|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 662.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 1 MLKILIPTLLMIPTAWLVPRKWLWPSSLLHSLMIATISLTWLKNISETGWSSLNLYLATDGLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 81 SQNHLTTEPLNRQRMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLILITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 161 LLVALLLLQNTAGTLSLLTLQHTPSMCPNTWANKFWWIGCMLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 241 GYGMMRMLTVLDPLTKELSYPFIVLALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 321 GLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLFSWSWWTLALTGAG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 221145599 401 TLITAGYSLYMFLMTQRGQLPSHIFSIEPTHSREHLLIALHLLPLLLLILKPELVWGWT 459
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-433 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 636.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 1 MLKILIPTLLMIPTAWLVPRKWLWPSSLLHSLMIATISLTWLKNISETGwSSLNLYLATDGLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPT-KNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 81 SQNHLTTEPLNRQRMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLILITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 161 LLVALLLLQNTAGTLSLLTLQHTPSMCPNTWANKFWWIGCMLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 241 GYGMMRMLTVLDPLTKELSYPFIVLALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 321 GLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLFSWSWWTLALTGAG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430
....*....|....*....|....*....|...
gi 221145599 401 TLITAGYSLYMFLMTQRGQLPSHIFSIEPTHSR 433
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTR 432
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-433 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 635.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 1 MLKILIPTLLMIPTAWLVPRKWLWPSSLLHSLMIATISLTWLKNISETgWSSLNLYLATDGLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSET-MNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 81 SQNHLTTEPLNRQRMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLILITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 161 LLVALLLLQNTAGTLSLLTLQHTPSMCPNTWANKFWWIGCMLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 241 GYGMMRMLTVLDPLTKELSYPFIVLALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 321 GLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLFSWSWWTLALTGAG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430
....*....|....*....|....*....|...
gi 221145599 401 TLITAGYSLYMFLMTQRGQLPSHIFSIEPTHSR 433
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTR 432
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-433 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 624.61 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 1 MLKILIPTLLMIPTAWLVPRKWLWPSSLLHSLMIATISLTWLKNISETGWSsLNLYLATDGLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLN-FSLLFFSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 81 SQNHLTTEPLNRQRMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLILITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 161 LLVALLLLQNTAGTLSLLTLQHTPSMCPNTWANKFWWIGCMLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 241 GYGMMRMLTVLDPLTKELSYPFIVLALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00110 240 GYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 321 GLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLFSWSWWTLALTGAG 400
Cdd:MTH00110 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLN 399
|
410 420 430
....*....|....*....|....*....|...
gi 221145599 401 TLITAGYSLYMFLMTQRGQLPSHIFSIEPTHSR 433
Cdd:MTH00110 400 MLITALYSLYMLITTQRGKLTHHINNIKPSFTR 432
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-433 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 524.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 3 KILIPTLLMIPTAWLVPRKWLWPSSLLHSLMIATISLTWLKNISETGWSSLNLYLATDGLSTPLLVLTCWLLPLMILASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 83 NHLTTEPLNRQRMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLILITRWGNQTERLNAGTYFLFYTLAGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 163 VALLLLQNTAGTLSLLTLQHTPSMcpnTWANKFWWIGCMLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSKLT---TWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 243 GMMRMLTVLDPLTKELSYPFIVLALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 323 TSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLFSWSWWTLALTGAGTL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430
....*....|....*....|....*....|.
gi 221145599 403 ITAGYSLYMFLMTQRGQLPSHIFSIEPTHSR 433
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTR 428
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-433 |
1.72e-164 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 471.77 E-value: 1.72e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 1 MLKILIPTLLMIPTAWLVPRKWLWPSSLLHSLMIATISLTWLKNISETGWSSLNLYLATDGLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 81 SQNHLTTEPLNRQRMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLILITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 161 LLVALLLLQNTAGTLSLLTLQHTPSMCPNTWANKFWWIGCMLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 241 GYGMMRMLTVLD-PLTKELSYPFIVLALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIA 319
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 320 HGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLFSWSWWTLALTGA 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430
....*....|....*....|....*....|....
gi 221145599 400 GTLITAGYSLYMFLMTQRGQLPSHIFSIEPTHSR 433
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSR 434
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-433 |
4.10e-124 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 368.33 E-value: 4.10e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 1 MLKILIPTLLMIPTAWLVPRKWLwpsslLHSLMIATISLTWLKNISETGWSSLNLYLATDGLSTPLLVLTCWLLPLMILA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWL-----VQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 81 SQNHLTTepLNRQRMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLILITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00163 76 SESVYKK--NNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 161 LLVALLLLQNTAGTLSLltlqhtPSMCPNTWANKFWWIGCMLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLG 240
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSF------FLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 241 GYGMMRMLTVLDPLTKELSYPFIVLALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 321 GLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLFSWSWWTLALTGAG 400
Cdd:MTH00163 308 GLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLL 387
|
410 420 430
....*....|....*....|....*....|...
gi 221145599 401 TLITAGYSLYMFLMTQRGQLPSHIFSIEPTHSR 433
Cdd:MTH00163 388 SFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVR 420
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
49-429 |
9.04e-124 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 366.47 E-value: 9.04e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 49 GWSSLNLYLATDGLSTPLLVLTCWLLPLMILASQNHLTTepLNRQRMYISLLTSLQFFLILAFGATEILMFYVMFEATLI 128
Cdd:MTH00150 12 SYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKL--RNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLI 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 129 PTLILITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTAGTLSLLTLQHTPSMCPNTWankFWWIGCMLAFLVKM 208
Cdd:MTH00150 90 PTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFLAFLVKL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 209 PLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPLTKELSYPFIVLALWGVIMTGSICLRQTDLKSLIA 288
Cdd:MTH00150 167 PMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 289 YSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANL 368
Cdd:MTH00150 247 YSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINM 326
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 221145599 369 ALPPLPNLMGELMIITSLFSWSWWTLALTGAGTLITAGYSLYMFLMTQRGQLPSHIFSIEP 429
Cdd:MTH00150 327 AAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNE 387
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
25-426 |
7.13e-115 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 344.66 E-value: 7.13e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 25 PSSLLHSLMIATISLTWLKNISETGWSSLNLYLATDGLSTPLLVLTCWLLPLMILASQNHLTTEplNRQRMYISLLTSLQ 104
Cdd:MTH00205 21 WSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSN--KNSKLFTVSVIMLL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 105 FFLILAFGATEILMFYVMFEATLIPTLILITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTAGTLSLLTLQhtp 184
Cdd:MTH00205 99 LILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNF--- 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 185 SMCPNTWANKFWWIGCMLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPLTKELSYPFIV 264
Cdd:MTH00205 176 PLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFS 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 265 LALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLL 344
Cdd:MTH00205 256 ISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSML 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 345 LARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLFSWSWWTLALTGAGTLITAGYSLYMFLMTQRGQLPSHI 424
Cdd:MTH00205 336 MNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQI 415
|
..
gi 221145599 425 FS 426
Cdd:MTH00205 416 SS 417
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-422 |
7.71e-115 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 344.80 E-value: 7.71e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 1 MLKILIPT--LLMIPtawLVPRKWLWPSSLLHSLMIATISLTWLKNISeTGWSSLNLYLATDGLSTPLLVLTCWLLPLMI 78
Cdd:MTH00014 1 MLKLIMPLisLLLLP---LIKYPWSWALTFSTLLLLSLFTLLNLYPMS-APYSMFTESLSSDMLSAPLITLTLWITALMI 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 79 LASQNHLTTEplNRQRMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLILITRWGNQTERLNAGTYFLFYTLAGS 158
Cdd:MTH00014 77 LASFKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTAS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 159 LPLLVALLLLQNTAGTLSLLTLQHTPSMCpntWANKFWWIGCMLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLK 238
Cdd:MTH00014 155 LPLLMSILLIFYTNNSLSMLMSSMEPPSI---YLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLK 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 239 LGGYGMMRMLTVLDPLTKELSYPFIVLALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMI 318
Cdd:MTH00014 232 LGGYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMI 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 319 AHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLFSWSWWTLALTG 398
Cdd:MTH00014 312 AHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLA 391
|
410 420
....*....|....*....|....
gi 221145599 399 AGTLITAGYSLYMFLMTQRGQLPS 422
Cdd:MTH00014 392 ITSFLAAAYSLFLYTSTQHGSPPS 415
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
53-412 |
6.27e-84 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 266.18 E-value: 6.27e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 53 LNLYLATDGLSTPLLVLTCWLLPLMILASQNHLTteplNRQRMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLI 132
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILASWNEIK----KRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYF 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 133 LITRWGNQtERLNAGTYFLFYTLAGSLPLLV--ALLLLQNTAGTLSLLTLQHTPsmCPNTWAnKFWWIGCMLAFLVKMPL 210
Cdd:COG1008 150 LIGIWGGE-RRIYAAIKFFLYTLAGSLLMLVaiLALYFLAGALTFDIAELAAAP--LPLTAQ-LLLFLAFFIAFAVKVPM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 211 YGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPL-TKELSYPFIVLALWGVIMTGSICLRQTDLKSLIAY 289
Cdd:COG1008 226 FPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAY 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 290 SSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLA 369
Cdd:COG1008 306 SSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLG 385
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 221145599 370 LPPLPNLMGELMIITSLFSWSWWTLALTGAGTLITAGYSLYMF 412
Cdd:COG1008 386 LPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
53-413 |
4.01e-79 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 254.36 E-value: 4.01e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 53 LNLYLATDGLSTPLLVLTCWLLPLMILASQNHLTteplNRQRMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLI 132
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWEEIK----KRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYF 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 133 LITRWGnQTERLNAGTYFLFYTLAGSLPL----LVALLLLQNTAGTLSLLTLQHTPSmcpNTWANKFWWIGCMLAFLVKM 208
Cdd:PRK05846 150 LIGVWG-GKNRIYAATKFFLYTLLGSLLMlvaiIYLVVVYYNATGTFDIADLLNLPL---PPGVQYWLFLAFFIAFAVKM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 209 PLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPL-TKELSYPFIVLALWGVIMTGSICLRQTDLKSLI 287
Cdd:PRK05846 226 PMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 288 AYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLAN 367
Cdd:PRK05846 306 AYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 221145599 368 LALPPLPNLMGELMIITSLFSWSWWTLALTGAGTLITAGYSLYMFL 413
Cdd:PRK05846 386 LGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQ 431
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
53-412 |
1.30e-76 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 247.16 E-value: 1.30e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 53 LNLYLATDGLSTPLLVLTCWLLPLMILASQNHLTteplNRQRMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLI 132
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASWESIQ----KRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 133 LITRWGNQTeRLNAGTYFLFYTLAGSLPLLVALLLLQ-NTAGTLSLLTLQHTPSmcpNTWANKFWWIGCMLAFLVKMPLY 211
Cdd:TIGR01972 145 LIGVWGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLYfLGGGTFDLLELLNLPL---PFGVQTWLFLAFFIAFAVKVPLF 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 212 GAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDP-LTKELSYPFIVLALWGVIMTGSICLRQTDLKSLIAYS 290
Cdd:TIGR01972 221 PLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYS 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 291 SVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLAL 370
Cdd:TIGR01972 301 SISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGL 380
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 221145599 371 PPLPNLMGELMIITSLFSWSWWTLALTGAGTLITAGYSLYMF 412
Cdd:TIGR01972 381 PGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
54-412 |
1.95e-75 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 244.20 E-value: 1.95e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 54 NLYLATDGLSTPLLVLTCWLLPLMILASQN---HLTTEplnrqrmYISLLTSLQFFLILAFGATEILMFYVMFEATLIPT 130
Cdd:MTH00204 76 PLVFAVDGVSLFFILLTTLLIPICILISWKsikFLFKE-------FLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 131 LILITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTAGTLSLLTLQHTP-SMCPNTWAnkfwWIGCMLAFLVKMP 209
Cdd:MTH00204 149 FLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKlPLSIQKWL----LVGFFLSLAVKIP 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 210 LYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPLTKELSYPFIV-LALWGVIMTGSICLRQTDLKSLIA 288
Cdd:MTH00204 225 QIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVmLSVIAVIYGSLTTCRQVDFKRLIA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 289 YSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANL 368
Cdd:MTH00204 305 YSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANM 384
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 221145599 369 ALPPLPNLMGELMIITSLFSWSWWTLALTGAGTLITAGYSLYMF 412
Cdd:MTH00204 385 GFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
57-412 |
3.63e-70 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 230.32 E-value: 3.63e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 57 LATDGLSTPLLVLTCWLLPLMILASQN---HLTTEplnrqrmYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLIL 133
Cdd:MTH00217 76 FAVDGISIFFLILTALLTPICILISWNsikFLIKE-------FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLI 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 134 ITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTAGTLSLLTLQhtpSMCPNTWANKFWWIGCMLAFLVKMPLYGA 213
Cdd:MTH00217 149 IGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC---CLKIEKELQYFIFLGFFLSLAIKIPKIPF 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 214 HLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPLTKELSYPFI-VLALWGVIMTGSICLRQTDLKSLIAYSSV 292
Cdd:MTH00217 226 HIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQVDLKRIIAYSSV 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 293 SHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLALPP 372
Cdd:MTH00217 306 AHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPL 385
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 221145599 373 LPNLMGELMIITSLFSWSWWTLALTGAGTLITAGYSLYMF 412
Cdd:MTH00217 386 SCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-401 |
1.27e-67 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 217.95 E-value: 1.27e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 113 ATEILMFYVMFEATLIPTLILITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTAGTLSLLTLQHTPSMCPNTWA 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 193 NKFWWIGCMLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPLTKELSYPFIVLALWGVIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 273 TGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLA-NTNYERTHSRTLLLARGLQM 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 221145599 352 ALPLMSMWWFTASLANLALPPLPNLMGELMIITSLFSWSWWTLALTGAGT 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
55-410 |
2.26e-65 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 218.64 E-value: 2.26e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 55 LYLATDGLSTPLLVLTCWLLPLMILASQNHLTTeplnRQRMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLILI 134
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLIL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 135 TRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTAGTLSLLTLQHTPSMCPNTwANKFWWIGCMLAFLVKMPLYGAH 214
Cdd:MTH00226 172 GIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQ-TQKWIFLGIFLAMAVKIPIFPFH 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 215 LWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPL-TKELSYPFIVLALWGVIMTGSICLRQTDLKSLIAYSSVS 293
Cdd:MTH00226 251 IWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 294 HMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLALPPL 373
Cdd:MTH00226 331 HMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPS 410
|
330 340 350
....*....|....*....|....*....|....*..
gi 221145599 374 PNLMGELMIITSLFSWSWWTLALTGAGTLITAGYSLY 410
Cdd:MTH00226 411 GNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-425 |
2.65e-52 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 183.69 E-value: 2.65e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 53 LNLYLATDGLSTPLLVLTCWLLPLMILASQNhLTTEPlnrqRMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLI 132
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWK-VTRKP----RLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYL 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 133 LITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNTAGTLSL----LTLQHTPsmcpnTWANKFWWIGCMLAFLVKM 208
Cdd:PRK12561 126 LISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFdlaeLGAKSYP-----LALELLLYAGFLIAFGVKL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 209 PLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPLTKELSYPfiVLALWGV--IMTGSIC-LRQTDLKS 285
Cdd:PRK12561 200 PIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAP--ALAILGVvnIIYGALNaFAQDNVKR 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 286 LIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHsrTLLLAR--GLQMALPLMSMWWFTA 363
Cdd:PRK12561 278 RLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTH--TLSIPNmgGLAKVMPKTFALFTAS 355
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 221145599 364 SLANLALPPLPNLMGELMI---ITS--LFSWSW--WTLALTGAGTLITAGYSLYM----FLMTQRGQLPSHIF 425
Cdd:PRK12561 356 SMASLALPGMSGFVSELTVflgITSsdVYSSTFrtITILLAAVGLILTPIYLLSMlrrvFYGPRSELLPALAV 428
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-416 |
8.02e-47 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 167.25 E-value: 8.02e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 1 MLKILIPtLLMIPTAWLVPR--KWLWPSSLLHSLMIATISLTWLKNISETGWSSLNL---------YLATDGLSTPLLVL 69
Cdd:COG0651 6 ILPVLLP-LLAAALLLLLGRrrRLQRALSLLASLALLALALALLLQVLAGGPLVYALggwpapfgiVLVADRLSALFLLL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 70 TCWLLPLMILASQNHLTTEPlnRQRMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLILITRWGNQtERLNAGTY 149
Cdd:COG0651 85 TALVALAVLLYSIGYMRHER--RGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK-EALRAGLK 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 150 FLFYTLAGSLPLLVALLLLQNTAGTLSLLTLQHTPSMCPNTWANKFWWIgCMLAFLVKMPLYGAHLWLPKAHVEAPVAGS 229
Cdd:COG0651 162 YLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFAL-LLVGFGIKAALFPLHFWLPDAYPAAPSPVS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 230 MVLAAVLLKLGGYGMMRMLTVLDP--LTKELSYPFIVLALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTP 307
Cdd:COG0651 241 ALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTP 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 308 WGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLF 387
Cdd:COG0651 321 LGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAAL 400
|
410 420 430
....*....|....*....|....*....|
gi 221145599 388 -SWSWWTLALTGAGTLITAGYSLYMFLMTQ 416
Cdd:COG0651 401 eAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
99-410 |
6.34e-45 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 161.61 E-value: 6.34e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 99 LLTSLQFFLILAFGATEILMFYVMFEATLIPTLILITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLlqntagTLSLL 178
Cdd:MTH00094 67 LSNLLILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK------NFFFF 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 179 TLQHtpSMCPNTWANKFWwigCMLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPLtkeL 258
Cdd:MTH00094 141 SLCY--FDFFLSWEMFFI---LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---Y 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 259 SYPFIVLALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERT 338
Cdd:MTH00094 213 NNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHIS 292
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 221145599 339 HSRTLLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLFSWSWWTLALTGAGTLITAGYSLY 410
Cdd:MTH00094 293 KSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLF 364
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
38-411 |
1.90e-43 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 160.26 E-value: 1.90e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 38 SLTWLKNISETgWSslnlyLATDGLSTPLLVLTCWLLPLMILASQNhltteplnrqrmyISLLTSLQFFLILA------- 110
Cdd:PRK02546 70 SYSWLPQLGLT-WS-----VGADGLSMPLILLTGFITTLAVLAAWP-------------VTFKPKLFYFLMLAmyggqia 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 111 -FGATEILMFYVMFEATLIPTLILITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNTAGTLSLlTLQHTPSMCPN 189
Cdd:PRK02546 131 vFAVQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTF-DMTALAAKDFG 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 190 TWANKFWWIGCMLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPLTKELSYP-FIVLALW 268
Cdd:PRK02546 209 LGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVV 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 269 GVIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARG 348
Cdd:PRK02546 289 NIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGG 368
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 349 LQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLFSWSWWTLA-------LTGAGTLITAGYSLYM 411
Cdd:PRK02546 369 VGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYTLPfrvvvvfLAAVGVILTPIYLLSM 438
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-411 |
3.88e-41 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 153.18 E-value: 3.88e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 57 LATDGLSTPLLVLTCWLLPLMILASQnhlttePLNRQrmyisllTSLQFFLILA--------FGATEILMFYVMFEATLI 128
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAW------PVTRN-------SRLFYFLMLAmysgqiglFSSRDLLLFFIMWELELI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 129 PTLILITRWGNQtERLNAGTYFLFYTLAGSLPLLVallllqntaGTLSL-LTLQHTPSMCPNTWANK--------FWWIG 199
Cdd:CHL00011 147 PVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLI---------GVLGMgLYGSNEPTLNFETLANQsypvaleiLFYIG 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 200 CMLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPLTKELSYPFIVL-ALWGVIMTGSICL 278
Cdd:CHL00011 217 FLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIvGAIQIIYAASTSL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 279 RQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERThsRTLLLAR--GLQMALPLM 356
Cdd:CHL00011 297 GQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKI 374
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 221145599 357 SMWWFTASLANLALPPLPNLMGELM----IITS---LFSWSWWTLALTGAGTLITAGYSLYM 411
Cdd:CHL00011 375 FTMFSSFSMASLALPGMSGFVAELIvffgIITSqkyLLMPKILITFVMAIGMILTPIYLLSM 436
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
53-429 |
6.62e-38 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 144.46 E-value: 6.62e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 53 LNLYLATDGLSTPLLVLTCWLLPLMILASQnhlttEPLNRQRMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLI 132
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 133 LITRWGNQtERLNAGTYFLFYTLAGSLPLLvallllqntAGTLSLLTLQHTPSMCPNTWANK--------FWWIGCMLAF 204
Cdd:PRK06473 146 LIAIWGGQ-RRGYAATKFLLYTAISGILIL---------VSFLGLVWLSGASSFDYEPLRSHtlplstqlLLLAPILVGF 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 205 LVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPLTKELSYPFivLALWGVI--MTGSIC-LRQT 281
Cdd:PRK06473 216 GIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPW--LATWAVVsvLYGASCaIAQK 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 282 DLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGL---QMALPLMSM 358
Cdd:PRK06473 294 DMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGS 373
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 221145599 359 WWFTASLANLALPPLPNLMGELMIITSLFSWSWWTLALTGAGTLITAGYSLYMFLMTQRGQLPSHIFSIEP 429
Cdd:PRK06473 374 LMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPR 444
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
1.46e-32 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 119.55 E-value: 1.46e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 1 MLKILIPTLLMIPTAWLVPRKWLWPSSLLHSLMIATISLTWLKNISETGWSSLNLYLATDGLSTPLLVLTCWLLPLMILA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 221145599 81 SQNHLTTEPLNRQRMYISLLTSLQFFLILA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
53-388 |
8.13e-30 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 121.36 E-value: 8.13e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 53 LNLYLATDGLSTPLLVLTCWLLPLMILASqnhltTEPLNRQRMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLI 132
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLNSLLTWIAIYSI-----GENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 133 LITRWGNQtERLNAGTYFLFYT----------------LAGSLPLLVALLLLQNTAGTLSLLTLqhtpsmcpntwankfw 196
Cdd:PRK07363 146 LIAIWGGE-KRGYASIKFLIYTavsgllvlaaflgivwLSGSTSFDYDAISTQNLSLNTQLILL---------------- 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 197 wIGCMLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPLTKELSYPfiVLALWGVI--MTG 274
Cdd:PRK07363 209 -TGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTIsvIYG 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 275 S-ICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQ--- 350
Cdd:PRK07363 286 AlSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMnpi 365
|
330 340 350
....*....|....*....|....*....|....*...
gi 221145599 351 MALPLMSMWWFTASLANLALPPLPNLMGELMIITSLFS 388
Cdd:PRK07363 366 RGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFS 403
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-407 |
1.72e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 114.59 E-value: 1.72e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 57 LATDGLSTPLLVLTCWLLPLMILASQnhltTEPLNRQRMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLILITR 136
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAI----GYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 137 WGNQtERLNAGTYFLFYTLAGSLPLLVALLLLQNTAGTLSLLTLQHT-PSMCPNTWANKFwwigCMLAFLVKMPLYGAHL 215
Cdd:PRK08375 149 GGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGAlAENPTVVTAFGF----VLLALALKAAVFPLHT 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 216 WLPKAHVEAPVAGSMVLAAVLLKLGGYGMMR-MLTVLDPLTKE---LSYPFIVLALWGVIMTGSICLRQTDLKSLIAYSS 291
Cdd:PRK08375 224 WLPRAYPAAPPVVTALLSGLVTKVAVYALIRiYFTVFGGDFRFalgLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYST 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 292 VSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLALP 371
Cdd:PRK08375 304 VSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVP 383
|
330 340 350
....*....|....*....|....*....|....*..
gi 221145599 372 PLPNLMGELMIITSLFS-WSWWTLALTGAGTLITAGY 407
Cdd:PRK08375 384 PTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-396 |
2.88e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 114.30 E-value: 2.88e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 57 LATDGLSTPLLVLTCWLLPLMILASQNHLTTEPLNRqrMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLILITR 136
Cdd:PRK12667 78 YEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPE--WYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAY 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 137 WGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTAGTL-----SLLTLQHTPSMCPNTWANKFWWIGCMLA-----FLV 206
Cdd:PRK12667 156 YRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLnmadlSAKIRGLSFPLTGGLAGNPPLALGVALAlalwaFTI 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 207 KMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRML-------TVLDPLTKELSYPFIVLALWGVIMTGSICLR 279
Cdd:PRK12667 236 KAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 280 QTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMW 359
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFA 395
|
330 340 350
....*....|....*....|....*....|....*..
gi 221145599 360 WFTASLANLALPPLPNLMGELMIITSLFSWSWWTLAL 396
Cdd:PRK12667 396 FLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPAL 432
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
214-396 |
8.44e-24 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 103.86 E-value: 8.44e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 214 HLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMR--MLTVLDPLTKELSYPFIVLALWGVIMTGSICLRQTDLKSLIAYSS 291
Cdd:PRK06458 234 HAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRyyILIDAAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSS 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 292 VSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLALP 371
Cdd:PRK06458 314 IEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMP 393
|
170 180
....*....|....*....|....*
gi 221145599 372 PLPNLMGELMIITSLFSWSWWTLAL 396
Cdd:PRK06458 394 PFGVFISEFLILTAGLARGPLLIAI 418
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
91-404 |
5.14e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 83.08 E-value: 5.14e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 91 NRQRMYISLLTSLQFFLILAFGATEILMFYVMFEATLIPTLILITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQN 170
Cdd:PRK07234 91 AKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 171 TAGTLSLLTLQHTPsmcPNTWANKFwwigcmLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTV 250
Cdd:PRK07234 170 ANGTFAFSGLATAD---PEAFALIA------LGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 251 LDPLTKELSYPFIVLALWGVImtgsICLRQTDLKSLIAYSSVSHMGLVVGGILIqtpwgftgALILMIAHGLTSSALFCL 330
Cdd:PRK07234 241 VPGLDLIVRIFGVGTALLGVL----FALLEKDLKRMLAFSTISQLGFILAAPLV--------GGLYALAHGLVKSTLFLC 308
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 221145599 331 ANTNYERTHS--RTLLLARGLQMALPLmsmwwftASLANLALPPLPNLMGELMIITSLFSWSWWTLALTGAGTLIT 404
Cdd:PRK07234 309 AGALPSRNFTelISQMLGIGKWIPLTM-------ASFSIAGFPLLAGFVSKVLTLKNLLPWQAIALNLAAVGTAAS 377
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
202-387 |
7.52e-17 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 83.24 E-value: 7.52e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 202 LAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTvlDPLTKELSYPFIVL------ALWGVIMTgs 275
Cdd:PRK08667 213 LGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLM--DVLSPELWWGVLILlagsisALLGVIYA-- 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 276 icLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTG-----------ALILMIAHGLTSSALFCLANTNYERTHSRTLL 344
Cdd:PRK08667 289 --LKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGldtlallalggALFHSLNHALFKSLLFLTAGSVVHATGTRNIE 366
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 221145599 345 LARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLF 387
Cdd:PRK08667 367 KMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-410 |
5.28e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 80.01 E-value: 5.28e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 109 LAFGATEILMFYVMFEATLIPTLILITRwGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTAGTLSL----LTLQHTP 184
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMadlaVRLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 185 SMCPNTwankfwwIGCML--AFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPlTKELSYPF 262
Cdd:PRK12665 205 SGTRTA-------LFAVLlvAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 263 IVLALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRT 342
Cdd:PRK12665 277 MVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSS 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 343 LLLARGLQMALPLMSMWWFTASLaNLA-LPPLPNLMGELMIITS-LFSWSWWTLALTgAGTLITAGYSLY 410
Cdd:PRK12665 357 LRRLGGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALLEAgAEDGTWLAWALV-AGGVVTSLLTLY 424
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
36-373 |
9.12e-16 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 80.09 E-value: 9.12e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 36 TISLTWLKNISETGwSSLNLYLATDGLST--PLLVLTCWLLPLMILASQNHLTTEPLNrqrmYISLLTSLQFFLILAFGA 113
Cdd:PRK12650 55 TWSVTWIPDLLGNG-VDVNLALRADALSLffALLALVIGAVVFIYSARYLPRKKGNTS----FYLLMTAFMAAMLLLVLA 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 114 TEILMFYVMFEATLIPTLILITRWGNQTERLNAGTyfLFYTLAGSLPLLVALLLLQNTAGTLSLLTLQHTPSmcpntWAN 193
Cdd:PRK12650 130 DDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDV-----WAE 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 194 KFWWIGcMLAFLVKMPLYGA------HLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPLTKeLSYPFIVLAL 267
Cdd:PRK12650 203 KPGLTT-VVAVLIAVAAFTKsaqfpfHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAV-WNWLLIIVGM 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 268 WGVIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTL--LL 345
Cdd:PRK12650 281 ITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIrrLG 360
|
330 340
....*....|....*....|....*...
gi 221145599 346 ARGLQMALPLMSMWWFTASLAnlALPPL 373
Cdd:PRK12650 361 SLWRRMPFTFVSVTIAALSMA--AVPPL 386
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
204-414 |
2.54e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 77.87 E-value: 2.54e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 204 FLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVL--DPLTKELSYPFIVLALWGVIMTGSICLRQT 281
Cdd:PRK08676 216 FLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIFSIAVAAFSMLSQR 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 282 DLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWF 361
Cdd:PRK08676 296 NLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVI 375
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 221145599 362 TASLANLALPPLPNLMGELMIITSLFSWSWWTLALTgAGTLITAGYSLYMFLM 414
Cdd:PRK08676 376 LGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAV-LLLLLLAASSFAIFLL 427
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
110-404 |
2.75e-15 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 77.68 E-value: 2.75e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 110 AFGATEILMFYVMFEATLIPTLILITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTAGTLS-------LLTLQH 182
Cdd:PRK12663 124 SFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNmahiamrLNDMGD 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 183 TPSMCpnTWANKFwwigcMLAFLVKMPLYGAHlWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPLTKELSYPF 262
Cdd:PRK12663 203 TATLT--TIALLF-----LLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 263 IVLALWGVIMTGSI-CLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSR 341
Cdd:PRK12663 275 LATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYR 354
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 221145599 342 TLLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIIT-SLFSWSWWTLALTGAGTLIT 404
Cdd:PRK12663 355 SLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQgALDNGAYILLALMLITSLIT 418
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
201-428 |
2.32e-14 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 75.42 E-value: 2.32e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 201 MLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLdPLTKELS------------YPFIVLALW 268
Cdd:PRK08668 203 LAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVL-PGTKLFSefgtyrgvplfnYILAWLGNI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 269 GVIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARG 348
Cdd:PRK08668 282 SIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTKISEMGG 361
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 349 LQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLFSWSwwtLALTGAGTLI-TAGYSLYMFLMTQR---GQLPSHI 424
Cdd:PRK08668 362 LIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKG---MPITAFMAFFgSIGSFLYVFRPLAGvflGQLPSDH 438
|
....
gi 221145599 425 FSIE 428
Cdd:PRK08668 439 KDVK 442
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
34-431 |
7.75e-14 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 74.02 E-value: 7.75e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 34 IATISLTWLKNISetgwssLNLYLATDGLSTPLLVLTCWLLPLMILASQNHLTTEPLNRQRMYISLLTSLQFFLILAFGA 113
Cdd:PRK12646 57 YLSTSIPWMKTLD------INLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLPRFYFYLTLFMFSMIGIVLSD 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 114 TEILMfYVMFEATLIPTLILITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTAGT---LSLLTLQHTPSMCPnt 190
Cdd:PRK12646 131 NTILM-YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTnniTEILGQADHIKNHG-- 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 191 wankfWWIGCMLAFLV----KMPLYGAHLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMLTVLDpLTKELSYPFIVL 265
Cdd:PRK12646 208 -----LFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFV 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 266 ALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVV-----GGILIQTPWG---------FTGALILMIAHGLTSSALFCLA 331
Cdd:PRK12646 281 GLITMLFGSITALKQWDLKGILAYSTISQLGMIMamvgiGGGYAQHQQDaiasiyvfvLFAALFHLMNHAIFKCALFMGV 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 332 NTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLFS---WSWWTLALTGAGTLI----- 403
Cdd:PRK12646 361 GIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQtgqLSQFSLISMIIIVFIgvias 440
|
410 420 430
....*....|....*....|....*....|
gi 221145599 404 --TAGYSLYMFLMTQRGQLPSHIFSIEPTH 431
Cdd:PRK12646 441 ifTFTYALYMVKEVFWGKYDSKVFTKKNIH 470
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-402 |
2.96e-13 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 71.87 E-value: 2.96e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 214 HLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMLTVL--DPLTkelsypFIVLALWGV---IMTGSICLRQTDLKSLI 287
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARLNPVLggTPLW------QTILPLFGGltmLTGALLAVRQTDLKLIL 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 288 AYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLAN 367
Cdd:PRK12647 288 AYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSM 367
|
170 180 190
....*....|....*....|....*....|....*
gi 221145599 368 LALPPLPNLMGELMIITSLFSWSWWTLALTGAGTL 402
Cdd:PRK12647 368 AGLPPLFGFLAKELIYEALLEAPLWSLILTVAAVL 402
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
76-407 |
1.78e-12 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 69.03 E-value: 1.78e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 76 LMILASQNHLTTEPLNRQRMyislltslqFFLILAFGAT------EILMFYVMFEATLIPTLILiTRWGNQTERLNAGTY 149
Cdd:PRK08377 93 IMSIFSLKAVEVEPIDKYAM---------LFLLLMLGATgmiatgDIFNLFVFMEITAITAYAL-TAYNKTGEAAEASMK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 150 FLFYTLAGSLPLLVALLLLQNTAGTLSLLTLQHTPSMCPNTWANkfwwIGCMLAFL---VKMPLYGAHLWLPKAHVEAPV 226
Cdd:PRK08377 163 YIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTIDPTVAQ----VGLALLIFglaVEAELFPLNAWAPDAYQAAPH 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 227 AGSMVLAAVLLKLGGYGMMRMLTVLDPLTKELSYP--FIVLALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILI 304
Cdd:PRK08377 239 PITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLklVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALAL 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 305 QTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIIT 384
Cdd:PRK08377 319 GTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIIL 398
|
330 340
....*....|....*....|....
gi 221145599 385 SLFSWSW-WTLALTGAGTLITAGY 407
Cdd:PRK08377 399 AGLSAGYtWPVALVLGASVVEAVY 422
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
76-413 |
3.06e-12 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 68.22 E-value: 3.06e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 76 LMILASQNHLTTEPLNRQRMYISLLTSLQFFLILAfGATEILMFYVMFEATLIPTLILITRWGNQTERLNAGT-YF---- 150
Cdd:COG1007 85 LVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFllga 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 151 -----------LFYTLAGSLPLLVALLLLQNTAGTLSLLtlqhtpsmcpntwankfwWIGCML---AFLVKMPLYGAHLW 216
Cdd:COG1007 164 lssgfllygisLLYGATGSLNLAGIAAALAAGGANSPLL------------------LLGLVLvlaGLAFKLSAVPFHMW 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 217 LPKAHVEAPVAGSMVLAAVLlKLGGYGM-MRML-TVLDPLTKELSYPFIVLALwgVIMT-GSIC-LRQTDLKSLIAYSSV 292
Cdd:COG1007 226 TPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLLvEAFPGLAADWQLLLAVLAV--LSMTvGNLAaLAQTNVKRMLAYSSI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 293 SHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALF-CLANTNYERTHSRTLLLARGLQMALPLMSmWWFTASLANLA-L 370
Cdd:COG1007 303 AHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEIEDLAGLARRSPLLA-LAMTIFLLSLAgI 381
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 221145599 371 PPLPNLMGELMIITSLFSWSWWTLALTGA-GTLITAGYSL----YMFL 413
Cdd:COG1007 382 PPTAGFFGKFYVFSAAVEAGLYWLAVIAVlNSVISAYYYLrvvkAMYF 429
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
214-397 |
3.71e-12 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 68.08 E-value: 3.71e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 214 HLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMLTVLDPLTKELSYPFIVLALWGVIMTGSICLRQTDLKSLIAYSSV 292
Cdd:PRK06525 227 YSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTI 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 293 SHMGLVVGGILIQ---TPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLA 369
Cdd:PRK06525 306 TQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITG 385
|
170 180 190
....*....|....*....|....*....|.
gi 221145599 370 LPPLPNLMGELMIITSLFSWS---WWTLALT 397
Cdd:PRK06525 386 VPPFNGFFSKFPIFAAGFELSveyWILLPAM 416
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
214-424 |
4.82e-12 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 67.87 E-value: 4.82e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 214 HLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMLTVLDpLTKELSYPFIVLALWGVIMTGSICLRQTDLKSLIAYSSV 292
Cdd:COG1009 231 HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFA-LSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTV 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 293 SHMGLVVGGILIQtpwGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLALPP 372
Cdd:COG1009 309 SQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPP 385
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 221145599 373 LPNLMGELMIITSLF---SWSWWTLALTGAGTLITAGYSLYMFLMT----QRGQLPSHI 424
Cdd:COG1009 386 FAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVffgkPRPKTPKHP 444
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
34-409 |
2.59e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 66.01 E-value: 2.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 34 IATISLTWLKNISetgwssLNLYLATDGLSTpLLVLTCWLLPLMILASQNHLTTEPLNRQRMYISLLTSLQFFLILAFGA 113
Cdd:PRK12649 59 IITGSISWLPSAG------VEFSIYADGLAV-LIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSG 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 114 TEILMFyVMFEATLIPTLILITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTAGTLSLLTLQHTPSMCPNTWAN 193
Cdd:PRK12649 132 NTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGH 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 194 KFWWIGCMLAFL------VKMPLYgahLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRMltvlDPLTKELSYPFIVLA 266
Cdd:PRK12649 211 PLFLITLILIFIgaaaksAQGPFY---IWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARI----HPIFSGTEAWFILVS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 267 LWGVI---MTGSICLRQTDLKSLIAYSSVSHMGLVV---GGILIQTP-WGFTGALILMIAHGLTSSALFCLANTNYERTH 339
Cdd:PRK12649 283 GTGMItmvLAGFLAFRQTDIKAILAYSTISQLAYLMtmyGYTTYHEPgLGVAAATFHLLNHATFKACLFLVAGIVAHEAA 362
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 221145599 340 SRTLLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSL--------FSWSWWTLALTGAGTLITAGYSL 409
Cdd:PRK12649 363 TRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSvemgaligGPFTIIIPAVAVLGGVFTFAYSI 440
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
73-345 |
6.01e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 64.17 E-value: 6.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 73 LLPLMI-LASQNHLTTEPLNRQRMYISLltSLqFFLILAFGATEILMFYVMFEATLIPTLILITRWGNQTERLNAGTYFL 151
Cdd:MTH00062 52 LLVLFLgLYSQVMFYNLLSGVSRFFLFL--SL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 152 FYTLAGSLPLLVALLLLQNTAGTLSLLtlqhtpsmCPNTWANKFWWIGCMLA--FLVKMPLYGAHLWLPKAHVEAPVAGS 229
Cdd:MTH00062 129 GYLLLTSLPLLLCLLYLSLVNGSFNFS--------DWGSDDSVSLIVYYVLSfmFITKVPLFPFHTWLPIVHAEASSPVS 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 230 MVLAAVLLKLGGYGMMRMLTVLDPLTKeLSYPFIVLALWGVIMTGSicLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWG 309
Cdd:MTH00062 201 IFLSGYIMKLGLLGVYRFCGFIFSGSF-LGYLFLCCLFSVFFLITA--CSELDGKRWLAFLSLSHILVPVLGLFVGDWSS 277
|
250 260 270
....*....|....*....|....*....|....*.
gi 221145599 310 FTGALILMIAHGLTSSALFCLANTNYERTHSRTLLL 345
Cdd:MTH00062 278 INLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVL 313
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-393 |
6.28e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 64.37 E-value: 6.28e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 201 MLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRML-----TVLDPLTKELSYPFIVLALWGVIMTGS 275
Cdd:PRK12662 216 MVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkANFVFTTLPFNNVFMILAALAIVFGSV 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 276 ICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANT---NYERTHSRTLLlarGLQMA 352
Cdd:PRK12662 296 LAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSisyHFGTTKLEDCL---NLWKS 372
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 221145599 353 LPLMSMWWFTASLANLALPPLPNLMGELMIITSLFSWSWWT 393
Cdd:PRK12662 373 MPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWI 413
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
115-387 |
2.36e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 62.42 E-value: 2.36e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 115 EILMFYVMFEATLIPTLILITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTAGTLSLLTLQHTPSMCPnTWANK 194
Cdd:PRK08376 142 DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENP-TVVAK 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 195 FWWIGCMLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLaaVLLKLGG-YGMMRML-TVLDPL--TKELSYPFIVLALWGV 270
Cdd:PRK08376 221 IALALFIAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLfSIYGPAinLATVGWVIIILGCLTM 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 271 IMTGSICLRQTDLKSLIAYSSVSHMG---------LVVGGILIQTPWGFT---GALILMIAHGLTSSALFCLANTNYERT 338
Cdd:PRK08376 299 FVGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEIalaGGIYHIVNHALYKALLFLTAGAVIYET 378
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 221145599 339 HSRTLLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLF 387
Cdd:PRK08376 379 GTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSA 427
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
208-388 |
3.28e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 62.21 E-value: 3.28e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 208 MPLygaHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRmlTVLDPL-TKELSYPFIVLALWGVIMTGSI--CLRQTDLK 284
Cdd:PRK06521 227 VPL---HVWLPRAHPAAPSHVSALMSGVMLKVAIYGILR--VVFDLLgAPGWWWGVLVLALGAISAVLGVlyALAEHDLK 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 285 SLIAYSSVSHMGLVVGGI---LI--------QTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMAL 353
Cdd:PRK06521 302 RLLAYSTIENIGIIFVGLglaMVfiaygmplLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRM 381
|
170 180 190
....*....|....*....|....*....|....*
gi 221145599 354 PLMSMWWFTASLANLALPPLPNLMGELMIITSLFS 388
Cdd:PRK06521 382 PWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLLS 416
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
208-387 |
7.49e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 61.00 E-value: 7.49e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 208 MPLYGahlWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPLTKELSYPFIVLALWGVIMTGSICLRQTDLKSLI 287
Cdd:PRK08042 197 IPLHG---WVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLL 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 288 AYSSVSHMGLV-------VGGILIQTP----WGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLM 356
Cdd:PRK08042 274 AYHTLENIGIIllglgagVTGIALEQPaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVI 353
|
170 180 190
....*....|....*....|....*....|.
gi 221145599 357 SMWWFTASLANLALPPLPNLMGELMIITSLF 387
Cdd:PRK08042 354 SIAMLVGLMAMAALPPLNGFAGEWVIYQSFF 384
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
205-422 |
5.26e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 58.29 E-value: 5.26e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 205 LVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTV---LDPLTKEL--SYPFIVLALWGVIMTGSICLR 279
Cdd:PRK06589 221 IAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLSYLQRIFaeFNWLIFIPIVSIFYSSLKALK 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 280 QTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMW 359
Cdd:PRK06589 301 TDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFI 380
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 221145599 360 WFTASLANLALPPLPNLMGELMIITSLF--SWSWWTLALTGAGTLITAGYSLYMFLMTQRGQLPS 422
Cdd:PRK06589 381 ISISSLSLIGIPIFSGFISKFLILLAASeqNQPWLSIIVMLVVIASSILSALYLLKILSSIYKPS 445
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
214-410 |
1.36e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 57.24 E-value: 1.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 214 HLWLPKAhVEAPVAGSMVL-AAVLLKLGGYGMMRM------LTVLDPLTkelsypfIVLALWGVIMTGSICLRQTDLKSL 286
Cdd:PRK12644 223 HFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLapgfadVPVWRPTV-------LVLGLATMLLGGWRALRQHDLKLI 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 287 IAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMsMWWFTASLA 366
Cdd:PRK12644 295 LAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQPVL-AVVAALAAA 373
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 221145599 367 NLA-LPPLPNLMGELMIITSLF------SWSWWTLALTGAGTLITAGYSLY 410
Cdd:PRK12644 374 SMAgLPPLLGFVAKEAALEAVLhdgalgPAGPVVLAGIVLGSILTVAYSLR 424
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
201-403 |
1.70e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 53.32 E-value: 1.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 201 MLAFLVKMPLYGAHLWLPKAHVEA--PVAGsmvLAAVLLKLGGYGMMRMLTVLDPLTKELSYPFIVLALWGV----IMTG 274
Cdd:PRK12666 217 LVVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGglatLAFG 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 275 SI-CLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLAN-----------------TNYE 336
Cdd:PRK12666 294 AIgVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADlverqrgaaadrlavtpELYD 373
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 221145599 337 RTHSRTLLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLFS--------WSWWTLALTGAGTLI 403
Cdd:PRK12666 374 LDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNppgagaawWLWALVLLSGLAALI 448
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
214-328 |
3.16e-07 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 52.52 E-value: 3.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 214 HLWLPKAHVEAPVAGSMVLAAVLlKLGGYGM-MRMLTV-LDPLTKELSYPFIVLALWGVIMTGSICLRQTDLKSLIAYSS 291
Cdd:PRK05777 224 HMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLLVVaFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
90 100 110
....*....|....*....|....*....|....*..
gi 221145599 292 VSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALF 328
Cdd:PRK05777 303 IAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
263-383 |
6.24e-07 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 51.57 E-value: 6.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 263 IVLALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRT 342
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 221145599 343 LLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMII 383
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLA 390
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
203-426 |
3.89e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 49.18 E-value: 3.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 203 AFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMR-MLTVLDPLTKELSYPFIVLALWGVIMTGSICLRQT 281
Cdd:TIGR01770 212 GLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRlFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQK 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 282 DLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALF-CLANT-NYERTHSRTLLLARGLQMALPLM--S 357
Cdd:TIGR01770 292 KVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAFgVLSLLrSYKDEWIEYISDFAGLFKTNPILaiL 371
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 221145599 358 MWWFTASLAnlALPPLPNLMGELMIITSLFSWSWWTLALTGA-GTLITAGYSL----YMFLMTQRGQLPSHIFS 426
Cdd:TIGR01770 372 ILIFMFSLA--GIPPLAGFFGKFYVFFALLKSGLYWLAVIAVlTSVIGAFYYLrvvkVMYFDKPERRIPSNPQS 443
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
57-388 |
1.18e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 47.65 E-value: 1.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 57 LATDGLSTPLLVLTCWLLPLMILASQNHLTTEP-LNRQRMYISLLTslqFFLILAFGATEILMFYVMFEATLIPTLILIT 135
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLFT---FLMMVLVTSDNYLQLFIGWEGVGVCSYLLVA 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 136 RWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNTAGTLSLLTLQ------------HTPSMCPNTWANKFWWIGCMLA 203
Cdd:MTH00032 153 FWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsvgsgimdrgYYGGGAYESPLAPFAIIGILLL 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 204 F--LVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLtvldPLTKELSYPFIVLALWGVI---MTGSICL 278
Cdd:MTH00032 233 IgcIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGL 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 279 RQTDLKSLIAYSSVSHMGLVVggILIQTPWGFTGALILMIAHGLTSSALFCLA-----NTNYERTHSRTLllaRGLQMAL 353
Cdd:MTH00032 309 VQNDLKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAgsvihSTTVDEQDMRKM---GGLIHSI 383
|
330 340 350
....*....|....*....|....*....|....*
gi 221145599 354 PLMSMWWFTASLANLALPPLPNLMGELMIITSLFS 388
Cdd:MTH00032 384 PFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTYS 418
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
201-414 |
4.47e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 45.26 E-value: 4.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 201 MLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAVLlKLGGYGMMRMLTvldpLTKELSYPFIVLALWGVIMTGSICLRQ 280
Cdd:MTH00144 91 LLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLLSNFL----DLYWLAYLLCVISVLSALVGSIGGLNQ 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 281 TDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTssaLFCLANTNYERTHSRTLLLARglqmalPLMSMWW 360
Cdd:MTH00144 166 TQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFL---FFSLWSGDSGSMKDLGSLKPS------YKTGLSI 236
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 221145599 361 FTASLANLALPPLPNLMGELMIITSLFSWSWWTLALTG-AGTLITAGYSLYMFLM 414
Cdd:MTH00144 237 ISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLlLGSLISLFFYLSVFFS 291
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
108-397 |
2.46e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 43.10 E-value: 2.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 108 ILAFGATEILMFYVMFEATLIPTLILITRWGNQTERLNAG-TYFLFYTLAGSLPLLVALLLLQNTAGT-LSLLTLQHTPS 185
Cdd:MTH00196 7 LCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALSSGLFLFGCALLCGTTGGLhLSYINLVLNSG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 186 MCPNTWANKFWWIGCMLAFLVKMPLYGAHLWLPKAHVEAPVAGSMVLAAV--------LLKLGGYGMMrmltvldpltke 257
Cdd:MTH00196 87 QSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVpklgifsiLVSIGLNVNI------------ 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 258 lsypFIVLALWGVIMTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPWGFTGALILMIAHGLTSSALFCLA---NTN 334
Cdd:MTH00196 155 ----LLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIIlalNVY 230
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 221145599 335 YErthsrTLLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLFSWSWWTLALT 397
Cdd:MTH00196 231 KN-----LIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLL 288
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-418 |
5.23e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 42.32 E-value: 5.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 197 WIGCMLAFLVKM---------PLygaHLWLPKAhVEAPV-------AGSMVLAAVLLklggygMMRMltvlDPLTKELSY 260
Cdd:PRK07376 224 WLALLLCILVFLgpmaksaqfPL---HVWLPDA-MEGPTpisalihAATMVAAGVFL------VARM----YPVFEQFPA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 261 PFIVLALWGVI---MTGSICLRQTDLKSLIAYSSVSHMGLVVGGILIQTPwgfTGALILMIAHGLTSSALFCLANT---- 333
Cdd:PRK07376 290 VMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAY---SAGLFHLMTHAYFKAMLFLGSGSvihg 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 334 -----NYERTHSRTLLLARGLQMALPLMSMWWFTASLANLALPPLPNLMGELMIITSLFSWS--WWTLALTGAGtlITAG 406
Cdd:PRK07376 367 meevvGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANpaLWFVGFLTAG--MTAF 444
|
250
....*....|..
gi 221145599 407 YSLYMFLMTQRG 418
Cdd:PRK07376 445 YMFRMYFLTFEG 456
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
202-387 |
1.09e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 41.31 E-value: 1.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 202 LAFLVKMPLYGAHL--WLPKAHVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDPLTkeLSYPFIVLALWGVI--MTGSIC 277
Cdd:PRK06459 166 FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIP--IGYFGLTILAIGAFsiLFGALY 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 278 LRQTD-LKSLIAYSSVSHMG--LVVGGILIQTPWGFT--------GALILMIAHGLTSSALFCLANTnyerTHSRTLLLA 346
Cdd:PRK06459 244 AYVSEnVKGLLAFSTIENNGaiLVALGLYMVTKQLITsiehfsliTVILYSFAHSVAKTGLFLSSGL----QEKQSITYS 319
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 221145599 347 RGLQMALPLMSMWWFTASLAnlALPPLPNLMGELMIITSLF 387
Cdd:PRK06459 320 KKIRNRWIELGLTLLASSLS--GLLPNIGGVASWLLLESLF 358
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
214-396 |
3.03e-03 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 39.89 E-value: 3.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 214 HLWLPKAhVEAPVAGSMVLAAVLLKLGGYGMMRMLTVLDpLTKELSYPFIVLALWGVIMTGSICLRQTDLKSLIAYSSVS 293
Cdd:PRK07390 241 HLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQPVLA-LSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSA 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 294 HMGLVVGGILIQTPwgfTGALILMIAHGLTSSALFCLANTNYERTHSRTLLLARGLQMALPLMSMWWFTASLANLALPPL 373
Cdd:PRK07390 319 YLGLVFIAVGLQQP---DIALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSAGLVALLPL 395
|
170 180
....*....|....*....|...
gi 221145599 374 PNLMGELMIITSLFSWSWWTLAL 396
Cdd:PRK07390 396 GGFWALLRLADGLWAVSPWLVGV 418
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
212-299 |
5.24e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 39.29 E-value: 5.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 221145599 212 GAHLWLPKAhVEAPV-------AGSMVLAAVLLklggygMMRMltvlDPLTKELSYPFIVLALWG---VIMTGSICLRQT 281
Cdd:MTH00020 228 GLHTWLPDA-MEGPTpvsalihAATMVTAGVFL------LIRS----SPLFEQAPLALIIVTIVGsltVFFAATVGLVQN 296
|
90
....*....|....*...
gi 221145599 282 DLKSLIAYSSVSHMGLVV 299
Cdd:MTH00020 297 DLKKVIAYSTCSQLGYMV 314
|
|
| |
