|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-744 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1434.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 1 MEYIHQYSWIIPFIPLPVPILIGVGLLLFPTATNNIRRMWAFPSILLLTIVMIFSIDLSIHQIENSSIYQYVWSWTINND 80
Cdd:CHL00025 1 MEHTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINND 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 81 LSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYL 160
Cdd:CHL00025 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNLIYKNEVNLFFVTLCALLLFCGSVAK 240
Cdd:CHL00025 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLA 320
Cdd:CHL00025 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 321 YSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMVLMGGLTKHAPITKTSFLI 400
Cdd:CHL00025 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 401 GTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYLNVHFQNFNGKKNSSFYSISLWG 480
Cdd:CHL00025 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 481 KEEKKKLKNkihLLALLTTNNNERTSFFRKRTYsnRINRNVKSIRRLFldSTYFGTKNIpFFYPHESDNTMLFSMLVLVL 560
Cdd:CHL00025 481 KEESKKINK---LLLLLTMNNNERVSFFSKKTY--KIDGNVRNMIRSF--ITIFGNKKT-FSYPHESDNTMLFPLLVLVL 552
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 561 FTFFVGSIGISFSQEPINLDILSKLLIPSIDLLHQNSKNSVDWYEFFTNATFSVSIAFFGIFIASFFYKPVFSSLQNLNL 640
Cdd:CHL00025 553 FTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDL 632
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 641 FNLFQKSVPKKIIADKIINVIYDWSYNRGYIDAFFEVSLIASVRKVAKFNYFFDRQVIDGIPNGIGISSFFIGEAIKYVG 720
Cdd:CHL00025 633 INSFVKGGPKRIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFFVGEGIKYVG 712
|
730 740
....*....|....*....|....*..
gi 1678641912 721 GGRISSYIF---FFVLIFLVISYYIFI 744
Cdd:CHL00025 713 GGRISSYLFlylFYVSIFLLILYFFFS 739
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-738 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 686.76 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 1 MEYIHQYSWIIPFIPLPVPILIGVGLLLFPTATNNIRRMWAFPSILLLTIVMIFSIDLSIHQIENSSIYQYVWSWTINND 80
Cdd:PRK07376 1 MESAYQYAWLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 81 LSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYL 160
Cdd:PRK07376 81 FHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNLIYKNEVNLFFVTLCALLLFCGSVAK 240
Cdd:PRK07376 161 LVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLA 320
Cdd:PRK07376 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 321 YSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMVLMGGLTKHAPITKTSFLI 400
Cdd:PRK07376 321 YSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLI 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 401 GTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGylnvhfqNFNGkknssfysislwg 480
Cdd:PRK07376 401 GCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG-------EFRG------------- 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 481 keekkklknkihllallttNNNERTSFFRKRTYSNRINRNVKSirRLFLDSTYFGTknipffyPHESDNTMLFSMLVLVl 560
Cdd:PRK07376 461 -------------------NDKELQKELLAAADAPGHHEGHHE--EHGEHHHHSGS-------PHESPWTMTLPLVVLA- 511
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 561 ftffVGSIGISFSQEPINlDILSKLLIPSIDLLHQnsKNSVDWYEFFTNATFSVSIAFFGIFIASFFYkpvfsslqnlnl 640
Cdd:PRK07376 512 ----VPSVLIGLLGTPWN-NRFEAFLHAPGEALEA--AAHFEWGEFLILAGASVGIALIGITLASLMY------------ 572
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 641 fnlFQKSVPKKIIADKiINVIYDWSYNRGYIDAFFEVSLIASVRKVAKFNYFFDRQVIDGIPNGIGISSFFIGEAIKYVG 720
Cdd:PRK07376 573 ---LLKKIDPAAIAER-FPPLYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGLVTLGSGEGLKYFE 648
|
730 740
....*....|....*....|
gi 1678641912 721 GGRISSY--IFFFVLIFLVI 738
Cdd:PRK07376 649 NGRAQFYalIVFGAVLGLVI 668
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
6-738 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 552.45 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 6 QYSWIIPFIPLpvpiligVGLLLFPTATNNIRRMWAF-PSILLLTIVMIFSIdLSIHQIENSSIYQYVWSWTINNDLSLE 84
Cdd:COG1009 2 QLLWLIPLLPL-------LGALLAGLLGRRLGRRAAGwLAALAPLAAFVLSL-LLFPAVLGGEVVVELYTWIPVGSLGLD 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 85 FGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGF 164
Cdd:COG1009 74 FGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGF 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 165 WFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNLIyknevNLFFVTLCALLLFCGSVAKSAQF 244
Cdd:COG1009 154 WYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKSAQF 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTM 324
Cdd:COG1009 229 PLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTV 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 325 SQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdkSQNMVLMGGLTKHAPITKTSFLIGTLS 404
Cdd:COG1009 309 SQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG---------TRDIRKMGGLRKKMPITAITFLIGALS 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 405 LCGIPPFACFWSKDEILNDSW---LYSPIFAIIACSTAGLTAFYMFRIYLLVFEGylnvhfqnfngkknssfysislwgk 481
Cdd:COG1009 380 LAGIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVFFG------------------------- 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 482 eekkklknkihllallttnnNERTSFFRKrtysnrinrnvksirrlfldstyfgtknipffyPHESDNTMLFSMLVLVLF 561
Cdd:COG1009 435 --------------------KPRPKTPKH---------------------------------PHESPWLMTLPLVVLAVL 461
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 562 TFFVGSIGISFSQEPINLDilsKLLIPSIDLLHQnsknsvdwyEFFTNATFSVSIAffGIFIASFFYkpvfsslqnlnlf 641
Cdd:COG1009 462 SLVLGLLLPGLLEGLLAPA---AVLGGELHLAHG---------LLLNALPLLLSLL--GIALGYLLY------------- 514
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 642 nlFQKSVPKkiiADKIINVIYDWSYNRGYIDAFFEVSLIASVRKVAKFNyFFDRQVIDGIPNGIGISSFFIGEAIKYVGG 721
Cdd:COG1009 515 --LKRPLPA---LAERLKPLYRLLANKWYFDELYDALFVKPVRALARFL-WFDRYVIDGIVNGLARLTLFSGRLLRRLQT 588
|
730
....*....|....*..
gi 1678641912 722 GRISSYIFFFVLIFLVI 738
Cdd:COG1009 589 GYLQFYALTILLGVVVL 605
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
7-744 |
1.78e-180 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 529.35 E-value: 1.78e-180
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 7 YSWIIPFIPLPVPILIGVGLllfptatnniRRMWAFPSILLLTIVMIFSIDLS------IHQIENSSIYQYVWSWTINND 80
Cdd:PRK06590 4 LLWLIVLLPLIGALILGLFG----------RRIGEKWAHLVGTGLVGLSALLSlvvffdFLLGGGRAFSQTLWTWISVGD 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 81 LSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYL 160
Cdd:PRK06590 74 FDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDlfqIFNNLIYKNEVNLFFVTLCALLLFCGSVAK 240
Cdd:PRK06590 154 LIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDE---VFAAAPQFFGLGWSALTLICLLLFIGAMGK 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLA 320
Cdd:PRK06590 231 SAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLA 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 321 YSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVLMGGLTKHAPITKTSFLI 400
Cdd:PRK06590 311 YSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAM--------HHEQDIRKMGGLRKKMPVTYATFLI 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 401 GTLSLCGIPPFACFWSKDEILNDSWLYSPIFA-IIACSTAGLTAFYMFRIYLLVFegylnvhfqnfngkknssfysislw 479
Cdd:PRK06590 383 GTLALIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFYSFRLIFLVF------------------------- 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 480 gkeekkklknkihllallttnnnertsffrkrtysnrinrnvksirrlfldstyFGTKNIPFFYPHESDNTMLFSMLVLV 559
Cdd:PRK06590 438 ------------------------------------------------------HGKEKEKIHHPHESPAVMTLPLIVLA 463
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 560 LFTFFVGSIGISFsqepinldiLSKLLIPSIDLLHQNSKNSVdwyeFFTNATFSVSIAFFGIFIASFFYkpvfsslqnln 639
Cdd:PRK06590 464 VLSVFAGALIVPP---------FLGVLPLTTELAHGEAEHHL----PVWVALLPLVVALAGIALAWLLY----------- 519
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 640 lfnLFQKSVPKKIIAdkIINVIYDWSYNRGYIDAFFEVSLIASVRKVAKF-NYFFDRQVIDGIPNGIGISSFFIGEAIKY 718
Cdd:PRK06590 520 ---LKKPTLPTSIAA--PGRFLYTLLRNKYYFDELYEKVFVKPGLALARLlWKDGDDGIIDGLVPNSARLVGGGSRVLRR 594
|
730 740
....*....|....*....|....*..
gi 1678641912 719 VGGGRISSYIFFFVL-IFLVISYYIFI 744
Cdd:PRK06590 595 LQTGYLRHYAASMLIgAVVLLALLLLV 621
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
44-733 |
9.79e-150 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 449.81 E-value: 9.79e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 44 SILLLTIVMIFSIDLSIHQIENSSIYQYVWSWTINNDLSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLR 123
Cdd:TIGR01974 36 SVGLSAALSAFVFVDFFLNGEGEAFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 124 FFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSL 203
Cdd:TIGR01974 116 FFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 204 EFRDLFQIFNNLIYKnevnlfFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 283
Cdd:TIGR01974 196 NFQEVFALAPGAFFS------ALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPL 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 284 FIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSI 363
Cdd:TIGR01974 270 FELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSV 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 364 IHSMEaivgyspdKSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEILNDSW--LYSPIFAIIACSTAGL 441
Cdd:TIGR01974 350 IHAMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIGAFL 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 442 TAFYMFRIYLLVfegylnvhfqnFNGKKNSSFYSislwgkeekkklknkihllallttnnnertsffrkrtysnrinrnv 521
Cdd:TIGR01974 422 TAFYSFRLIFMV-----------FHGKERHEADA---------------------------------------------- 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 522 ksirrlfldstyfgtknipffYPHESDNTMLFSMLVLVLFTFFVGSIGISFsqepinLDILSKLLIPSIDllHQNSKNSV 601
Cdd:TIGR01974 445 ---------------------HPHESPLVMLLPLIVLAVGSVFAGFFIVPL------FEFLKGVLPTSAE--PALEHHHV 495
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 602 DWYEfftnATFSVSIAFFGIFIASFFYkpvfssLQNLNLFNLFQKSVPKkiiadkiinvIYDWSYNRGYIDAFFEVSLIA 681
Cdd:TIGR01974 496 PALE----IWSPTAVAILGILLAYLLY------LGNPTLPAKIAQRHSG----------LYRLLLNKWYFDELYDKVFVK 555
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|...
gi 1678641912 682 SVRKVAKFNYFF-DRQVIDGIPNGIGISSFFIGEAIKYVGGGRISSYIFFFVL 733
Cdd:TIGR01974 556 PYLFLGKLLWKDpDDKIIDGFGPGIARLVGAISKRLRKSQTGYLRWYAASMVV 608
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
448-694 |
6.35e-128 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 380.03 E-value: 6.35e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 448 RIYLLVFEGYLNVHFQNFNGKKNSSFYSISLWGKEEKKKLKNKIHLLALLTTNNNERTSFFRKRTYsnRINRNVKSIRRL 527
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTLLLLTMNNNEKVSFFSKKTY--RIDGNVRNMTRP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 528 FLDSTYFGTKNIpFFYPHESDNTMLFSMLVLVLFTFFVGSIGISFSQEPINLDILSKLLIPSIDLLHQNSKNSVDWYEFF 607
Cdd:pfam01010 79 FITITHFDNKKT-FSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQEGIDLDILSKWLTPSINLLHKNSNNSVDWYEFV 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 608 TNATFSVSIAFFGIFIASFFYKPVFSSLQNLNLFNLFQKSVPKKIIADKIINVIYDWSYNRGYIDAFFEVSLIASVRKVA 687
Cdd:pfam01010 158 TNAIFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLA 237
|
....*..
gi 1678641912 688 KFNYFFD 694
Cdd:pfam01010 238 ELTHFFD 244
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
63-474 |
4.86e-107 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 339.29 E-value: 4.86e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 63 IENSSIYQYVWSWTINNDLSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSS 142
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 143 NLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNLIYKNEVn 222
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 223 lffvTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITV 302
Cdd:MTH00210 211 ----TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 303 VLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMV 382
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMR 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 383 LMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEILNDSW-LYSPIFAI-IACSTAGLTAFYMFRIYLLVFEGYLNV 460
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdKYYIAFAYwLGSFSALLTAFYSIRLIYLTFITNTNS 438
|
410
....*....|....
gi 1678641912 461 HFQNFNGKKNSSFY 474
Cdd:MTH00210 439 KKEVFIGVHESSWN 452
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
47-473 |
4.73e-106 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 336.66 E-value: 4.73e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 47 LLTIVMIFSIDLSIHQIENSS-IYQYVWSWTINNDLSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFF 125
Cdd:MTH00020 35 CLIISLSWSFLIFYEILFNSStTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFM 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 126 TYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEF 205
Cdd:MTH00020 115 SYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDF 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 206 RDLFQIFNNLIYKNevnlffVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFI 285
Cdd:MTH00020 195 SSVFNMVVSAPSSD------ITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFE 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 286 VIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIH 365
Cdd:MTH00020 269 QAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIH 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 366 SMeaivgyspDKSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEILNDSWL-YSPIFAI-IACSTAGLTA 443
Cdd:MTH00020 349 AL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFSALLTA 420
|
410 420 430
....*....|....*....|....*....|
gi 1678641912 444 FYMFRIYLLVFEGYLNVHFQNFNGKKNSSF 473
Cdd:MTH00020 421 FYSIRLIYLTFLSNTNLKKAVFFHLHEGDW 450
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
20-460 |
2.96e-87 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 286.85 E-value: 2.96e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 20 ILIGVGLLLfptaTNNIRRMWAFPSILLLTIVMIFSIDLSIHQIENSSIYQyvWSWTINNDLSLEFGYLIDSLTSIMSIL 99
Cdd:MTH00211 14 ILLLLPLLL----PLNNSKLHIKKAVKLSFFISLIPLLIFLDQGLETILTN--WSWINLGLFSLNLSFKFDFYSIFFTSV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 100 ITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAF 179
Cdd:MTH00211 88 ALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 180 VTNRVGDFGLLLGILGFYWITGSLEFRDLFqifnnliykneVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTP 259
Cdd:MTH00211 168 IYNRIGDIGLLLSMVWLLLNLNSWEISQLF-----------ILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 260 ISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSY 339
Cdd:MTH00211 237 VSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 340 RAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDE 419
Cdd:MTH00211 317 QLAFLHICTHAFFKAMLFMCSGSIIHGL--------NNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDL 388
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 1678641912 420 IL---NDSWLYSPIFAIIACSTaGLTAFYMFRIYLLVFEGYLNV 460
Cdd:MTH00211 389 ILesmNGSYLNAWALLLTLLAT-SLTAAYSFRLIFLSLGGYPRF 431
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
6-743 |
6.39e-86 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 283.72 E-value: 6.39e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 6 QYSWIIPFIPLpvpilIGvGLLLFPTATNNIRRMWAFPSI---LLLTIVMIFSIDLSIHQIENSSIYQYVWSWTINNDLS 82
Cdd:PRK07390 7 QTSWLIPLYGL-----IG-ALLSLPWSPGIIRRTGPRPAAylnLLMTLLAFVHSLLALRAIWNQPPQQLSFPWLQVADLD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 83 LEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLI 162
Cdd:PRK07390 81 LSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLLV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 163 GFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNliykNEVNLFFVTLCALLLFCGSVAKSA 242
Cdd:PRK07390 161 GFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAAT----ANLDPLTATLLGLALIAGPTGKCA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 243 QFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYS 322
Cdd:PRK07390 237 QFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYS 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 323 TMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSmeaivgyspDKSQNMVLMGGLTKHAPITKTSFLIGT 402
Cdd:PRK07390 316 TSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT---------TITQDLTELGGLWSRMPATTLAFLVGS 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 403 LSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGylnvhfqnfngkknssfysislwgke 482
Cdd:PRK07390 387 AGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVFRLVFLG-------------------------- 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 483 ekkklknkihllallttnnnertsffrkrtysnriNRNVKSIRrlfldstyfgTKNIPFfyphesdnTMLFSMLVLVLFT 562
Cdd:PRK07390 441 -----------------------------------KPQQKTRR----------SPEVLW--------PMALPMVILAGFT 467
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 563 ffvgsigisfsqepinldILSKLLIPSIDLLhqnsknsVDWYEFFTNATFSVSIA-FFGIFIASFFYkpvfsslqnlnLF 641
Cdd:PRK07390 468 ------------------LHLPLLLQQWGLL-------PSWEALNLWAAPLLVASgLLGVLLGAWIY-----------LN 511
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 642 NLFQKSVPKKiiadkiINVIYDWSYNRGYIDAFFEVSLIASVRKVAKFNYFFDRQVIDGIPNGIGISSFFIGEAIKYVGG 721
Cdd:PRK07390 512 KAWSRPIQLP------LRFLQDLLAYDFYTDRLYRLTIVFVVALISRLTAWFDRYVVDGLVNLVGLATLFSGQGLKYSVS 585
|
730 740
....*....|....*....|..
gi 1678641912 722 GRISSYIFFFVLIFLVISYYIF 743
Cdd:PRK07390 586 GQSQFYVLTILLGVALLGALLL 607
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
10-421 |
3.54e-83 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 277.99 E-value: 3.54e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 10 IIPFIPLPVPILIGVGLLLFPTATNNIRRMWAFPSILLLTIVMIFSIdlsihQIENSSIYQYVWSWTINNDLSLEFGYLI 89
Cdd:MTH00032 4 LVLLLPFINAFLLGFFGRLIGTIGSGILSTICMGSSTLIALFLAYEV-----LINDAVVHIELYKWIESEIFITHIGLLY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 90 DSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRP 169
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 170 IAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDL------FQIFNNLIYKNEVNLF----FVTLcALLLFCGSVA 239
Cdd:MTH00032 159 QANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgSGIMDRGYYGGGAYESplapFAII-GILLLIGCIG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNL 319
Cdd:MTH00032 238 KSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVI 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 320 AYSTMSQLGYMMLALGM-GSYRAALFHLITHAYSKALLFLGSGSIIHSMEAivgyspdKSQNMVLMGGLTKHAPITKTSF 398
Cdd:MTH00032 318 AYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-------DEQDMRKMGGLIHSIPFTYTMM 390
|
410 420
....*....|....*....|...
gi 1678641912 399 LIGTLSLCGIPPFACFWSKDEIL 421
Cdd:MTH00032 391 LIGSFSIMGLPYLTGFYSKDLIL 413
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
141-440 |
1.09e-79 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 256.86 E-value: 1.09e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 141 SSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNLIYKNE 220
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 221 VNlffvtLCALLLFCGSVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLF-IVIPPIMSVIALIG 298
Cdd:pfam00361 81 LL-----LLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlPSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 299 IITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgysp 375
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRV------- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1678641912 376 dKSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAG 440
Cdd:pfam00361 228 -HTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
10-457 |
1.43e-79 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 266.26 E-value: 1.43e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 10 IIPFIPLPVPILIGVGLLLFPTATNNIRR--MWAFPSILLLTIVMIFsidlsiHQIENSSIYqyvWSWTINNDLSLEFGY 87
Cdd:MTH00004 10 LLTLLILLTPILLPLLSKNLKNSPTTIKTtvKLAFLISLIPLTLFLN------SGTESITTN---WPWIFTTTFNIPISF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 88 LIDSLtsimSILITTVGILV----LIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIG 163
Cdd:MTH00004 81 KLDQY----SLMFLPIALFVtwsiLEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 164 FWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFqifnnliYKNEVNlffvTLCALLLFCGSVAKSAQ 243
Cdd:MTH00004 157 WWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLF-------SPTQTP----TLPLLGLILAATGKSAQ 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 244 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYST 323
Cdd:MTH00004 226 FGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFST 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 324 MSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVLMGGLTKHAPITkTSFL-IGT 402
Cdd:MTH00004 306 SSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQKTLPIT-SSCLtIGN 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1678641912 403 LSLCGIPPFACFWSKD---EILNDSWLYSPIFAIIACSTAgLTAFYMFRIYLLVFEGY 457
Cdd:MTH00004 377 LALMGTPFLSGFYSKDtiiETLNTSYLNAWALLLTLLATS-FTAAYSLRMILLVQTGF 433
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
73-449 |
3.44e-77 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 259.84 E-value: 3.44e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 73 WSWTINNDLSLEFGYLIDsltsIMSILITTVGILV----LIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVY 148
Cdd:MTH00066 64 FHWMNIFNFNINSSFKFD----QYSIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLF 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 149 IFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNliyknevnlffVTL 228
Cdd:MTH00066 140 IGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLNDN-----------STL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 229 CALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATL 308
Cdd:MTH00066 209 PLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAAC 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 309 AIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVLMGGLT 388
Cdd:MTH00066 289 ALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQ 360
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1678641912 389 KHAPITKTSFLIGTLSLCGIPPFACFWSKDEI---LNDSWL--YSPIFAIIACStagLTAFYMFRI 449
Cdd:MTH00066 361 KALPITTSCLTIGSLALTGTPFLAGFFSKDAIieaMNTSNLnsWALILTLIATS---FTAVYSFRI 423
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
11-453 |
7.42e-76 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 251.22 E-value: 7.42e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 11 IPFIPLPVPILIGVGLLLFPtatNNIRRMWAFpSILLLTIVMIFSIDLSIHQIENSSIYQYVWSWTinndLSLEFGYLID 90
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLG---RRRRLQRAL-SLLASLALLALALALLLQVLAGGPLVYALGGWP----APFGIVLVAD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 91 SLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPi 170
Cdd:COG0651 76 RLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE- 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 171 AANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFnnliykNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWL 250
Cdd:COG0651 155 ALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHFWL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 251 PDAM-EGPTPISALIHAAtMVAAGIFLVARLLPLFI---VIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQ 326
Cdd:COG0651 229 PDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 327 LGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKHAPITKTSFLIGTL 403
Cdd:COG0651 308 IGYILLGLGLGTPLglaGALFHLLNHALAKALLFLAAGAIERAT---------GTRDLDKLGGLGKRMPLTAAAFLIGAL 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1678641912 404 SLCGIPPFACFWSKDEILN---DSWLYSPIFAIIACStaGLTAFYMFRIYLLV 453
Cdd:COG0651 379 ALAGLPPLSGFVSKWLLLQaalEAGAWLLAAVLLLSS--LLTLAYFVRIFGRA 429
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
60-453 |
7.44e-75 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 257.54 E-value: 7.44e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 60 IHQIENSSIYQYVWSWTinNDLSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLV 139
Cdd:PRK12647 35 IPEIAAGETVRGGYAWV--PSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 140 TSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQiFNNLIYKN 219
Cdd:PRK12647 113 LSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREH 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 220 EvnlfFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGI 299
Cdd:PRK12647 192 P----LYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGG 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 300 ITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSmeaiVGyspd 376
Cdd:PRK12647 268 LTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHE----TG---- 339
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1678641912 377 kSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEILnDSWLYSPIFAIIACSTAGLTAFYMFRIYLLV 453
Cdd:PRK12647 340 -TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIY-EALLEAPLWSLILTVAAVLGNALMVAVAFLV 414
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
73-457 |
1.99e-74 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 252.83 E-value: 1.99e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 73 WSW----TINNDLSLEFGYLidsltsimSILITTVGILV----LIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNL 144
Cdd:MTH00137 70 WNWmntlTFDINISFKFDHY--------SIIFTPIALYVtwsiLEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNM 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 145 IQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLllgILGFYWITGSLEFRDLFQIFnnlIYKNEVNLf 224
Cdd:MTH00137 142 FQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGL---ILAMAWMATNLNSWEIQQIF---ALSKDFDL- 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 225 fvTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVL 304
Cdd:MTH00137 215 --TLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLF 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 305 GATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVLM 384
Cdd:MTH00137 293 TATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKM 364
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1678641912 385 GGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEI---LNDSWL--YSPIFAIIACStagLTAFYMFRIYLLVFEGY 457
Cdd:MTH00137 365 GGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIieaLNTSHLnaWALTLTLIATS---FTAVYSLRVVFFVSMGH 439
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
44-454 |
1.16e-72 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 248.35 E-value: 1.16e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 44 SILLLTIVMIFSIDLSIHQIENS--SIYQYVWSWTINNDLSLEFGYLIDSLtsimSILITTVGILV----LIYSDSYMSH 117
Cdd:MTH00208 58 SISLLKTLAFLSLINLLIWILLGcpNINISLSNWLSNTLFNFSLSFIFDFY----FILFFSVALFVtwsiIEFSHYYMSN 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 118 DQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFY 197
Cdd:MTH00208 134 DPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSL 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 198 WITGSLEFrdlfqifNNLIYKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLV 277
Cdd:MTH00208 214 INFNSWNL-------NEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 278 ARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLF 357
Cdd:MTH00208 287 IRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLF 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 358 LGSGSIIHSMeaivgyspDKSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEIL-----NDSWLYSPIFA 432
Cdd:MTH00208 367 LCSGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSIILA 438
|
410 420
....*....|....*....|..
gi 1678641912 433 IIACStagLTAFYMFRIYLLVF 454
Cdd:MTH00208 439 LIATL---LTAVYSFRIIFFCF 457
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
20-456 |
5.85e-72 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 245.92 E-value: 5.85e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 20 ILIGVGLLLFPTATN--NIRRMWAFPSILLLTIVMIFSIDLS-----IHQIENSSIYQyvWSW----TINNDLSLEFGYL 88
Cdd:MTH00108 8 TLLTLLILTLPIIMTltNPYKTNNYPLYVKTTISYAFIISLIptmmfIHSGQEMIISN--WHWmtiqTLKLSLSFKLDYF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 89 idsltsimSILITTVGILV----LIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGF 164
Cdd:MTH00108 86 --------SMIFIPVALFVtwsiMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 165 WFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRdlfQIFnnLIYKNEVNLffvTLCALLLfcGSVAKSAQF 244
Cdd:MTH00108 158 WYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQ---QIF--MLNPNNSNL---PLMGLLL--AATGKSAQF 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTM 324
Cdd:MTH00108 228 GLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTS 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 325 SQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspDKSQNMVLMGGLTKHAPITKTSFLIGTLS 404
Cdd:MTH00108 308 SQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLA 379
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1678641912 405 LCGIPPFACFWSKD---EILNDSwlYSPIFA----IIACStagLTAFYMFRIYLLVFEG 456
Cdd:MTH00108 380 LTGMPFLTGFYSKDliiEAANTS--YTNAWAllitLIATS---LTAAYSTRIIFFALLG 433
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
81-417 |
3.08e-69 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 242.91 E-value: 3.08e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 81 LSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYL-RFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSY 159
Cdd:PRK12645 68 LGINFTLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 160 LLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDlfqIFNNLIYKNEVNLFfvTLCALLLFCGSVA 239
Cdd:PRK12645 148 LLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIRE---MIANADEIQNSPLF--IPAMILILLGAFT 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNL 319
Cdd:PRK12645 223 KSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGIL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 320 AYSTMSQLGYMMLALGMGS----------------YRAALFHLITHAYSKALLFLGSGSIIHSmeaiVGyspdkSQNMVL 383
Cdd:PRK12645 303 AFSTVSQLGLIMSLLGIGAaslhyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHE----TG-----TRDIRK 373
|
330 340 350
....*....|....*....|....*....|....
gi 1678641912 384 MGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSK 417
Cdd:PRK12645 374 LGGLMTIMPITFTIALIGALSMAGLPPFNGFLSK 407
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
81-456 |
1.64e-66 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 235.13 E-value: 1.64e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 81 LSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYL 160
Cdd:TIGR00940 65 LGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNLiyknEVNLFFVTLCALLLFcGSVAK 240
Cdd:TIGR00940 145 LISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAI----RNSPLFGTAMVLVLL-GAFTK 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLA 320
Cdd:TIGR00940 220 SAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILA 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 321 YSTMSQLGYMMLALGMGS----------------YRAALFHLITHAYSKALLFLGSGSIIHSmeaivgyspDKSQNMVLM 384
Cdd:TIGR00940 300 FSTISQLGLIMVLLGLGSpsyhyqgddskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHE---------TGTRDIRKL 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 385 GGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEILN-------------DSWLYspIFAIIACSTAGLTAFYMFRIYL 451
Cdd:TIGR00940 371 GGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAeaitahlvnpfdtVTLGY--LFPYVATVASVFTFVYSLRFIH 448
|
....*
gi 1678641912 452 LVFEG 456
Cdd:TIGR00940 449 GVFFG 453
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
81-456 |
1.52e-65 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 234.70 E-value: 1.52e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 81 LSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYL 160
Cdd:PRK12648 66 LGLNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIfNNLIYKNEvnLFFVTLCALLLfcGSVAK 240
Cdd:PRK12648 146 LIGYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVLAA-GDLIRAHP--LYPPALVLILL--GAFTK 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLA 320
Cdd:PRK12648 221 SAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 321 YSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMVLMGGLTKHAPITKTS 397
Cdd:PRK12648 301 YSTISHLGLITLLLGLGSplaAVAAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITATL 371
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1678641912 398 FLIGTLSLCGIPPFACFWSK----DEILNDSWLYS-----PIFAIIAcstAGLTAFYMFRIYLLVFEG 456
Cdd:PRK12648 372 AMVAAAAMAGVPLLNGFLSKemffAETLDTHLLGSldwllPVAATLA---GAFSVAYSLRFIHDVFFG 436
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
18-454 |
1.64e-65 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 225.24 E-value: 1.64e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 18 VPILIGVGLLLFPTATNNIRRMWAFPSILLLTIVMIFSIDLSIHQIENSSIYQYVWSWtinNDLSLeFGYLIDSLTSIMS 97
Cdd:PRK06525 6 LTLLLPFIGALVVFFLPGRRAAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNL---GDVAL-FGLVIDPVSVLIG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 98 ILITTVGILVLIYSDSYMS-------HDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTrPI 170
Cdd:PRK06525 82 FVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 171 AANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNLiyknevnlffVTLCALLLFCGSVAKSAQFPLHVWL 250
Cdd:PRK06525 161 ALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSL----------KYLVFLGILFAAWGKSAQLPFYSWL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 251 PDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMS-VIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGY 329
Cdd:PRK06525 231 PDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGyVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGY 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 330 MMLALGMGSY------RAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKHAPITKTSFLIGTL 403
Cdd:PRK06525 311 MFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSC---------GTRLLPRLRGVLKKLPLVGVGFCVAAL 381
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1678641912 404 SLCGIPPFACFWSKDEIL-------NDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVF 454
Cdd:PRK06525 382 AITGVPPFNGFFSKFPIFaagfelsVEYWILLPAMVLLLIESVASFAWFLRWFGRVVF 439
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
71-448 |
2.39e-64 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 231.35 E-value: 2.39e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 71 YVWSWTinNDLSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYL-RFFTYLSFFNTSMLGLVTSSNLIQVYI 149
Cdd:PRK12644 56 EVVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 150 FWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNLIYknevnlffVTLC 229
Cdd:PRK12644 134 FWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPPTGPA--------VSVA 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 230 ALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLA 309
Cdd:PRK12644 206 VVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRA 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 310 IAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHL---ITHAYSKALLFLGSGSIIHSmeaiVGyspdkSQNMVLMGG 386
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHS----TG-----TRDIRKLSG 356
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1678641912 387 LTKHAPITKTSFLIGTLSLCGIPPFACFWSK----DEILNDSWLYSPIFAIIACSTAG--LTAFYMFR 448
Cdd:PRK12644 357 LGRRQPVLAVVAALAAASMAGLPPLLGFVAKeaalEAVLHDGALGPAGPVVLAGIVLGsiLTVAYSLR 424
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
83-418 |
1.27e-62 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 224.32 E-value: 1.27e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 83 LEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLI 162
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 163 GFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNLIYKNEVNLFFVTLcaLLLFCGSVAKSA 242
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITL--ILIFIGAAAKSA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 243 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYS 322
Cdd:PRK12649 230 QGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 323 TMSQLGYMMLALGMGSYR-------AALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMVLMGGLTKHAPITK 395
Cdd:PRK12649 310 TISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAH--EA-------ATRDIRKLGGLRKEMPITF 380
|
330 340
....*....|....*....|...
gi 1678641912 396 TSFLIGTLSLCGIPPFACFWSKD 418
Cdd:PRK12649 381 IVASIAALAMAGIPPLNGFLSKE 403
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
44-478 |
1.03e-59 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 211.54 E-value: 1.03e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 44 SILLLTIVMIFSIDLSIHQIENSSIYQYVWSWTINNDLSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLR 123
Cdd:MTH00165 7 SFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 124 FFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIgFWFTRPIAANACQKAFVTNRVGDFGLLLGIlGFYWITGSL 203
Cdd:MTH00165 87 FIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSI-AWMMNFGSW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 204 EFrdlfqIFNNLIYKNEVNLFFVTLcalLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPL 283
Cdd:MTH00165 165 NF-----IFYLDFMKNSFEMLLIGL---LIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 284 FIvIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSI 363
Cdd:MTH00165 237 LF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSI 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 364 IHSMeaivgyspDKSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKD---EILNDSWLYSPIFAIIACSTaG 440
Cdd:MTH00165 316 IHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVSMSNLNFFIFFLFFFST-G 386
|
410 420 430
....*....|....*....|....*....|....*...
gi 1678641912 441 LTAFYMFRIYLLVFEGYLNvHFQNFNGKKNSSFYSISL 478
Cdd:MTH00165 387 LTVSYSFRLIYYSMSGDFN-LKSLNNLSDESKFMLKSM 423
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
81-418 |
1.06e-57 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 210.38 E-value: 1.06e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 81 LSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYL-RFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSY 159
Cdd:PRK12646 68 LDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 160 LLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNLiyKNEVNLFFVTLCALLlfcGSVA 239
Cdd:PRK12646 148 LLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHI--KNHGLFIPMIFMFLL---GAFT 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 240 KSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNL 319
Cdd:PRK12646 223 KSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGIL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 320 AYSTMSQLGYMMLALGMG-----------------SYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMV 382
Cdd:PRK12646 303 AYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEA---------GTRDIR 373
|
330 340 350
....*....|....*....|....*....|....*.
gi 1678641912 383 LMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKD 418
Cdd:PRK12646 374 ILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKE 409
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
44-474 |
2.17e-57 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 205.08 E-value: 2.17e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 44 SILLLTIVMIFSIDLSIHQIENSSiyqYVWSWTINN--DLSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGY 121
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGIS---LIFEWELLSvsSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 122 LRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFvTNRVGDFGLLLGILGFywitg 201
Cdd:MTH00151 85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTAL-TNRIGDVLILLSIALL----- 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 202 slefrdLFQIFNNLIYKNEVNLFFvtLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 281
Cdd:MTH00151 159 ------VLLGHWSILSMWDFKLSG--WLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFF 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 282 PLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSG 361
Cdd:MTH00151 231 PFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAG 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 362 SIIHSMeaivgyspDKSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEILN---DSWLYSPIFAIIACST 438
Cdd:MTH00151 311 SIIHSS--------SGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILEsslMSPTSLLMVLLMFVGV 382
|
410 420 430
....*....|....*....|....*....|....*.
gi 1678641912 439 aGLTAFYMFRIYLLVFEGYLNVHFqnFNGKKNSSFY 474
Cdd:MTH00151 383 -GLTALYSARLSFCLVWGSMKSSS--LSSKSDEDFY 415
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
45-471 |
5.38e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 201.03 E-value: 5.38e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 45 ILLLTIVMIFSIDLSIHQIENSSIYQYVWSWTINNDLSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRF 124
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 125 FTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPiAANACQKAFVTNRVGDFGLLLGILGFywitgsLE 204
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSK-SLSAGMLTALTNRVGDALLILSIAWM------LM 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 205 FRDLfqifnNLIYKNEVNLFFVTLCALLLFCGSVaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLF 284
Cdd:MTH00209 159 HGNW-----NIFYLNFNSNLGSVISVLIVLAAMT-KSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 285 IVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSII 364
Cdd:MTH00209 233 FSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNII 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 365 HSMEaivgyspdKSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEILnDSWLYS--PIFAIIACSTA-GL 441
Cdd:MTH00209 313 HSHG--------HSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESnmPIMTLILMFLStSL 383
|
410 420 430
....*....|....*....|....*....|
gi 1678641912 442 TAFYMFRIYLLVFEGYLNVHFQNFNGKKNS 471
Cdd:MTH00209 384 TAAYSMRLSYFSLWGPNSSKSLNSSFDQNK 413
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
18-465 |
5.98e-54 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 193.76 E-value: 5.98e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 18 VPILIGVGLLLFPTATNNIRRMWAFPS---ILLLTIVMIFSIDLSIHQienssiYQYVWSWTINNDLSLEFGYLIDSLTS 94
Cdd:COG1008 12 LPLLGALLLLLLPRRNARLARWVALAVsllTLLLSLYLLAGFDPGTGG------FQFVESYPWIPSLGISYHLGVDGISL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 95 IMSILITTVGILVLIYSDSYMSHDQGylRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFW--FTRPIAA 172
Cdd:COG1008 86 PLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIYAA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 173 NacqKAFVTNRVGDFGLLLGILGFYWITGSLEFrDLFQIfnnliYKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPD 252
Cdd:COG1008 164 I---KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAEL-----AAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPD 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 253 A-MEGPTPISAlIHAATMVAAGIFLVARL-LPLFivipP-----IMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMS 325
Cdd:COG1008 235 AhVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF----PeasayFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVS 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 326 QLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKHAPITKTSFLIGT 402
Cdd:COG1008 310 HMGFVLLGIFALnplGLQGAVLQMVSHGLITAALFLLVGVLYDRT---------HTRDIADLGGLAKRMPVLAALFLLAA 380
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1678641912 403 LSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYLNVHFQNF 465
Cdd:COG1008 381 LASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAEL 443
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-456 |
6.23e-53 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 190.86 E-value: 6.23e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 14 IPLPVPI-LIGVGLLLFPTATNNIRRMWAF-PSILLLTIVMIFSIDLSIHQIENSSIYQYVWSWTInndlslefGYLIDS 91
Cdd:PRK08375 6 LPLLVAVpLLAAALIVLLPKRRRLRWALALlVAALTFALAISLLPQVLDGGVIAYVVGGWPPGIGI--------ELRADS 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 92 LTSIMSILITTVGILVLIYSDSYMSHDQGylRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPiA 171
Cdd:PRK08375 78 LSALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRR-A 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 172 ANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNnliyknEVNLFFVTLcALLLFCGSVaKSAQFPLHVWLP 251
Cdd:PRK08375 155 LAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF-GFVLLALAL-KAAVFPLHTWLP 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 252 DAMEGPTPISALIHAATMVAAGIFLVARLL-----PLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQ 326
Cdd:PRK08375 227 RAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQ 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 327 LGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMVLMGGLTKHAPITKTSFLIGTL 403
Cdd:PRK08375 307 MGYILLGLALLTPLalaAGLLHLLHHALMKGALFLAAGAI----EVTYG-----TRRLSELSGLGRRMPLTAAAFAVASL 377
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1678641912 404 SLCGIPPFACFWSKDEIL---NDSWLYSPIFAIIACSTagLTAFYMFRIYLLVFEG 456
Cdd:PRK08375 378 SLIGVPPTSGFVSKWYLVvgaVEAGQWLVLAVLLASSL--LALLYFLRIWYRAFFG 431
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
18-456 |
8.05e-53 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 191.34 E-value: 8.05e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 18 VPILIGVGLLLFPTATNNIRRMWAFPSILLLTIVMIFSIdlsihqienSSIYQYVWSWTINNDLSLEFG---------YL 88
Cdd:PRK12667 9 TPILLVLFAFLLPLLSILLKGNRKIQKIYALLVSLITLI---------LSILLFIQVYSSNKPIVYLFGgwpapigivYE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 89 IDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTR 168
Cdd:PRK12667 80 VDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 169 PIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNLIYKNEV----NLFFVTLCALLLFCGSVA-KSAQ 243
Cdd:PRK12667 160 GDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGglagNPPLALGVALALALWAFTiKAAI 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 244 FPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL--------PLFIVIPPIMSVIALIGIITVVLGATLAIAQKD 314
Cdd:PRK12667 240 FPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 315 IKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKHA 391
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDELAGLGRKM 389
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1678641912 392 PITKTSFLIGTLSLCGIPPFACFWSKdEILNDSWLYS--PIFAIIACSTAGLTAFYMFRIYLLVFEG 456
Cdd:PRK12667 390 PIASFAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-456 |
1.47e-51 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 188.00 E-value: 1.47e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 10 IIPFIpLPVPILIGVGLLLFPTATNNIRRMWAfpsILLLTIVMIFSIDLSIHQIENSSIYqYVWSWTiNNDLSLEFGYL- 88
Cdd:PRK08376 6 LPPLL-IIIPLFGAFSMPIVSLLGGKAREIWA---VLISFLTLIVALLVFYEVWNNGTIV-YVLGAE-SPTLTLPFGSGg 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 89 --------IDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYL 160
Cdd:PRK08376 80 fpiriiweVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEfrdlfqiFNNLIYKNEVNLFFVTLCALLLFCGSVA- 239
Cdd:PRK08376 160 LVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLN-------MAYLAVKMSENPTVVAKIALALFIAGLAm 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 240 KSAQFPLHVWLPDAM-EGPTPISALIHAATmvAAGIFLVARLlpLFIVIPPIMS------VIALIGIITVVLGATLAIAQ 312
Cdd:PRK08376 233 KSGAVPVHMWLPDAYpAAPSSISAMLLVIK--QAGLYALARV--LFSIYGPAINlatvgwVIIILGCLTMFVGVAMAVVQ 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 313 KDIKKNLAYSTMSQLGYMMLALGMG---------------SYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdK 377
Cdd:PRK08376 309 KDVKRLLAYHSVSQIGYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYET---------G 379
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1678641912 378 SQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEG 456
Cdd:PRK08376 380 TRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
26-453 |
6.51e-51 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 187.28 E-value: 6.51e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 26 LLLFPTATNNIRRMWAF------PSILLLTIVMIFSIDLSIHQIENSSIYqyvwswtinndlsleFGYLIDSLTSIMSIL 99
Cdd:MTH00207 1 LRMFKPSSIASYLLWFMsilmfpLSLYLMMCNKTILIEWEIFTISSSPIN---------------FTIILDPTGTLFSST 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 100 ITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIgFWFTRPIAANACQKAF 179
Cdd:MTH00207 66 VLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITA 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 180 VTNRVGDFGLLLGIL----GFYWITGSLEFRDlfqiFNNLIyknevnlffvtlcALLLFCGSVAKSAQFPLHVWLPDAME 255
Cdd:MTH00207 145 LTNRIGDVMLLLSIGwtlnQGHWSITNMWQTD----MNNYI-------------ALSIMIAAMTKSAQMPFSSWLPAAMA 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 256 GPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALG 335
Cdd:MTH00207 208 APTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLG 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 336 MGSYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdKSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFW 415
Cdd:MTH00207 288 LGMPKLALFHLITHALFKALLFVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFY 359
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1678641912 416 SKDEILNDSWLY---SPIFAIIACSTaGLTAFYMFRIYLLV 453
Cdd:MTH00207 360 SKDLILESSLFYphnSLMILMIFLAT-ALTAAYSTRFTLAV 399
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
16-447 |
1.10e-50 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 191.41 E-value: 1.10e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 16 LPVPILIGVGLLLFPTATNNIRRMWAFPSILLLTIVMIFSIDLSIHQIENSSI-YQYVWSWTI-NNDLSLEFGYLIDSLT 93
Cdd:PRK12650 2 LAVLALAALAVVLAPPLVRVLDRKAGWPLAAIFVAAAGLLLKELPPILDGDALtWSVTWIPDLlGNGVDVNLALRADALS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 94 SIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFwfTRPIAAN 173
Cdd:PRK12650 82 LFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSGGEA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 174 ACQKAFVTNRVGDFGLLLGILGFYWITGSLEfrdLFQIFNNLIYKNevNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDA 253
Cdd:PRK12650 160 GSIRTLILTFFGGLTLLAAVAIAATQTGTTS---LSGILHSDVWAE--KPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEA 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 254 MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLA 333
Cdd:PRK12650 235 MAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVAT 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 334 LGMGS---YRAALFHLITHAYSKALLFLGSGSIIHsmEAivgyspdKSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPP 410
Cdd:PRK12650 315 IGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDH--QA-------GTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPP 385
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 1678641912 411 FACFWSKDEILnDSWLYSPIFA---IIACSTAGLTAFYMF 447
Cdd:PRK12650 386 LFGFVSKEGML-TAFLEAPGGNagvVLLLVGAALGAVFTF 424
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
87-449 |
8.03e-41 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 156.04 E-value: 8.03e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 87 YLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTS-MLGLVTSSNLIQVYIFWELVGMCSYLLIGFW 165
Cdd:COG1007 66 FVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLVAFR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 166 FTRPIAANACQKAFVTnrvGDFG---LLLGILGFYWITGSLEFRDLFQIFNNliykNEVNLFFVTLCALLLFCGSVAKSA 242
Cdd:COG1007 146 RDDRRSSEAALKYFLL---GALSsgfLLYGISLLYGATGSLNLAGIAAALAA----GGANSPLLLLGLVLVLAGLAFKLS 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 243 QFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLL--PLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNL 319
Cdd:COG1007 219 AVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRML 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 320 AYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLgsgsIIhsmeAIVGYSPDKSQNMVLMGGLTKHAPITKT 396
Cdd:COG1007 298 AYSSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEIEDLAGLARRSPLLAL 369
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1678641912 397 SFLIGTLSLCGIPPFACFWSKDEILNDSW---LYspIFAIIACSTAGLTAFYMFRI 449
Cdd:COG1007 370 AMTIFLLSLAGIPPTAGFFGKFYVFSAAVeagLY--WLAVIAVLNSVISAYYYLRV 423
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
89-456 |
2.85e-40 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 157.74 E-value: 2.85e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 89 IDSLTSIMSILITTVGILVLIYSDSYMSHDQGY----LRFFTYLsfFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGF 164
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEGKgpgaMGFFYNL--FLASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 165 WFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLfqifnnliykNEVNL--FFVTLCALLLFCGSVAKSA 242
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAM----------RAAHLspFWASLVFLLALFGFGAKAG 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 243 QFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARllplfIVI----PPIM--SVIAL-IGIITVVLGATLAIAQKD 314
Cdd:PRK06521 226 LVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILR-----VVFdllgAPGWwwGVLVLaLGAISAVLGVLYALAEHD 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 315 IKKNLAYSTMSQLGYMMLALGMG--------------SYRAALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdkSQN 380
Cdd:PRK06521 300 LKRLLAYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATG---------TRD 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 381 MVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEIL--------NDSWLYS---PIFAIIACSTAGLTAFYMFRI 449
Cdd:PRK06521 371 MEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLqsllsspgLPQWGLKlavPIAAAMLALTAALAAMCFVKF 450
|
....*..
gi 1678641912 450 YLLVFEG 456
Cdd:PRK06521 451 YGITFLG 457
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
10-364 |
2.29e-39 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 152.93 E-value: 2.29e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 10 IIPFIPLPVPILIGVGLLLFPTATNNIRRMWAFPSILLLTIVMIFSIDLSIHqienssiyqyvWSWTINNDLSLefgyli 89
Cdd:PRK08168 5 VCALLPAVLMSLAAGGLLLSRWLTRALWRIAQAASLAGLFLALLGLVLFATG-----------AAWPAAAWLEV------ 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 90 DSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRP 169
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 170 IAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNliyknEVNLFFVTLCALLLFCGSVAKSAQFPLHVW 249
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAA-----QGASPSLQAAALLLVLAVILKTAQLPVHGW 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 250 LPDAMEGPTPISALIHAAtMVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGY 329
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF 301
|
330 340 350
....*....|....*....|....*....|....*
gi 1678641912 330 MMLALGMGSYRAALFHLITHAYSKALLFLGSGSII 364
Cdd:PRK08168 302 MLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
87-454 |
2.87e-38 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 148.82 E-value: 2.87e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 87 YLIDSLTSIMSILITTVGILVLIYSDSYMShDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWF 166
Cdd:PRK05777 69 LVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRR 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 167 TRPIAANACQKAFVtnrVGDFG---LLLGILGFYWITGSLEFRDLFQIFNNLIYKNEVNLF-FVTLCALLLFcgsvaKSA 242
Cdd:PRK05777 148 DRRRSLEAAIKYFV---LGALAsgfLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLLFgLVFLLVGLAF-----KLS 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 243 QFPLHVWLPDAMEG-PTPISALIHAATMVAAgiflVARLLPLFIVIPPIMS-----VIALIGIITVVLGATLAIAQKDIK 316
Cdd:PRK05777 220 AVPFHMWTPDVYEGaPTPVTAFLATAPKIAA----FAVLLRLLVVAFGGLSedwqqVLAIIAIASMLVGNLAALSQTNIK 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 317 KNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKallfLGSGSIIHSMEAIVGYSPDKSQnmvlMGGLTKHAPI 393
Cdd:PRK05777 296 RLLAYSSIAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD----FAGLSKRSPL 367
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1678641912 394 TKTSFLIGTLSLCGIPPFACFWSKDEIL------NDSWLyspifAIIACSTAGLTAFYMFRIYLLVF 454
Cdd:PRK05777 368 LAAVMTIFMLSLAGIPPTAGFWGKFYVFeaaveaGLWWL-----AVIGVLNSAIGAFYYLRVIKLMY 429
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
66-417 |
1.09e-37 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 149.38 E-value: 1.09e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 66 SSIYQYVWSWTIN---------NDLSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFfnTSML 136
Cdd:PRK08668 35 PLLFLIKLYFTLKvgtgekltlFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 137 GLVTSSNLIQVYIFWELVGMCSYLLIgfWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNLI 216
Cdd:PRK08668 113 GVFLANDLLTLYIFWEIMTFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLINDT 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 217 yKNEVNLFFVtlcaLLLFCGSVAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLLP---LFIVIPPI 290
Cdd:PRK08668 191 -STGFALIVF----LFLLAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtkLFSEFGTY 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 291 MSV------IALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSG 361
Cdd:PRK08668 266 RGVplfnyiLAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFA 345
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1678641912 362 SIIHSMeaivgyspdKSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSK 417
Cdd:PRK08668 346 AVIYRT---------GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
8-456 |
6.57e-37 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 145.35 E-value: 6.57e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 8 SWIIpFIPLpvpilIGVGLLLF--PTATNNIRR--MWAFPSILLLTIVMIFSIDLSIHQIEnsSIYQYVWSWTINndLSL 83
Cdd:PRK05846 7 SLLI-FLPL-----IGGLLVLLteRFGARLARWiaLIGTLLTLLLSLVLWIGFDSSNAGFQ--FVEKHPWIPRFG--ISY 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 84 EFGylIDSLTSIMSILITTVGILVLIYSDSYMSHDQGylRFFTYLSFFNTSMLGLVTSSNLIQVYIFWE--LVGMcsYLL 161
Cdd:PRK05846 77 HLG--VDGISLLLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEamLIPM--YFL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 162 IGFW--FTRPIAANacqKAFVTNRVGDFGLLLGILGFYWI----TGSLEFRDLfqifnnliYKNEVNLFFVTLCALLLFC 235
Cdd:PRK05846 151 IGVWggKNRIYAAT---KFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADL--------LNLPLPPGVQYWLFLAFFI 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 236 GSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF-LVARLLPLFIVIPPIMS-VIALIGIITVVLGATLAIAQK 313
Cdd:PRK05846 220 AFAVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFPDASHEFApIIITLGVIAIIYGALVALAQT 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 314 DIKKNLAYSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKH 390
Cdd:PRK05846 300 DIKKLIAYSSISHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRL---------HTRDIADYGGLAKV 370
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1678641912 391 APITKTSFLIGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEG 456
Cdd:PRK05846 371 MPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFG 436
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
18-456 |
3.26e-35 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 140.07 E-value: 3.26e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 18 VPILIGVGLLLFPTATNNIRRMWAFPS---ILLLTIVMIFSIDLSIHQienssiYQYVWSWTINNDLSLEFGYLIDSLTS 94
Cdd:TIGR01972 7 LPLIGALLILLLPSNKDGKARWIALVValaTLLLSLLLLFQFDPTGSG------FQFTEDIPWIPALGISYHLGVDGISL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 95 IMSILITTVGILVLIYSDSYMSHDQGYlrFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWfTRPIAANA 174
Cdd:TIGR01972 81 LLVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 175 CQKAFVTNRVGDFGLLLGILGFYWITGslefrDLFQIfnNLIYKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAM 254
Cdd:TIGR01972 158 AMKFFLYTLAGSLLMLLAILGLYFLGG-----GTFDL--LELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAH 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 255 -EGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMS-VIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMML 332
Cdd:TIGR01972 231 vEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFApVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 333 ALGMGSYRA---ALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIP 409
Cdd:TIGR01972 311 GIFSFNELGisgAVFQMISHGLITAALFLLVGVL---------YERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLP 381
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1678641912 410 PFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEG 456
Cdd:TIGR01972 382 GTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFG 428
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-454 |
3.15e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 134.17 E-value: 3.15e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 75 WTINNDLSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFfTYLSFFNTSML---GLVTSSNLIQVYIFW 151
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSS-RFLFFFNLTILigvLIALSSDLFTMFVCY 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 152 ELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDlfqifNNLIYKNEvnlffvTLCAL 231
Cdd:PRK06589 146 ELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVS-----GGLFSKNQ------SIILL 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 232 LLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLpLFIVIPPIMSVIA-------LIGIITVVL 304
Cdd:PRK06589 215 LMFIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKIL-LYIFGLSYLQRIFaefnwliFIPIVSIFY 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 305 GATLAIAQKDIKKNLAYSTMSQLGYMMLALGM---GSYRAALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNM 381
Cdd:PRK06589 294 SSLKALKTDNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQV 364
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1678641912 382 VLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEIL-----NDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVF 454
Cdd:PRK06589 365 DKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLLKILSSIY 442
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
81-454 |
1.16e-31 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 130.04 E-value: 1.16e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 81 LSLEFGYLIDSLtsIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYL 160
Cdd:MTH00095 37 LSLKFNFYFNSL--LFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 161 LIGFWFTrpiaANACQKA---FVTNRVGDFGLLLGILGFywitgslefrdlfqIFNNLIYKNEvnLFFVTLCALLLFCGS 237
Cdd:MTH00095 115 LVLFYNN----WDSNSGAmntALTNRIGDFFIFLFFSGF--------------IFSSYYFFSF--SFFSSSMILMLLLTS 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 238 VAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPpIMSVIALIGIITVVLGATLAIAQKDIKK 317
Cdd:MTH00095 175 FTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMN-VMKIMLLIGLFTMFFSSLSALVEEDMKK 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 318 NLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAivgyspdkSQNMVLMGGLTKHAPITKTS 397
Cdd:MTH00095 254 VVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFG--------QQDGRNYSNNGNLPMFIQLQ 325
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1678641912 398 FLIGTLSLCGIPPFACFWSKDEILNDSWL--YSPIFAIIACSTAGLTAFYMFRIYLLVF 454
Cdd:MTH00095 326 LLVTLFCLCGLMFTSGMVSKELILELFFFnnYMIFFSLMFFFSVFLTFGYSYRLWKSFF 384
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
10-416 |
1.66e-31 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 128.89 E-value: 1.66e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 10 IIPFIPLPVPILIGVGLLLFPtatnnIRRMWAFPSILLLTIVMIFSIDLSIHQIENSSIyqyvwswtinndLSLEFGYLI 89
Cdd:PRK06458 5 ILFALLLLIPLLASLLLFALR-----KRRLVATLNVLGITLTLILALWLVFTVPDAGEI------------FAAGLWFFI 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 90 DSLTSIMSILITTVGILVLIYSDSYMSHDQ-------GYLRFftYLSFFNT---SMLGLVTSSNLIQVYIFWELVGMCSY 159
Cdd:PRK06458 68 DDLNVFFLALIGVVGFLTSLYSIGYMRHEVehgelspVTLRL--YYGMYQLflfTMLLALTSNNLGLMWVAIEATTLSSA 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 160 LLIGFWFTRPiAANACQKAFVTNRVG-DFGLLLGILGFYWITGSLEFRDLFQIFNNLI-YKNEVNLFFVTLCALLLFCGS 237
Cdd:PRK06458 146 LLVGIYRTRA-SLEAAWKYIIICSVGvAFALFGTILVYANAATVMGDGEMAILWTELLkHASLLDPTLMKLAFVFLLIGF 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 238 VAKSAQFPLHVWLPDA-MEGPTPISAL------------IHAATMVAAGIFLVARLLPLFIVIppimsvialiGIITVVL 304
Cdd:PRK06458 225 GTKVGLFPMHAWLPDAhSEAPSPVSALlsgvllnvalyaVLRYYILIDAAIGSDFPGRLLLIF----------GLLSVLV 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 305 GATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNM 381
Cdd:PRK06458 295 AAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQKY---------GTRDI 365
|
410 420 430
....*....|....*....|....*....|....*
gi 1678641912 382 VLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWS 416
Cdd:PRK06458 366 NVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
137-421 |
4.43e-31 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 127.96 E-value: 4.43e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 137 GLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPiAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIfnnli 216
Cdd:PRK08377 123 GMIATGDIFNLFVFMEITAITAYALTAYNKTGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQL----- 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 217 yKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLLPLFIVIPPIMSVIA 295
Cdd:PRK08377 197 -AGTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVLK 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 296 LI---GIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFLGSGSIIHSMea 369
Cdd:PRK08377 275 LViimATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL-- 352
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1678641912 370 ivgyspdKSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEIL 421
Cdd:PRK08377 353 -------GGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRII 397
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-457 |
6.05e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 127.37 E-value: 6.05e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 14 IPLPVPILIGVgLLLFPTATNNIRRMWAFPSILLLtivMIFSIDLSIHQIENSSIYQYVWSWTINNDLSLefgyLIDSLT 93
Cdd:PRK07691 8 LPILIPVITAI-LLIFLGKRPIIQRYVALIGSLLT---LVAAIILVANVYKHGIQTLELGNWKAPFGIVF----VADMFA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 94 SIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRpIAAN 173
Cdd:PRK07691 80 ALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQLR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 174 ACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNLIYKNEVnlfFVTLCALLLFCGSVAKSAQFPLHVWLPDA 253
Cdd:PRK07691 159 ESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFWLPGS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 254 MEGP-TPISALIhAATMVAAGIFLVARLLPLFIVIPPIMS--VIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYM 330
Cdd:PRK07691 236 YYAPpIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFThyLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVI 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 331 MLALGMG---SYRAALFHLITHAYSKALLFLgsgsIIHSMEAIVGYSPDKSqnmvlMGGLTKHAPITKTSFLIGTLSLCG 407
Cdd:PRK07691 315 LVGVAMMtesGMIGAIYYLIHDMIVKAALFL----LIGIMIKITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSLAG 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1678641912 408 IPPFACFWSKDEILNDSWLY-SPIFAIIACSTAGLTAFYMFRIYLLVFEGY 457
Cdd:PRK07691 386 IPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWGE 436
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
20-417 |
7.20e-31 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 128.70 E-value: 7.20e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 20 ILIGVGLLLFPTATN---NIRRMWAFPSILLLTI-VMIFSIDLSIHQIENSSIYQYVWSWTInndlSLEFGYLIDSLTSI 95
Cdd:PRK08667 6 FLGAILLLLAAAVIPlvfRHKRKRVWQSVLWLVIaIALLLFAGSLQLFTGNPLDIPLWGIAP----GLDITFHIDRLAAF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 96 MSILITTVGILVLIYSDSYMSHDQGYLR---FFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAA 172
Cdd:PRK08667 82 FIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 173 NACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLfqifnnliyknEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPD 252
Cdd:PRK08667 162 RAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL-----------GASAGILSLVFLLLFLGFGIKAGIIPFHKWLPY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 253 AMEG-PTPISALIhAATMVAAGIFLVARLLpLFIVIPPIM--SVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGY 329
Cdd:PRK08667 231 AHPAsPSNVSALM-SGVMLKVAVYGLVRFL-MDVLSPELWwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGI 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 330 MMLALG--------------MGSYRAALFHLITHAYSKALLFLGSGSIIHSMeaivgyspdKSQNMVLMGGLTKHAPITK 395
Cdd:PRK08667 309 ILMGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHAT---------GTRNIEKMGGLVKLMPYTS 379
|
410 420
....*....|....*....|..
gi 1678641912 396 TSFLIGTLSLCGIPPFACFWSK 417
Cdd:PRK08667 380 ALFLVGAVSIAALPPFNGFASE 401
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
8-454 |
3.92e-30 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 125.06 E-value: 3.92e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 8 SWIIpFIPLPVPILIGVgLLLFPTATNNIRRMWAFPSILLLTIVmifSIDLSIHQIENSSIYQYVWSWtinndlSLEFG- 86
Cdd:PRK12663 3 SNLL-ILPMLLPLLCGL-VLVFLRNRDRLQRYLAIGTLTILTLI---SLALLIYVQRHGPITLDFGGW------LPPFGi 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 87 -YLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFW 165
Cdd:PRK12663 72 qFTGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 166 FTRPiAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNLiyknEVNLFFVTLCALLLFCGSVaKSAQFP 245
Cdd:PRK12663 152 QERE-QLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDM----GDTATLTTIALLFLLAFGM-KAALFP 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 246 LHvWLPDAMEGP-TPISALIhAATMVAAGIFLVARLLP-LFIVIPPIMS-VIALIGIITVVLGATLAIAQKDIKKNLAYS 322
Cdd:PRK12663 226 FM-WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTlLFPQERELLHpLLATMAAITMVIGALGALAYKDIRRIAGYQ 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 323 TMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIhsmeAIVGYSPDKSqnmvlMGGLTKHAPITKTSFL 399
Cdd:PRK12663 304 VISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLV----RLTGYRSLQY-----LGGLYRKEPLFGALFL 374
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 400 IGTLSLCGIPPFACFWSKDEIL-----NDSWlyspIFAIIACSTAGLTAFYMFRIYLLVF 454
Cdd:PRK12663 375 ILIFAIGGLPPFSGFWGKVLLVqgaldNGAY----ILLALMLITSLITMYSLFRIFFLAY 430
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
19-457 |
5.40e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 121.21 E-value: 5.40e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 19 PILIGVGLLLFPTATNNIRRMWAFPSilLLTIVMIFSidlsihqiensSIYQYVWSWTINNDLSLefgyLIDSLTSIMSI 98
Cdd:PRK07234 12 PFLLGFAIYLLPKLDRNLALGMAIVS--AVYALGLVA-----------SMVPLELTLLDNFGVTL----RADALSGYFIL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 99 LITTVGILVLIYSdsyMSHDQGYLrFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKA 178
Cdd:PRK07234 75 TNALVTLAVIFYC---WESAKTRF-FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVGLRYL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 179 FVTNRVGDFgLLLGILGFYWITGSLEFRDLfqifnnliykNEVNLFFVTLcallLFCGSVAKSAQFPLHVWLPDAMEGPT 258
Cdd:PRK07234 151 FYSNVAMLF-YLIGAVLVYQANGTFAFSGL----------ATADPEAFAL----IALGLLVKGGIFVSGLWLPLTHSEAE 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 259 PISALIHAATMVAAGIFLVARLLPLFIVIPPImsvIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGs 338
Cdd:PRK07234 216 PPVSALLSGVVVKAGVFPLVRCALDVPGLDLI---VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG- 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 339 yraALFHLiTHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMVLMGGLTKHAPITktsflIGTLSLCGIPPFACFWSKD 418
Cdd:PRK07234 292 ---GLYAL-AHGLVKSTLFLCAGAL---------PSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKV 353
|
410 420 430
....*....|....*....|....*....|....*....
gi 1678641912 419 EILndsWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGY 457
Cdd:PRK07234 354 LTL---KNLLPWQAIALNLAAVGTAASFWKFIFLPFSAD 389
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
10-473 |
6.93e-28 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 117.74 E-value: 6.93e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 10 IIPFIPLPVPILIGVGLLLFPTATNNIRRMwAFPSILLLTIVMIFSIDLSIHQIENSSIYQYVWSWTINNDLSLefgyli 89
Cdd:TIGR01770 1 LIAILPEIILLLGAFILLLYGLFYSRKKRN-PLLLKNLSYIVLLSALVSLFLTLQYAAYLFTGFSFFIVDNFAL------ 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 90 dsltSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRP 169
Cdd:TIGR01770 74 ----LIKLILLLSTLLTFFFALSYLSKEKINKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 170 IAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNlIYKNEVNLFfvtLCALLLFCGSVAKSAQFPLHVW 249
Cdd:TIGR01770 150 FSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSN-GMLNISLLL---LGIVLILVGLLFKLSAVPFHMW 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 250 LPDAMEG-PTPISALIHAATMVAA-GIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQL 327
Cdd:TIGR01770 226 VPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHV 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 328 GYMMLALGMGS---YRAALFHLITHAYSKALLFlgsgSIIHSMEAIVGYSPDksqNMVLMGGLTKHAPITKTSFLIGTLS 404
Cdd:TIGR01770 306 GYILIGLLAGTlegIKAVLFYIFIYALMSLGAF----GVLSLLRSYKDEWIE---YISDFAGLFKTNPILAILILIFMFS 378
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1678641912 405 LCGIPPFACFWSKDEIL-----NDSWLYSPIFAIIACstagLTAFYMFRIYLLVFEGYLNVHFQNFNGKKNSSF 473
Cdd:TIGR01770 379 LAGIPPLAGFFGKFYVFfallkSGLYWLAVIAVLTSV----IGAFYYLRVVKVMYFDKPERRIPSNPQSKAQSL 448
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
89-386 |
1.80e-26 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 113.98 E-value: 1.80e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 89 IDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSF--FNTSMLGLvtSSNLIQVYIFWELVGMCSYLLIGFWF 166
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGLNK 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 167 TRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSlefrdlFQIFNNLIYKNEVNL--FFVTLCALLLFCGSVAKSAQF 244
Cdd:PRK08601 148 GWKVAREAAKISGMLFLISWLALALAIVWLFIATGE------WQLTSVLSNENLAQLgtWEKTGINLLLILAVMIPAAQW 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLLPLFIviPPIMSVIALI-GIITVVLGATLAIAQKDIKKNLAYST 323
Cdd:PRK08601 222 PFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFH--DDIAQILLLIfASISVLIGTGISLVQVDYKRQLVGST 298
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1678641912 324 MSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEaIVGYSPDKSQNMVLMGG 386
Cdd:PRK08601 299 MAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN-IVKQANEKKSYLWIVVG 360
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
10-417 |
5.00e-26 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 113.45 E-value: 5.00e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 10 IIPFIPLPVPILIGVGLLLFPTATnniRRMWAFPSILLLTIVMIFSIDLSIHqienssiyqyvwsWTIN---NDLSLefg 86
Cdd:PRK12668 2 MLDFLPPALVFIAGALLVPFLPGR---ARKALLLLAPVLAVLAVLTVPEGTY-------------LTVTflgFDLVL--- 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 87 YLIDSLTSIMSILITTVGILVLIYSdsYMSHDQG-YLRFFTYLSffntSMLGLVTSSNLIQVYIFWELVGMCSYLLIgfW 165
Cdd:PRK12668 63 GRVDKLSRVFGLIFGIMAFIGVIYA--LHVKDPGqHVAALLYVG----SALGAVFAGDLLTLFVFWELMAFTSTFLV--W 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 166 FTR-PIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFrDLFQIFNnliyknevnlffvTLCALLLFCGSVAKSAQF 244
Cdd:PRK12668 135 ARGtKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFGVNAAFP 200
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 245 PLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIppimsviALIGIITVVLGATLAIAQKDIKKNLAYSTM 324
Cdd:PRK12668 201 PLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELL-------IYIGAAMAVYGVFFALLENDLRRLLSYHIV 273
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 325 SQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGSIIHSmeaiVGYSpdksqNMVLMGGLTKHAPITKTSFLIG 401
Cdd:PRK12668 274 SQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYR----TGTE-----KLTELGGLYRSMPLTALFCLVG 344
|
410
....*....|....*.
gi 1678641912 402 TLSLCGIPPFACFWSK 417
Cdd:PRK12668 345 ALSISAFPLFSGFVSK 360
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-449 |
5.80e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 100.19 E-value: 5.80e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 89 IDSLTSIMSILITTVGILVLIYSdSYMSHDQ----GYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGF 164
Cdd:PRK12662 74 VDILSATMLVLVNFIAVMSVLYG-IYPNRKEisvnKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAM 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 165 WFTRPiAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNLiYKNEVnlffVTLCALLLFCGSVAKSAQF 244
Cdd:PRK12662 153 GRDKK-ALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDL-PTNRA----IQIGVLFIMVGLFIKAALF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 245 PLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLL------PLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKK 317
Cdd:PRK12662 227 PFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKR 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 318 NLAYSTMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFLGSGSIIHSMEaivgyspdkSQNMVLMGGLTKHAPIT 394
Cdd:PRK12662 306 IFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFG---------TTKLEDCLNLWKSMPKI 376
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1678641912 395 KTSFLIGTLSLCGIPPFACFWSKDEILN---DSWLYSPIFAIIACStaGLTAFYMFRI 449
Cdd:PRK12662 377 TLAFVLLSLSLIGMPPTSGFVAKWYILDafiKSNAWIGLVVLLVGS--GLSVIYVWKI 432
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
18-464 |
1.47e-21 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 99.00 E-value: 1.47e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 18 VPILIGVGLLLFPTATN-NIRRMWAF---PSILLLTIVMIFSIDLSIHQIENSSIYQYVwswtinNDLSLEFGYLIDSLt 93
Cdd:PRK06473 8 IPLLGAILIGFWPSGINgKLARSVALviaSVLLLLSLVLAFQFDPGNPNQQFTEFIPWI------DSLGLSYHLGVDGL- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 94 SIMSILITTVGILVLIYSDSYMSHDQGYlrFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWfTRPIAAN 173
Cdd:PRK06473 81 SLPLLVLNSLLTLIAIYSSDESIQRPRF--YYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 174 ACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNLIYKNEvnlfFVTLCALLLfcGSVAKSAQFPLHVWLPDA 253
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLSTQ----LLLLAPILV--GFGIKIPLVPFHTWLPDA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 254 -MEGPTPISALIhAATMVAAGIFLVAR-----LLPLFIVIPPIMSVIAligIITVVLGATLAIAQKDIKKNLAYSTMSQL 327
Cdd:PRK06473 232 hVEASTPVSVLL-AGVLLKLGTYGLLRfgvglFPEAWVYLAPWLATWA---VVSVLYGASCAIAQKDMKKMVAYSSIGHM 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 328 GYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGsiihsmeaiVGYSPDKSQNMVLMGGL---TKHAPITKTSFLIG 401
Cdd:PRK06473 308 GYILLAAAAAtplSILAAVFQMISHGLISALLFLLVG---------VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILG 378
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1678641912 402 TLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYLNVHFQN 464
Cdd:PRK06473 379 VMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSN 441
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
42-364 |
3.10e-20 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 94.95 E-value: 3.10e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 42 FPSILLLTIVMIFSIDLSihqienSSIYQYVWSWTINNDLSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGY 121
Cdd:MTH00063 2 VLLVSLLLCLLIFFLFLV------GVSSSVSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYAS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 122 LRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTrPIAANACQKAFVTNRVGDFGLLLgILGFYWITG 201
Cdd:MTH00063 76 FLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 202 SlefrdlfqifnnliyknevNLFFVTLCALLLFcgsVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlL 281
Cdd:MTH00063 154 S-------------------GSFLCCLFFFLIV---FTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-Y 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 282 PLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSG 361
Cdd:MTH00063 211 DYLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVG 290
|
...
gi 1678641912 362 SII 364
Cdd:MTH00063 291 DVM 293
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
16-451 |
5.95e-20 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 94.01 E-value: 5.95e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 16 LPVPILIGVGLLLFPTATNNIRRMWAFPS--ILLLTIVMIFSIDLSIHQIEnssiYQYVWSWtiNNDLSLEFGYLIDSLt 93
Cdd:PRK07363 8 LPILGAIIIGFFPGNLPSARLRQITLVFAvlVLAWSLFLLTQFDLSDPGMQ----FQEYLPW--NEPLGLSYSLGVDGL- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 94 SIMSILITTVGILVLIYSDSYMSHDQGYlrFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPiAAN 173
Cdd:PRK07363 81 SLPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-RGY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 174 ACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRdlfqiFNNLIYKN-EVNLFFVTLCALLLFCGsvAKSAQFPLHVWLPD 252
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFD-----YDAISTQNlSLNTQLILLTGLLLGFG--IKIPLVPLHTWLPD 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 253 AMEGPTPISALIHAATMVAAGIFLVARL-LPLFiviPPIMSVI----ALIGIITVVLGATLAIAQKDIKKNLAYSTMSQL 327
Cdd:PRK07363 231 AYTEASPAVAILLGGVLAKLGTYGLLRFgLQLF---PQTWSLVapglAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHM 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 328 GYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMVLMGGL---TKHAPITKTSFLIG 401
Cdd:PRK07363 308 GYILVAAAAGtqlSLLGAVAQMISHGLILALLFHLVGIV----ERKVG-----TRDLDVLNGLmnpIRGLPLTSALLVLA 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 1678641912 402 TLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYmFRIYL 451
Cdd:PRK07363 379 GMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVY-FVILL 427
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
84-446 |
9.81e-20 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 92.90 E-value: 9.81e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 84 EFGYLIDSLTSIMSILITTVG-ILVLIYSDSYMSH-------DQGYLRFFtYLSFfntSMLGLVT-----SSNLIQVYIF 150
Cdd:PRK08676 55 ESRYLFIDHLGIFVVLIASVVfILAALYARGYVDHllsngelDPENLKVF-YLGF---NLLLSVItfaffSDNLALFWIF 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 151 WELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLlGILGFYWIT------GSLEFRDLfqifnnLIYKNEVNLF 224
Cdd:PRK08676 131 AELTTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFI-GLIFLFSLTrqalgtGTLNWTEL------AAHASLLSPS 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 225 FVTLCALLLFCGSVAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLLPLFI---VIPPIMSVIALIGII 300
Cdd:PRK08676 204 VLGASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIF 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 301 TVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRA---ALFHLITHAYSKALLFLGSGsIIHSMeaivgYSPDK 377
Cdd:PRK08676 283 SIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ-----YRSDR 356
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1678641912 378 SQNmvlMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEILNDS-----WLYSPIFAIIACSTAGLTAFYM 446
Cdd:PRK08676 357 FDR---IFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLggisvWLVLAVLLLLLLAASSFAIFLL 427
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
190-454 |
2.93e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 91.95 E-value: 2.93e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 190 LLGILGFYWITGSLEFRDLFQIFNNLIYKNEVNLFFVTLCALLLfcgsvaKSAQFPLHVWLPDAM-EGPTPISAlIHAAT 268
Cdd:PRK12665 178 LIGIALVYAATGTLNMADLAVRLDELPSGTRTALFAVLLVAFGI------KAAVFPLSFWLPDSYpTAPAPVTA-VFAGL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 269 MVAAGIFLVARLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFH 345
Cdd:PRK12665 251 LTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYY 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 346 LITHAYSKALLFLGSGSIihsmEAIVGyspdkSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEIL---- 421
Cdd:PRK12665 331 VAHHITVQTTLFLVVGLI----ERQAG-----SSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeaga 401
|
250 260 270
....*....|....*....|....*....|....*.
gi 1678641912 422 -NDSWLyspIFAIIACS--TAGLTAFYMFRIYLLVF 454
Cdd:PRK12665 402 eDGTWL---AWALVAGGvvTSLLTLYAVARVWTKAF 434
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
45-454 |
1.64e-18 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 89.29 E-value: 1.64e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 45 ILLLTIVMIFSIDLSIHQIENS------------SIYQYVWSWTINNDLSLEFGYLIDSLTSIMSILITTVGILVLIYSD 112
Cdd:CHL00049 21 ILIFGLILLLMIDLTSDQKDIPwlyfisstslvmSITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 113 SYMSHDQGYLRFFtyLSFFNTSMLG---LVTSSNLIQVYIFWELVGMCSYLLIGFwFTRPIAANACQKAFvtnrvgdfgL 189
Cdd:CHL00049 101 EYIECTEMAITEF--LLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY-TKKDVRSNEATMKY---------L 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 190 LLG-----IL--GFYWITG-SLEFRDLFQIFNNLIYKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEG-PTPI 260
Cdd:CHL00049 169 LMGgasssILvyGFSWLYGlSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 261 SALIhAATMVAAGIFLVARLLPlfIVIPPIM----SVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGM 336
Cdd:CHL00049 249 VAFL-SVTSKVAASALATRIFD--IPFYFSSnewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIV 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 337 GSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGyspdkSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWS 416
Cdd:CHL00049 326 GDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFG 400
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1678641912 417 KDEILNDSW---LYSPIFaiIACSTAGLTAFYMFRIYLLVF 454
Cdd:CHL00049 401 KLYLFWCGWqagLYFLVS--IGLLTSVISIYYYLKIIKLLM 439
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
87-417 |
9.68e-17 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 83.54 E-value: 9.68e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 87 YLIDSLTSIMSILITTVGILVLIysdSYMSHDQGYlRFFTYLSFFNT-SMLGLVTSSNLIQVYIFWELVGMCSYLLIGFW 165
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLI---TGLGEKKSS-GLYVFLMLMGLaSVSAIVLADDIFNLYVFFEIAAIVQVGLVIAS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 166 FTRpiaaNACQKAFVTNRVGDFG---LLLGILGFYWITGSLEFRDLfqifNNLIYKNEVNLFFVTLCALLLFcGSVAKSA 242
Cdd:PRK06277 144 GTE----EAYKAALKYMILGNVAgsiLLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIYGGLLLLIF-GLLYGSG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 243 QFPLHVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLLPLFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKN 318
Cdd:PRK06277 215 LPPFHTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRL 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 319 LAYSTMSQLGYMMLALGMG---SYRAALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQNMVLMGGLTKHAPITK 395
Cdd:PRK06277 294 LAYHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAGIV---------SYRTKTSNLRKLGGLLPVMPVVA 364
|
330 340
....*....|....*....|..
gi 1678641912 396 TSFLIGTLSLCGIPPFACFWSK 417
Cdd:PRK06277 365 FMVLCAKLAISGVPPFNGFQSK 386
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
44-421 |
7.38e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 80.83 E-value: 7.38e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 44 SILLLTIVMIFSIDLSIHQIeNSSIYQYVWSWTINNDLSLEFGYLIdsltsIMSILITTVGILVLIYSDSYMSHDQGYLR 123
Cdd:MTH00199 25 STLKLSIGVLLLIGLIVELN-SLNLFQSDKVLDGTNGLLLTNSWII-----ISKIIIIIGSISILLMGSGETILSEGGQS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 124 FFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSL 203
Cdd:MTH00199 99 SPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGET 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 204 EFRDlfqifNNLIYKNEVNLFFVTLCalLLFCGSVAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFlvarllP 282
Cdd:MTH00199 179 SIQG-----INSILTGDVGKILITIS--LLFKLSAA-----PFHMWAPDVYEGaPTITTALL--ATVPKIGVF------S 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 283 LFIVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSY---RAALFHLITHayskALLFLG 359
Cdd:MTH00199 239 ILVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFesiQASLIYMIIY----VIMSIC 314
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1678641912 360 SGSIIHSMEAIVGYspdksqnMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEIL 421
Cdd:MTH00199 315 SFSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
124-456 |
1.80e-15 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 79.69 E-value: 1.80e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 124 FFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGI-LGFYWITGS 202
Cdd:PRK12561 89 FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLaLALSGDTFT 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 203 LEFRDLFQifnnliykNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFL----- 276
Cdd:PRK12561 169 FDLAELGA--------KSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggy 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 277 ------VARLLPLFIVIPPimsVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMlaLGMGSYRA-----ALFH 345
Cdd:PRK12561 234 alirfnVQMLPDAHVYFAP---ALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQ 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 346 LITHAYSKALLFLGSGsiihsmeaiVGYSPDKSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEI---LN 422
Cdd:PRK12561 309 MISHGLIAAALFFLTG---------VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgIT 379
|
330 340 350
....*....|....*....|....*....|....*...
gi 1678641912 423 DSWLYSPIFAIIACSTAG----LTAFYMFRIYLLVFEG 456
Cdd:PRK12561 380 SSDVYSSTFRTITILLAAvgliLTPIYLLSMLRRVFYG 417
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
134-436 |
1.74e-14 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 75.84 E-value: 1.74e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 134 SMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFN 213
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 214 NliyKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLvarllpLFIVIPPIMS 292
Cdd:MTH00196 85 S---GQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLNVN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 293 VIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSY---RAALFHLITHAYSKALLFLgsgsiihsmeA 369
Cdd:MTH00196 154 ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFesiQASLVYLFIYIIMSICVFS----------I 223
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1678641912 370 IVGYSPDKSQnMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIAC 436
Cdd:MTH00196 224 ILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLA 289
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
139-456 |
2.07e-14 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 76.79 E-value: 2.07e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 139 VTSSNLIQVYIFWELVGMCSYLLIGfwftrpiaanaCQKA----FVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNN 214
Cdd:PRK08042 107 VIASNLGMFVVMAEIMALCAVFLTG-----------NSKEgklwFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQ 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 215 LIYKNEVNLFFVTLCALLlfcgsvakSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVI 294
Cdd:PRK08042 176 LPLGSDIWLLGVIGFGLL--------AGIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVA 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 295 ALI-GIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMG--------------SYRAALFHLITHAYSKALLFLG 359
Cdd:PRK08042 248 LLVlGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLG 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 360 SGSIIHSmeaiVGYspdksQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEI------LNDSWLY-----S 428
Cdd:PRK08042 328 AGSVWFR----TGH-----RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFvarllG 398
|
330 340
....*....|....*....|....*...
gi 1678641912 429 PIFAIIACSTAGLTAFYMFRIYLLVFEG 456
Cdd:PRK08042 399 PLLAVGLAITGALAVMCMAKVYGVTFLG 426
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
66-417 |
1.02e-13 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 74.32 E-value: 1.02e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 66 SSIYQYVWSWTINNDLSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMshDQGYLRFFTYLSFFNTSMLG---LVTSS 142
Cdd:PRK02504 53 AALVALALQWDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYV--EQSGTPLGEFAAILLTATLGgmfLSGAT 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 143 NLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEfrDLFQIFNNLIykneVN 222
Cdd:PRK02504 131 ELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGST--QLSAIALALI----TS 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 223 LFFVTLCALLLFCGSVA-KSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLLPLfiVIPPIMS----VIAL 296
Cdd:PRK02504 205 PSLGLALALVFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRLLVT--AFPSFDEqwklLFTA 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 297 IGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITH------AYSKALLF-LGSGSiihs 366
Cdd:PRK02504 282 LAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAYlfmnlgAFACVILFsLRTGT---- 357
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1678641912 367 mEAIVGYSpdksqnmvlmgGLTKHAPITKTSFLIGTLSLCGIPPFACFWSK 417
Cdd:PRK02504 358 -DQISDYA-----------GLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
75-125 |
2.82e-13 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 64.76 E-value: 2.82e-13
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1678641912 75 WTINNDLSLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFF 125
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
95-447 |
3.80e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 69.18 E-value: 3.80e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 95 IMSILITTVGILVLIYSDSYMShdQGYLRFFTYLSFFNTSMLGLVtssNLIQVYIFWELVGMCSYLLIGFWFTRPIAANA 174
Cdd:MTH00226 109 ILTGFIVPCSILISWHSVKYLT--KSFLICMLILEFLLYAVFSVL---DIFMFYILFEGVLIPMYLILGIWGSREEKMQA 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 175 CQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIfNNLIYKNEVNLFFvtlcaLLLFCGSVAKSAQFPLHVWLPDA- 253
Cdd:MTH00226 184 AYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQKWIF-----LGIFLAMAVKIPIFPFHIWLPKAh 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 254 MEGPTPISALIHAATMVAAGIFLVARLLPLF-IVIPPIMSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMML 332
Cdd:MTH00226 258 VEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSI 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 333 AL---GMGSYRAALFHLITHAYSKALLFLgsgsiihsmEAIVGYSPDKSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIP 409
Cdd:MTH00226 338 TLvthDIIGLTGSIFIMLAHGIVSSLLFI---------LVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVP 408
|
330 340 350
....*....|....*....|....*....|....*...
gi 1678641912 410 PFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMF 447
Cdd:MTH00226 409 PSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSF 446
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
74-409 |
2.53e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 63.54 E-value: 2.53e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 74 SWTINNDLSLEFGYLIDSLTSI------MSILITTVGILVLIYSDSYMshdqgYLRFFTYLSFFNTSMLGLVTSSNLIQV 147
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVslffilLTTLLIPICILISWKSIKFL-----FKEFLLCLLFLEVLLIGVFSVLDLLLF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 148 YIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIfnnliyknevNLFFVT 227
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNI----------KLPLSI 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 228 LCALLL--FCGSVAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMS-VIALIGIITVV 303
Cdd:MTH00204 208 QKWLLVgfFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFApLIVMLSVIAVI 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 304 LGATLAIAQKDIKKNLAYSTMSQLGYMMLAL---GMGSYRAALFHLITHAYSKALLFLGSGSIihsmeaivgYSPDKSQN 380
Cdd:MTH00204 288 YGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFL---------YERHHTRL 358
|
330 340
....*....|....*....|....*....
gi 1678641912 381 MVLMGGLTKHAPITKTSFLIGTLSLCGIP 409
Cdd:MTH00204 359 IKYYRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
230-445 |
3.28e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 63.33 E-value: 3.28e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 230 ALLLFCGSVAKSAQFPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLLPLfiVIPPIMSVIALI--------GII 300
Cdd:PRK12666 213 AALLLVVFLIKAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTL--LFGPEAGASAGFgqdwllpgGLA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 301 TVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYR---AALFHLITHAYSKALLFL-----------GSGSIIHS 366
Cdd:PRK12666 289 TLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgaAADRLAVT 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 367 MEAivgYSPDKSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEILN---------DSWLY------SPIF 431
Cdd:PRK12666 369 PEL---YDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQallnppgagAAWWLwalvllSGLA 445
|
250
....*....|....
gi 1678641912 432 AIIACSTAGLTAFY 445
Cdd:PRK12666 446 ALIALTRAGIRLFW 459
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
148-459 |
9.30e-10 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 61.65 E-value: 9.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 148 YIFWELVGMCSYLLIGFW--FTRPIAANacqKAFVTNRVGDFGLLLGIL--GFYWITGSLEFRDLFQifnnliykNEVNL 223
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWggKKRQYAAT---KFILYTAGSSLFILLAALamAFYGDTPTFDMTALAA--------KDFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 224 FFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV----------ARLLP-LFIVIPPIMS 292
Cdd:PRK02546 210 GFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKmggyallrmnAGMLPdAHAQFAPLLI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 293 VIaliGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMlaLGMGSYRA-----ALFHLITHAYSKALLFLgsgsiihsm 367
Cdd:PRK02546 284 VL---GVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLFF--------- 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 368 eaIVGYSPDKSQNMVL--MGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEI---LNDSWLYSPIFAIIACSTAG-- 440
Cdd:PRK02546 350 --LVGATYDRTHTLMLdeMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVfvgFATSDAYTLPFRVVVVFLAAvg 427
|
330 340
....*....|....*....|.
gi 1678641912 441 --LTAFYMFRIYLLVFEGYLN 459
Cdd:PRK02546 428 viLTPIYLLSMLREIFFGPEN 448
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
240-449 |
2.28e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 60.64 E-value: 2.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 240 KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVArllpLFIVIPPIMSVialiGIITVVLGATLAIAQKDIKKN 318
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTS----LVITSKLLLSV----AIISLVVGAFGALNQTRIKRL 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 319 LAYSTMSQLGYMMLALGMGSYRaALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNMVLMGG------------ 386
Cdd:MTH00198 384 LAYSGIGHIGFILIGVSAGTYE-SLQASWTYAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNynlvrrlvdlti 462
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1678641912 387 LTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEILNDS----WLYS-PIF---AIIACSTAGLTAFYMFRI 449
Cdd:MTH00198 463 LSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSikiaFSSSlSIYylvALFAIICTCISAFYYIRI 533
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
94-363 |
3.87e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 59.80 E-value: 3.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 94 SIMSILITTVGILVLIYSDSYmSHDQGYLRfftylSFFNTSMLGLV---TSSNLIQVYIFWELVGMCSYLLIGfwftrpI 170
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWLS-----SLYILTILGMAivlTSDNYLLFLAGWEIMTIPSYVAIA------L 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 171 AANACQKAFVTNRVGDFGLLLGILGFYW---ITGSLEFRDLfqifnnliyKNEVNLFFVTLcalllfcGSVAKSAQFPLH 247
Cdd:PRK06459 115 TKKNKRPAFVFMAFGELSTVLILAGFAWafiISGTTNFSYL---------PSPVPLILASF-------GFIIKMGMMPFL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 248 V--WLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPP--IMSVIALIGIITVVLGATLAIAQKDIKKNLAYST 323
Cdd:PRK06459 179 VseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIgyFGLTILAIGAFSILFGALYAYVSENVKGLLAFST 258
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1678641912 324 MSQLGYMMLALGM--------GSYR-----AALFHLITHAYSKALLFLGSGSI 363
Cdd:PRK06459 259 IENNGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGLQ 311
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
45-357 |
4.36e-08 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 56.29 E-value: 4.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 45 ILLLTIVMIFSIDLSIHQIENSSIYQYVWSWTINNDLSLEFGYL-IDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLR 123
Cdd:MTH00014 12 LLLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLsSDMLSAPLITLTLWITALMILASFKIFQNNKAPKT 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 124 FFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSL 203
Cdd:MTH00014 92 FMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 204 EFRDLFQIFNnliyknevNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------ 276
Cdd:MTH00014 172 SMLMSSMEPP--------SIYLMNLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggyg 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 277 VARLLPLFIVI-----PPIMSVIALIGIITvvlgATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLIT 348
Cdd:MTH00014 237 LLRMSSLFMHInkslsAPFSSISLVGAVIT----SLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTswgWQGALAMMIA 312
|
....*....
gi 1678641912 349 HAYSKALLF 357
Cdd:MTH00014 313 HGLCSSALF 321
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
20-466 |
5.59e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 55.72 E-value: 5.59e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 20 ILIGVGLLLFPTATNNIRRMWAFPSILLLTIVMIFSIDLSIHQIENSSIYQyvwswtinndlsleFGYLIDSLTSIMSIL 99
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSN--------------LYLSYDPLSSPLVIL 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 100 ITTVGILVLIYSDSYMsHDQGYLRFFTYLSFFNTSMLGLV---TSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQ 176
Cdd:MTH00206 68 SCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGY 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 177 KAFVTNRVGDFGLLLGILGFYWITGSLefrdLFQIFNNLIYKNEVNLFFVTLCALLLFCgsvaKSAQFPLHVWLPDA-ME 255
Cdd:MTH00206 147 YFLFYTLIGSLPLLIALLFLQNSLGSL----SLYILYFSKLTTWNNNLWWLACILAFLV----KLPLYGVHLWLPKAhVE 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 256 GPTpisalihAATMVAAGIFLVA---RLLPLFIVIPPIMSVIALIGIITVVLGATLA----IAQKDIKKNLAYSTMSQLG 328
Cdd:MTH00206 219 APV-------AGSMVLAGVLLKLggyGMMRIILILGPSTKLSSYFFIILGLWGSIMTssicLRQTDLKSLIAYSSVSHMS 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 329 YMMLALGMG---SYRAALFHLITHAY-SKALLFLGSgsiihsmeaiVGYSPDKSQNMVLMGGLTKHAPITKTSFLIGTLS 404
Cdd:MTH00206 292 LVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLFFLA 361
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1678641912 405 LCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYLNVHFQNFN 466
Cdd:MTH00206 362 NLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLS 423
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
222-466 |
5.70e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 55.28 E-value: 5.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 222 NLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfiviPPIMSVIALIGIIT 301
Cdd:MTH00144 79 NLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDL----YWLAYLLCVISVLS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 302 VVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNM 381
Cdd:MTH00144 155 ALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGL 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 382 VLMGGLtkhapitktsfligtLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTA--FYMFRIYLLVFEGYLN 459
Cdd:MTH00144 235 SIISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISlfFYLSVFFSSFLSSSKS 299
|
....*..
gi 1678641912 460 VHFQNFN 466
Cdd:MTH00144 300 KKSNSSK 306
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
139-449 |
1.81e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 53.82 E-value: 1.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 139 VTSSNLIQVYIFWELVGMCSYLLIGFWFTrPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLefrDLFQIFNNLIyk 218
Cdd:MTH00200 21 FSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQW---GISEMLGPLS-- 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 219 nevnlFFVTLCALLLfcgsvaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfivipPIMSVIALIG 298
Cdd:MTH00200 95 -----ETLILLALAL------KLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPA-----LNSNILLLLG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 299 IITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLgsgsiihsmeaivgYSPDKS 378
Cdd:MTH00200 159 LLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL--------------LNLLNS 224
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1678641912 379 QNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEILNDSWLYS-PIFAIIACSTAGLTAFYMFRI 449
Cdd:MTH00200 225 TKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGlFIYATILLLGSLLSLFFYLRL 296
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
245-423 |
3.24e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 52.90 E-value: 3.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 245 PLHVWLPDAMEGPTPISALIHAATMVAAGI---FLVARLLPlfiviPPIMSviaLIGIITVVLGATLAIAQKDIKKNLAY 321
Cdd:MTH00112 110 PFHFWLPEVLQGSTTTTALILSTWQKLAPLtllLMTSNSLN-----PTLLL---TLAILSTLIGGWGGLNQTQLRKIMAF 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 322 STMSQLGYMMLALGMgSYRAALFHLITHAYSKALLFLgsgsIIHSMEAIvgyspdKSQNMVLMggLTKhAPITKTSFLIG 401
Cdd:MTH00112 182 SSIAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTSTK------TLKDMMTS--WTK-SPTLNTTLMLT 247
|
170 180
....*....|....*....|..
gi 1678641912 402 TLSLCGIPPFACFWSKDEILND 423
Cdd:MTH00112 248 LLSLAGLPPLTGFMPKWLILQE 269
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
122-466 |
6.09e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 52.65 E-value: 6.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 122 LRFFTYLSFFNTSMlglvtssnlIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITG 201
Cdd:MTH00127 103 LQIFLILAFGATEI---------IMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 202 SLEFRDLfQIFNNLIYKNEVNLFFVTLCaLLLFcgsVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLL 281
Cdd:MTH00127 174 TLSMLTL-QYSQPLQLSSWADKLWWAGC-LLAF---LVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMM 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 282 PLFIVIPPIMS----VIALIGIItvvLGATLAIAQKDIKKNLAYSTMSQLGYM---MLALGMGSYRAALFHLITHAYSKA 354
Cdd:MTH00127 249 VMLDPLTKELSypfiILALWGII---MTGSICLRQTDLKSLIAYSSVSHMGLVaggILIQTPWGFTGALILMIAHGLTSS 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 355 LLFLgsgsiihsmEAIVGYSPDKSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAII 434
Cdd:MTH00127 326 ALFC---------LANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLAL 396
|
330 340 350
....*....|....*....|....*....|..
gi 1678641912 435 ACSTAGLTAFYMFRIYLLVFEGYLNVHFQNFN 466
Cdd:MTH00127 397 TGLGTLITAGYSLYMFLMTQRGPLPDHIIALN 428
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
20-461 |
8.90e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 52.23 E-value: 8.90e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 20 ILIGVGLLLFPTATNNIRRMWAFPSILLLtIVMIFSIDLSIHQIENSsiyqyvwswTINNDLslefgYLIDSLTSIMSIL 99
Cdd:MTH00068 4 IIIPTLMLLPTTWLSPKKWLWTLTTTNSL-IIAFLSLMWFNLPSETM---------NFTNKY-----FGIDQISSPLLIL 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 100 ITTVGILVLIYSDSYMS-----HDQGYLRFFTYLsffNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANA 174
Cdd:MTH00068 69 TCWLLPLMILASQNHLKnepinRQRTYISMLIIL---QLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNA 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 175 CQK-AFVTnRVGDFGLLLGILGFYWITGSLEFrDLFQIFNNLIYKNEVNLFFVTLCaLLLFcgsVAKSAQFPLHVWLPDA 253
Cdd:MTH00068 146 GTYfLFYT-LAGSLPLLIALLILQNSLGSLSL-ILLELMSPMQLMTYTNKIWWLAC-LLAF---MVKMPLYGLHLWLPKA 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 254 -MEGPTpisalihAATMVAAGIFL------VARLLPLFiviPPIMS-------VIALIGIItvvLGATLAIAQKDIKKNL 319
Cdd:MTH00068 220 hVEAPI-------AGSMILAAVLLklggygILRISILL---TPLSKelsypfiILALWGVL---MTSLICLRQTDLKSLI 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 320 AYSTMSQLGYMMLALGMG---SYRAALFHLITHAY-SKALLFLgsgsiihsmeAIVGYSPDKSQNMVLMGGLTKHAPITK 395
Cdd:MTH00068 287 AYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCL----------ANTNYERTHSRTLLLLRGAQTILPLMA 356
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1678641912 396 TSFLIGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMFRIYLLVFEGYLNVH 461
Cdd:MTH00068 357 TWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNH 422
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-332 |
1.44e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 51.32 E-value: 1.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 87 YLIDSLTSIMSILITTVGILVLIYSD--------SYMSHDQGYLrFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCS 158
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHkitnqtilKYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 159 YLLIGFWfTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFnnliyKNEVNLFFVTLCALLLFCGSV 238
Cdd:PRK06591 152 YVLIASG-NNPKSLIGAFDYLIMGSIGATLILIAIGFLLSITGSLNMTDIAAYL-----QEHTNSRIITIAIGFFLIGAI 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 239 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPPIMSVIA----LIGIITVVLGATLAIAQKD 314
Cdd:PRK06591 226 LKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYETIKTAITnfirPIALATLIIAPYFAYQAKN 305
|
250
....*....|....*...
gi 1678641912 315 IKKNLAYSTMSQLGYMML 332
Cdd:PRK06591 306 FKNIIIYSCFTQIGYVFL 323
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
95-359 |
5.09e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 49.67 E-value: 5.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 95 IMSILITTVGILVLIYSDSYMSHDqgylrFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANA 174
Cdd:MTH00217 87 ILTALLTPICILISWNSIKFLIKE-----FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 175 CQKAFVTNRVGDFGLLLGILGFYWITGSLEfrdlFQIFNNLIYKNEVNLFFVtlcaLLLFCGSVAKSAQFPLHVWLPDA- 253
Cdd:MTH00217 162 SYYFFFYTFIGSVFMLLGIFTLYSYAGTTD----YQALCCLKIEKELQYFIF----LGFFLSLAIKIPKIPFHIWLPQAh 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 254 MEGPTPISALIHAATMVAAGIFLVARLLPLFivipPIMS-----VIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLG 328
Cdd:MTH00217 234 VEAPVAGSVILAGVLLKLGGYGFIRFSWPLL----PEASeyfspLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMG 309
|
250 260 270
....*....|....*....|....*....|....
gi 1678641912 329 YMMLAL---GMGSYRAALFHLITHAYSKALLFLG 359
Cdd:MTH00217 310 LVTLGIfshTIQGLVAAIFLMLAHGLVSSALFIA 343
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
14-466 |
5.14e-06 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 49.56 E-value: 5.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 14 IPLPVPILIGVGLLLFPTATNNIRRmWAFPSILLLTIVMIFSIDLSIHQIENSSIyQYV--WSWTINNDLSLEFGylIDS 91
Cdd:CHL00011 9 IIVVLPIFAGSLIFFLPHRGNKVIR-WYTLCICLLELLLTTYAFCYHFQLDDPLI-QLKedYKWINFFDFHWRLG--IDG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 92 LtSIMSIL----ITTVGILVL--IYSDSYMSHdqgylrfFTYLSFFnTSMLGLVTSSNLIQVYIFWELVGMCSYLLIGFW 165
Cdd:CHL00011 85 L-SIGPILltgfITTLATLAAwpVTRNSRLFY-------FLMLAMY-SGQIGLFSSRDLLLFFIMWELELIPVYLLLSMW 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 166 --FTRPIAANacqKAFVTNRVGDFGLLLGIL--GFYwitGSLEFRDLFQIFNNLIYKnevnlffVTLCALLLFCGSVA-- 239
Cdd:CHL00011 156 ggKKRLYSAT---KFILYTAGGSIFLLIGVLgmGLY---GSNEPTLNFETLANQSYP-------VALEILFYIGFLIAya 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 240 -KSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVA----------RLLP--LFIVIPPIMsviaLIGIITVVLG 305
Cdd:CHL00011 223 vKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMgayglirinmELLPhaHSIFSPWLV----IVGAIQIIYA 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 306 ATLAIAQKDIKKNLAYSTMSQLGYMMlaLGMGSY-----RAALFHLITHAYSKALLFLgsgsiihsmeaIVGYSPDKSQN 380
Cdd:CHL00011 292 ASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGFIGAALFF-----------LAGTSYDRIRL 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 381 MVL--MGGLTKHAP---ITKTSFLIGTLSLCGIPPFAC----FWSkdeiLNDSWLYSPIFAIIACSTAG----LTAFYMF 447
Cdd:CHL00011 359 VYLdeMGGIAIPMPkifTMFSSFSMASLALPGMSGFVAelivFFG----IITSQKYLLMPKILITFVMAigmiLTPIYLL 434
|
490
....*....|....*....
gi 1678641912 448 RIYLLVFEGYLNVHFQNFN 466
Cdd:CHL00011 435 SMLRQMFYGYKLFNVPNSY 453
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
222-478 |
1.39e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 47.74 E-value: 1.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 222 NLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIppimsviALIGIIT 301
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMGL-------LICSVLS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 302 VVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGSIIHSMEAIVGYSPDKSQNM 381
Cdd:MTH00197 147 SLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 382 VLmggltkhapitktsFLIGTLSLCGIPPFACFWSKDEILNdSWLYSPIFAIIACSTAGlTAFYMFRIYLLVFEGYLNVH 461
Cdd:MTH00197 227 VF--------------LGLSFLSLGGLPPLSGFFLKWLILT-SLLSSNISLITFMLILS-TCFSLYYYLSLAYKSLILSN 290
|
250
....*....|....*..
gi 1678641912 462 FQNFNGKKNSSFYSISL 478
Cdd:MTH00197 291 WMINFLMKINLLYSGLF 307
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
69-475 |
1.93e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 47.53 E-value: 1.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 69 YQYVWSWTINNDLslefgYLIDSLTSIM---SILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFntsmlgLVT---SS 142
Cdd:MTH00150 7 YSSFSSYESLSEL-----FSVDSMSSLLislSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLI------LVLafsVS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 143 NLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFrdlfqIFNNLIYKNEVN 222
Cdd:MTH00150 76 SLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM-----LLISSLRKLLSS 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 223 LFFVTLCALLLFcgsVAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLLPLFIVIPPIMSVIA 295
Cdd:MTH00150 151 MGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSSSSFSIFL 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 296 L-IGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS---YRAALFHLITHAYSKALLFlgsgsiihsmeAIV 371
Cdd:MTH00150 221 IsLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFCSSGLF-----------CLA 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 372 GYSPDKSQ--NMVLMGGLTKHAPItkTSFLIGTLSLC--GIPPFACFWSKDEILNDSWLYSPIFAIIACSTAGLTAFYMF 447
Cdd:MTH00150 290 NYTYEKVHsrSLFLSKGMLMLYPS--LSLWWFLFCIInmAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSL 367
|
410 420
....*....|....*....|....*...
gi 1678641912 448 RIYLLVFEGYLNVHFQNFNGKKNSSFYS 475
Cdd:MTH00150 368 YLYTSIQHGGSSSFLKPFNELKSSEMLL 395
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
221-434 |
2.70e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 44.34 E-value: 2.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 221 VNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDAMEgptpiSALIHAATMVAAGIFLVARLLPLFIVipPIMSVIALIGII 300
Cdd:PRK12664 138 QNGQYTGYCKLLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLLFF--SGEEILLFLGII 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 301 TVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGS-----YRAALFHLITHAYSKALLFLGSGSIIHSMEAIvgysp 375
Cdd:PRK12664 211 TAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGssgvaIGILILQIVLSVVYQTLLFMVADSVINRTRKF----- 285
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1678641912 376 dksqNMVLMGGLTKhAPITKTSFLIGTLSLCGIPPFACFWSKDEILNDSWLYSPIFAII 434
Cdd:PRK12664 286 ----NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
230-466 |
3.73e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 43.23 E-value: 3.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 230 ALLLFCGSVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLfivipPIMSVIALIGIITVVLGATLA 309
Cdd:MTH00011 91 ALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSH-----NILPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 310 IAQKDIKKNLAYSTMSQLGYMMLAlgmgsyraalfhlITHAYSKALLFLGSGSIIHS-MEAIVGYSPDKSQNMvlMGGLT 388
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMI-------------SVFSPSMAILYFMTYIIITTpLMLLFAYLNAFSTKF--NSKIS 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 389 KHAPITKTSFLIGTLSLCGIPPFACF---WSKDEILNDSWLYSPIFAIIACSTAGLtaFYMFRIYLLVFegYLNVHFQNF 465
Cdd:MTH00011 231 SMSQTTSMSLFIMLLSLGGLPPFTGFmpkLMAIETLTSNSMILILLVLIVGSLMNL--FYYLNLIFNFM--YLSPTFSSL 306
|
.
gi 1678641912 466 N 466
Cdd:MTH00011 307 K 307
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
82-339 |
3.89e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 43.43 E-value: 3.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 82 SLEFGYLIDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLRFFTYLSFFNTSMLGLVTSSNLIQVYIFWELVGMCSYLL 161
Cdd:MTH00205 48 FISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLIL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 162 IGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFRDLFQIFNNLIYknevnLFFVTLCALLLFcgsVAKS 241
Cdd:MTH00205 128 ILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFY-----LFLYWIFLMLAF---LVKL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 242 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARL-LPLFIVIPPIMSVIALIGIITVVLGATLAIAQK 313
Cdd:MTH00205 200 PMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRItSMLYKLNSNFSELFFSISLWGGVMTGMICLRQV 272
|
250 260
....*....|....*....|....*.
gi 1678641912 314 DIKKNLAYSTMSQLGYMMLALGMGSY 339
Cdd:MTH00205 273 DLKSLIAYSSVGHMGLMVVGVFSNTS 298
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
189-433 |
2.84e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 40.68 E-value: 2.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 189 LLLGILGFYWITGSLEFrdlfqifnnLIYKNEVNLFFVTLcALLLfcgsvaKSAQFPLHVWLPDAMEGPTPISALIhaat 268
Cdd:MTH00041 70 LLNGALIQAWLSGSWSI---------NGPLNTLSSIIITL-ALAL------KLGLAPCHFWFPDVLQGLPFLQGLI---- 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 269 mvaagIFLVARLLPLFIVIPPI----MSVIALIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALF 344
Cdd:MTH00041 130 -----IATWQKIAPLILLISISnllnSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIM 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 345 HLITHAYSKALLFLGSGSIIHSMEAIvgyspdksqnmvlmGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSK-----DE 419
Cdd:MTH00041 205 FLIYIIINTSIFLIGNNFSLSTLSHL--------------NKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCL 270
|
250
....*....|....
gi 1678641912 420 ILNDSWLYSPIFAI 433
Cdd:MTH00041 271 IQNNSILISIILII 284
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
208-479 |
4.84e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 39.81 E-value: 4.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 208 LFQIFNNLIYKNEVNLFFVTLCALLLFcgsvAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVI 287
Cdd:MTH00160 72 LFSIILNMLNLMLFNNISSMLINSSLL----LKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINNNFII 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 288 ppimsviaLIGIITVVLGATLAIAQKDIKKNLAYSTMSQLGYMMLALGMGSYRAALFHLIthaYSKALLFLgsgsiihsm 367
Cdd:MTH00160 148 --------IIIILSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLI---YSIISLSI--------- 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 368 eaIVGYSPDKSQNMVLMGGLTKHAPITKTSFLIGTLSLCGIPPFACFWSKDEILN---DSWLYSPIFAIIACSTagLTAF 444
Cdd:MTH00160 208 --ILLFNKFNIFFLNQLFNSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQlliSNNMFFLLFILIMSSL--ITLY 283
|
250 260 270
....*....|....*....|....*....|....*
gi 1678641912 445 YMFRIYLLVFEGYLNVHFQNFNGKKNSSFYSISLW 479
Cdd:MTH00160 284 FYLRISYSSLMLNYNKNKWNLKKKKNKFSLILNFL 318
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
63-330 |
8.03e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 39.57 E-value: 8.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 63 IENSSIYQYVWSWTINNDLSLEFGYL-----IDSLTSIMSILITTVGILVLIYSDSYMSHDQGYLR--FFTYLSFFNTSM 135
Cdd:MTH00044 28 ISQSSLISLLSLFLLNNHWSSSWHNLslslaTDSLSSPLIILSCWLAPLSLLASINHLSNNSPNNQrtFISLIIIILTAL 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 136 LGLVTSSNLIQVYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSLEFrdlfqIFNNL 215
Cdd:MTH00044 108 IITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSI-----PLSEL 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1678641912 216 IYKNEVNLFFVTLCALLLFCGSVAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIFLVARLLPLFIVipPIMSVI 294
Cdd:MTH00044 183 NWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-MILAAILLKLGGYGLIRLINLFSL--PSANNI 259
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1678641912 295 ALIGIITVVLGATLA----IAQKDIKKNLAYSTMSQLGYM 330
Cdd:MTH00044 260 SFILIVFCCWGALITsiicLRQTDLKALIAYSSVGHMSLV 299
|
|
| |
