  254 FYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
19-307 7.32e-118

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 341.63  E-value: 7.32e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  19 MVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPY 98
Cdd:MTH00225   13 CLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPS 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  99 ITFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIYYN-- 176
Cdd:MTH00225   93 MFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQky 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 177 VWFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGGDFDSLF 256
Cdd:MTH00225  173 FWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGGFFVTID 252
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1824669232 257 FFF--KLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKI 307
Cdd:MTH00225  253 LFLilKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
19-305 4.44e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 331.83  E-value: 4.44e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  19 MVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPY 98
Cdd:MTH00143   13 CVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPS 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  99 ITFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLS--YFIYYN 176
Cdd:MTH00143   93 YFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIeiSESQFS 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 177 VWFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGGDFD--- 253
Cdd:MTH00143  173 VWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGGSSVlfl 252
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1824669232 254 --SLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGL 305
Cdd:MTH00143  253 lgGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
19-309 4.14e-111

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 324.56  E-value: 4.14e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  19 MVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPY 98
Cdd:MTH00218   14 PVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPL 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  99 ITFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIYY--N 176
Cdd:MTH00218   94 PFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTqeT 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 177 VWFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGGDFDSLF 256
Cdd:MTH00218  174 IWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLTTIN 253
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1824669232 257 FFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYF 309
Cdd:MTH00218  254 LMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
20-311 2.17e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 310.40  E-value: 2.17e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  20 VLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPYI 99
Cdd:MTH00071   18 VLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMP 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 100 TFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIY--YNV 177
Cdd:MTH00071   98 NNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTtqEFM 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 178 WFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGGDFD---- 253
Cdd:MTH00071  178 WLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNhlqp 257
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1824669232 254 ---SLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYFLI 311
Cdd:MTH00071  258 elsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLG 318
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
20-296 4.55e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 309.52  E-value: 4.55e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  20 VLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPYI 99
Cdd:MTH00111   18 ILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMP 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 100 TFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIYY--NV 177
Cdd:MTH00111   98 FPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTqePL 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 178 WFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFL-IVLFFFGGDFDSLF 256
Cdd:MTH00111  178 WLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLtTILFLNPSTLNLPP 257
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1824669232 257 FFFKLVFM------SFSFLWVRGTLPRYRYDKLMYLAWKGFLPVAL 296
Cdd:MTH00111  258 ELFTINLMtktlllTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
20-307 2.20e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 307.71  E-value: 2.20e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  20 VLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPYI 99
Cdd:MTH00104   13 ILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMWIPLPMP 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 100 TFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIYY--NV 177
Cdd:MTH00104   93 YPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTLITTqeHL 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 178 WFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGGDFD---- 253
Cdd:MTH00104  173 WLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGAFHNpymp 252
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1824669232 254 ---SLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKI 307
Cdd:MTH00104  253 elyTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPI 309
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
20-309 4.43e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 307.30  E-value: 4.43e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  20 VLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPYI 99
Cdd:MTH00134   19 VLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMP 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 100 TFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYF--IYYNV 177
Cdd:MTH00134   99 YPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFntAQESI 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 178 WFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGG------- 250
Cdd:MTH00134  179 WLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGAshiptlp 258
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1824669232 251 DFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYF 309
Cdd:MTH00134  259 ELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
20-312 3.04e-102

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 302.28  E-value: 3.04e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  20 VLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPYI 99
Cdd:MTH00040   17 VLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVP 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 100 TFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIYY--NV 177
Cdd:MTH00040   97 TPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSqnGS 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 178 WFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGGD------ 251
Cdd:MTH00040  177 WLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGGGspfnei 256
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1824669232 252 --FDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYFLIF 312
Cdd:MTH00040  257 fpINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNIL 319
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
20-301 2.03e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 294.73  E-value: 2.03e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  20 VLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPYI 99
Cdd:MTH00195   15 VLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSP 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 100 TFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLsYFIYYN--- 176
Cdd:MTH00195   95 FGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDF-TIMVISqgf 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 177 VWFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGGDfDSLF 256
Cdd:MTH00195  174 SWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGG-GTII 252
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1824669232 257 FFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIF 301
Cdd:MTH00195  253 VALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIP 297
NADHdh pfam00146
NADH dehydrogenase;
20-301 4.55e-99

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 293.61  E-value: 4.55e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  20 VLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPY- 98
Cdd:pfam00146   9 LLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFg 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  99 -ITFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIYY-- 175
Cdd:pfam00146  89 pGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAqa 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 176 NVWFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGG----- 250
Cdd:pfam00146 169 GGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGwlgpf 248
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1824669232 251 -DFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIF 301
Cdd:pfam00146 249 pLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
19-301 1.34e-93

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 280.48  E-value: 1.34e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  19 MVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPY 98
Cdd:COG1005    21 FLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPF 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  99 ITFFC--SLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIYY- 175
Cdd:COG1005   101 GPGLVlaDLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAq 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 176 --NVWFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGG--- 250
Cdd:COG1005   181 agGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGwlg 260
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 251 -----DFDS----LFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIF 301
Cdd:COG1005   261 pfpilPLGGlpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
19-310 3.23e-93

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 278.97  E-value: 3.23e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  19 MVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPY 98
Cdd:MTH00010   15 MALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPH 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  99 ITFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIYYNVW 178
Cdd:MTH00010   95 KHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSKIIMSQYS 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 179 FIIICF-PLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFG----GDFD 253
Cdd:MTH00010  175 WILLMIiPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSfipsIFIS 254
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1824669232 254 SLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYFL 310
Cdd:MTH00010  255 DLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
20-309 6.24e-87

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 263.51  E-value: 6.24e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  20 VLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPYI 99
Cdd:MTH00054   15 LLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYG 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 100 T--FFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIYY-- 175
Cdd:MTH00054   95 EgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAqk 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 176 NVWFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGGDF--- 252
Cdd:MTH00054  175 NIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLvis 254
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1824669232 253 -------DSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYF 309
Cdd:MTH00054  255 gptsyfsNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGF 318
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
20-309 3.40e-86

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 261.59  E-value: 3.40e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  20 VLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPYI 99
Cdd:MTH00216   19 LLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVIPYE 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 100 --TFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIYYN- 176
Cdd:MTH00216   99 rgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQn 178
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 177 --VWFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGG---- 250
Cdd:MTH00216  179 ngIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGGwlsp 258
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1824669232 251 ----DFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYF 309
Cdd:MTH00216  259 ikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGF 321
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
20-296 4.90e-86

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 260.89  E-value: 4.90e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  20 VLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPYI 99
Cdd:PRK06076   23 VLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFG 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 100 TFFCSLDL--GLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIYY-- 175
Cdd:PRK06076  103 PELVIADLnvGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAqf 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 176 NVWFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGG----- 250
Cdd:PRK06076  183 LSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGwlppf 262
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1824669232 251 -----DFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVAL 296
Cdd:PRK06076  263 plgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
1-309 9.23e-72

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 225.28  E-value: 9.23e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232   1 MYIIDFCLFFLNFFLIILMVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCF 80
Cdd:MTH00029    1 MTIYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  81 SPIFSLFLALFIWLVFPYI--TFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMV 158
Cdd:MTH00029   81 APIISFTLAILAWAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 159 SLFILIGVYNLSYFIYY--NVWFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMI 236
Cdd:MTH00029  161 SVILCVGSLNISEIVISqrSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNI 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 237 IFMSFLIVLFFFGG-----------------------DFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLP 293
Cdd:MTH00029  241 ILMSCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLP 320
                         330
                  ....*....|....*.
gi 1824669232 294 VALNYLIFFFGLKIYF 309
Cdd:MTH00029  321 LSLGLVILTAGILIGF 336
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
19-307 1.39e-62

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 199.74  E-value: 1.39e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  19 MVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPY 98
Cdd:MTH00090    8 FILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPY 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  99 ITFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFiyynvw 178
Cdd:MTH00090   88 FFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVSS------ 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 179 FIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGgdfdslFFF 258
Cdd:MTH00090  162 FSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK------FSF 235
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1824669232 259 FKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKI 307
Cdd:MTH00090  236 LMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
19-303 4.07e-51

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 170.49  E-value: 4.07e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  19 MVLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFPY 98
Cdd:MTH00058   13 IILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGS 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  99 ITFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIYYNVW 178
Cdd:MTH00058   93 YYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWL 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 179 FIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFFFGGDFDSLFFF 258
Cdd:MTH00058  173 SVLLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFVSIMLL 252
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1824669232 259 FKLVFmsfsFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFF 303
Cdd:MTH00058  253 FHLLF----FMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
20-309 1.36e-50

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 170.66  E-value: 1.36e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  20 VLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFP-- 97
Cdd:NF040610   23 VFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVAIPfg 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  98 --------YITFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNL 169
Cdd:NF040610  103 aviingveYPLVVTNMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAGSLNI 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 170 SYFIYYN--VWFIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMSFLIVLFF 247
Cdd:NF040610  183 VEIVEAQspIWFAFLQPIGFIVFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFLVVLLF 262
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1824669232 248 FGG---------------DFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFFGLKIYF 309
Cdd:NF040610  263 LGGwnlpgfvtdipvlgiILPTLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSLLNLGWAIALGLYL 339
ndhA CHL00032
NADH dehydrogenase subunit 1
20-310 1.12e-36

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 134.69  E-value: 1.12e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  20 VLLSVAFLTLLERKVLGYVQLRKGPNKVGYCGILQPFGDAIKLFSKEQVLPYVSNYFLYCFSPIFSLFLALFIWLVFP-- 97
Cdd:CHL00032   40 ITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPfg 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  98 YITFFCSLDLGLLFMLCVMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGvyNLSY------ 171
Cdd:CHL00032  120 YHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSN--SLSTvdivea 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 172 -----FIYYNVWFIIICFPLFLCfygSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEYAMIIFMS-FLIVL 245
Cdd:CHL00032  198 qskygFWGWNLWRQPIGFIVFLI---SSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSlFVTVL 274
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 246 FFFGGDFDSLFFFFKLVFM--------------------SFSFLWV----RGTLPRYRYDKLMYLAWKGFLPVALNYLIF 301
Cdd:CHL00032  275 YLGGWNLSIPYIFIPELFEinktggvfgttigifitlakTYLFLFIsittRWTLPRLRMDQLLNLGWKFLLPISLGNLLL 354

                  ....*....
gi 1824669232 302 FFGLKIYFL 310
Cdd:CHL00032  355 TTSFQLLSL 363
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
26-303 1.10e-29

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 114.51  E-value: 1.10e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232  26 FLTLLERKVLGYVQLRKGPnkvgycGILQPFGDAIKLFSKEQVLPYVSNyFLYCFSPIFSL----FLALFIWLVFPYITF 101
Cdd:COG0650    20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVALaamlLAALLVPVLTTGPPL 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 102 FCSLDLGLLFMLcvMSLGVYGLMVAGWSSNSNYSLLGSLRSVAQTISYEVSLSIIMVSLFILIGVYNLSYFIYYNVW--- 178
Cdd:COG0650    93 SFSGDLIVLVYL--LALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAAhgp 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1824669232 179 --FIIICFPLFLCFYGSCLAETNRTPFDFAEGESELVSGFNVEYGGVGFAFIFLAEY-AMIIFMSFLIVLFFFGG----- 250
Cdd:COG0650   171 llLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAAlKLFVLLSLFVNLFLPWGialtl 250
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1824669232 251 DFDSLFFFFKLVFMSFSFLWVRGTLPRYRYDKLMYLAWKGFLPVALNYLIFFF 303
Cdd:COG0650   251 LLALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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