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Conserved domains on  [gi|295442690|ref|YP_003595299|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Thunnus maccoyii]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009581)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 1.18e-62

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 186.28  E-value: 1.18e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690   1 MSLVTTIITIAAALSAVLAVVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 295442690  81 QLPSPLSTFLWASTVLVLLTLGLIYEWLQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 1.18e-62

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 186.28  E-value: 1.18e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690   1 MSLVTTIITIAAALSAVLAVVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 295442690  81 QLPSPLSTFLWASTVLVLLTLGLIYEWLQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
23-113 4.90e-24

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 87.86  E-value: 4.90e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690   23 FWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLlpLPWGDQLPS-PLSTFLWASTVLVLLTL 101
Cdd:pfam00507   5 RLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRElGWFGFVEMLIFIAILLV 82

                          90
                  ....*....|..
gi 295442690  102 GLIYEWLQGGLE 113
Cdd:pfam00507  83 GLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 30-114 6.34e-18

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 72.85  E-value: 6.34e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690  30 PDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLlpLPWGDQLPS-PLSTFLWASTVLVLLTLGLIYEWL 108
Cdd:COG0838   34 PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRElGWFGLIEMLVFIAILLVGLIYAWK 111


                 ....*.
gi 295442690 109 QGGLEW 114
Cdd:COG0838  112 KGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 1.18e-62

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 186.28  E-value: 1.18e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690   1 MSLVTTIITIAAALSAVLAVVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 295442690  81 QLPSPLSTFLWASTVLVLLTLGLIYEWLQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-116 1.62e-48

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 150.53  E-value: 1.62e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690   3 LVTTIITIAAALSAVLAVVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQL 82
Cdd:MTH00069   1 LIMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQL 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 295442690  83 PSPLSTFLWASTVLVLLTLGLIYEWLQGGLEWAE 116
Cdd:MTH00069  81 NTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 3-115 2.54e-46

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 145.02  E-value: 2.54e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690   3 LVTTIITIAAALSAVLAVVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQL 82
Cdd:MTH00113   2 NLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAINL 81

                         90       100       110
                 ....*....|....*....|....*....|...
gi 295442690  83 PSPLSTFLWASTVLVLLTLGLIYEWLQGGLEWA 115
Cdd:MTH00113  82 TTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 23-116 4.59e-39

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 126.59  E-value: 4.59e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690  23 FWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLSTFLWASTVLVLLTLG 102
Cdd:MTH00106  22 FWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLNTMLTMALLLISLLALS 101

                         90
                 ....*....|....
gi 295442690 103 LIYEWLQGGLEWAE 116
Cdd:MTH00106 102 LAYEWTQKGLEWTE 115
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-114 8.34e-35

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 115.77  E-value: 8.34e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690   1 MSLVTTIITIAAALSAVLAVVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 295442690  81 QLPSPlsTFLWASTVLVLLTLGLIYEWLQGGLEW 114
Cdd:MTH00203  81 QLSSL--SLLLAFLFLILLTLGLIYEWLQGGLEW 112
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 2.88e-34

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 114.69  E-value: 2.88e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690   1 MSLVTTIITIAAALSAVLAVVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 295442690  81 QLPSPLSTFLWASTVLVLLTLGLIYEWLQGGLEWAE 116
Cdd:MTH00042  81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 31-114 1.14e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 92.53  E-value: 1.14e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690  31 DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLSTFLWASTVLVLLTLGLIYEWLQG 110
Cdd:MTH00161  30 DREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWLITSSFFILILLLGLYYEWNQG 109


                 ....
gi 295442690 111 GLEW 114
Cdd:MTH00161 110 ALEW 113
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
23-113 4.90e-24

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 87.86  E-value: 4.90e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690   23 FWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLlpLPWGDQLPS-PLSTFLWASTVLVLLTL 101
Cdd:pfam00507   5 RLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFL--FPWAVSFRElGWFGFVEMLIFIAILLV 82

                          90
                  ....*....|..
gi 295442690  102 GLIYEWLQGGLE 113
Cdd:pfam00507  83 GLVYAWKKGALE 94
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 31-116 5.07e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 86.06  E-value: 5.07e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690  31 DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLSTFLWASTVLVLLTLGLIYEWLQG 110
Cdd:MTH00148  32 DREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSLGSSFSVWSLTSLFIFLLILILGLFHEWNEG 111


                 ....*.
gi 295442690 111 GLEWAE 116
Cdd:MTH00148 112 SLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 31-116 4.53e-22

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 83.50  E-value: 4.53e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690  31 DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLSTFLWASTVLVLLTLGLIYEWLQG 110
Cdd:MTH00202  32 DREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKSSWSKGGLLGGTIFLLILIGGLIHEWKEG 111


                 ....*.
gi 295442690 111 GLEWAE 116
Cdd:MTH00202 112 SLDWVK 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 30-114 1.56e-19

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 77.06  E-value: 1.56e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690  30 PDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLlpLPWGDQLPSPLSTFLWASTVLVLLTLG-LIYEWL 108
Cdd:MTH00055  34 PDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFL--FPWCVVYNQIGLFGFWVMYLFLIILTIgLIYEWV 111


                 ....*.
gi 295442690 109 QGGLEW 114
Cdd:MTH00055 112 KGGLEW 117
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 29-115 2.44e-19

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 76.82  E-value: 2.44e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690  29 TPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLSTFLWASTVLVLLTLGLIYEWL 108
Cdd:MTH00012  30 TADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILFLLILVIGLIHEWR 109


                 ....*..
gi 295442690 109 QGGLEWA 115
Cdd:MTH00012 110 EGSLDWS 116
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 23-114 1.05e-18

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 74.71  E-value: 1.05e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690  23 FWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLPSPLSTFLWAsTVLVLLTLG 102
Cdd:MTH00018  22 YFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFGFWTMV-GFLFILTLG 100

                         90
                 ....*....|..
gi 295442690 103 LIYEWLQGGLEW 114
Cdd:MTH00018 101 LIYEWIKGGLEW 112
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 30-115 1.07e-18

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 74.90  E-value: 1.07e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690  30 PDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLlpLPWGDQLP-SPLSTFLWASTVLVLLTLGLIYEWL 108
Cdd:PRK06602  37 PDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFL--FPWAVSFReIGWLGFVEAMIFILVLLVGLVYLWR 114


                 ....*..
gi 295442690 109 QGGLEWA 115
Cdd:PRK06602 115 KGALDWE 121
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 30-114 6.34e-18

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 72.85  E-value: 6.34e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690  30 PDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLlpLPWGDQLPS-PLSTFLWASTVLVLLTLGLIYEWL 108
Cdd:COG0838   34 PNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFL--FPWAVVFRElGWFGLIEMLVFIAILLVGLIYAWK 111


                 ....*.
gi 295442690 109 QGGLEW 114
Cdd:COG0838  112 KGALEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 30-114 9.42e-15

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 64.95  E-value: 9.42e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690  30 PDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLlpLPWG---DQLpsPLSTFLWASTVLVLLTLGLIYE 106
Cdd:MTH00030  39 PDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFL--FPWSivfNQL--NLFSFWIVYTFLIVLAIGLAYE 114


                 ....*...
gi 295442690 107 WLQGGLEW 114
Cdd:MTH00030 115 WIKGGLEW 122
ndhC CHL00022
NADH dehydrogenase subunit 3
 33-114 1.16e-08

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 49.22  E-value: 1.16e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690  33 EKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLlpLPWG---DQLpsPLSTFLWASTVLVLLTLGLIYEWLQ 109
Cdd:CHL00022  39 EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAmsfDVL--GVSAFIEALIFVLILIVGLVYAWRK 114


                 ....*
gi 295442690 110 GGLEW 114
Cdd:CHL00022 115 GALEW 119
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 34-114 2.97e-08

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 48.13  E-value: 2.97e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690  34 KLSPYECGFDPLGSARLP--FSLRFFLVAILFLLFDLEIALLLPlpWGDQLPSpLSTFLWASTVLVLLTLGL--IYEWLQ 109
Cdd:PRK07928  37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFDA-LGVFGLVEMALFMLTVFVayAYVWRR 113


                 ....*
gi 295442690 110 GGLEW 114
Cdd:PRK07928 114 GGLEW 118
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 34-74 6.79e-06

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 41.80  E-value: 6.79e-06
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 295442690  34 KLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLL 74
Cdd:MTH00092  34 KVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
24-114 3.71e-05

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 40.11  E-value: 3.71e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690  24 WLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPlpWG---DQLPspLSTFLWASTVLVLLT 100
Cdd:PRK07756  32 MLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYP--WAvayDKLG--LFALIEMLIFVVMLL 107

                         90
                 ....*....|....
gi 295442690 101 LGLIYEWLQGGLEW 114
Cdd:PRK07756 108 VGLAYAWKKKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
34-114 4.27e-05

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 40.04  E-value: 4.27e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295442690  34 KLSPYECGFDPLGSARlPFSLRFFLVAILFLLFDLEIALLLPLPWGDQLpspLSTFLWASTVLVLLTLG--LIYEWLQGG 111
Cdd:PRK08489  47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFPWAVDFKL---LGLFGLIEMLLFIVLLTigFIYAWKKGA 122


                 ...
gi 295442690 112 LEW 114
Cdd:PRK08489 123 LEW 125
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 36-77 6.82e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 39.11  E-value: 6.82e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 295442690  36 SPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLP 77
Cdd:MTH00060  39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
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