|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 700.03 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 1 MLKIIIPTIMLLPLTALSPCKHLWTNITTHSLLIAAISLQWLTPTYYPNKTSTPWASVDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 81 QNHLEREPTARKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITRWGNQPERLTAGIYLLFYTLVSSLPL 160
Cdd:MTH00124 81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 161 LIIILHLHNQIGTLYLPILKLTQPATSNSWTSLASSLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00124 161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 241 YGIIRVTILVNPSSSGLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHG 320
Cdd:MTH00124 241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTINLMAELTIMVALFNWSSLTIILTGTAI 400
Cdd:MTH00124 321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 558603519 401 ILTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMILLILKPELISGI 457
Cdd:MTH00124 401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 583.03 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 1 MLKIIIPTIMLLPLTALSPCKHLWTNITTHSLLIAAISLQWLTPTYYPNKTSTPWASVDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 81 QNHLEREPTARKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITRWGNQPERLTAGIYLLFYTLVSSLPL 160
Cdd:MTH00068 81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 161 LIIILHLHNQIGTLYLPILKLTQPATSNSWTSLASSLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00068 161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 241 YGIIRVTILVNPSSSGLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHG 320
Cdd:MTH00068 241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTINLMAELTIMVALFNWSSLTIILTGTAI 400
Cdd:MTH00068 321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 558603519 401 ILTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMILLILKPELISGI 457
Cdd:MTH00068 401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGM 457
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-457 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 567.21 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 1 MLKIIIPTIMLLPLTALSPCKHLWTNITTHSLLIAAISLQWLTPTYYPNKTSTPWASVDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 81 QNHLEREPTARKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITRWGNQPERLTAGIYLLFYTLVSSLPL 160
Cdd:MTH00110 81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 161 LIIILHLHNQIGTLYLPILKLTQPATSNSWTSLASSLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00110 161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 241 YGIIRVTILVNPSSSGLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHG 320
Cdd:MTH00110 241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTINLMAELTIMVALFNWSSLTIILTGTAI 400
Cdd:MTH00110 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 558603519 401 ILTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMILLILKPELISGI 457
Cdd:MTH00110 401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGP 457
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
2.98e-169 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 483.69 E-value: 2.98e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 1 MLKIIIPTIMLLPLTALSPCKHLWTNITTHSLLIAAISLQWLT-PTYYPNKTSTPWASVDQISSPLLVLSCWLLPLMIMA 79
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKnLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 80 SQNHLEREPTARKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITRWGNQPERLTAGIYLLFYTLVSSLP 159
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 160 LLIIILHLHNQIGTLYLPILKLTQPATSNSWTSLASSLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLG 239
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 240 GYGIIRVTILVNPSSSGLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAH 319
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 320 GLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTINLMAELTIMVALFNWSSLTIILTGTA 399
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 558603519 400 IILTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMILLILKPELISG 456
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-454 |
2.20e-158 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 455.94 E-value: 2.20e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 3 KIIIPTIMLLPLTALSPCKHLWTNITTHSLLIAAISLQWL-TPTYYPNKTSTPWASVDQISSPLLVLSCWLLPLMIMASQ 81
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFkWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 82 NHLEREPTARKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITRWGNQPERLTAGIYLLFYTLVSSLPLL 161
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 162 IIILHLHNQIGTLYLPILKLTQPATSNSWTSLASSLALllaFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGY 241
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLTTWNNNLWWLACILA---FLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 242 GIIRVTILVNPSSSGLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGL 321
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 322 TSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTINLMAELTIMVALFNWSSLTIILTGTAII 401
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 558603519 402 LTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMILLILKPELI 454
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
3.00e-137 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 402.43 E-value: 3.00e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 1 MLKIIIPTIMLLPLTALSPCKHLWTNITTHSLLIAAISLqwltpTYYPNKTSTPWASV------DQISSPLLVLSCWLLP 74
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSL-----FLLNNHWSSSWHNLslslatDSLSSPLIILSCWLAP 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 75 LMIMASQNHLEREPTARKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITRWGNQPERLTAGIYLLFYTL 154
Cdd:MTH00044 76 LSLLASINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 155 VSSLPLLIIILHLHNQIGTLYLPILKLTQPATSNSWTSLASSLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAAL 234
Cdd:MTH00044 156 FGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAI 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 235 LLKLGGYGIIR-VTILVNPSSSGLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAM 313
Cdd:MTH00044 236 LLKLGGYGLIRlINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGAL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 314 ILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTINLMAELTIMVALFNWSSLTI 393
Cdd:MTH00044 316 ILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSF 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 558603519 394 ILTGTAIILTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMILLILKPELIS 455
Cdd:MTH00044 396 PIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
5.14e-115 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 344.83 E-value: 5.14e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 1 MLKIIIPTIMLLPLtalSPCKHLWTNITTHSLLIAAISLQWLTPTYYPNKTSTpWASVDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00163 1 MLKFLFMLLFLIPL---CFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISY-FFGLDLLSFGLILLSFWICMLMILSS 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 81 QNHLEREptARKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITRWGNQPERLTAGIYLLFYTLVSSLPL 160
Cdd:MTH00163 77 ESVYKKN--NYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 161 LIIILHLHNQIGTLYLPILKLtqpatsNSWTSLASSLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00163 155 LVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 241 YGIIRVTILVNPSSSGLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHG 320
Cdd:MTH00163 229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTINLMAELTIMVALFNWSSLTIILTGTAI 400
Cdd:MTH00163 309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 558603519 401 ILTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMILLILKPELI 454
Cdd:MTH00163 389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLF 442
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
55-457 |
9.15e-105 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 317.55 E-value: 9.15e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 55 WASVDQISSPLLVLSCWLLPLMIMASQNhlEREPTARKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILIT 134
Cdd:MTH00150 19 LFSVDSMSSLLISLSLWISGLMMLASQK--SVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLIL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 135 RWGNQPERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTLYLPILKLTQPATSNSWtslASSLALLLAFMVKAPLYGLHL 214
Cdd:MTH00150 97 GWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLAFLVKLPMYPFHL 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSVSHM 294
Cdd:MTH00150 174 WLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHM 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 295 GLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTIN 374
Cdd:MTH00150 254 SLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLN 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 375 LMAELTIMVALFNWSSLTIILTGTAIILTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMILLILKPELI 454
Cdd:MTH00150 334 LLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLL 413
|
...
gi 558603519 455 SGI 457
Cdd:MTH00150 414 FMW 416
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
2.18e-104 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 318.22 E-value: 2.18e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 1 MLKIIIPTIMLLPLTALSPcKHLWTNITTHSLLIAAISLQWLTPTYYPNKTSTPWASVDQISSPLLVLSCWLLPLMIMAS 80
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKY-PWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 81 QNHLEREPTARkrIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITRWGNQPERLTAGIYLLFYTLVSSLPL 160
Cdd:MTH00014 80 FKIFQNNKAPK--TFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 161 LIIILHLHNQIGTLYLPILKLTQPATsnsWTSLASSLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGG 240
Cdd:MTH00014 158 LMSILLIFYTNNSLSMLMSSMEPPSI---YLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 241 YGIIRVTILVNPSSSGLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHG 320
Cdd:MTH00014 235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 321 LTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTINLMAELTIMVALFNWSSLTIILTGTAI 400
Cdd:MTH00014 315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 558603519 401 ILTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMILLILKPELIS 455
Cdd:MTH00014 395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLIT 449
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
57-454 |
4.21e-101 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 309.60 E-value: 4.21e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 57 SVDQISSPLLVLSCWLLPLMIMASQNHLEREptARKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITRW 136
Cdd:MTH00205 54 SFDSLSLPLIMLSFWISLLMVLASYKVFKSN--KNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGW 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 137 GNQPERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTLYLPILkltQPATSNSWTSLASSLALLLAFMVKAPLYGLHLWL 216
Cdd:MTH00205 132 GYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFN---FPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 217 PKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSVSHMGL 296
Cdd:MTH00205 209 PKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 297 VVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTINLM 376
Cdd:MTH00205 289 MVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLA 368
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 558603519 377 AELTIMVALFNWSSLTIILTGTAIILTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMILLILKPELI 454
Cdd:MTH00205 369 SEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIF 446
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
112-398 |
4.09e-72 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 229.51 E-value: 4.09e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 112 ASELMLFYITFEATLIPTLILITRWGNQPERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTLYLPILKLTQPATSNSWT 191
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 192 SLASSLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGLHYPFITLALWGALM 271
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 272 TSAICLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLA-NTNYERTHSRILLLTRGLQP 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 558603519 351 LLPLMATWWLLANLTNMALPPTINLMAELTIMVALFNWSSLTIILTGT 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
58-457 |
6.44e-65 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 216.87 E-value: 6.44e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 58 VDQISSPLLVLSCWLLPLMIMASQNHLEReptaRKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITRWG 137
Cdd:COG1008 80 VDGISLPLVLLTALLTPLAILASWNEIKK----RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWG 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 138 NqPERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTL---YLPILKLTQPATSNSWtslaSSLALLLAFMVKAPLYGLHL 214
Cdd:COG1008 156 G-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdIAELAAAPLPLTAQLL----LFLAFFIAFAVKVPMFPFHT 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPS-SSGLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSVSH 293
Cdd:COG1008 231 WLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 294 MGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTI 373
Cdd:COG1008 311 MGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTS 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 374 NLMAELTIMVALFNWSSLTIILTGTAIILTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMILLILKPEL 453
Cdd:COG1008 391 GFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQP 470
|
....
gi 558603519 454 ISGI 457
Cdd:COG1008 471 LLDL 474
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
58-449 |
8.15e-60 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 203.51 E-value: 8.15e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 58 VDQISSPLLVLSCWLLPLMIMASQNHLEReptaRKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITRWG 137
Cdd:PRK05846 80 VDGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 138 nQPERLTAGIYLLFYTLVSSLPL----LIIILHLHNQIGTL-YLPILKLTQPATSNSWtslaSSLALLLAFMVKAPLYGL 212
Cdd:PRK05846 156 -GKNRIYAATKFFLYTLLGSLLMlvaiIYLVVVYYNATGTFdIADLLNLPLPPGVQYW----LFLAFFIAFAVKMPMFPL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 213 HLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGLHYPF-ITLALWGALMTSAICLRQTDLKSLIAYSSV 291
Cdd:PRK05846 231 HTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIiITLGVIAIIYGALVALAQTDIKKLIAYSSI 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 292 SHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPP 371
Cdd:PRK05846 311 SHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPG 390
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 558603519 372 TINLMAELTIMVALFNWSSLTIILTGTAIILTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMAlhmiPMILLIL 449
Cdd:PRK05846 391 TSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILL----PLVALLL 464
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
57-454 |
3.21e-58 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 199.01 E-value: 3.21e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 57 SVDQISSPLLVLSCWLLPLMIMASQNHLEReptaRKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITRW 136
Cdd:TIGR01972 74 GVDGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 137 GNqPERLTAGIYLLFYTLVSSLPLLIIILHLHNQIG--TLYLPILKLTQPATSNSWtslaSSLALLLAFMVKAPLYGLHL 214
Cdd:TIGR01972 150 GG-PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGgtFDLLELLNLPLPFGVQTW----LFLAFFIAFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 215 WLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGLHYPFI-TLALWGALMTSAICLRQTDLKSLIAYSSVSH 293
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLaALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 294 MGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTI 373
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 374 NLMAELTIMVALFNWSSLTIILTGTAIILTASYTLYMLMMTQRGTLP-SHITSIQNSSTREHLLMALHMIPMILLILKPE 452
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSnPEVAEFPDLNGREIAVLAPLVVLILFLGLYPN 464
|
..
gi 558603519 453 LI 454
Cdd:TIGR01972 465 PL 466
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
22-454 |
6.28e-58 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 198.36 E-value: 6.28e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 22 HLWTNITTHSLLIAAISLQWlTPTYYpnktstpwaSVDQISSPLLVLSCWLLPLMIMASQN---HLEREptarkriFAST 98
Cdd:MTH00204 55 QFQFINLIEWIISPTLNFQW-GPLVF---------AVDGVSLFFILLTTLLIPICILISWKsikFLFKE-------FLLC 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 99 ILLAQLFLLLAFSASELMLFYITFEATLIPTLILITRWGNQPERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTL-YLP 177
Cdd:MTH00204 118 LLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTdYQI 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 178 ILKLTQPATSNSWtslaSSLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGL 257
Cdd:MTH00204 198 LLNIKLPLSIQKW----LLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEY 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 258 HYPFITL-----ALWGALMTSaiclRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANT 332
Cdd:MTH00204 274 FAPLIVMlsviaVIYGSLTTC----RQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTF 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 333 NYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTINLMAELTIMVALFNWSSLTIILTGTAIILTASYTLYMLM 412
Cdd:MTH00204 350 LYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYN 429
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 558603519 413 MTQRGTLPSHITSIQNSSTREHLLMALHMIPMILLILKPELI 454
Cdd:MTH00204 430 RISFGGGSNYLLFSRDLNRRELLAILPLIIAIFLLGIVPFII 471
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
58-410 |
1.09e-49 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 176.01 E-value: 1.09e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 58 VDQISSPLLVLSCWLLPLMIMASQN---HLEREptarkriFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILIT 134
Cdd:MTH00217 78 VDGISIFFLILTALLTPICILISWNsikFLIKE-------FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 135 RWGNQPERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTL---YLPILKLtqpatsNSWTSLASSLALLLAFMVKAPLYG 211
Cdd:MTH00217 151 IWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTdyqALCCLKI------EKELQYFIFLGFFLSLAIKIPKIP 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 212 LHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGLHYPFI-TLALWGALMTSAICLRQTDLKSLIAYSS 290
Cdd:MTH00217 225 FHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSS 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 291 VSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALP 370
Cdd:MTH00217 305 VAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIP 384
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 558603519 371 PTINLMAELTIMVALFNWSSLTIILTGTAIILTASYTLYM 410
Cdd:MTH00217 385 LSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
57-454 |
4.13e-49 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 175.11 E-value: 4.13e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 57 SVDQISSPLLVLSCWLLPLMIMASQNHLEReptaRKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITRW 136
Cdd:MTH00226 99 AVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIW 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 137 GNQPERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTL-YLPILKLTQPATSNswTSLASSLALLLAFMVKAPLYGLHLW 215
Cdd:MTH00226 175 GSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTdYLTLASCSHVVSEQ--TQKWIFLGIFLAMAVKIPIFPFHIW 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNP-SSSGLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSVSHM 294
Cdd:MTH00226 253 LPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPlGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHM 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 295 GLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTIN 374
Cdd:MTH00226 333 GLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGN 412
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 375 LMAELTIMVALFNWSSLTIILTGTAIILTASYTLYMLMMTQRGTLPSHITSIQNSSTREHLLMALHMIPMILLILKPELI 454
Cdd:MTH00226 413 FIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREFYITASMVFFAFLIGIYPIFI 492
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
113-412 |
1.11e-40 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 150.06 E-value: 1.11e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 113 SELMLFYITFEATLIPTLILITRWGNQPERLTAGIYLLFYTLVSSLPLLIiilhlhnqigtLYLPILKLTQPATSNSWTS 192
Cdd:MTH00094 82 SNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLF-----------VYLKNFFFFSLCYFDFFLS 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 193 LASSLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSssgLHYPFITLALWGALMT 272
Cdd:MTH00094 151 WEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIFSLLGMILS 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 273 SAICLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLL 352
Cdd:MTH00094 228 SFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSS 307
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 353 PLMATWWLLANLTNMALPPTINLMAELTIMVALFNWSSLTIILTGTAIILTASYTLYMLM 412
Cdd:MTH00094 308 MFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIV 367
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-411 |
1.84e-36 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 140.17 E-value: 1.84e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 55 WA-SVDQISSPLLVLSCWLLPLMIMASQNhLEREPtarkRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILI 133
Cdd:PRK12561 53 WSlGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLI 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 134 TRWGNQpERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTLYLPILKLTQPATSNSWtSLASSLALLLAFMVKAPLYGLH 213
Cdd:PRK12561 128 SIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLAL-ELLLYAGFLIAFGVKLPIFPLH 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 214 LWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGLHYP-FITLA----LWGALMTSAiclrQTDLKSLIAY 288
Cdd:PRK12561 206 TWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPaLAILGvvniIYGALNAFA----QDNVKRRLAY 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 289 SSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMA 368
Cdd:PRK12561 282 SSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLA 361
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 558603519 369 LPPTINLMAELTIMVALFN-------WSSLTIILTGTAIILTASYTLYML 411
Cdd:PRK12561 362 LPGMSGFVSELTVFLGITSsdvysstFRTITILLAAVGLILTPIYLLSML 411
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
58-404 |
2.57e-32 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 127.57 E-value: 2.57e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 58 VDQISSPLLVLSCWLLPLMIMASQNHLEREptARKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITrWG 137
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHE--RRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA-LG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 138 NQPERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTLYLPILKLTQPATSNSWtSLASSLALLLAFMVKAPLYGLHLWLP 217
Cdd:COG0651 151 GTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGL-LLAAFALLLVGFGIKAALFPLHFWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 218 KAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSG--LHYPFITLALWGALMTSAICLRQTDLKSLIAYSSVSHMG 295
Cdd:COG0651 230 DAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPAlfLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 296 LVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTINL 375
Cdd:COG0651 310 YILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGF 389
|
330 340 350
....*....|....*....|....*....|..
gi 558603519 376 MAELTIMVALFN---WSSLTIILTGTAIILTA 404
Cdd:COG0651 390 VSKWLLLQAALEagaWLLAAVLLLSSLLTLAY 421
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
57-426 |
8.08e-29 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 118.65 E-value: 8.08e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 57 SVDQISSPLLVLSCWLLPLMIMASQNHLEReptarKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITRW 136
Cdd:PRK06473 76 GVDGLSLPLLVLNSLLTLIAIYSSDESIQR-----PRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 137 GNQpERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGT---LYLPILKLTQPATsnswTSLASSLALLLAFMVKAPLYGLH 213
Cdd:PRK06473 151 GGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGAssfDYEPLRSHTLPLS----TQLLLLAPILVGFGIKIPLVPFH 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 214 LWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGLHYPFI-TLALWGALMTSAICLRQTDLKSLIAYSSVS 292
Cdd:PRK06473 226 TWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLaTWAVVSVLYGASCAIAQKDMKKMVAYSSIG 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 293 HMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGL---QPLLPLMATWWLLANLTNMAL 369
Cdd:PRK06473 306 HMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGI 385
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 558603519 370 PPTINLMAELTIMVALFNWSSLTIILTGTAIILTASYTLYMLMMTQRGTLPSHITSI 426
Cdd:PRK06473 386 PGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNL 442
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
59-457 |
5.43e-28 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 116.34 E-value: 5.43e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 59 DQISSPLLVLSCWLLPLMIMASQnhlerEPTARKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITRWGN 138
Cdd:PRK02546 86 DGLSMPLILLTGFITTLAVLAAW-----PVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 139 QpERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTLYLPILKLTQPATSNSWTSLASSLALLLaFMVKAPLYGLHLWLPK 218
Cdd:PRK02546 161 K-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGFQLLCYAGLLIA-YGVKLPIVPLHTWLPD 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 219 AHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGLHYP-FITLALWGALMTSAICLRQTDLKSLIAYSSVSHMGLV 297
Cdd:PRK02546 239 AHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFV 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 298 VAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPPTINLMA 377
Cdd:PRK02546 319 LIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVA 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 378 ELTIMVAL-------FNWSSLTIILTGTAIILTASYTLYMLMMTQRGTLPSHITSIQN---SSTREHLLMALHMIPMILL 447
Cdd:PRK02546 399 ELMVFVGFatsdaytLPFRVVVVFLAAVGVILTPIYLLSMLREIFFGPENKELVSHEKlvdAEPREVFIIACLLVPIIGI 478
|
410
....*....|
gi 558603519 448 ILKPELISGI 457
Cdd:PRK02546 479 GLYPKLVTQS 488
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
58-422 |
3.03e-26 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 110.96 E-value: 3.03e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 58 VDQISSPLLVLSCWLLPLMIMASQNHLEReptarKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITRWG 137
Cdd:PRK07363 77 VDGLSLPLLVLNSLLTWIAIYSIGENTER-----PRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 138 NQpERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTLYLPILKLTQPATSNSwTSLASSLALLLAFMVKAPLYGLHLWLP 217
Cdd:PRK07363 152 GE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLP 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 218 KAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGLHYPfiTLALWGA---LMTSAICLRQTDLKSLIAYSSVSHM 294
Cdd:PRK07363 230 DAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTisvIYGALSAIAQKDIKRMVAYSSIGHM 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 295 GLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGL-QPL--LPLMATWWLLANLTNMALPP 371
Cdd:PRK07363 308 GYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLmNPIrgLPLTSALLVLAGMASAGIPG 387
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 558603519 372 TINLMAELTIMVALFNWSSLTIILTGTAIILTASYTLYMLMMTQRGTLPSH 422
Cdd:PRK07363 388 LVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNK 438
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
111-411 |
1.42e-22 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 100.02 E-value: 1.42e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 111 SASELMLFYITFEATLIPTLILITRWGNQpERLTAGIYLLFYTLVSSLPLLiiilhlhnqIGTLYLPILKLTQPA----- 185
Cdd:CHL00011 130 SSRDLLLFFIMWELELIPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLL---------IGVLGMGLYGSNEPTlnfet 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 186 -TSNSWTSLASSLALL---LAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGLHYPF 261
Cdd:CHL00011 200 lANQSYPVALEILFYIgflIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPW 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 262 itLALWGALM---TSAICLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTH 338
Cdd:CHL00011 280 --LVIVGAIQiiyAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIR 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 339 SRILLLTRGLQPLLPLMATWWLLANLTNMALPPTINLMAELTIMVA-------LFNWSSLTIILTGTAIILTASYTLYML 411
Cdd:CHL00011 358 LVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGiitsqkyLLMPKILITFVMAIGMILTPIYLLSML 437
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-99 |
1.74e-21 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 89.12 E-value: 1.74e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 1 MLKIIIPTIMLLPLTALSPCKHLWTNITTHSLLIAAISLQWLT-PTYYPNKTSTPWASVDQISSPLLVLSCWLLPLMIMA 79
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNnPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100
....*....|....*....|
gi 558603519 80 SQNHLEREPTARKRIFASTI 99
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLL 100
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
122-449 |
6.40e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 92.34 E-value: 6.40e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 122 FEATLIPTLILITRWGNQPERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTLYLPILKL----------TQPATSNSWT 191
Cdd:PRK12667 142 LEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAkirglsfpltGGLAGNPPLA 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 192 SLASSLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGLHYP-------FITL 264
Cdd:PRK12667 222 LGVALALALWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFraalspiLIIL 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 265 ALWGALMTSAICLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLL 344
Cdd:PRK12667 302 GAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDE 381
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 345 TRGLQPLLPLMATWWLLANLTNMALPPTINLMAELTIMVALFNWSsltIILTGTAIILTASYTL--YM--LMMTQRGTLP 420
Cdd:PRK12667 382 LAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESG---FYLPALVLLIASAISLvgYFraWYSLFFGKPK 458
|
330 340
....*....|....*....|....*....
gi 558603519 421 SHitsiQNSSTREHLLMALHMIPMILLIL 449
Cdd:PRK12667 459 SG----EEVEHKESPSMSVVILVLALAVL 483
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
203-406 |
2.09e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 87.24 E-value: 2.09e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILV----NPSSSGLHYPFITLALWGALMTSAICLR 278
Cdd:PRK08375 212 LALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVfggdFRFALGLGWLLAVLALLSMLVGSLAALG 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 279 QTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATW 358
Cdd:PRK08375 292 QDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAA 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 558603519 359 WLLANLTNMALPPTINLMAELTIMVALF---NWSSLTIILTGTaiILTASY 406
Cdd:PRK08375 372 FAVASLSLIGVPPTSGFVSKWYLVVGAVeagQWLVLAVLLASS--LLALLY 420
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
213-401 |
5.57e-16 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 80.35 E-value: 5.57e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 213 HLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIIRVtilvNPSSSGLHYPFITLALWGA---LMTSAICLRQTDLKSLIAY 288
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLHSATMVKAGiYLLARL----NPVLGGTPLWQTILPLFGGltmLTGALLAVRQTDLKLILAY 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 289 SSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMA 368
Cdd:PRK12647 290 STVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
170 180 190
....*....|....*....|....*....|...
gi 558603519 369 LPPTINLMAELTIMVALFNWSSLTIILTGTAII 401
Cdd:PRK12647 370 LPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
206-449 |
2.21e-14 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 74.97 E-value: 2.21e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 206 KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNpSSSGLHYP---FITLALWGALMTSAICLRQTDL 282
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILID-AAIGSDFPgrlLLIFGLLSVLVAAFFLLRQRDI 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 283 KSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLA 362
Cdd:PRK06458 306 KRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLG 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 363 NLTNMALPPTINLMAELTIMVALFN---WSSLTIILTGTAIILTAsytlyMLMMTQRGTLPSHitsiqNSSTREHLLMAL 439
Cdd:PRK06458 386 ALAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLLLTLAFAA-----LVRRVAGMVFGEP-----PEAVNRGDLGWL 455
|
250
....*....|
gi 558603519 440 HMIPMILLIL 449
Cdd:PRK06458 456 TTSPMFVHLV 465
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
203-412 |
4.93e-12 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 67.86 E-value: 4.93e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGLHYPFITLALwGALMTSAIC---LRQ 279
Cdd:PRK08676 216 FLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsmLSQ 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 280 TDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWW 359
Cdd:PRK08676 295 RNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGV 374
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 558603519 360 LLANLTNMALPPTINLMAELTIMVALFNWSSLTIILTGTAIILTASYTLYMLM 412
Cdd:PRK08676 375 ILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLL 427
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
262-449 |
5.82e-11 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 64.40 E-value: 5.82e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 262 ITLALWGALMTSAICLRQTDLKSLIAYSSVSHMGLVVAATMIQtqwAISGAMILMIAHGLTSSMLFCLANTNYERTHSRI 341
Cdd:COG1009 279 AIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRD 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 342 LLLTRGLQPLLPLMATWWLLANLTNMALPPTINLMAELTIMVALFNWSSLTIILTGTAII---LTASYTLYMLMMT---- 414
Cdd:COG1009 356 IRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLVffgk 435
|
170 180 190
....*....|....*....|....*....|....*
gi 558603519 415 QRGTLPSHItsiqnssTREHLLMAlhmIPMILLIL 449
Cdd:COG1009 436 PRPKTPKHP-------HESPWLMT---LPLVVLAV 460
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
57-392 |
6.91e-11 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 64.37 E-value: 6.91e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 57 SVDQISSPLLVLSCWLLPLMIMASQNHLER-EPTARKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITR 135
Cdd:PRK08667 74 HIDRLAAFFIILIGLVSLCVAIYSLGYNEHmSSNERANLLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMN 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 136 WGNQPERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTLYLPILKLTQPATSNSWtslassLALLLAFMVKAPLYGLHLW 215
Cdd:PRK08667 154 DYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGILSLVF------LLLFLGFGIKAGIIPFHKW 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIIRVtiLVNPSSSGLHYPFITLAL--WGALMTSAICLRQTDLKSLIAYSSVSH 293
Cdd:PRK08667 228 LPYAHPASPSNVSALMSGVMLKVAVYGLVRF--LMDVLSPELWWGVLILLAgsISALLGVIYALKEHDLKGLLAYSSIEN 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 294 MGLV-----------VAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLA 362
Cdd:PRK08667 306 IGIIlmgiglyvifgVYGLDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVG 385
|
330 340 350
....*....|....*....|....*....|
gi 558603519 363 NLTNMALPPTINLMAELTIMVALFNWSSLT 392
Cdd:PRK08667 386 AVSIAALPPFNGFASELLLYESFFQSFSVA 415
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
203-406 |
7.07e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 63.82 E-value: 7.07e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNpsssGLHYPFITLALWGALMTSAICLRQTDL 282
Cdd:PRK07234 194 LLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVP----GLDLIVRIFGVGTALLGVLFALLEKDL 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 283 KSLIAYSSVSHMGLVVAATMIqtqwaisgAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLmatwwLLA 362
Cdd:PRK07234 270 KRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPL-----TMA 336
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 558603519 363 NLTNMALPPTINLMAELTIMVALFNWSSLTIILTGtaiILTASY 406
Cdd:PRK07234 337 SFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAA---VGTAAS 377
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
203-405 |
9.88e-11 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 63.63 E-value: 9.88e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSS--SGLHYPFITLALWGALMTSAICLRQT 280
Cdd:PRK08377 216 LAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSALRQK 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 281 DLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWL 360
Cdd:PRK08377 296 NVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALT 375
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 558603519 361 LANLTNMALPPTINLMAELTIMVALFNWSSLTIIltgtAIILTAS 405
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPV----ALVLGAS 416
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-409 |
1.35e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 63.06 E-value: 1.35e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 58 VDQISSPLLVLSCW-LLPLMIMA-SQNHLEREPTARKRIFASTILLAQLFLLLAFSASELMLFYITFEATLIPTLILITR 135
Cdd:PRK12665 74 VDRLSALMLVVSSVvLLAVLVYAiGQGIRDGDEEQPVSIFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLLTL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 136 wGNQPERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTLYLPILKLTQPATSnSWTSLASSLALLLAFMVKAPLYGLHLW 215
Cdd:PRK12665 154 -GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELP-SGTRTALFAVLLVAFGIKAAVFPLSFW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 216 LPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSglhypFITLALWGALMTSAI----CLRQTDLKSLIAYSSV 291
Cdd:PRK12665 232 LPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGGG-----LDTLLMVVALLTMVVgilgAIAQSDIKRLLSFTLV 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 292 SHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPP 371
Cdd:PRK12665 307 SHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPP 386
|
330 340 350
....*....|....*....|....*....|....*....
gi 558603519 372 TINLMAELTIMVA-LFNWSSLTIILTGTAIIlTASYTLY 409
Cdd:PRK12665 387 FSGFIGKVALLEAgAEDGTWLAWALVAGGVV-TSLLTLY 424
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
112-372 |
3.60e-10 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 62.37 E-value: 3.60e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 112 ASELMLFYITFEATLIPTLILITRWGNQPErlTAGIYLLFYTLVSSLPLLIIILHLHNQIGTLYLP-ILKLTQPATSNSW 190
Cdd:PRK12650 129 ADDVVVLFVAWELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSgILHSDVWAEKPGL 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 191 TSLASSLALLLAFmVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNpSSSGLHYPFITLALWGAL 270
Cdd:PRK12650 207 TTVVAVLIAVAAF-TKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFH-DVAVWNWLLIIVGMITAL 284
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 271 MTSAICLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQP 350
Cdd:PRK12650 285 MGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWR 364
|
250 260
....*....|....*....|..
gi 558603519 351 LLPLMATWWLLANLTNMALPPT 372
Cdd:PRK12650 365 RMPFTFVSVTIAALSMAAVPPL 386
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
203-371 |
1.12e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 57.21 E-value: 1.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTI-LVNPSSSGLHYPFITLALWGALMTSAICLRQTD 281
Cdd:PRK06521 220 FGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFdLLGAPGWWWGVLVLALGAISAVLGVLYALAEHD 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 282 LKSLIAYSSVSHMGLVVAA---TMI--------QTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQP 350
Cdd:PRK06521 300 LKRLLAYSTIENIGIIFVGlglAMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIR 379
|
170 180
....*....|....*....|.
gi 558603519 351 LLPLMATWWLLANLTNMALPP 371
Cdd:PRK06521 380 RMPWTAWAFLIGCLAISALPP 400
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
205-398 |
1.18e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 57.05 E-value: 1.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 205 VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGLHYP-----FITLALWGALMTSAICLRQ 279
Cdd:PRK12662 221 IKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDVFKANFVFTTLpfnnvFMILAALAIVFGSVLAILS 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 280 TDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANT---NYERTHSRILLltrGLQPLLPLMA 356
Cdd:PRK12662 301 KDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---NLWKSMPKIT 377
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 558603519 357 TWWLLANLTNMALPPTINLMAELTIMVALFN---WSSLTIILTGT 398
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYILDAFIKsnaWIGLVVLLVGS 422
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
205-327 |
2.98e-08 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 56.16 E-value: 2.98e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 205 VKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVtILVNPSS------------SGLHYPFITLALWGALMT 272
Cdd:PRK08668 208 AKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLV-LYVLPGTklfsefgtyrgvPLFNYILAWLGNISIIVG 286
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 558603519 273 SAICLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLF 327
Cdd:PRK08668 287 TLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
204-449 |
7.75e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 54.44 E-value: 7.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 204 MVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSS-----GLHYPFITLALWGALMTSAICLR 278
Cdd:PRK06589 221 IAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYlqrifAEFNWLIFIPIVSIFYSSLKALK 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 279 QTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATW 358
Cdd:PRK06589 301 TDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFI 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 359 WLLANLTNMALPPTINLMAELTIMVALFNWS--SLTIILTGTAIILTASYTLYMLMMTQRGTLPShitSIQNSSTREHLL 436
Cdd:PRK06589 381 ISISSLSLIGIPIFSGFISKFLILLAASEQNqpWLSIIVMLVVIASSILSALYLLKILSSIYKPS---LSENSFITKSLP 457
|
250
....*....|...
gi 558603519 437 MALHmIPMILLIL 449
Cdd:PRK06589 458 YLMQ-ISVITCCC 469
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
118-407 |
2.30e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 53.18 E-value: 2.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 118 FYITFEATLIPTLILITRWGNQPERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTLYLPILKLtQPATSNSWTSLASSL 197
Cdd:PRK08376 146 FFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAV-KMSENPTVVAKIALA 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 198 ALLLAFMVKAPLYGLHLWLPKAHVEAPiAGSMLLAALLLKLGGYGIIRV-----TILVNPSSSGlhYPFITLALWGALMT 272
Cdd:PRK08376 225 LFIAGLAMKSGAVPVHMWLPDAYPAAP-SSISAMLLVIKQAGLYALARVlfsiyGPAINLATVG--WVIIILGCLTMFVG 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 273 SAICLRQTDLKSLIAYSSVSH---------MGLVVAATMIQTQW---AISGAMILMIAHGLTSSMLFCLANTNYERTHSR 340
Cdd:PRK08376 302 VAMAVVQKDVKRLLAYHSVSQigymllglgVGLAALGDPAMASYgeiALAGGIYHIVNHALYKALLFLTAGAVIYETGTR 381
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 558603519 341 ILLLTRGLQPLLPLMATWWLLANLTNMALPPTINLMAELTIM--VALFNwSSLTIILTGTAIILTASYT 407
Cdd:PRK08376 382 NLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYesSALFN-PILGVIAMIGSVLTLASFV 449
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-412 |
4.71e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 51.87 E-value: 4.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 119 YITFEATLIPTLILITRWGNQPERLTAGIYLLFyTLVSSLPLLIIILHLHNQIGTLYLPIL--KLTQPATSNSWTSLASS 196
Cdd:PRK07691 134 FVFFEVMLMASYVLIVIGGTKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMADIsvKIAELSAGQTGLITVVA 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 197 LALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGL-HYPFITLALWGALMTSAI 275
Cdd:PRK07691 213 ILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFtHYLILILALLTIIFGVIG 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 276 CLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLM 355
Cdd:PRK07691 293 AVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVL 372
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 558603519 356 ATWWLLANLTNMALPPTINLMAELTIMVALFNWSSLTIiltGTAIILTASYTLYMLM 412
Cdd:PRK07691 373 GWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVS---GIIVLLSSLLVLYSVI 426
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
112-448 |
5.35e-07 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 52.06 E-value: 5.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 112 ASELMLFYITFEATLIPTLILITRWGNQPERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTLYLPILKLTQPATSNSWT 191
Cdd:PRK12646 129 SDNTILMYVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGL 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 192 SLASSLALLLAFMVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIIRVTILVNPSSSGLhYPFITLALWGAL 270
Cdd:PRK12646 209 FIPMIFMFLLGAFTKSAQFPFHIWLPRA-MAAPTPVSAYLHSATMVKAGiFLLFRFTPLLGLSNMYI-YIVTFVGLITML 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 271 MTSAICLRQTDLKSLIAYSSVSHMGLVVAATMI------QTQWAIS--------GAMILMIAHGLTSSMLFCLANTNYER 336
Cdd:PRK12646 287 FGSITALKQWDLKGILAYSTISQLGMIMAMVGIgggyaqHQQDAIAsiyvfvlfAALFHLMNHAIFKCALFMGVGIIDHE 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 337 THSRILLLTRGLQPLLPLMATWWLLANLTnMALPPTIN--LMAEL-------TIMVALFNWsSLTIILTGTAII---LTA 404
Cdd:PRK12646 367 AGTRDIRILSGMRQLFPKMNLVMTIAALS-MAGVPFLNgfLSKEMfldaltqTGQLSQFSL-ISMIIIVFIGVIasiFTF 444
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 558603519 405 SYTLYMLMMTQRGtlPSHITSIQNSSTREHLLMALHMIPMILLI 448
Cdd:PRK12646 445 TYALYMVKEVFWG--KYDSKVFTKKNIHEPWLFSLPSLILMVLV 486
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
119-371 |
3.25e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 49.18 E-value: 3.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 119 YITFEATLIPTLILITrWGNQPERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTLYLPILKLTQPATSNSWTSLASSLA 198
Cdd:PRK12663 134 YVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 199 LLLAFMVKAPLYGLHlWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGLHYPFITLALWGALMTSAI-CL 277
Cdd:PRK12663 213 FLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALgAL 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 278 RQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMAT 357
Cdd:PRK12663 292 AYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGA 371
|
250
....*....|....
gi 558603519 358 WWLLANLTNMALPP 371
Cdd:PRK12663 372 LFLILIFAIGGLPP 385
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
115-395 |
4.82e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 48.77 E-value: 4.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 115 LMLFYITFEATLIPTLILITRWGNQPERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTLYLpilkltQPATSNSWTSLA 194
Cdd:MTH00062 93 SLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNF------SDWGSDDSVSLI 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 195 SSLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGLHYPFITLALWGALMTSA 274
Cdd:MTH00062 167 VYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFFLITAC 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 275 ICLrqtDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPL 354
Cdd:MTH00062 247 SEL---DGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLV 323
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 558603519 355 MATWWLLANLTNMALPPTINLMAELTIMVALFNWSSLTIIL 395
Cdd:MTH00062 324 LRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFW 364
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
203-330 |
5.82e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 48.69 E-value: 5.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 203 FMVKAPLYGLHLWLPKAHVEA--PIAGSMllaALLLKLGGYGIIRVTILVNPSSSGLHYPFITLALW-GALMTSAI---- 275
Cdd:PRK12666 220 FLIKAAMWPLNFWLPPAYAAAsaPVAALF---AIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLpGGLATLAFgaig 296
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 558603519 276 CLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLA 330
Cdd:PRK12666 297 VLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA 351
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
277-323 |
7.95e-06 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 47.89 E-value: 7.95e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 558603519 277 LRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTS 323
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMT 335
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
255-371 |
1.43e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 47.33 E-value: 1.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 255 SGLHYPFITLALWGALMTSAICLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNY 334
Cdd:PRK06277 263 PSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVS 342
|
90 100 110
....*....|....*....|....*....|....*..
gi 558603519 335 ERTHSRILLLTRGLQPLLPLMATWWLLANLTNMALPP 371
Cdd:PRK06277 343 YRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
243-404 |
1.53e-05 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 47.03 E-value: 1.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 243 IIRVTILVNPS-SSGLHYPFITLA----LWGALMTsaicLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMI 317
Cdd:COG1007 253 LLRLLVEAFPGlAADWQLLLAVLAvlsmTVGNLAA----LAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLL 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 318 AHGLTS----SMLFCLANTNYERTHSRILlltRGL---QPLLPLMATWWLLAnltnMA-LPPTINLMAELTIMVALfnWS 389
Cdd:COG1007 329 AYLFMNlgafAVILLLSRKGGEAEEIEDL---AGLarrSPLLALAMTIFLLS----LAgIPPTAGFFGKFYVFSAA--VE 399
|
170
....*....|....*
gi 558603519 390 SLTIILTGTAIILTA 404
Cdd:COG1007 400 AGLYWLAVIAVLNSV 414
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
206-411 |
2.26e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 46.84 E-value: 2.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 206 KAPLYGLHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIIRVTILVNpSSSGLHYPFITLALWGALMTSAICLR 278
Cdd:PRK12644 216 KSAIVPFHFWLPGA-MAAPTpvsaylhAAAMVKA------GIYLVARLAPGFA-DVPVWRPTVLVLGLATMLLGGWRALR 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 279 QTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATW 358
Cdd:PRK12644 288 QHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVLAVV 367
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 558603519 359 WLLANLTNMALPPTINLMAELTIMVALFNWSSL----TIILTGTAI--ILTASYTLYML 411
Cdd:PRK12644 368 AALAAASMAGLPPLLGFVAKEAALEAVLHDGALgpagPVVLAGIVLgsILTVAYSLRFL 426
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
212-447 |
5.63e-05 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 45.35 E-value: 5.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 212 LHLWLPKAhVEAPI-------AGSMLLAalllklGGYGIIRVTILVNPSSSGLHYPFITLALWGALMTSAICLRQTDLKS 284
Cdd:PRK06525 226 FYSWLPDA-MEAPTpasaylhAASMVKV------GVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKR 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 285 LIAYSSVSHMGLVVAATMIQ---TQWAISGAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLL 361
Cdd:PRK06525 299 LLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCV 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 362 ANLTNMALPPTINLMAELTIMVALFNWSSLTIILTGTAIIL----TASYTLYMLMMTQrgTLPSHITSIQNSSTREHLLM 437
Cdd:PRK06525 379 AALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLliesVASFAWFLRWFGR--VVFGEPSEAVADAAPLPGSM 456
|
250
....*....|
gi 558603519 438 ALHMIPMILL 447
Cdd:PRK06525 457 KLVLIVLIVM 466
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
203-327 |
7.21e-05 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 45.27 E-value: 7.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 203 FMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVtilvnpsssglhYP-FITLALWGALMT--SAI-CLR 278
Cdd:PRK12668 193 FGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARA------------FPgTELLIYIGAAMAvyGVFfALL 260
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 558603519 279 QTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTSSMLF 327
Cdd:PRK12668 261 ENDLRRLLSYHIVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
111-454 |
7.75e-05 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 44.94 E-value: 7.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 111 SASELMLFYITFEATLIPTLILITRWGNQPERLTAGIYLLFYTLVSSLPLLIIILHLHNQIGTLYL-PILKLTQPATSNS 189
Cdd:TIGR01770 120 SSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFeDLLLFLSNGMLNI 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 190 WTSLASSLALLLAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPS-SSGLHYPFITLALWG 268
Cdd:TIGR01770 200 SLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGfSEAWQIFLAIIAFLS 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 269 ALMTSAICLRQTDLKSLIAYSSVSHMGLVVAATMIQTQWAISGAMILMIAHGLTS----SMLFCLANTNYERTHSriLLL 344
Cdd:TIGR01770 280 MLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSlgafGVLSLLRSYKDEWIEY--ISD 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 345 TRGLQPLLPLMATWWLLANLTNMALPPTINLMAELTIMVALFN----WSSLTIILTGTaiiLTASYTL----YMLMMTQR 416
Cdd:TIGR01770 358 FAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKsglyWLAVIAVLTSV---IGAFYYLrvvkVMYFDKPE 434
|
330 340 350
....*....|....*....|....*....|....*...
gi 558603519 417 GTLPSHITSIQNSstrehLLMALHMIPMILLILKPELI 454
Cdd:TIGR01770 435 RRIPSNPQSKAQS-----LLLSISALFILFLGLFPSLI 467
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
204-449 |
1.69e-04 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 43.91 E-value: 1.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 204 MVKAPLYGLHLWLPKAhVEAPIAGSMLLAALLLKLGG-YGIIRVTILVNPSSSGLHYPFITLALwGALMTSAICLRQTDL 282
Cdd:MTH00020 221 VGKSAQLGLHTWLPDA-MEGPTPVSALIHAATMVTAGvFLLIRSSPLFEQAPLALIIVTIVGSL-TVFFAATVGLVQNDL 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 283 KSLIAYSSVSHMGLVVAATMIqTQWAISgaMILMIAHGLTSSMLFCLANT-----NYERTHSRIllltRGLQPLLPLMAT 357
Cdd:MTH00020 299 KKVIAYSTCSQLGYMVVACGL-SHYSIS--LFHLMNHAFFKALLFLSAGSvihalSDEQDMRKM----GGLISFLPLTYI 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 358 WWLLANLTNMALPPTINLMA-ELTIMVALF-NWSSLTIILTGTAIILTASYTLYMLmmtqrgtlpsHITSIQNSSTREHL 435
Cdd:MTH00020 372 FFLIGSLSLMGFPYLTGFYSkDLILELAFGqYYLIFAYWLGCFSALLTAFYSIRLI----------YLTFLSNTNLKKAV 441
|
250 260
....*....|....*....|
gi 558603519 436 LMALH------MIPMILLIL 449
Cdd:MTH00020 442 FFHLHegdwnlLLPLGILAL 461
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
206-370 |
7.10e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 38.79 E-value: 7.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 206 KAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIIRVTILVNPSSSGLHYPFITLALwGALMTSAICLRQTDLKSL 285
Cdd:MTH00032 238 KSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGAL-TAFFAATVGLVQNDLKKV 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 286 IAYSSVSHMGLVVAATMIQTQWAISgaMILMIAHGLTSSMLFCLA-----NTNYERTHSRILlltRGLQPLLPLMATWWL 360
Cdd:MTH00032 317 IAYSTCSQLGYMVLIIGIEGSHNVG--LFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSIPFTYTMML 391
|
170
....*....|
gi 558603519 361 LANLTNMALP 370
Cdd:MTH00032 392 IGSFSIMGLP 401
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
212-371 |
8.74e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 38.35 E-value: 8.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 212 LHLWLPKAhVEAPIAGSMLLAALLLKLGGYGIIRVTILV--NPSSSGLhypFITLALWGALMTSAICLRQTDLKSLIAYS 289
Cdd:PRK07390 240 LHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQPVLalSPVALTV---LIVIGTVTAIGASLVAIAQIDIKRALSYS 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603519 290 SVSHMGLVVAAtmIQTQWAISgAMILMIAHGLTSSMLFCLANTNYERTHSRILLLTRGLQPLLPLMATWWLLANLTNMAL 369
Cdd:PRK07390 316 TSAYLGLVFIA--VGLQQPDI-ALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVAL 392
|
..
gi 558603519 370 PP 371
Cdd:PRK07390 393 LP 394
|
|
| |
