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Conserved domains on  [gi|229317942|ref|YP_002860162|]
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ATP synthase F0 subunit 6 (mitochondrion) [Davidius lunatus]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 1.43e-109

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 313.64  E-value: 1.43e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942   1 MMTNLFSVFDPSSSiFNSSVNWISTMLGMLILPSAFWLIPTRLSTTFTLINSTLHKEFKTLLGeTSMKGSTFIFISVFTM 80
Cdd:MTH00157   1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLG-PKNKGSTLIFISLFSF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  81 IMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAV 160
Cdd:MTH00157  79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 229317942 161 RLAANMIAGHLLMTLLGNTGPSLTYSILSLLLMTQIALLMLESAVAMIQSYVFAVLSTLYSSEVN 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 1.43e-109

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 313.64  E-value: 1.43e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942   1 MMTNLFSVFDPSSSiFNSSVNWISTMLGMLILPSAFWLIPTRLSTTFTLINSTLHKEFKTLLGeTSMKGSTFIFISVFTM 80
Cdd:MTH00157   1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLG-PKNKGSTLIFISLFSF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  81 IMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAV 160
Cdd:MTH00157  79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 229317942 161 RLAANMIAGHLLMTLLGNTGPSLTYSILSLLLMTQIALLMLESAVAMIQSYVFAVLSTLYSSEVN 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-225 2.21e-53

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 171.24  E-value: 2.21e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942    5 LFSVFDPSS-SIFNSSVNWISTMLGMLIL----PSAFWLIPTRLSTTFTLINSTLHKEFKTLLGETSMKGSTFIFiSVFT 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFlissSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942   80 MIMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 229317942  160 VRLAANMIAGHLLMTLLGNTGPSLT-YSILSLLLMTQIALLMLESAVAMIQSYVFAVLSTLYSSEVN 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMsSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 68-222 3.31e-46

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 150.24  E-value: 3.31e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  68 KGSTFIFISVFTMIMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIE 147
Cdd:cd00310    2 KKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIE 81

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 229317942 148 TISNVIRPGTLAVRLAANMIAGHLLMTLLGNTGPSLTYSILSLLLMTQIALLMLESAVAMIQSYVFAVLSTLYSS 222
Cdd:cd00310   82 LISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
22-222 2.74e-31

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 114.12  E-value: 2.74e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942   22 WISTMLGMLILPSAFW----LIPTRLSTTFTLINSTLHKEFKTLLGETSMKGSTFIFISVFTMIMFNNVMGLF---PYIF 94
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942   95 TSSSHLAFTLTLALPLWLSFMIYGWINH-TQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLAANMIAGHLLM 173
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 229317942  174 TLLGNTGPSLTYSILSLLLMT---QIALLMLESAVAMIQSYVFAVLSTLYSS 222
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIPpllGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 21-220 4.11e-27

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 102.84  E-value: 4.11e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  21 NWISTMLGMLILPSAFW-------LIPTRLSTTFTLINSTLHKEFKTLLGETSMKGSTFIFiSVFTMIMFNNVMGLFPYI 93
Cdd:COG0356    2 TVLMSWLAMLLLLLLFLlatrklkLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLL-TLFLFILVSNLLGLIPGL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  94 FTSSSHLAFTLTLALPLWLSFMIYGWINH-TQHMFAHLVPQGTPPvLMPFMVCIETISNVIRPGTLAVRLAANMIAGHLL 172
Cdd:COG0356   81 FPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISELARPLSLSLRLFGNMFAGHII 159

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 229317942 173 MTLLGNTGPSLTYSILSLLLmtQIALLMLESAVAMIQSYVFAVLSTLY 220
Cdd:COG0356  160 LLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 1.43e-109

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 313.64  E-value: 1.43e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942   1 MMTNLFSVFDPSSSiFNSSVNWISTMLGMLILPSAFWLIPTRLSTTFTLINSTLHKEFKTLLGeTSMKGSTFIFISVFTM 80
Cdd:MTH00157   1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLG-PKNKGSTLIFISLFSF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  81 IMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAV 160
Cdd:MTH00157  79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 229317942 161 RLAANMIAGHLLMTLLGNTGPSLTYSILSLLLMTQIALLMLESAVAMIQSYVFAVLSTLYSSEVN 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-224 6.50e-57

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 180.23  E-value: 6.50e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942   1 MMTNLFSVFDPSSSIFNSSV--NWISTMLGMLILPSAFWLIPTRLSTTFtLINSTLHKEFKTLLGETSMKGSTFIFISVF 78
Cdd:MTH00176   1 MLVDLFSSFDPPNKNIFSMIslSWITLLLFLLLMPSSVWFCPSKLQVFM-LMFSTFLPEMILRSNGSYILGSASIIISLF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  79 TMIMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTL 158
Cdd:MTH00176  80 ILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 229317942 159 AVRLAANMIAGHLLMTLLGNTGPSLT---YSILSLLLMTQIALLMLESAVAMIQSYVFAVLSTLYSSEV 224
Cdd:MTH00176 160 AVRLAANLSAGHLLLGLLGAAMWGLLpvsPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEH 228
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-225 2.21e-53

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 171.24  E-value: 2.21e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942    5 LFSVFDPSS-SIFNSSVNWISTMLGMLIL----PSAFWLIPTRLSTTFTLINSTLHKEFKTLLGETSMKGSTFIFiSVFT 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFlissSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIF-TLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942   80 MIMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 229317942  160 VRLAANMIAGHLLMTLLGNTGPSLT-YSILSLLLMTQIALLMLESAVAMIQSYVFAVLSTLYSSEVN 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMsSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-223 2.31e-48

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 158.36  E-value: 2.31e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942   1 MMTNLFSVFDPSSSIFN----SSVNWISTMLGMLILPSAFWLIPTRLSTTFTLINSTLHKEFKTLLGeTSMKGSTFIFIS 76
Cdd:MTH00005   1 MLTDIFSSFDPATNSLFnnlsSTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFG-KHLKGFSSLISA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  77 VFTMIMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPG 156
Cdd:MTH00005  80 LFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942 157 TLAVRLAANMIAGHLLMTLLGN-TGPSLTYSILS--LLLMTQIALLMLESAVAMIQSYVFAVLSTLYSSE 223
Cdd:MTH00005 160 TLSFRLAANMSAGHIVLSLIGIyAASALFSSISStiLLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 68-222 3.31e-46

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 150.24  E-value: 3.31e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  68 KGSTFIFISVFTMIMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIE 147
Cdd:cd00310    2 KKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIE 81

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 229317942 148 TISNVIRPGTLAVRLAANMIAGHLLMTLLGNTGPSLTYSILSLLLMTQIALLMLESAVAMIQSYVFAVLSTLYSS 222
Cdd:cd00310   82 LISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-223 1.35e-41

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 141.16  E-value: 1.35e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942   1 MMTNLFSVFDPSSSIFNS--SVNWISTMLGMLILPSAFWLIPTRLSTTFTLINSTLHKEFKTLLGeTSMKGSTFIFISVF 78
Cdd:MTH00173   1 MMVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSG-LNLGGFSLLLSSLF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  79 TMIMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTL 158
Cdd:MTH00173  80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 229317942 159 AVRLAANMIAGHLLMTLLGNTGPSLTYS----ILSLLLMTQIALLMLESAVAMIQSYVFAVLSTLYSSE 223
Cdd:MTH00173 160 TVRLLANISAGHIVLTLIGNYLSSSLFSssvvSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-223 1.21e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 133.15  E-value: 1.21e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942   1 MMTNLFSVFDpSSSIFNSSVNWISTMLGMLILPS-AFWLIPTRLSTTFTLINSTLHKEFKTLLGETSMKGStFIFISVFT 79
Cdd:MTH00179   1 MMLSMFDQFE-SPSLLGIPLLALALLLPWLLFPSlTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWA-VLFLSLML 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  80 MIMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLA 159
Cdd:MTH00179  79 FLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALG 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 229317942 160 VRLAANMIAGHLLMTLLGNTGPSLTYSILSLLLMTQ---IALLMLESAVAMIQSYVFAVLSTLYSSE 223
Cdd:MTH00179 159 VRLTANITAGHLLMHLISSAVFVLMNFMGMVALLTLlvlFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-223 5.01e-38

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 131.63  E-value: 5.01e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942   3 TNLFSVFDPSSSIFNSSvnwisTMLGMLILPSAFWLI------PTRLSTTFTLINSTLhkeFKTLLGETSMKGSTFI--F 74
Cdd:MTH00035   5 NSIFGQFSPDTILFIPL-----TLLSSVIALSWLFFInptnwlPSRSQSIWLTFRQEI---LKLIFQNTNPNTAPWAglL 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  75 ISVFTMIMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIR 154
Cdd:MTH00035  77 TTVFILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQ 156

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 229317942 155 PGTLAVRLAANMIAGHLLMTLLGNT----GPSLTYSILSLLLMtqIALLMLESAVAMIQSYVFAVLSTLYSSE 223
Cdd:MTH00035 157 PIALGLRLAANLTAGHLLIFLLSTAiwelSNSPLISIITLIIF--FLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-223 5.62e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 131.49  E-value: 5.62e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942   1 MMTNLFSVFDPSSSIFnssvnwISTMLGMLILPSAFWLIPT-RLST--TFTLINSTLHKEFKTLLGETSMKGS--TFIFI 75
Cdd:MTH00120   1 MNLNFFDQFSSPELLG------IPLILLAMLIPALLIPSPKnRLLTnrLTTLQLWLIKLITKQLMLPLNKKGHkwALILT 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  76 SVFTMIMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRP 155
Cdd:MTH00120  75 SLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRP 154

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 229317942 156 GTLAVRLAANMIAGHLLMTLLGNTGPSLTYSILSLLLMTQIALL---MLESAVAMIQSYVFAVLSTLYSSE 223
Cdd:MTH00120 155 LALGVRLTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLlltILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-220 4.42e-34

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 121.60  E-value: 4.42e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942   1 MMTNLFSVFDpSSSIFNSSVNWISTMLGMLILPSAFWLIPTRLSTTFT-LINSTLhkefKTLLGETSMKGSTF--IFISV 77
Cdd:MTH00101   1 MNENLFASFI-TPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQwLIQLTS----KQMMTIHNTKGQTWslMLMSL 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  78 FTMIMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGT 157
Cdd:MTH00101  76 ILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMA 155

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 229317942 158 LAVRLAANMIAGHLLMTLLGNTGPSLTYSILSLLLMTQIALL---MLESAVAMIQSYVFAVLSTLY 220
Cdd:MTH00101 156 LAVRLTANITAGHLLIHLIGGATLALMSISTTTALITFIILIlltILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 73-223 8.00e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 120.75  E-value: 8.00e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  73 IFISVFTMIMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNV 152
Cdd:MTH00132  72 LLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLF 151

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 229317942 153 IRPGTLAVRLAANMIAGHLLMTLLGNTGPSLTYSILSLLLMTQIALLM---LESAVAMIQSYVFAVLSTLYSSE 223
Cdd:MTH00132 152 IRPLALGVRLTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLltlLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-223 2.90e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 116.99  E-value: 2.90e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942   1 MMTNLFSVFdPSSSIFNSSVNWISTMLGMLILPSAF--WLiPTRLSTTFTLInstLHKEFKTLLGETSMKGS--TFIFIS 76
Cdd:MTH00073   1 MNLSFFDQF-LSPTLLGIPLIMLAMLLPWLLFPTPTnkWL-NNRLSTLQIWF---LQNFTKQLMLPLNTPGHkwALILTS 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  77 VFTMIMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPG 156
Cdd:MTH00073  76 LMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPL 155

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942 157 TLAVRLAANMIAGHLLMTLLGNTGPSLTYSILSLLLMTQIALL---MLESAVAMIQSYVFAVLSTLYSSE 223
Cdd:MTH00073 156 ALGVRLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFlltLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 15-220 2.60e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 114.37  E-value: 2.60e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  15 IFNSSVNWISTMLGMLILPSAFWLIPTRLSTTFTLINSTLHKEFKTLLGETSMKGSTFIfISVFTMIMFNNVMGLFPYIF 94
Cdd:MTH00172  17 LTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFI-ISLFFFIVFLNLLGLFPYVF 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  95 TSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLAANMIAGHLLMT 174
Cdd:MTH00172  96 TPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFA 175

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 229317942 175 LLGNTG-----PSLTYSILSLLLMTQIALlmLESAVAMIQSYVFAVLSTLY 220
Cdd:MTH00172 176 ILAGFGfnmlcASGFLSLFPLLIMVFITL--LEIAVAVIQAYVFCLLTTIY 224
ATP-synt_A pfam00119
ATP synthase A chain;
22-222 2.74e-31

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 114.12  E-value: 2.74e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942   22 WISTMLGMLILPSAFW----LIPTRLSTTFTLINSTLHKEFKTLLGETSMKGSTFIFISVFTMIMFNNVMGLF---PYIF 94
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942   95 TSSSHLAFTLTLALPLWLSFMIYGWINH-TQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLAANMIAGHLLM 173
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 229317942  174 TLLGNTGPSLTYSILSLLLMT---QIALLMLESAVAMIQSYVFAVLSTLYSS 222
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIPpllGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 21-220 4.11e-27

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 102.84  E-value: 4.11e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  21 NWISTMLGMLILPSAFW-------LIPTRLSTTFTLINSTLHKEFKTLLGETSMKGSTFIFiSVFTMIMFNNVMGLFPYI 93
Cdd:COG0356    2 TVLMSWLAMLLLLLLFLlatrklkLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLL-TLFLFILVSNLLGLIPGL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  94 FTSSSHLAFTLTLALPLWLSFMIYGWINH-TQHMFAHLVPQGTPPvLMPFMVCIETISNVIRPGTLAVRLAANMIAGHLL 172
Cdd:COG0356   81 FPPTADINVTLALALIVFVLVHYYGIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISELARPLSLSLRLFGNMFAGHII 159

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 229317942 173 MTLLGNTGPSLTYSILSLLLmtQIALLMLESAVAMIQSYVFAVLSTLY 220
Cdd:COG0356  160 LLLLAGLAPFLLLGVLSLLL--PVAWTAFELLVGFLQAYIFTMLTAVY 205
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 17-220 7.96e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 103.16  E-value: 7.96e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  17 NSSVNWISTMLGMLILPSAFWLIPTRLSTTFTLINSTLHKEFKTLLGETSMKGSTFIFiSVFTMIMFNNVMGLFPYIFTS 96
Cdd:MTH00175  30 NSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQKYFPFIL-SLFLFIAILNILGLFPYVFTP 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  97 SSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLAANMIAGHLLMTLL 176
Cdd:MTH00175 109 TAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAIL 188

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 229317942 177 GN------TGPSLTYSILSLLLMTQIALlmLESAVAMIQSYVFAVLSTLY 220
Cdd:MTH00175 189 SGfafnmlSNGLIILSLFPMLIMIFITL--LEMAVAVIQAYVFCLLTTIY 236
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 73-220 2.23e-20

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 85.62  E-value: 2.23e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  73 IFISVFTMIMFNNVMGLFP-YIFTSSSHLAFTLTLALPLWLSFMIYG-WINHTQHMFAHLVPQgtppvLMPFMVCIETIS 150
Cdd:PRK05815  75 LAFTLFLFILLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQ-----PHPLLLPIEIIS 149

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942 151 NVIRPGTLAVRLAANMIAGHLLMTLLGNTGPSLTYSILSLLLMTqIALLMLESAVAMIQSYVFAVLSTLY 220
Cdd:PRK05815 150 EFSRPISLSLRLFGNMLAGELILALIALLGGAGLLLALAPLILP-VAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 38-220 1.46e-19

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 84.22  E-value: 1.46e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  38 LIPTRLSTTFTLINSTLHKEFKTLLGETSMKGSTFIfISVFTMIMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIY 117
Cdd:MTH00174  59 LVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFV-LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLA 137

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942 118 GWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLAANMIAGHLLMTLLGNTGPSLTYSILSLLLMTQIA 197
Cdd:MTH00174 138 GLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIGSFVPFA 217

                        170       180
                 ....*....|....*....|....*..
gi 229317942 198 LL----MLESAVAMIQSYVFAVLSTLY 220
Cdd:MTH00174 218 ILifvtILEMAVAIIQAYVFTLLTIVY 244
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 75-220 5.60e-13

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 66.69  E-value: 5.60e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  75 ISVFTMIMFNNVMGLFPYIFTSSSHLAFTLTLALplwLSFMIYGWINHTQH----MFAHLVpQGTPPVLMPFMVCIETIS 150
Cdd:PRK13419 175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAV---FTFFITQYAAIKAHgikgYLAHLT-GGTHWSLWIIMIPIEFIG 250

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942 151 NVIRPGTLAVRLAANMIAGHL-LMTLLGntgpsltysiLSLLLMTQIA-----------LLMLESAVAMIQSYVFAVLST 218
Cdd:PRK13419 251 LFTKPFALTVRLFANMTAGHIvILSLIF----------ISFILKSYIVavavsvpfaifIYLLELFVAFLQAYIFTMLSA 320


                 ..
gi 229317942 219 LY 220
Cdd:PRK13419 321 LF 322
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 95-220 9.85e-09

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 54.51  E-value: 9.85e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  95 TSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETI-SNVIRPGTLAVRLAANMIAGH-LL 172
Cdd:PRK13417 217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHvII 296

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 229317942 173 MTLLGNTGPSLTYSILSLLLMTQIALLMLESAVAMIQSYVFAVLSTLY 220
Cdd:PRK13417 297 LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 70-223 1.23e-08

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 53.06  E-value: 1.23e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  70 STFIFISVFTMIMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIYGWINhtQHMFAHLVPQGTPPVLMPF-MVCIET 148
Cdd:MTH00087  51 SSVISFFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSK--SEKFSVYLSKGSDSFLKTFsMLFVEI 128

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 229317942 149 ISNVIRPGTLAVRLAANMIAGHLLMTLLGNTGpsLTYSILSLLlmtqiaLLMLESAVAMIQSYVFAVLSTLYSSE 223
Cdd:MTH00087 129 VSELSRPLALTLRLTVNLMVGHLISSLLNFLG--EKYVWLSIL------AIMMECFVAFIQSYIFSRLIYLYLNE 195
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 90-178 3.66e-05

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 42.56  E-value: 3.66e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  90 FPYIFTSSSHLAFTLTLALPLWLSFMIYGWINHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLAANMIAG 169
Cdd:MTH00050  42 LPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLG 121


                 ....*....
gi 229317942 170 HLLMTLLGN 178
Cdd:MTH00050 122 CFGGVALGN 130
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 81-220 4.20e-04

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 40.11  E-value: 4.20e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  81 IMFNNVMGLFPYIFTSSSHLAFTLTLALPLWLSFMIYG-----WINHTQHmfaHLVPQgtpPVLMPFMVcietISNVIRP 155
Cdd:PRK13420  85 ILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHWFGiraegLREYLKH---YLSPS---PFLLPFHL----ISEITRT 154

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 229317942 156 GTLAVRLAANMIAGHLLMTLLgntgpsltysILSLLLMTQIALLMLESAVAMIQSYVFAVLSTLY 220
Cdd:PRK13420 155 LALAVRLFGNIMSLELAALLV----------LLVAGFLVPVPILMLHIIEALVQAYIFGMLALIY 209
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 27-220 2.47e-03

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 37.75  E-value: 2.47e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942  27 LGMLILPSAFWLIPTRLSTTFTLINSTLHKEFK-TLLGET----SMKGSTFIFISVftmimfNNVMGLFPYIFTSSSHLA 101
Cdd:PRK13421  35 AGSALATRRLSLAPGRLQSVLELVVTTIDAQIRdTMQTDPapyrALIGTLFLFVLV------ANWSSLVPGVEPPTAHLE 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 229317942 102 FTLTLALPLWLSFMIYGWinHTQHMFAHLVPQGTPPVLMPFMVCIETISnviRPGTLAVRLAANMIAGHLLMTLlgntgp 181
Cdd:PRK13421 109 TDAALALIVFLATIYYGV--RARGVRGYLATFAEPTWVMIPLNLVEQLT---RTFSLIVRLFGNVMSGVFVIGI------ 177

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 229317942 182 sltysILSLL-LMTQIALLMLESAVAMIQSYVFAVLSTLY 220
Cdd:PRK13421 178 -----VLSLAgLLVPIPLMALDLLTGAVQAYIFAVLAMVF 212
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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