|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.04e-161 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 454.28 E-value: 3.04e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 1 MSPFTKLISIMSLALGTTITITSNHWMMAWTGLEINTLAIIPLISKPHHPRAIEAATKYFLTQAAASALVLFSSITNALA 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 81 SGQWDLTQLNHPLSSLLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMKLPPLSILLLTSHMLNPTLINTLSIM 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMVIIIIYNPKLTLLTFYIYVLMTASIFLALNTTNTLNLHTLITTWTKAPSL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 241 NTTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGLFFYLRLAYCSTITLPPNSSNKMKQWSSKKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 218157261 321 TATLTPALTSLSITLLPLSPMILATI 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
8.26e-133 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 382.23 E-value: 8.26e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 1 MSPFTKLISIMSLALGTTITITSNHWMMAWTGLEINTLAIIPLISKPHHPRAIEAATKYFLTQAAASALVLFSSITNALA 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 81 SGQWDLTQLNHPLSSLLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMKLPPLsILLLTSHMLNPTLINTLSIM 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPF-ALILQIAPTNPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMVIIIIYNPKLTLLTFYIYVLMTASIFLALNTTNTLNLHTLITTWTKAPSL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 241 NTTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGLFFYLRLAYCSTITLPPNSSNKMKQWSSKKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*
gi 218157261 321 TATLTPAL-TSLSITLLPLSPMILA 344
Cdd:MTH00135 320 QLTLPLAIsTTATLMLLPLTPAILA 344
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.19e-129 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 374.26 E-value: 1.19e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 1 MSPFTKLISIMSLALGTTITITSNHWMMAWTGLEINTLAIIPLISKPHHPRAIEAATKYFLTQAAASALVLFSSITNALA 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 81 SGQWDLTQLNHPLSSLLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMKLPPLSILLLTSHMLNPTLINTLSIM 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMVIIIIYNPKLTLLTFYIYVLMTASIFLALNTTNTLNLHTLITTWTKAPSL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 241 NTTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGLFFYLRLAYCSTITLPPNSSNKMKQWSSKKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 218157261 321 TATLTPALTSLSITLLPLSPMILATI 346
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
4.73e-121 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 352.61 E-value: 4.73e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 1 MSPFTKLISIMSLALGTTITITSNHWMMAWTGLEINTLAIIPLISKPHHPRAIEAATKYFLTQAAASALVLFSSITNALA 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 81 SGQWDLTQLNHPLSSLLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMKLPPLSILLLTSHMLNPTLINTLSIM 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMVIIIIYNPKLTLLTFYIYVLMTASIFLALNTTNTLNLHTLITTWTKAPSL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 241 NTTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGLFFYLRLAYCSTITLPPNSSN-KMK-QWSSK 318
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNmKMKwQFENT 320
|
330 340
....*....|....*....|....*
gi 218157261 319 KPTaTLTPALTSLSITLLPLSPMIL 343
Cdd:MTH00105 321 KPM-TLLPTLIILSTMLLPLTPMLS 344
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
4.45e-99 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 296.49 E-value: 4.45e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 1 MSPFTKLISIMSLALGTTITITSNHWMMAWTGLEINTLAIIPLISKPHHPRAIEAATKYFLTQAAASALVLFSSITNALA 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 81 SGQWDLTQLNHPLSSLLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMKLPPLSILLLTSHMLNPTLINTLSIM 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMVIIIIYNPKLTLLTFYIYVLMTASIFLALNTTNTLNLHTLITTWTKAPSL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 241 NTTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGLFFYLRLAYCSTITLPPNSSNKMKQWSSKKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 218157261 321 TATLTPALTSLSITLLPLSPMILATI 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
7-336 |
1.84e-84 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 259.09 E-value: 1.84e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 7 LISIMSLALGTTITITSNHWMMAWTGLEINTLAIIPLISKPHHPRAIEAATKYFLTQAAASALVLFSSITNALASGQWDL 86
Cdd:MTH00041 7 IFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 87 TQLNHPLSSLLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMKLPPLSILLLTSHMLNPTLINTLSIMSIALGG 166
Cdd:MTH00041 87 NGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 167 WMGLNQTQTRKILAFSSISHLGWMVIIIIYNPKLTLLTFYIYVLMTASIFLALNTTNTLNLHTLITTWTKAPSLNTTLML 246
Cdd:MTH00041 167 WGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFIL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 247 TLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGLFFYLRLAYCSTITLPPNSSNKMKQWSSKKPTATLTP 326
Cdd:MTH00041 247 SILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGV 326
|
330
....*....|
gi 218157261 327 ALTSLSITLL 336
Cdd:MTH00041 327 ILSILSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
5.96e-63 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 203.52 E-value: 5.96e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 1 MSPFTKLISIMSLALGTTITITSNHWMMAWTGLEINTLAIIPLISKPHHPRAIEAATKYFLTQAAASALVLFSSITNALa 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 81 sgqwdLTQLNHPLSSLLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMKLPPLSILlltSHMLNPTLINTLSIM 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 161 SIALGGWMGLNQTQTRKILAFSSISHLGWMVIIIIYNPKLTLLTFYIYVLMTASIFLALNTTNTLNLHTLITTWTKAPSL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 241 NTTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGLFFYLRLAYCSTITLppNSSNKMKQWSSKKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLN--YNKNKWNLKKKKNK 310
|
330 340
....*....|....*....|...
gi 218157261 321 TATLTPALTSLSITLLPLSPMIL 343
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLLF 333
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-319 |
8.33e-48 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 163.90 E-value: 8.33e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 1 MSPFtKLISIMSLALGTTITITSNHWMMAWTGLEINTLAIIPLISKPHHPRAIEAATKYFLTQAAASALVLFSSITNALA 80
Cdd:MTH00144 2 SSPS-NLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 81 SGQWDltqlnhplSSLLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMKLPPLsiLLLTSHMLNPTLINTL--- 157
Cdd:MTH00144 81 SFSWF--------SMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPL--FLLSNFLDLYWLAYLLcvi 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 158 SIMSIALGGWMGLNQTQTRKILAFSSISHLGWMVIIIIYNPKLTLLTFYIYVLMTASIFLALNTTNTlNLHTLITTWTKA 237
Cdd:MTH00144 151 SVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDS-GSMKDLGSLKPS 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 238 PSLNTTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGLFFYLRLAYCSTItlppnSSNKMKQWSS 317
Cdd:MTH00144 230 YKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL-----SSSKSKKSNS 304
|
..
gi 218157261 318 KK 319
Cdd:MTH00144 305 SK 306
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
12-337 |
3.27e-44 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 154.55 E-value: 3.27e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 12 SLALGTTITITSNHWMMAWTGLEINTLAIIPLISKPHHPRAIEAATKYFLTQAAASALVLFSSITNALASGQWDLTqlnh 91
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFPSLLKNI---- 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 92 plSSLLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMKLPPLSILLLTSHMLNPTLINTLSIMSIALGGWMGLN 171
Cdd:MTH00011 90 --TALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 172 QTQTRKILAFSSISHLGWMVIIIIYNPKLTLLTFYIYVLMTASIFLALNTTNTLNLHTLITTWTKAPSLNTTLMLTLLSL 251
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 252 AGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGLFFYLRLAYCSTITLPPNSSNKMKQWSSKkpTATLTPaLTSL 331
Cdd:MTH00011 248 GGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFNFMYLSPTFSSLKSAPYEPK--TKILIS-MCTL 324
|
....*.
gi 218157261 332 SITLLP 337
Cdd:MTH00011 325 SLGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
12-313 |
7.39e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 145.59 E-value: 7.39e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 12 SLALGTTITITSNHWMMAWTGLEINTLAIIPLISKPHHPRAIEAATKYFLTQAAASALVLFSSItnalasgqwdLTQLNH 91
Cdd:MTH00197 6 IIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGS----------LSFSNL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 92 P---LSSLLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMKLPPLSILLLTSHmlNPTLINTLSIMSIALGGWM 168
Cdd:MTH00197 76 YlslLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSS--SFMGLLICSVLSSLIGGIG 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 169 GLNQTQTRKILAFSSISHLGWMVIIIIYNPKLTLLTFYIYVLMTASIFLALNTTNTLNLHTLITTWTKAPSLNTTLMLTL 248
Cdd:MTH00197 154 GMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSF 233
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 218157261 249 LSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGLFFYLRLAYCSTITLPPNSSNKMK 313
Cdd:MTH00197 234 LSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMK 298
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
2.48e-31 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 122.92 E-value: 2.48e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 14 ALGTTITITSNHWMMAWTGLEINTLAIIPLIS-KPHHPRAIEAATKYFLTQAAASALVLF--------------SSITNA 78
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgisllygatgslnlAGIAAA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 79 LASGQWDLTQLnhPLSSLLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMKL----PPLSILLLTSHMLNPTLI 154
Cdd:COG1007 192 LAAGGANSPLL--LLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAADWQ 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 155 NTLSIMSIA---LGGWMGLNQTQTRKILAFSSISHLGWMVIIIIYNPKLTL--LTFY--IYVLMTASIFLAL-----NTT 222
Cdd:COG1007 270 LLLAVLAVLsmtVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYllAYLFMNLGAFAVIlllsrKGG 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 218157261 223 NTLNLHTLITTWTKAPSLNTTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGLFFYLRLAY 298
Cdd:COG1007 350 EAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVVK 425
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.04e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 113.97 E-value: 1.04e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 13 LALGTTITITSNHWMMAWTGLEINTLAIIPLI-SKPHHPRAIEAATKYFLTQAAASALVLFS-------------SITNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 79 LASGQWDLTQLNHPLSSLLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMKLPPLSILLLTSHMLNPTLIntLS 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILLI--GG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 159 IMSIALGGWMGLNQTQTRKILAFSSISHLGWMVIII----IYNPKLTLLTFYIYVLMTASIF---LALNTTNTLnLHTLI 231
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFsiiLALNVYKNL-IIEFS 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 218157261 232 TTWTKAPSLNTTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGLFFYLRL 296
Cdd:MTH00196 239 GLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
6.10e-27 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 110.68 E-value: 6.10e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 14 ALGTTITITSNHWMMAWTGLEINTLAIIPLIS-KPHHPRAIEAATKYFLTQAAASALVL--------------FSSITNA 78
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLygmsllygatgslsFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 79 LASGQWDLTQLnhPLSSLLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMKLPPLSILLLTSHMLNPTL----- 153
Cdd:PRK05777 193 LADGSGNSLLL--LFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLVVAFGGLsedwq 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 154 --INTLSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMVIIIIYNPKLTL--LTFY--IYVLMTASIF--LALNTTNTL 225
Cdd:PRK05777 271 qvLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYllAYLFMTLGAFgvISLLRRKGG 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 218157261 226 NLHTlITTWT----KAPSLNTTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGLFFYLRL 296
Cdd:PRK05777 351 EAES-ISDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-271 |
2.56e-26 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 105.86 E-value: 2.56e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 23 SNHWMMAWTGLEINTLAIIPLI-SKPHHPRAIEAATKYFLTQAAASALVLFSSITNALASGQWDLTQL-----------N 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 91 HPLSSLLLTTAIAIKLGLVPFHFWFPETLQGAPLT-TALLLSTVMKLPPLSILLLTSHMLNPT-----LINTLSIMSIAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGGYGLIRRSLLYLPSSpfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 165 GGWMGLNQTQTRKILAFSSISHLGWMVIII----IYNPKLTLLTFYIYVLMTASIFLA-----LNTTNTLNLHTLITTWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCagsviYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|....*.
gi 218157261 236 KAPSLNTTLMLTLLSLAGLPPLTGFLPKWLTIQELV 271
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAV 276
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
10-296 |
5.44e-25 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 105.10 E-value: 5.44e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 10 IMSLALGTTITITSNHWMMAWTGLEINTLAIIPLIS-KPHHPRAIEAATKYFLTQAAASALVLFSSITNALASGQWDLTQ 88
Cdd:MTH00199 103 ILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQG 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 89 LNHPLSS----LLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMKLPPLSILLLTSHMLNPTLIntLSIMSIAL 164
Cdd:MTH00199 183 INSILTGdvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLI--CAVLSIIY 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 165 GGWMGLNQTQTRKILAFSSISHLGWMVIIIIYNP----KLTLLTFYIYVLMTA---SIFLALNTTNTLnLHTLITTWTKA 237
Cdd:MTH00199 261 GAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSfesiQASLIYMIIYVIMSIcsfSIILSLKLTKGL-IVEVSGLSRKN 339
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 218157261 238 PSLNTTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGLFFYLRL 296
Cdd:MTH00199 340 PVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
15-297 |
1.62e-24 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 103.49 E-value: 1.62e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 15 LGTTITITSNHWMMAWTGLEINTLAIIPLIS-KPHHPRAIEAATKYFLTQAAASALVLFSSITNALASGQWDLTQLNHPL 93
Cdd:TIGR01770 113 LGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 94 SS------------LLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMKLPPLSILL-------LTSHMLNPTLI 154
Cdd:TIGR01770 193 SNgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLrlflyilFGFSEAWQIFL 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 155 NTLSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMVIIIIYNPKLTL--LTFY--IYVLMTASIFLAL------NTTNT 224
Cdd:TIGR01770 273 AIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIkaVLFYifIYALMSLGAFGVLsllrsyKDEWI 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 218157261 225 LNLHTLITTWTKAPSLNTTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGLFFYLRLA 297
Cdd:TIGR01770 353 EYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-296 |
3.48e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 96.75 E-value: 3.48e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 13 LALGTTITITSNHWMMAWTGLEINTLAIIPLISKPHHPRAIEAATKYFLTQAAASALVLFSSITNALASGQWDLTQLNHP 92
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 93 LSSL----------LLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVM-KLPPLSILLLTSHMLNP-------TLI 154
Cdd:COG0651 196 LAELdpglllaafaLLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVYAILRVLTLLFGAdpalflgTLL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 155 NTLSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMVIII-IYNPKLTLLTFYIYV---LMTASIFLA----LNTTNTLN 226
Cdd:COG0651 276 LVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLgLGTPLGLAGALFHLLnhaLAKALLFLAagaiERATGTRD 355
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 227 LHTLITTWTKAPSLNTTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGLFFYLRL 296
Cdd:COG0651 356 LDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-296 |
1.24e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 77.98 E-value: 1.24e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 3 PFTKLISIMSLALGTTITITSNHWMMAWTGLEINTLAIIPLISKPHHPRAI---------EAATKYFLTQAAASALVLF- 72
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFg 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 73 ---------------SSITNALASGQWDLTQlnHPLSSLLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMKLp 137
Cdd:MTH00198 267 calyfgftgnegmlgTILSATLETTNIELRQ--GSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF- 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 138 pLSILLLTSHMLNPTLINTLSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMVIIIIYNPKLTLLTFYIY-VLMTASIF 216
Cdd:MTH00198 344 -TVYILLTSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYaVTYLVSAL 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 217 LALNTTNTLNLHTLITTWTKA------------------------PSLNTTLMLTLLSLAGLPPLTGFLPKWLTIQELVK 272
Cdd:MTH00198 423 ASFTVICTLEEFGTRTPTSRQrdgsfgnynlvrrlvdltilsrgqPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIK 502
|
330 340 350
....*....|....*....|....*....|.
gi 218157261 273 QEATPTATIIAMLSLLGL-------FFYLRL 296
Cdd:MTH00198 503 IAFSSSLSIYYLVALFAIictcisaFYYIRI 533
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-288 |
7.30e-15 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 75.12 E-value: 7.30e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 38 LAIIP---LISKPHHPRAIEAATKYFLTQAAASALVLFSSITNALASGQW--DLTQL-NHPLSS-------LLLTTAIAI 104
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELaAAPLPLtaqlllfLAFFIAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 105 KLGLVPFHFWFPETLQGAPLTTALLLSTVM-KLP-------PLSILLLTSHMLNPTLInTLSIMSIALGGWMGLNQTQTR 176
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAGVLlKMGgygllrfALPLFPEASAYFAPLLA-ALGVIGIIYGALVALAQTDLK 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 177 KILAFSSISHLGWMVI-IIIYNPK-LTLLTFYI--YVLMTASIFLAL----NTTNTLNLHTLITTWTKAPSLNTTLMLTL 248
Cdd:COG1008 301 RLIAYSSVSHMGFVLLgIFALNPLgLQGAVLQMvsHGLITAALFLLVgvlyDRTHTRDIADLGGLAKRMPVLAALFLLAA 380
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 218157261 249 LSLAGLPPLTGFLPKWLTIQELVKqeATPTATIIAMLSLL 288
Cdd:COG1008 381 LASLGLPGTSGFVGEFLVLLGAFQ--VNPWLAILAALGLI 418
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-336 |
2.25e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 73.76 E-value: 2.25e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 33 LEINTLAIIPLISKPHHPRAIEAATKYFLTQAAASALVLFSSITNALASGQWDLTQLNHPLSSL--------LLTTAIAI 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENptvvtafgFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 105 KLGLVPFHFWFPETLQGAPLTTALLLS-TVMKLPPLSILLLTSHMLNP---------TLINTLSIMSIALGGWMGLNQTQ 174
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPVVTALLSgLVTKVAVYALIRIYFTVFGGdfrfalglgWLLAVLALLSMLVGSLAALGQDD 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 175 TRKILAFSSISHLGWMVIIIIYNPKLTLL--TFYI--YVLMTASIFLALN----TTNTLNLHTLITTWTKAPSLNTTLML 246
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLAAGaievTYGTRRLSELSGLGRRMPLTAAAFAV 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 247 TLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGLFFYLRLAYCSTITLPPNSSNkmkQWSSKKPTATLTP 326
Cdd:PRK08375 375 ASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSE---APKQEAPLGMLAP 451
|
330
....*....|
gi 218157261 327 ALTSLSITLL 336
Cdd:PRK08375 452 SLALALLSLL 461
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-263 |
1.46e-13 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 71.19 E-value: 1.46e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 51 RAIEAATKYFLTQAAASALVLF---------------SSITNALASgqwdlTQLNHPLSSLL----LTTAIAIKLGLVPF 111
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYgfswlyglsggeielQEIVNGLIN-----TQMYNSPGISIalifITVGIGFKLSLAPF 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 112 HFWFPETLQGAPLTTALLLSTVMKLPPLSILLLTSHMLNPTLIN-------TLSIMSIALGGWMGLNQTQTRKILAFSSI 184
Cdd:CHL00049 234 HQWTPDVYEGSPTPVVAFLSVTSKVAASALATRIFDIPFYFSSNewhllleILAILSMILGNLIAITQTSMKRMLAYSSI 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 185 SHLGWMVIIII-------YNPKLTLLTFYIYV-LMT-ASIFLALNTTNTLNLHTLITTWTKAPSLNTTLMLTLLSLAGLP 255
Cdd:CHL00049 314 GQIGYVIIGIIvgdsndgYASMITYMLFYIFMnLGTfACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIP 393
|
....*...
gi 218157261 256 PLTGFLPK 263
Cdd:CHL00049 394 PLAGFFGK 401
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-288 |
5.67e-12 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 66.50 E-value: 5.67e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 50 PRAIEAATKYFLTQAAASALVLFSSITNA-LASGQWDLTQL-NHPLSS-------LLLTTAIAIKLGLVPFHFWFPETLQ 120
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYfLGGGTFDLLELlNLPLPFgvqtwlfLAFFIAFAVKVPLFPLHTWLPDAHV 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 121 GAPLTTALLLSTVM-KLPPLSILLL-------TSHMLNPTLInTLSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMVI 192
Cdd:TIGR01972 232 EAPTAGSVILAGVLlKMGTYGFLRFnlplfpdASLYFAPVLA-ALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 193 IIIYNPKLTLLTFYIYV----LMTASIFLALNT----TNTLNLHTLITTWTKAPSLNTTLMLTLLSLAGLPPLTGFLPKW 264
Cdd:TIGR01972 311 GIFSFNELGISGAVFQMishgLITAALFLLVGVlyerAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEF 390
|
250 260
....*....|....*....|....
gi 218157261 265 LTIQELVKqeATPTATIIAMLSLL 288
Cdd:TIGR01972 391 LILLGSFK--VNPVVAFLAALGIV 412
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
1.19e-11 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 65.46 E-value: 1.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 50 PRAIEAATKYFLTQAAASALVLF-SSITNALASGQWDLTQLNHPL---SSLLLTTA-------IAIKLGLVPFHFWFPET 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSAIALALitsPSLGLALAlvfviagIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 119 LQGAPLTTALLLSTVMKLP--PLSILLLTSHMLNPT-----LINTLSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMV 191
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAgfALAIRLLVTAFPSFDeqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 192 IIIIYNPK--LTLLTFY--IYVLMT----ASIFLALNTTNTLNLHTLITTWTKAPSLNTTLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK02504 317 IGLVAGTEagYASMVFYllAYLFMNlgafACVILFSLRTGTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
1.83e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 65.12 E-value: 1.83e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 33 LEINTLAIIPLIS-KPHHPRAIEAATKYFLTQAAASALVLFS---------SITNALASGQWDLTQLNHPLSSL-LLTTA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIALaLFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 102 IAIKLGLVPFHFWFPETLQGAP--LTTALLLSTVMKLPPLSILLLT--SHMLNPT----LINTLSIMSIALGGWMGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAAPssISAMLLVIKQAGLYALARVLFSiyGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 174 QTRKILAFSSISHLGWMV------IIIIYNPKLTLL--------TFYI--YVLMTASIFLA----LNTTNTLNLHTLITT 233
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMLlglgvgLAALGDPAMASYgeialaggIYHIvnHALYKALLFLTagavIYETGTRNLNELGGL 389
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 218157261 234 WTKAPSLNTTLMLTLLSLAGLPPLTGFLPKWLtIQELVKQeATPTATIIAML-SLLGLFFYLRLAY 298
Cdd:PRK08376 390 ARTMPKTTIAFLIGAAAIVGLPPFNGFASKWL-IYESSAL-FNPILGVIAMIgSVLTLASFVKVFH 453
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-194 |
2.52e-09 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 58.29 E-value: 2.52e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 50 PRAIEAATKYFLTQAAASALVLFSSIT----NALASGQWDLTQL-NHPLSS-------LLLTTAIAIKLGLVPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYlvvvYYNATGTFDIADLlNLPLPPgvqywlfLAFFIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 118 TLQGAPLTTALLLSTVM-KLPP-------LSILLLTSHMLNPTLInTLSIMSIALGGWMGLNQTQTRKILAFSSISHLGW 189
Cdd:PRK05846 237 AHVQAPTAGSVLLAGILlKMGAygllrfsLPLFPDASHEFAPIII-TLGVIAIIYGALVALAQTDIKKLIAYSSISHMGF 315
|
....*
gi 218157261 190 MVIII 194
Cdd:PRK05846 316 VTLGI 320
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-210 |
3.53e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 54.76 E-value: 3.53e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 13 LALGTTITITSNHWMMAWTGLEINTLAIIPLISKPHHPRAIEAATKYFLTQAAA------SALVLFSSITNALASGQWDL 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 87 TQLNHP----------LSSLLLTTAIAIKLGLVPFHFWFPETLQGAP-LTTALLLSTVMKLPPLSILLLTSHMLNPTLIN 155
Cdd:PRK08676 191 TELAAHasllspsvlgASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPsVVSALLSGTVLNIGIYGILRLSALLRQSGAAE 270
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 218157261 156 TLS-------IMSIALGGWMGLNQTQTRKILAFSSISHLGWMVIIIIYNPKLTLLTFYIYVL 210
Cdd:PRK08676 271 QFSnvliglgIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHML 332
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
1.75e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 52.73 E-value: 1.75e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 55 AATKYFLTQAAASALVLFSSITNALASGQ--WDLTQL---NHPLSSLLLT-----TAIAIKLGLVPFHFWFPETLQGAPL 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELgakSYPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 218157261 125 TTALLLSTVM-KLPPLSILLLTSHMLN-------PTLInTLSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMVIII 194
Cdd:PRK12561 218 PVSMILAGVLlKMGGYALIRFNVQMLPdahvyfaPALA-ILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGI 294
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
20-192 |
2.09e-07 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 52.24 E-value: 2.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 20 TITSNHWMMAWTGLEINTLAIIPLISKPHHPRAIEAATKYFLTQAAASALVLFSSI------TNALASGQ----W-DLTQ 88
Cdd:PRK06458 124 ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTIlvyanaATVMGDGEmailWtELLK 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 89 LNHPLSSLLLTTAIAI-------KLGLVPFHFWFPETLQGAPLTTALLLSTVMkLPPLSILLLTSHMLN---------PT 152
Cdd:PRK06458 204 HASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDAHSEAPSPVSALLSGVL-LNVALYAVLRYYILIdaaigsdfpGR 282
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 218157261 153 LINTLSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMVI 192
Cdd:PRK06458 283 LLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAF 322
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
80-283 |
2.93e-07 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 52.23 E-value: 2.93e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 80 ASGQWDLTQL-NHPLSSLLLTTAIAI-------KLGLVPFHFWFPETLQGAPLTTALLLSTVM---------KLPPLsil 142
Cdd:PRK12644 183 AAGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG--- 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 143 LLTSHMLNPTLInTLSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMVIIIIYNPK------LTLLTfyIYVLMTASIF 216
Cdd:PRK12644 260 FADVPVWRPTVL-VLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaalagLAMLL--AHALFKAALF 336
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 218157261 217 LAL----NTTNTLNLHTLITTWTKAPSLNTTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIA 283
Cdd:PRK12644 337 LVVgiidHSTGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALGPAGPVV 407
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
3.49e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 51.49 E-value: 3.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 33 LEINTLAIIPLISKPHHPRAIEAATKYFLTQAAASALVLFSSITNALASGQWDLTQLNH--PLSSLLLTTAIAIKLGLVP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 111 FHFWFPETLQGAPLTTALLLSTVMKLPPLSILLLTSHMLNPT--LINTLSIMSIALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLdlIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 189 WMVIIIIYNPKLTLltfyIYVLMTASIFLALNTTNTLNLHTLITTWTKAPsLNTTLMLTLLSLAGLPPLTGFLPKWLTIQ 268
Cdd:PRK07234 283 FILAAPLVGGLYAL----AHGLVKSTLFLCAGALPSRNFTELISQMLGIG-KWIPLTMASFSIAGFPLLAGFVSKVLTLK 357
|
...
gi 218157261 269 ELV 271
Cdd:PRK07234 358 NLL 360
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
96-298 |
1.57e-06 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 49.61 E-value: 1.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 96 LLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMK-------------LPPLSILLLTSHMLNPTLIN----TLS 158
Cdd:PRK08668 200 LFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSklgaygfllvlyvLPGTKLFSEFGTYRGVPLFNyilaWLG 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 159 IMSIALGGWMGLNQTQTRKILAFSSISHLGWMVIIIIYNPKLTLL--TFYI--YVLMTASIFLALNT----TNTLNLHTL 230
Cdd:PRK08668 280 NISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAggLFHVfnHALFKGLFFLIFAAviyrTGTTKISEM 359
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 218157261 231 ITTWTKAPSLNTTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGLFFYLRLAY 298
Cdd:PRK08668 360 GGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIGSFLYVFRPLA 427
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
55-291 |
5.65e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 48.19 E-value: 5.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 55 AATKYFLTQAAASALVLFSSITNALASGQWDLTQLNHP-----LSSLLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALL 129
Cdd:PRK08667 163 AGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASagilsLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSAL 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 130 LSTVM-KLPPLSILLLTSHMLNP-----TLINTLSIMSIALGGWMGLNQTQTRKILAFSSISHLG--------WMVIIII 195
Cdd:PRK08667 243 MSGVMlKVAVYGLVRFLMDVLSPelwwgVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVY 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 196 YNPKLTLLT-------------FYIYVLMTA-SIFLALNTTNTLNLHTLIttwTKAPSLNTTLMLTLLSLAGLPPLTGFL 261
Cdd:PRK08667 323 GLDTLALLAlggalfhslnhalFKSLLFLTAgSVVHATGTRNIEKMGGLV---KLMPYTSALFLVGAVSIAALPPFNGFA 399
|
250 260 270
....*....|....*....|....*....|..
gi 218157261 262 PKWLTIQELVK--QEATPTATIIaMLSLLGLF 291
Cdd:PRK08667 400 SELLLYESFFQsfSVADPLIKIL-LFSVLAIF 430
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
5.98e-06 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 43.02 E-value: 5.98e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 218157261 291 FFYLRLAYCSTITLPPNSSNKMKQWSSKKP-TATLTPALTSLSITLLPLSP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTkNTLLLPTLTTLSILLLPLTP 51
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-267 |
2.58e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 45.68 E-value: 2.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 101 AIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVM------KLPPLS--ILLLTSHMLNPTLInTLSIMSIALGGWMGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILlklggyGLVRLSwpILPLGAQNLAPAVI-AMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 173 TQTRKILAFSSISHLGwMVIIIIYNPKLTLLTFYIYVLM----TASIFLALNTTNTLNLHTLITTWTKA-----PSLNTT 243
Cdd:MTH00226 318 IDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIMLahgiVSSLLFILVTILYDRHHTRLIKYYRGlsitmPIWGTI 396
|
170 180
....*....|....*....|....
gi 218157261 244 LMLTLLSLAGLPPLTGFLPKWLTI 267
Cdd:MTH00226 397 MIVTSLANVAVPPSGNFIGEYLSI 420
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
98-304 |
3.04e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 45.80 E-value: 3.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 98 LTTAIAI--------KLGLVPFHFWFPETLQGAPLTTALLLSTVMKLPPLSILLLTSHML--NPT---LINTLSIMSIAL 164
Cdd:PRK12650 206 LTTVVAVliavaaftKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhdVAVwnwLLIIVGMITALM 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 165 GGWMGLNQTQTRKILAFSSISHLGWMVIIIIYNPKLTLLTFYIYV----LMTASIFLAL----NTTNTLNLHTLITTWTK 236
Cdd:PRK12650 286 GAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTlahaLFKSSLFMLIgvvdHQAGTRDIRRLGSLWRR 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 218157261 237 APSLNTTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEAtPTATIIAMLSLLGLFFYLRLAYCSTITL 304
Cdd:PRK12650 366 MPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPG-GNAGVVLLLVGAALGAVFTFAYSARLVL 432
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
5-292 |
4.02e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 45.11 E-value: 4.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 5 TKLISIMSLALGTTITI-TSNHWMMAWTGLEINTLAIIPLISKPHHPRAIEAATKYFLTQAAASALVLFS-----SITNA 78
Cdd:PRK12662 110 PSFYSAFLLCLGGLLGIlVSNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyAITGT 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 79 LASGqwDLTQLNHPLSS--------LLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLS-TVMKLPPLSI-------- 141
Cdd:PRK12662 190 LNMG--DMFLIIQDLPTnraiqigvLFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSgTSTKVMIYLIirivydvf 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 142 ---LLLTSHMLNPTLInTLSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMVIIIIYNPKLTLLTFYIYV----LMTAS 214
Cdd:PRK12662 268 kanFVFTTLPFNNVFM-ILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsIVKSA 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 215 IFLALNTT----NTLNLHTLITTWTKAPSLNTTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLLGL 290
Cdd:PRK12662 347 LFMVSGSIsyhfGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSV 426
|
..
gi 218157261 291 FF 292
Cdd:PRK12662 427 IY 428
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-292 |
4.56e-05 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 45.14 E-value: 4.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 48 HHPRAIEAATKYFLTQAA-----ASALVLFSSITnalasGQWDLTQLNHPLSSLL---LTTAIAI--------KLGLVPF 111
Cdd:COG1009 156 EKPSARRAARKAFLVTRVgdlglLLGILLLGAIA-----GTLNFSELLAAAPTILsspLLTLILLllllgafgKSAQFPL 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 112 HFWFPETLQGAPLTTALLLSTVMK------LPPLSILLLTSHMLNPTLInTLSIMSIALGGWMGLNQTQTRKILAFSSIS 185
Cdd:COG1009 231 HFWLPDAMEGPTPVSALLHAATMVkagvylLARLSPLFALSPVWLTVVA-IIGAITALFAALIALAQTDIKRVLAYSTVS 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 186 HLGWMVIIIiynpKLTLLTFYIYVLMTASIFLAL---------NTTNTLNLHTLITTWTKAPSLNTTLMLTLLSLAGLPP 256
Cdd:COG1009 310 QLGYMFLAL----GVGAYVAALFHLLTHAFFKALlflgagsviHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPP 385
|
250 260 270
....*....|....*....|....*....|....*.
gi 218157261 257 LTGFLPKWLTIQELVkqEATPTATIIAMLSLLGLFF 292
Cdd:COG1009 386 FAGFFSKEAILEAAL--EAGGLGPLLLAVALLGAFL 419
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
7.73e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 44.43 E-value: 7.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 48 HHPRAIEAATKYFLTQAAASALVLFSSITNALASGQWDLTQL-----------NHPL---SSLLLTTAIAIKLGLVPFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATIlqdselienikGHPLfliTLILIFIGAAAKSAQGPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 114 WFPETLQGAPLTTALLLSTVMKLPPLSILLLTSHMLNPT-----LINTLSIMSIALGGWMGLNQTQTRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 189 WMVIIIIYNPK------LTLLTFYI--YVLMTASIFL----ALNTTNTLNLHTLITTWTKAPSLNTTLMLTLLSLAGLPP 256
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLlnHATFKACLFLvagiVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*..
gi 218157261 257 LTGFLPK 263
Cdd:PRK12649 396 LNGFLSK 402
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
7-270 |
1.04e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 44.01 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 7 LISIMSLA-LGTTITITSNHWMM---AWTGLEINTLAIIPLISKPHHPRAIEAATKYFLTqaaasALVLFSSITNALASG 82
Cdd:PRK06459 74 LSSLYILTiLGMAIVLTSDNYLLflaGWEIMTIPSYVAIALTKKNKRPAFVFMAFGELST-----VLILAGFAWAFIISG 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 83 QWDLTQLNHPLSSLLLTTAIAIKLGLVPFHF--WFPETLQGAPLTTALLLSTVMKLPPLSILLLTSHMLNPTLINTLSIM 160
Cdd:PRK06459 149 TTNFSYLPSPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLT 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 161 -------SIALGGWMGLNQTQTRKILAFSSISHLGWMVI-----IIIYNPKLTLLTFYIYVLMTASIFLALNTT----NT 224
Cdd:PRK06459 229 ilaigafSILFGALYAYVSENVKGLLAFSTIENNGAILValglyMVTKQLITSIEHFSLITVILYSFAHSVAKTglflSS 308
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 218157261 225 LNLHTLITTWTKAP---SLNTTLMLTLLSLAGLPPLTGFLPKWLTIQEL 270
Cdd:PRK06459 309 GLQEKQSITYSKKIrnrWIELGLTLLASSLSGLLPNIGGVASWLLLESL 357
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
101-213 |
1.36e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 43.50 E-value: 1.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 101 AIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVM-KLP-------PLSILLLTSHMLNPtLINTLSIMSIALGGWMGLNQ 172
Cdd:MTH00217 215 SLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLlKLGgygfirfSWPLLPEASEYFSP-LIQTLSLLAIIYGSLTTCRQ 293
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 218157261 173 TQTRKILAFSSISHLGwMVIIIIYNPKLTLLTFYIYvLMTA 213
Cdd:MTH00217 294 VDLKRIIAYSSVAHMG-LVTLGIFSHTIQGLVAAIF-LMLA 332
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-291 |
1.49e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 43.42 E-value: 1.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 96 LLLTTAIAIKLGLVPFHFWFPETLQGAP-LTTALLLSTVMKLPPLSI-----LLLTSHMLNpTLINTLSIMSIALGGWMG 169
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYPTAPaPVTAVFAGLLTKVGVYAIirthtLLFPGGGLD-TLLMVVALLTMVVGILGA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 170 LNQTQTRKILAFSSISHLGWMVIIIIYNPKLTLLTFYIYV----LMTASIFLAL----NTTNTLNLHTLITTWTKAPSLN 241
Cdd:PRK12665 292 IAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVahhiTVQTTLFLVVglieRQAGSSSLRRLGGLAKASPLLA 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 218157261 242 TTLMLTLLSLAGLPPLTGFLPKWLTIQELVkQEATPTATII----AMLSLLGLF 291
Cdd:PRK12665 372 VLFFVPALNLGGIPPFSGFIGKVALLEAGA-EDGTWLAWALvaggVVTSLLTLY 424
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-289 |
2.16e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 42.98 E-value: 2.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 109 VPFHFWFPETLQGAPLTTALLLSTVMKlpPLSILLLTShmLNPTLINTLSIMSIAL---------GGWMGLNQTQTRKIL 179
Cdd:PRK12647 212 FPFHFWLPNAMEAPTPVSAYLHSATMV--KAGIYLLAR--LNPVLGGTPLWQTILPlfggltmltGALLAVRQTDLKLIL 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 180 AFSSISHLGWMVIIIIYNPKLTLLTFYIYV----LMTASIFLALNT----TNTLNLHTLITTWTKAPSLNTTLMLTLLSL 251
Cdd:PRK12647 288 AYSTVSALGTLVMLLGLGSELAIKAAVLFLvahsLYKGALFMVAGIidheTGTRDITKLGGLRRAMPITAAAALLAALSM 367
|
170 180 190
....*....|....*....|....*....|....*...
gi 218157261 252 AGLPPLTGFLPKWLTIQELVkqEATPTATIIAMLSLLG 289
Cdd:PRK12647 368 AGLPPLFGFLAKELIYEALL--EAPLWSLILTVAAVLG 403
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
101-188 |
2.86e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 42.36 E-value: 2.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 101 AIAIKLGLVPFHFWFPETLQGAPLTTALLLSTV-MKLP-------PLSILLLTSHMLNPtLINTLSIMSIALGGWMGLNQ 172
Cdd:MTH00204 218 SLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGIlLKLGgygflrfSWPLFPAASEYFAP-LIVMLSVIAVIYGSLTTCRQ 296
|
90
....*....|....*.
gi 218157261 173 TQTRKILAFSSISHLG 188
Cdd:MTH00204 297 VDFKRLIAYSSVAHMG 312
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
53-293 |
3.21e-04 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 42.24 E-value: 3.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 53 IEAATKYFLTQAAASALVL---------FSSITNALASGQWDLTQLNHPLS--SLLLTTAIAIKLGLVPFhFWFPETLQG 121
Cdd:PRK12663 157 LRGAIKYVVLNLIGSWLFLlgigllygtFGTLNMAHIAMRLNDMGDTATLTtiALLFLLAFGMKAALFPF-MWLPAAYHT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 122 APLTTALLLSTVMKLPPLSILLLTSHMLNP-------TLINTLSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMVI-I 193
Cdd:PRK12663 236 PNTEVAALFAALLTKVGIYALIRVFTLLFPqerellhPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLgL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 194 IIYNPK-LTLLTFY---IYVLMTASIFLA---LNTTNTLNLHTLITTWTKAPSLNTTLMLTLLSLAGLPPLTGFLPKWLT 266
Cdd:PRK12663 316 ALGTPAgINGAIFYlvhDMVVKTALFLIAgslVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLL 395
|
250 260 270
....*....|....*....|....*....|...
gi 218157261 267 IQELVKQEA------TPTATIIAMLSLLGLFFY 293
Cdd:PRK12663 396 VQGALDNGAyillalMLITSLITMYSLFRIFFL 428
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-203 |
3.43e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 42.38 E-value: 3.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 38 LAIIPL---ISKPHHPRAIEAATKYFLTQAAASALVLFSSITNALASG--QWDLTQLNH---PLSSLLLTTA-----IAI 104
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLRShtlPLSTQLLLLApilvgFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 105 KLGLVPFHFWFPETLQGAPLTTALLLSTVM-KLPPLSILLLTSHM-------LNPTLInTLSIMSIALGGWMGLNQTQTR 176
Cdd:PRK06473 218 KIPLVPFHTWLPDAHVEASTPVSVLLAGVLlKLGTYGLLRFGVGLfpeawvyLAPWLA-TWAVVSVLYGASCAIAQKDMK 296
|
170 180
....*....|....*....|....*..
gi 218157261 177 KILAFSSISHLGWMVIIIIYNPKLTLL 203
Cdd:PRK06473 297 KMVAYSSIGHMGYILLAAAAATPLSIL 323
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
93-292 |
5.33e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 41.56 E-value: 5.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 93 LSSLLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMKLPPLSILLLTSHMLNP--------TLINTLSIMSIAL 164
Cdd:PRK06277 200 GGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIFKLFGGlsyfpsaqGVLIALSVLAMVF 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 165 GGWMGLNQTQTRKILAFSSISHLGWMVIIIIYNPKLT----LLTFYIYVLMTASIFLA----LNTTNTLNLHTLITTWTK 236
Cdd:PRK06277 280 GVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGivagIFHAINHVIYKSALFLGagivSYRTKTSNLRKLGGLLPV 359
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 218157261 237 APSLNTTLMLTLLSLAGLPPLTGFLPKWLTIQELVkQEATPTATIIAMLSLLGLFF 292
Cdd:PRK06277 360 MPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAM-QANMPELAIIMIIVSIGTFV 414
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
82-277 |
1.77e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 40.20 E-value: 1.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 82 GQWDLTQLN-----HPLSS---LLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTV-MKLPPLSILLLTSHMLNPT 152
Cdd:PRK08042 162 GTLDLRLLDmrmqqLPLGSdiwLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAP 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 153 L-----INTLSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMVI--------IIIYNPKLTLLTFY--IYVLMTASIF- 216
Cdd:PRK08042 242 LwwgvaLLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLglgagvtgIALEQPALIALGLVggLYHLLNHSLFk 321
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 218157261 217 --LALNT------TNTLNLHTLITTWTKAPSLNTTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEATP 277
Cdd:PRK08042 322 svLFLGAgsvwfrTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFKLSNSG 390
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-288 |
6.15e-03 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 38.58 E-value: 6.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 110 PFHFWFPETLQGAPLTTALLLSTVMKLPPLSILLLTSHMLNPT-----LINTLSIMSIALGGWMGLNQTQTRKILAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 185 SHLGWMVIII------IYNPKLTLLTFYIYVLMtASIFLALN-----------------TTNTLNLHTLITTWTKAPSLN 241
Cdd:PRK12646 308 SQLGMIMAMVgigggyAQHQQDAIASIYVFVLF-AALFHLMNhaifkcalfmgvgiidhEAGTRDIRILSGMRQLFPKMN 386
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 218157261 242 TTLMLTLLSLAGLPPLTGFLPKWLTIQELVKQEATPTATIIAMLSLL 288
Cdd:PRK12646 387 LVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLSQFSLISMIIIV 433
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-296 |
6.40e-03 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 38.15 E-value: 6.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 55 AATKYFLTQAAASALVL--FSSITNALASGQWD---LTQLNHPLSS-LLLTTAI----AIKLGLVPFHFWFPETLQGAPL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLaaFLGIVWLSGSTSFDydaISTQNLSLNTqLILLTGLllgfGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 125 TTALLLSTVM-KLPPLSILLL-------TSHMLNPTLInTLSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMVIIIIY 196
Cdd:PRK07363 238 AVAILLGGVLaKLGTYGLLRFglqlfpqTWSLVAPGLA-IIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAA 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 197 NPKLTLLTfYIYVLMTASIFLAL------------NTTNTLNLHTLITTWTKAPSLNTTLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK07363 317 GTQLSLLG-AVAQMISHGLILALlfhlvgiverkvGTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVAEF 395
|
250 260 270
....*....|....*....|....*....|..
gi 218157261 265 LTIQELVKQEATPTATIIAMLSLLGLFFYLRL 296
Cdd:PRK07363 396 IVFQGSFSTFPIPTLLCIVASGLTAVYFVILL 427
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-194 |
6.58e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 38.15 E-value: 6.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 55 AATKYFLTQAAASALVLFSSITNALASG--QWDLTQL---NHPLSSLLLT-----TAIAIKLGLVPFHFWFPETLQGAPL 124
Cdd:PRK02546 166 AATKFILYTAGSSLFILLAALAMAFYGDtpTFDMTALaakDFGLGFQLLCyagllIAYGVKLPIVPLHTWLPDAHGEATA 245
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 218157261 125 TTALLLSTVM-KLPPLSILLLTSHML-------NPTLInTLSIMSIALGGWMGLNQTQTRKILAFSSISHLGWMVIII 194
Cdd:PRK02546 246 PVHMLLAGILlKMGGYALLRMNAGMLpdahaqfAPLLI-VLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGI 322
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
18-136 |
9.43e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 37.76 E-value: 9.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218157261 18 TITITSNHW---MMAW--TGLEINTLaiipLISKPHHPRAIEAATKYFLTQAAASALVLFSSITNALASGQWDLTQL--- 89
Cdd:PRK08168 114 HLLVLSDHLlvlIAAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALwah 189
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 218157261 90 ------NHPL--SSLLLTTAIAIKLGLVPFHFWFPETLQGAPLTTALLLSTVMKL 136
Cdd:PRK08168 190 laaqgaSPSLqaAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVVNL 244
|
|
| |
