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Conserved domains on  [gi|189095640|ref|YP_001936618|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Eremobates cf. palpisetulosus SEM-2008]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-302 6.92e-138

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 391.82  E-value: 6.92e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   1 MVELVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGL 80
Cdd:MTH00193   2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  81 MLSLCMWMVYPIEGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGV 160
Cdd:MTH00193  82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGS 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 161 YELFE*EVYQvSSGWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMIS 240
Cdd:MTH00193 162 FNLLDFMNYQ-KYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 189095640 241 AILYFGG---GLFIGLKLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIVGLVLI 302
Cdd:MTH00193 241 VLMFLGGdllSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIF 305
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-302 6.92e-138

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 391.82  E-value: 6.92e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   1 MVELVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGL 80
Cdd:MTH00193   2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  81 MLSLCMWMVYPIEGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGV 160
Cdd:MTH00193  82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGS 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 161 YELFE*EVYQvSSGWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMIS 240
Cdd:MTH00193 162 FNLLDFMNYQ-KYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 189095640 241 AILYFGG---GLFIGLKLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIVGLVLI 302
Cdd:MTH00193 241 VLMFLGGdllSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIF 305
NADHdh pfam00146
NADH dehydrogenase;
7-297 2.62e-94

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 281.28  E-value: 2.62e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640    7 VLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGLMLSLCM 86
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   87 WMVYPI--EGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGVYELF 164
Cdd:pfam00146  82 FAVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  165 E*EVYQvSSGWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMISAILY 244
Cdd:pfam00146 162 EIVEAQ-AGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 189095640  245 FGGG---------LFIGLKLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIV 297
Cdd:pfam00146 241 LGGWlgpfplpglLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-303 2.25e-90

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 272.00  E-value: 2.25e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   4 LVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGLMLS 83
Cdd:COG1005   12 LIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPA 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  84 LCMWMVYPI--EGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGVY 161
Cdd:COG1005   92 LLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSL 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 162 ELFE*EVYQVSSGWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMISA 241
Cdd:COG1005  172 NLSEIVEAQAGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALAT 251

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 189095640 242 ILYFGG---------------GLFIGLKLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIVGLVLIW 303
Cdd:COG1005  252 TLFLGGwlgpfpilplgglpgILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVLLF 328
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-302 6.92e-138

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 391.82  E-value: 6.92e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   1 MVELVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGL 80
Cdd:MTH00193   2 MMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  81 MLSLCMWMVYPIEGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGV 160
Cdd:MTH00193  82 FLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGS 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 161 YELFE*EVYQvSSGWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMIS 240
Cdd:MTH00193 162 FNLLDFMNYQ-KYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 189095640 241 AILYFGG---GLFIGLKLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIVGLVLI 302
Cdd:MTH00193 241 VLMFLGGdllSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIF 305
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-301 1.58e-122

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 353.19  E-value: 1.58e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   1 MVELVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGL 80
Cdd:MTH00225   1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  81 MLSLCMWMVYPIEGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGV 160
Cdd:MTH00225  81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 161 YELFE*EVYQvSSGWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMIS 240
Cdd:MTH00225 161 YNLFDFSYNQ-KYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLT 239

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 189095640 241 AILYFGGG-----LFIGLKLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIVGLVL 301
Cdd:MTH00225 240 SILFFGGFfvtidLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 1-300 4.66e-121

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 349.17  E-value: 4.66e-121
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   1 MVELVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGL 80
Cdd:MTH00143   1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  81 MLSLCMWMVYPIEGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGV 160
Cdd:MTH00143  81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 161 YELFE*EVYQVSSgWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMIS 240
Cdd:MTH00143 161 FSFIEISESQFSV-WLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLT 239

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 189095640 241 AILYFGG--------GLFIGLKLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIVGLV 300
Cdd:MTH00143 240 VVLFFGGssvlfllgGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVLV 307
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 1-302 2.91e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 322.24  E-value: 2.91e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   1 MVELVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGL 80
Cdd:MTH00218   2 LLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILAL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  81 MLSLCMWMVYPIEGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGV 160
Cdd:MTH00218  82 TLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGG 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 161 YELFE*EVYQvSSGWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMIS 240
Cdd:MTH00218 162 FSLEGFNLTQ-ETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 189095640 241 AILYFGGG---LFIGLKLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIVGLVLI 302
Cdd:MTH00218 241 VILFLGTSlttINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLS 305
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 1-301 1.09e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 315.53  E-value: 1.09e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   1 MVELVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGL 80
Cdd:MTH00195   2 MISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLAL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  81 MLSLCMWMVYPIEGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGV 160
Cdd:MTH00195  82 ALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGS 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 161 YELFE*EVYQvSSGWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMIS 240
Cdd:MTH00195 162 FDFTIMVISQ-GFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 189095640 241 AILYFGGG--LFIGLKLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIVGLVL 301
Cdd:MTH00195 241 TILFLGGGgtIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPF 303
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-290 6.75e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 311.54  E-value: 6.75e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   1 MVELVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGL 80
Cdd:MTH00134   6 ITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLAL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  81 MLSLCMWMVYPIEGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGV 160
Cdd:MTH00134  86 TLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGG 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 161 YELFE*EVYQvSSGWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMIS 240
Cdd:MTH00134 166 FTLQTFNTAQ-ESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLS 244

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 241 AILYFGGGLFIGL----------KLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCL 290
Cdd:MTH00134 245 AILFLGASHIPTLpelttinlmtKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTL 304
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-295 1.94e-105

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 310.40  E-value: 1.94e-105
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   1 MVELVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGL 80
Cdd:MTH00071   5 ISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMAL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  81 MLSLCMWMVYPIEGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGV 160
Cdd:MTH00071  85 TLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGG 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 161 YELFE*EVYQvSSGWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMIS 240
Cdd:MTH00071 165 FSLMNFNTTQ-EFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 189095640 241 AILYFGGGLF----------IGLKLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMF 295
Cdd:MTH00071 244 TILFLGSTYNhlqpelstmnLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIF 308
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 4-299 3.13e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 301.93  E-value: 3.13e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   4 LVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGLMLS 83
Cdd:MTH00104   3 MINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLA 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  84 LCMWMVYPIEGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGVYEL 163
Cdd:MTH00104  83 LTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTL 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 164 FE*EVYQVSSgWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMISAIL 243
Cdd:MTH00104 163 STLITTQEHL-WLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTIL 241

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 189095640 244 YFGGGLFIGL-KLFGFSFM---------YLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIVGL 299
Cdd:MTH00104 242 FLGAFHNPYMpELYTTNFTiktllltilFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISL 307
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-290 1.59e-101

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 300.27  E-value: 1.59e-101
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   1 MVELVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGL 80
Cdd:MTH00111   5 LLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILAL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  81 MLSLCMWMVYPIEGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGV 160
Cdd:MTH00111  85 LLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGG 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 161 YELFE*EVYQVSSgWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMIS 240
Cdd:MTH00111 165 YTLQTLATTQEPL-WLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 241 AILYFGGG-------LF---IGLKLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCL 290
Cdd:MTH00111 244 TILFLNPStlnlppeLFtinLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 2-302 1.21e-100

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 298.04  E-value: 1.21e-100
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   2 VELVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGLM 81
Cdd:MTH00040   5 LFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLF 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  82 LSLCMWMVYPIEGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGVY 161
Cdd:MTH00040  85 LALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSF 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 162 ELFE*EVYQVSSgWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMISA 241
Cdd:MTH00040 165 SLSSISNSQNGS-WLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSV 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 189095640 242 ILYFGGG-----------LFIGLKLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIVGLVLI 302
Cdd:MTH00040 244 ILFLGGGspfneifpiniIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSL 315
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 5-302 1.23e-99

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 295.15  E-value: 1.23e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   5 VNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGLMLSL 84
Cdd:MTH00010   7 ISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILAL 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  85 CMWMVYPIEGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGVYELf 164
Cdd:MTH00010  87 LLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSF- 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 165 e*EVYQVSSGWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMISAIL- 243
Cdd:MTH00010 166 -SKIIMSQYSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFf 244

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 189095640 244 ------YFGGGLFIGLKLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIVGLVLI 302
Cdd:MTH00010 245 tsfipsIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFL 309
NADHdh pfam00146
NADH dehydrogenase;
7-297 2.62e-94

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 281.28  E-value: 2.62e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640    7 VLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGLMLSLCM 86
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   87 WMVYPI--EGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGVYELF 164
Cdd:pfam00146  82 FAVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  165 E*EVYQvSSGWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMISAILY 244
Cdd:pfam00146 162 EIVEAQ-AGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLF 240

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 189095640  245 FGGG---------LFIGLKLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIV 297
Cdd:pfam00146 241 LGGWlgpfplpglLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLLTA 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 4-303 2.25e-90

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 272.00  E-value: 2.25e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   4 LVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGLMLS 83
Cdd:COG1005   12 LIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPA 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  84 LCMWMVYPI--EGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGVY 161
Cdd:COG1005   92 LLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSL 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 162 ELFE*EVYQVSSGWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMISA 241
Cdd:COG1005  172 NLSEIVEAQAGGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALAT 251

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 189095640 242 ILYFGG---------------GLFIGLKLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIVGLVLIW 303
Cdd:COG1005  252 TLFLGGwlgpfpilplgglpgILWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVLTAAVVLLF 328
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 3-301 4.22e-87

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 263.90  E-value: 4.22e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   3 ELVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGLML 82
Cdd:MTH00216   8 YLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTL 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  83 SLCMWMVYPIEG--LVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGV 160
Cdd:MTH00216  88 ALIVWGVIPYERgvLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGS 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 161 YELFE*EVYQVSSGWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMIS 240
Cdd:MTH00216 168 LSITEIVLAQNNGIWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLT 247

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 189095640 241 AILYFGGGL-----------FIGLKLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIVGLVL 301
Cdd:MTH00216 248 TILFLGGWLspikyfkggagWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLF 319
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 4-301 6.61e-82

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 250.41  E-value: 6.61e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   4 LVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGLMLS 83
Cdd:MTH00054   5 IIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  84 LCMWMVYPIEGLVV--DFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGVY 161
Cdd:MTH00054  85 FIAWGVIPYGEGVVlsDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSL 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 162 ELFE*EVYQvSSGWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMISA 241
Cdd:MTH00054 165 NLTEIVLAQ-KNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGV 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 189095640 242 ILYFGGGLFIGLKLFGFS-------------FMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIVGLVL 301
Cdd:MTH00054 244 ILFLGGWLVISGPTSYFSnfvwfgikialiiFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILI 316
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
4-299 2.10e-80

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 246.26  E-value: 2.10e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   4 LVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGLMLS 83
Cdd:PRK06076  13 LLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPA 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  84 LCMWMVYPI--EGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGVY 161
Cdd:PRK06076  93 FLAWAVIPFgpELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSL 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 162 ELFE*EVYQvSSGWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMISA 241
Cdd:PRK06076 173 NLSDIVEAQ-FLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALIT 251

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 189095640 242 ILYFGG-------------GLFIGLKLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIVGL 299
Cdd:PRK06076 252 TLFLGGwlppfplgggipgAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLLTAAV 322
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 5-301 6.72e-67

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 212.57  E-value: 6.72e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   5 VNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGLMLSL 84
Cdd:MTH00029  11 IKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAI 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  85 CMWMVYPIEG--LVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGVYE 162
Cdd:MTH00029  91 LAWAIVTMDQgvFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLN 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 163 LFE*EVYQvSSGWFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMISAI 242
Cdd:MTH00029 171 ISEIVISQ-RSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTI 249

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 243 LYFGG------GLFIGLKLFG--------------------FSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFI 296
Cdd:MTH00029 250 FFLGGwlspldGIPTPPEAFSifeqiasskssfwfftkssiFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILT 329


                 ....*
gi 189095640 297 VGLVL 301
Cdd:MTH00029 330 AGILI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 6-297 1.63e-64

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 204.36  E-value: 1.63e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   6 NVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGLMLSLC 85
Cdd:MTH00090   1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  86 MWMVYPIEGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGVYELFE 165
Cdd:MTH00090  81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 166 *evyqvssgwFILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSMISAILYF 245
Cdd:MTH00090 161 S---------FSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF 231

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 189095640 246 GGGLFIGLKLFgfsFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIV 297
Cdd:MTH00090 232 KFSFLMLFLIF---SLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFV 280
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 1-297 8.37e-52

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 172.03  E-value: 8.37e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   1 MVELVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETS-NLLIYYGCPVFg 79
Cdd:MTH00058   1 IFGLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSrSWFSLFGVFLL- 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  80 LMLSLCMWMVYPIEGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVG 159
Cdd:MTH00058  80 VLLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYG 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 160 VYELFE*evyqVSSGWFILGLLPLGLVWVSIC-LAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMSM 238
Cdd:MTH00058 160 SYSLVDF----YYSGWLSVLLFPLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSW 235

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 189095640 239 ISAILYFGGGLFIGLKLFGFsFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIV 297
Cdd:MTH00058 236 LGSVLFFGGGFVSIMLLFHL-LFFMWARATLPRVRYDYFVNFFWEYCLVLLILSLFVIV 293
ndhA CHL00032
NADH dehydrogenase subunit 1
 4-294 2.70e-35

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 130.84  E-value: 2.70e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   4 LVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPNSVGVVGILQPFADALKLFSKEQLLLETSNLLIYYGCPVFGLMLS 83
Cdd:CHL00032  30 LVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISI 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  84 LCMWMVYPI-EGLVV-DFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVGvy 161
Cdd:CHL00032 110 LLSYLVIPFgYHLVLaDLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSN-- 187

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 162 ELFE*EVYQVSSGWFILGL----LPLG-LVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGM 236
Cdd:CHL00032 188 SLSTVDIVEAQSKYGFWGWnlwrQPIGfIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVS 267

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 237 SMISAILYFGG---------------------------GLFIGL-KLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPL 288
Cdd:CHL00032 268 SLFVTVLYLGGwnlsipyifipelfeinktggvfgttiGIFITLaKTYLFLFISITTRWTLPRLRMDQLLNLGWKFLLPI 347


                 ....*.
gi 189095640 289 CLNYLM 294
Cdd:CHL00032 348 SLGNLL 353
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
1-297 6.86e-24

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 98.72  E-value: 6.86e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640   1 MVELVNVLILAVCVLVGVAFFTLLERKVLGYMQIRKGPnsvgvvGILQPFADALKLFSKEQLLLETSNLLIYYGCPV-FG 79
Cdd:COG0650    1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWLFRAAPYVaLA 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640  80 LMLSLCMWMVYPIEGLVVDFEFGILFFLVISGLGVYSIMGSGWSSNSKYALLGAYRSVAQTISSEVSMALVMIVIVVIVG 159
Cdd:COG0650   75 AMLLAALLVPVLTTGPPLSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAG 154

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 189095640 160 VYELFE*EVYQVSSGW--FILGLLPLGLVWVSICLAECNRAPFDFAEGESELVSGFNVEYGGGGFAMIFLAEYGSILGMS 237
Cdd:COG0650  155 STSLSDIVAYQAAHGPllLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLL 234

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 189095640 238 MISAILYFGGG---------LFIGLKLFGFSFMYLWVRGSFPRYRYDKLMNLAWKIYLPLCLNYLMFIV 297
Cdd:COG0650  235 SLFVNLFLPWGialtlllalLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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