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Conserved domains on  [gi|533206275|ref|YP_008474635|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Variola louti]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 7.64e-75

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 217.09  E-value: 7.64e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   1 MNLVSTVIFIATALSLALAVLSFWLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 533206275  81 QLTSPMLTFLWASTVLALLTIGLIYEWVQGGLDWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 7.64e-75

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 217.09  E-value: 7.64e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   1 MNLVSTVIFIATALSLALAVLSFWLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 533206275  81 QLTSPMLTFLWASTVLALLTIGLIYEWVQGGLDWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-113 1.83e-31

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 106.74  E-value: 1.83e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   20 VLSFWLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLlpLPWGDQLTSPMLTFLWASTV-LAL 98
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFGFVEMLIfIAI 79

                          90
                  ....*....|....*
gi 533206275   99 LTIGLIYEWVQGGLD 113
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 7-114 5.49e-27

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 95.96  E-value: 5.49e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   7 VIFIATALSLALAVLSFWLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLlpLPWGDQLTSPM 86
Cdd:COG0838   11 FLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRELG 88

                         90       100
                 ....*....|....*....|....*....
gi 533206275  87 LTFLWASTV-LALLTIGLIYEWVQGGLDW 114
Cdd:COG0838   89 WFGLIEMLVfIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 7.64e-75

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 217.09  E-value: 7.64e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   1 MNLVSTVIFIATALSLALAVLSFWLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 533206275  81 QLTSPMLTFLWASTVLALLTIGLIYEWVQGGLDWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-116 7.05e-60

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 179.42  E-value: 7.05e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   3 LVSTVIFIATALSLALAVLSFWLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQL 82
Cdd:MTH00069   1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 533206275  83 TSPMLTFLWASTVLALLTIGLIYEWVQGGLDWAE 116
Cdd:MTH00069  81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-115 6.63e-56

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 169.29  E-value: 6.63e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   2 NLVSTVIFIATALSLALAVLSFWLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQ 81
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 533206275  82 LTSPMLTFLWASTVLALLTIGLIYEWVQGGLDWA 115
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-116 6.61e-48

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 148.93  E-value: 6.61e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   1 MNLVSTvIFIATALSLALAVLSFWLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00106   1 MNLMLT-LLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 533206275  81 QLTSPMLTFLWASTVLALLTIGLIYEWVQGGLDWAE 116
Cdd:MTH00106  80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 9.71e-43

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 135.88  E-value: 9.71e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   1 MNLVSTVIFIATALSLALAVLSFWLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 533206275  81 QLTSPMLTFLWASTVLALLTIGLIYEWVQGGLDWAE 116
Cdd:MTH00042  81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-114 3.77e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 131.94  E-value: 3.77e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   1 MNLVSTVIFIATALSLALAVLSFWLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 533206275  81 QLTSPmlTFLWASTVLALLTIGLIYEWVQGGLDW 114
Cdd:MTH00203  81 QLSSL--SLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 1.77e-31

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 107.25  E-value: 1.77e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   1 MNLVSTVIFIATALSLALAVLSFWLPQM-NPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLSKRsYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 533206275  80 DQLTSPMLTFLWASTVLALLTIGLIYEWVQGGLDWAE 116
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-113 1.83e-31

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 106.74  E-value: 1.83e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   20 VLSFWLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLlpLPWGDQLTSPMLTFLWASTV-LAL 98
Cdd:pfam00507   2 LLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRELGWFGFVEMLIfIAI 79

                          90
                  ....*....|....*
gi 533206275   99 LTIGLIYEWVQGGLD 113
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-114 4.62e-30

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 103.70  E-value: 4.62e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   3 LVSTVIFIATALSLALAVLSFWL-PQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQ 81
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLsKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 533206275  82 LTSPMLTFLWASTVLALLTIGLIYEWVQGGLDW 114
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 8-115 1.21e-27

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 98.01  E-value: 1.21e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   8 IFIATALSLALAVLSFWLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLlpLPWGDQL-TSPM 86
Cdd:PRK06602  15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFrEIGW 92

                         90       100
                 ....*....|....*....|....*....
gi 533206275  87 LTFLWASTVLALLTIGLIYEWVQGGLDWA 115
Cdd:PRK06602  93 LGFVEAMIFILVLLVGLVYLWRKGALDWE 121
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 7-114 1.46e-27

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 97.47  E-value: 1.46e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   7 VIFIATALSLALAVLSFWLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLlpLPWGDQLTSPM 86
Cdd:MTH00055  11 LLLFSIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQIG 88

                         90       100
                 ....*....|....*....|....*....
gi 533206275  87 LTFLWASTV-LALLTIGLIYEWVQGGLDW 114
Cdd:MTH00055  89 LFGFWVMYLfLIILTIGLIYEWVKGGLEW 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 7-114 5.49e-27

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 95.96  E-value: 5.49e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   7 VIFIATALSLALAVLSFWLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLlpLPWGDQLTSPM 86
Cdd:COG0838   11 FLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRELG 88

                         90       100
                 ....*....|....*....|....*....
gi 533206275  87 LTFLWASTV-LALLTIGLIYEWVQGGLDW 114
Cdd:COG0838   89 WFGLIEMLVfIAILLVGLIYAWKKGALEW 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 1.05e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 95.44  E-value: 1.05e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   1 MNLVSTVIFIATALSLALAVLSFWLP-QMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLSfRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 533206275  80 DQLTSPMLTFLWASTVLALLTIGLIYEWVQGGLDWAE 116
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-115 1.08e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 90.30  E-value: 1.08e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   1 MNLVSTVIFIATALSLALAVLSFWLP-QMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVLAaRSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 533206275  80 DQLTSPMLTFLWASTVLALLTIGLIYEWVQGGLDWA 115
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 8-114 2.09e-24

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 89.35  E-value: 2.09e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   8 IFIATALSLALAVLSFWLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLTSPmL 87
Cdd:MTH00018   7 LIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAP-F 85

                         90       100
                 ....*....|....*....|....*..
gi 533206275  88 TFLWASTVLALLTIGLIYEWVQGGLDW 114
Cdd:MTH00018  86 GFWTMVGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 7-114 6.02e-19

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 75.74  E-value: 6.02e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   7 VIFIATALSLALAVLSFWLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLlpLPWGDQLTSPM 86
Cdd:MTH00030  16 VGIILLLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSIVFNQLN 93

                         90       100
                 ....*....|....*....|....*....
gi 533206275  87 LTFLW-ASTVLALLTIGLIYEWVQGGLDW 114
Cdd:MTH00030  94 LFSFWiVYTFLIVLAIGLAYEWIKGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 8-114 6.51e-11

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 55.06  E-value: 6.51e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   8 IFIATALSLALAVLSFWLPQM----NPDHEKLSPYECGFDPLGTARLP--FSLRFFLVAILFLLFDLEIALLLPlpWGDQ 81
Cdd:PRK07928   7 ILVLGALAAAFAVVSVVVASLvgpkRYNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVS 84

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 533206275  82 LTSpMLTFLWASTVLALLT--IGLIYEWVQGGLDW 114
Cdd:PRK07928  85 FDA-LGVFGLVEMALFMLTvfVAYAYVWRRGGLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 33-114 7.13e-11

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 54.99  E-value: 7.13e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275  33 EKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLlpLPWG---DQLTspMLTFLWASTVLALLTIGLIYEWVQ 109
Cdd:CHL00022  39 EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAmsfDVLG--VSAFIEALIFVLILIVGLVYAWRK 114


                 ....*
gi 533206275 110 GGLDW 114
Cdd:CHL00022 115 GALEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
2-114 6.16e-09

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 49.74  E-value: 6.16e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   2 NLVSTVIFIATALSLALAVLSF--WLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPlpWG 79
Cdd:PRK07756   8 SYMIVLIFLLLGILLPVVALTLgrMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WA 85

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 533206275  80 ---DQL----TSPMLTFLwastvlALLTIGLIYEWVQGGLDW 114
Cdd:PRK07756  86 vayDKLglfaLIEMLIFV------VMLLVGLAYAWKKKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
1-114 8.85e-09

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 49.67  E-value: 8.85e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   1 MNLVSTVIFIATalsLALA-VLSFWLPQMNPDHEKLSPYECGFDPLGTARlPFSLRFFLVAILFLLFDLEIALLLPLPWG 79
Cdd:PRK08489  16 LLVLTFVAFFLT---TRLArFISRKLAQKNTEKLKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFPWAVD 91

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 533206275  80 DQLTSpMLTFLWASTVLALLTIGLIYEWVQGGLDW 114
Cdd:PRK08489  92 FKLLG-LFGLIEMLLFIVLLTIGFIYAWKKGALEW 125
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 7-114 2.00e-08

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 48.35  E-value: 2.00e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   7 VIFIATALSLALAVLSFWLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDqLTSPM 86
Cdd:MTH00092   7 VFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVSD-FSSLI 85

                         90       100
                 ....*....|....*....|....*...
gi 533206275  87 LTFLWASTVLAlltiGLIYEWVQGGLDW 114
Cdd:MTH00092  86 SFFMLMIFIFF----GFYMEWWYGKLIW 109
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 36-77 2.50e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.57  E-value: 2.50e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 533206275  36 SPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLP 77
Cdd:MTH00060  39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
PRK06073 PRK06073
NADH dehydrogenase subunit A; Validated
 3-99 4.38e-03

NADH dehydrogenase subunit A; Validated


Pssm-ID: 235690  Cd Length: 124  Bit Score: 34.20  E-value: 4.38e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 533206275   3 LVSTVIFIATALSLALAVLsfwLPQMNPDHEKLSPYECGFDPLGTARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQL 82
Cdd:PRK06073  12 LVIVLGLAAGVGTYKLLKL---ILPSKPTPLKVSRYEAGNPPTGPAKLWLPMQYYGYLLLFLTLEPIVVLLLLIAFAPYY 88

                         90
                 ....*....|....*..
gi 533206275  83 TSPMLTFLWASTVLALL 99
Cdd:PRK06073  89 TFRDLLLLIVVALVLMY 105
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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