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Conserved domains on  [gi|558603518|ref|YP_008815607|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Campylorhynchus zonatus]

Protein Classification

ND4L family protein( domain architecture ID 10009575)

ND4L family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 4.26e-41

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177184  Cd Length: 98  Bit Score: 130.35  E-value: 4.26e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518  1 MTYLHLSFYSAFTLSGLGLAFHRTHLVSALLCLESMMLSLYVALTMWPIQMQAPTFALLPILVLTFSACEASTGLALLVA 80
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*...
gi 558603518 81 STRTHGSDRLHNFNLLKC 98
Cdd:MTH00125 81 TTRTHGSDHLKNLNLLQC 98
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 4.26e-41

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 130.35  E-value: 4.26e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518  1 MTYLHLSFYSAFTLSGLGLAFHRTHLVSALLCLESMMLSLYVALTMWPIQMQAPTFALLPILVLTFSACEASTGLALLVA 80
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*...
gi 558603518 81 STRTHGSDRLHNFNLLKC 98
Cdd:MTH00125 81 TTRTHGSDHLKNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
11-98 2.40e-12

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 57.57  E-value: 2.40e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518  11 AFTLSGLGLAFHRTHLVSALLCLESMMLSLYVALTMWPIQMQAPTFALLPILVLTFSACEASTGLALLVASTRTHGSDRL 90
Cdd:pfam00420  8 LLFLIGLYGLLLRRNLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                 ....*...
gi 558603518  91 HNFNLLKC 98
Cdd:pfam00420 88 DSLNLLKG 95
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 4-97 2.48e-05

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 39.28  E-value: 2.48e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518  4 LHLSFYSAFTLSGLGL--AFHRTHLVSALLCLESMMLSLYVALTMWPIQMQAPTFALLPILVLTFSACEASTGLALLVAS 81
Cdd:COG0713   3 LEHYLILAAILFAIGLygVLTRRNLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAIIVAL 82

                        90
                ....*....|....*.
gi 558603518 82 TRTHGSDRLHNFNLLK 97
Cdd:COG0713  83 YRNRGTIDVDDLNELK 98
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 4.26e-41

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 130.35  E-value: 4.26e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518  1 MTYLHLSFYSAFTLSGLGLAFHRTHLVSALLCLESMMLSLYVALTMWPIQMQAPTFALLPILVLTFSACEASTGLALLVA 80
Cdd:MTH00125  1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                        90
                ....*....|....*...
gi 558603518 81 STRTHGSDRLHNFNLLKC 98
Cdd:MTH00125 81 TTRTHGSDHLKNLNLLQC 98
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 1-98 3.36e-39

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 125.46  E-value: 3.36e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518  1 MTYLHLSFYSAFTLSGLGLAFHRTHLVSALLCLESMMLSLYVALTMWPIQMQAPTFALLPILVLTFSACEASTGLALLVA 80
Cdd:MTH00126  1 MTPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAAPMLLLAFSACEASAGLALLVA 80

                        90
                ....*....|....*...
gi 558603518 81 STRTHGSDRLHNFNLLKC 98
Cdd:MTH00126 81 TARTHGTDRLQNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-98 6.37e-37

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 119.71  E-value: 6.37e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518  1 MTYLHLSFYSAFTLSGLGLAFHRTHLVSALLCLESMMLSLYVALTMWPIQMQAPTFALLPILVLTFSACEASTGLALLVA 80
Cdd:MTH00067  1 MSPTYFTFYSAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSLPMFMLTFSACEASTGLALMVA 80

                        90
                ....*....|....*...
gi 558603518 81 STRTHGSDRLHNFNLLKC 98
Cdd:MTH00067 81 TTRTHGTDHLKNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 1-98 5.71e-23

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 84.60  E-value: 5.71e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518  1 MTYLHLSFYSAFTLSGLGLAFHRTHLVSALLCLESMMLSLYVALTMWPIQMQAPTFALLPILVLTFSACEASTGLALLVA 80
Cdd:MTH00107  1 MSLIYMNIMLAFTISLLGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMPIILLVFAACEAAVGLALLVM 80

                        90
                ....*....|....*...
gi 558603518 81 STRTHGSDRLHNFNLLKC 98
Cdd:MTH00107 81 VSNTYGTDYVQNLNLLQC 98
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 4-96 2.17e-19

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 75.37  E-value: 2.17e-19
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518  4 LHLSFYSAFTLSGLGLAFHRTHLVSALLCLESMMLSLYVALTMWPIQMQAPTFALLPILVLTFSACEASTGLALLVASTR 83
Cdd:MTH00181  1 MMFVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNR 80

                        90
                ....*....|...
gi 558603518 84 THGSDRLHNFNLL 96
Cdd:MTH00181 81 THGSDHLLKFNLL 93
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 1-97 1.16e-16

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 68.41  E-value: 1.16e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518  1 MTYLHLSFYSAFTLSGLGLAFHRTHLVSALLCLESMMLSLYVALTMWPIQMQAPTFALLPILVLTFSACEASTGLALLVA 80
Cdd:MTH00043  1 MNIILIIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNLSFSLLLLTLSACEASIGLSLMVL 80

                        90
                ....*....|....*..
gi 558603518 81 STRTHGSDRLHNFNLLK 97
Cdd:MTH00043 81 LSRNHNSDLVASLNLLQ 97
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
11-98 2.40e-12

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 57.57  E-value: 2.40e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518  11 AFTLSGLGLAFHRTHLVSALLCLESMMLSLYVALTMWPIQMQAPTFALLPILVLTFSACEASTGLALLVASTRTHGSDRL 90
Cdd:pfam00420  8 LLFLIGLYGLLLRRNLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIYRTHGTDDV 87


                 ....*...
gi 558603518  91 HNFNLLKC 98
Cdd:pfam00420 88 DSLNLLKG 95
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 6-98 1.10e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 55.75  E-value: 1.10e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518  6 LSFYSAFTLSGLGLAFHRTHLVSALLCLESMMLSLYVALTMWPIQMQAPTFALLpiLVLTFSACEASTGLALLVASTRTH 85
Cdd:MTH00188  7 LVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEKELYLSL--VLLTFAACEASVGLALLVSLIRSH 84

                        90
                ....*....|...
gi 558603518 86 GSDRLHNFNLLKC 98
Cdd:MTH00188 85 GSDYVSSLNLIKC 97
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-98 2.18e-09

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 49.84  E-value: 2.18e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518  1 MTYLHLSFYSAFTLSGLGLAFHRTHLVSALLCLESMMLSLYVAL-TMWPIQMQAPTFALLpilVLTFSACEASTGLALLV 79
Cdd:MTH00149  2 MFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMfSSSGLISFSSYLFLI---ILTFGACEASLGLSLLV 78

                        90
                ....*....|....*....
gi 558603518 80 ASTRTHGSDRLHNFNLLKC 98
Cdd:MTH00149 79 SLIRLHGNDYVSSLSSLKF 97
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 12-98 2.98e-08

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 47.05  E-value: 2.98e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518 12 FTLSGLGLAFHRTHLVSALLCLESMMLSLyVALTMWPIQMQAPTFALLPILVLTFSACEASTGLALLVASTRTHGSDRLH 91
Cdd:MTH00013 12 PFISMFNLSLQRKHLLMSLLSLEAMILSL-ALFIPLSLMFANQVNGMLAIVLLTFGACEASLGLSLLVLMTRSYGNDMLK 90


                ....*..
gi 558603518 92 NFNLLKC 98
Cdd:MTH00013 91 SLTSNKC 97
ND4L MTH00180
NADH dehydrogenase subunit 4L; Provisional
 12-97 6.02e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177231  Cd Length: 99  Bit Score: 46.18  E-value: 6.02e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518 12 FTLSGLGLAFHRTHLVSALLCLESMMLSLYVALTMWPIQMQAPTFALLPILVLTFSACEASTGLALLVASTRTHGSDRLH 91
Cdd:MTH00180 13 FILGVLGIVLNRSNLIIMLMSIELMLLAISLLFLINSVAIDNLIGQIFTIMILTVAAAESAIGLAILVAYYRIRGTIAVK 92


                ....*.
gi 558603518 92 NFNLLK 97
Cdd:MTH00180 93 SLNLLR 98
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 3-92 5.97e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 43.22  E-value: 5.97e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518  3 YLHLSFYSAFTLSGLGLAFHRTHLVSALLCLESMMLSLYVALTMWPIQMQAPTFalLPILVLTFSACEASTGLALLVAST 82
Cdd:MTH00162  2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYELY--FLLFFLTFSVCEGALGLSILVSMI 79

                        90
                ....*....|
gi 558603518 83 RTHGSDRLHN 92
Cdd:MTH00162 80 RSHGNDYFSS 89
ND4L MTH00001
NADH dehydrogenase subunit 4L; Provisional
 12-97 1.01e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177099  Cd Length: 99  Bit Score: 40.43  E-value: 1.01e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518 12 FTLSGLGLAFHRTHLVSALLCLESMMLSLYVALTMWPIQMQAPTFALLPILVLTFSACEASTGLALLVASTRTHGSDRLH 91
Cdd:MTH00001 13 FLLGIWGIILNRGHFIIMLVSIELVLLSTFFLFLINSIEIDLLIEQIFTIMGLTIAAAESAIGLAIMVAYYRIRGTISLK 92


                ....*.
gi 558603518 92 NFNLLK 97
Cdd:MTH00001 93 SLNSLR 98
PRK05715 PRK05715
NADH-quinone oxidoreductase subunit NuoK;
12-97 2.41e-05

NADH-quinone oxidoreductase subunit NuoK;


Pssm-ID: 180218  Cd Length: 100  Bit Score: 39.39  E-value: 2.41e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518  12 FTLSGLGLaFHRTHLVSALLCLESMMLSLYVALTMWPIQMQAPTFALLPILVLTFSACEASTGLALLVASTRTHGSDRLH 91
Cdd:PRK05715  15 FCIGLVGL-LLRRNAIVVLMSIELMLNAVNLNFVAFSSYLGDLDGQVFAFFVITVAAAEAAIGLAILLQLYRNRGTIDVD 93


                 ....*.
gi 558603518  92 NFNLLK 97
Cdd:PRK05715  94 DLNELK 99
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 4-97 2.48e-05

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 39.28  E-value: 2.48e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518  4 LHLSFYSAFTLSGLGL--AFHRTHLVSALLCLESMMLSLYVALTMWPIQMQAPTFALLPILVLTFSACEASTGLALLVAS 81
Cdd:COG0713   3 LEHYLILAAILFAIGLygVLTRRNLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAIIVAL 82

                        90
                ....*....|....*.
gi 558603518 82 TRTHGSDRLHNFNLLK 97
Cdd:COG0713  83 YRNRGTIDVDDLNELK 98
ndhE CHL00015
NADH dehydrogenase subunit 4L
 1-97 6.11e-05

NADH dehydrogenase subunit 4L


Pssm-ID: 176958  Cd Length: 101  Bit Score: 38.45  E-value: 6.11e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 558603518   1 MTYLHLSFYSAFTLS-GL-GLAFHRtHLVSALLCLESMMLSLYVALTMW-----PIQMQAPTFAllpILVLTFSACEAST 73
Cdd:CHL00015   1 MMLEHVLILSAYLFSiGIyGLITSR-NMVRALMCLELILNAVNINFVTFsdffdSRQLKGDIFS---IFVIAIAAAEAAI 76

                         90       100
                 ....*....|....*....|....
gi 558603518  74 GLALLVASTRTHGSDRLHNFNLLK 97
Cdd:CHL00015  77 GLAIVSSIYRNRKSTRINQSNLLK 100
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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