|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00132 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
9.52e-126 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177190 Cd Length: 227 Bit Score: 354.95 E-value: 9.52e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 1 MTMNLFGQFSSPILMGIPLIAIALVIPWLLIPTSTSRWLNNRLLTLQNWFLGQFTSQLLSPINPGGHKWALLFTSLLLFL 80
Cdd:MTH00132 1 MTLSFFDQFMSPTYLGIPLIALALTLPWILFPTPTSRWLNNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSLMLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 81 ISLNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALGVR 160
Cdd:MTH00132 81 ITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 157736221 161 LTANLTAGHLLIQLIATAAFVLMPLMPTVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
Cdd:MTH00132 161 LTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
5-227 |
4.36e-48 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 157.75 E-value: 4.36e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 5 LFGQFSSP----ILMGIPLIAIALVIPWLLIPTSTSRWL-NNRLLTLQNWFLGQFTSQLLSPINPGGHKWALLFTSLLLF 79
Cdd:TIGR01131 1 LFSQFDISpitlFSLTLLSLILLLSLLIFLISSSLSRWLiPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 80 LISLNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALGV 159
Cdd:TIGR01131 81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 157736221 160 RLTANLTAGHLLIQLIATAAFVLMplMPTVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLM--SSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
83-224 |
3.05e-34 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 119.81 E-value: 3.05e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 83 LNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALGVRLT 162
Cdd:cd00310 18 SNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRLF 97
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 157736221 163 ANLTAGHLLIQLIATAAFVLMPLmptVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYLQ 224
Cdd:cd00310 98 ANMFAGHLLLALLSGLVPSLLSS---VGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
19-224 |
3.24e-30 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 111.04 E-value: 3.24e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 19 LIAIALVIPWLLIPTS-TSRWLNNRLLTLQNWFLGQFTSQLLSPINP-GGHKWALLFTSLLLFLISLNMLGLL---PYTF 93
Cdd:pfam00119 5 LIVALILLLFLLLATRkTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKkKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 94 TPTAQLSMNMGFAVPLWLATVILGMRNQPTVA-LGHLLPEGTPVPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLI 172
Cdd:pfam00119 85 TVTADINVTLALALIVFLLVHYYGIKKHGLGGyFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 157736221 173 QLIATAAFVLMPLMPTVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYLQ 224
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
84-225 |
2.90e-20 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 85.12 E-value: 2.90e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 84 NMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVA-LGHLLPEGTPvPLIPVLIIIETISLFIRPLALGVRLT 162
Cdd:COG0356 72 NLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKGLGGyLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLF 150
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 157736221 163 ANLTAGHLLIQLIATAAFVLMPLMPTVAILTTILLPLLTlleiaVAMIQAYVFVLLLSLYLQE 225
Cdd:COG0356 151 GNMFAGHIILLLLAGLAPFLLLGVLSLLLPVAWTAFELL-----VGFLQAYIFTMLTAVYISL 208
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| ATP6 |
MTH00132 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
9.52e-126 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177190 Cd Length: 227 Bit Score: 354.95 E-value: 9.52e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 1 MTMNLFGQFSSPILMGIPLIAIALVIPWLLIPTSTSRWLNNRLLTLQNWFLGQFTSQLLSPINPGGHKWALLFTSLLLFL 80
Cdd:MTH00132 1 MTLSFFDQFMSPTYLGIPLIALALTLPWILFPTPTSRWLNNRLLTLQGWFINRFTQQLLLPLNVGGHKWALLLTSLMLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 81 ISLNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALGVR 160
Cdd:MTH00132 81 ITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 157736221 161 LTANLTAGHLLIQLIATAAFVLMPLMPTVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
Cdd:MTH00132 161 LTANLTAGHLLIQLIATAAFVLLPLMPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSLYLQENV 227
|
|
| ATP6 |
MTH00073 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
3.36e-109 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177144 Cd Length: 227 Bit Score: 313.06 E-value: 3.36e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 1 MTMNLFGQFSSPILMGIPLIAIALVIPWLLIPTSTSRWLNNRLLTLQNWFLGQFTSQLLSPINPGGHKWALLFTSLLLFL 80
Cdd:MTH00073 1 MNLSFFDQFLSPTLLGIPLIMLAMLLPWLLFPTPTNKWLNNRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILTSLMVFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 81 ISLNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALGVR 160
Cdd:MTH00073 81 ITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 157736221 161 LTANLTAGHLLIQLIATAAFVLMPLMPTVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
Cdd:MTH00073 161 LTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
|
|
| ATP6 |
MTH00120 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
1.13e-100 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177181 Cd Length: 227 Bit Score: 291.34 E-value: 1.13e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 1 MTMNLFGQFSSPILMGIPLIAIALVIPWLLIPTSTSRWLNNRLLTLQNWFLGQFTSQLLSPINPGGHKWALLFTSLLLFL 80
Cdd:MTH00120 1 MNLNFFDQFSSPELLGIPLILLAMLIPALLIPSPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWALILTSLMLLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 81 ISLNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALGVR 160
Cdd:MTH00120 81 LLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 157736221 161 LTANLTAGHLLIQLIATAAFVLMPLMPTVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
Cdd:MTH00120 161 LTANLTAGHLLIQLISTATLNLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQENT 227
|
|
| ATP6 |
MTH00179 |
ATP synthase F0 subunit 6; Provisional |
1-227 |
9.99e-90 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177230 Cd Length: 227 Bit Score: 263.73 E-value: 9.99e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 1 MTMNLFGQFSSPILMGIPLIAIALVIPWLLIPTSTSRWLNNRLLTLQNWFLGQFTSQLLSPINPGGHKWALLFTSLLLFL 80
Cdd:MTH00179 1 MMLSMFDQFESPSLLGIPLLALALLLPWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 81 ISLNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALGVR 160
Cdd:MTH00179 81 LTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVR 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 157736221 161 LTANLTAGHLLIQLIATAAFVLMPLMPTVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
Cdd:MTH00179 161 LTANITAGHLLMHLISSAVFVLMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQENL 227
|
|
| ATP6 |
MTH00101 |
ATP synthase F0 subunit 6; Validated |
1-226 |
9.58e-75 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177163 Cd Length: 226 Bit Score: 225.60 E-value: 9.58e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 1 MTMNLFGQFSSPILMGIPLIAIALVIPWLLIPTSTsRWLNNRLLTLQNWFLGQFTSQLLSPINPGGHKWALLFTSLLLFL 80
Cdd:MTH00101 1 MNENLFASFITPTILGLPIVTLIIMFPSLLFPTPN-RLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWSLMLMSLILFI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 81 ISLNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALGVR 160
Cdd:MTH00101 80 GSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVR 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 157736221 161 LTANLTAGHLLIQLIATAAFVLMPLMPTVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYLQEN 226
Cdd:MTH00101 160 LTANITAGHLLIHLIGGATLALMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLYLHDN 225
|
|
| ATP6 |
MTH00035 |
ATP synthase F0 subunit 6; Validated |
1-227 |
1.22e-48 |
|
ATP synthase F0 subunit 6; Validated
Pssm-ID: 177110 Cd Length: 229 Bit Score: 158.98 E-value: 1.22e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 1 MTMNLFGQFSSPILMGIPLIAIALVIP--WLLIPTSTSrWLNNRLLTLQNWFLGQFTSQLLSPINPGGHKWALLFTSLLL 78
Cdd:MTH00035 3 INNSIFGQFSPDTILFIPLTLLSSVIAlsWLFFINPTN-WLPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 79 FLISLNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALG 158
Cdd:MTH00035 82 LILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALG 161
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 157736221 159 VRLTANLTAGHLLIQLIATAAFVLMPLmPTVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
Cdd:MTH00035 162 LRLAANLTAGHLLIFLLSTAIWELSNS-PLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQNI 229
|
|
| ATP_synt_6_or_A |
TIGR01131 |
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ... |
5-227 |
4.36e-48 |
|
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]
Pssm-ID: 273458 Cd Length: 226 Bit Score: 157.75 E-value: 4.36e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 5 LFGQFSSP----ILMGIPLIAIALVIPWLLIPTSTSRWL-NNRLLTLQNWFLGQFTSQLLSPINPGGHKWALLFTSLLLF 79
Cdd:TIGR01131 1 LFSQFDISpitlFSLTLLSLILLLSLLIFLISSSLSRWLiPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 80 LISLNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALGV 159
Cdd:TIGR01131 81 ILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSV 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 157736221 160 RLTANLTAGHLLIQLIATAAFVLMplMPTVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
Cdd:TIGR01131 161 RLFANISAGHLLLTLLSGLLFSLM--SSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
|
|
| ATP6 |
MTH00157 |
ATP synthase F0 subunit 6; Provisional |
1-225 |
1.95e-39 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214441 Cd Length: 223 Bit Score: 135.30 E-value: 1.95e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 1 MTMNLFGQFSSPILMGIPLIAIALVIPWLLIPTSTsrWL-NNRLLTLQNWFLGQFTSQLLSPINPGGHKWALLFTSLLLF 79
Cdd:MTH00157 1 MMTNLFSIFDPSTSFNLSLNWLSTFLGLLFIPSSF--WLiPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 80 LISLNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALGV 159
Cdd:MTH00157 79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 157736221 160 RLTANLTAGHLLIQLIATAAFVLMPLMptvAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMI---LSILILIQILLLILESAVAIIQSYVFSVLSTLYSSE 221
|
|
| ATP6 |
MTH00176 |
ATP synthase F0 subunit 6; Provisional |
1-226 |
1.95e-38 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214449 Cd Length: 229 Bit Score: 132.85 E-value: 1.95e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 1 MTMNLFGQFSSPILMGIPLIAIALVIPWL-LIPTSTSRWL-NNRLLTLQNWFLGQFTSQLLSPINPGGHKWALLFTSLLL 78
Cdd:MTH00176 1 MLVDLFSSFDPPNKNIFSMISLSWITLLLfLLLMPSSVWFcPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 79 FLISLNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALG 158
Cdd:MTH00176 81 LVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLA 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 157736221 159 VRLTANLTAGHLLIQLIATAAFVLMPLMPTVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYLQEN 226
Cdd:MTH00176 161 VRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEH 228
|
|
| ATP-synt_Fo_a_6 |
cd00310 |
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ... |
83-224 |
3.05e-34 |
|
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.
Pssm-ID: 349411 [Multi-domain] Cd Length: 156 Bit Score: 119.81 E-value: 3.05e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 83 LNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALGVRLT 162
Cdd:cd00310 18 SNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRLF 97
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 157736221 163 ANLTAGHLLIQLIATAAFVLMPLmptVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYLQ 224
Cdd:cd00310 98 ANMFAGHLLLALLSGLVPSLLSS---VGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
|
|
| ATP6 |
MTH00173 |
ATP synthase F0 subunit 6; Provisional |
1-225 |
1.25e-32 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214448 Cd Length: 231 Bit Score: 118.04 E-value: 1.25e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 1 MTMNLFGQFSSPILMGIPLIAIALVIP-WLLIPTSTSRWLN-NRLLTLQNWFLGQFTSQLLSPINPGGHKWALLFTSLLL 78
Cdd:MTH00173 1 MMVDLFSSFDDHNSSFSSLSFLMWLLSlMSLFFFSSSVWVSsSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 79 FLISLNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALG 158
Cdd:MTH00173 81 FLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLT 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 157736221 159 VRLTANLTAGHLLIQLIA-TAAFVLMPLMPTVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
Cdd:MTH00173 161 VRLLANISAGHIVLTLIGnYLSSSLFSSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
|
|
| ATP-synt_A |
pfam00119 |
ATP synthase A chain; |
19-224 |
3.24e-30 |
|
ATP synthase A chain;
Pssm-ID: 459679 [Multi-domain] Cd Length: 216 Bit Score: 111.04 E-value: 3.24e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 19 LIAIALVIPWLLIPTS-TSRWLNNRLLTLQNWFLGQFTSQLLSPINP-GGHKWALLFTSLLLFLISLNMLGLL---PYTF 93
Cdd:pfam00119 5 LIVALILLLFLLLATRkTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKkKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 94 TPTAQLSMNMGFAVPLWLATVILGMRNQPTVA-LGHLLPEGTPVPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLI 172
Cdd:pfam00119 85 TVTADINVTLALALIVFLLVHYYGIKKHGLGGyFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 157736221 173 QLIATAAFVLMPLMPTVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYLQ 224
Cdd:pfam00119 165 LLLAGLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
|
|
| ATP6 |
MTH00005 |
ATP synthase F0 subunit 6; Provisional |
2-222 |
1.34e-27 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 164583 Cd Length: 231 Bit Score: 104.81 E-value: 1.34e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 2 TMNLFGQFSSPILMGIPLIAIALvipwllipTSTSRWL-NNRLLTLQNWFLGQFTSQLLSPINPGGHKWALLFTSLLLFL 80
Cdd:MTH00005 13 TNSLFNNLSSTAFWAFNFSIILL--------LSSSFWItPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALFTMI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 81 ISLNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALGVR 160
Cdd:MTH00005 85 ILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFR 164
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 157736221 161 LTANLTAGHLLIQLIATAAFVLMPLMPTVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLY 222
Cdd:MTH00005 165 LAANMSAGHIVLSLIGIYAASALFSSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLY 226
|
|
| ATP6 |
MTH00172 |
ATP synthase F0 subunit 6; Provisional |
81-223 |
1.14e-25 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 214447 Cd Length: 232 Bit Score: 99.73 E-value: 1.14e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 81 ISLNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALGVR 160
Cdd:MTH00172 83 VFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVR 162
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 157736221 161 LTANLTAGHLLIQLIATAAFVLMPLMPTVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYL 223
Cdd:MTH00172 163 LAANLSAGHLLFAILAGFGFNMLCASGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYL 225
|
|
| ATP6 |
MTH00175 |
ATP synthase F0 subunit 6; Provisional |
83-227 |
8.73e-24 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177228 Cd Length: 244 Bit Score: 95.07 E-value: 8.73e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 83 LNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALGVRLT 162
Cdd:MTH00175 96 LNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLA 175
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 157736221 163 ANLTAGHLLIQLIATAAF-VLMPLMPTVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYLQENV 227
Cdd:MTH00175 176 ANISAGHLLFAILSGFAFnMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDTI 241
|
|
| AtpB |
COG0356 |
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ... |
84-225 |
2.90e-20 |
|
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase
Pssm-ID: 440125 [Multi-domain] Cd Length: 212 Bit Score: 85.12 E-value: 2.90e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 84 NMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVA-LGHLLPEGTPvPLIPVLIIIETISLFIRPLALGVRLT 162
Cdd:COG0356 72 NLLGLIPGLFPPTADINVTLALALIVFVLVHYYGIKKKGLGGyLKHLFFPPFP-WLAPLMLPIEIISELARPLSLSLRLF 150
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 157736221 163 ANLTAGHLLIQLIATAAFVLMPLMPTVAILTTILLPLLTlleiaVAMIQAYVFVLLLSLYLQE 225
Cdd:COG0356 151 GNMFAGHIILLLLAGLAPFLLLGVLSLLLPVAWTAFELL-----VGFLQAYIFTMLTAVYISL 208
|
|
| ATP6 |
MTH00174 |
ATP synthase F0 subunit 6; Provisional |
41-227 |
1.26e-16 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 133799 Cd Length: 252 Bit Score: 76.13 E-value: 1.26e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 41 NRLLTLQNWFLGQFTSQLLSPINPGGHKWALLFTSLLLFLISLNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRN 120
Cdd:MTH00174 62 NRILVGLELIYSHFYTVLKDNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLIT 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 121 QPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAAFVLMPLMPTV-AILTTILLPL 199
Cdd:MTH00174 142 FRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGILIgSFVPFAILIF 221
|
170 180
....*....|....*....|....*...
gi 157736221 200 LTLLEIAVAMIQAYVFVLLLSLYLQENV 227
Cdd:MTH00174 222 VTILEMAVAIIQAYVFTLLTIVYLRDTV 249
|
|
| PRK05815 |
PRK05815 |
F0F1 ATP synthase subunit A; Validated |
6-225 |
2.98e-16 |
|
F0F1 ATP synthase subunit A; Validated
Pssm-ID: 235617 Cd Length: 227 Bit Score: 74.45 E-value: 2.98e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 6 FGQFSSPILMGIPLIAIALVIPWLLIPTSTSRWLNNRLLTLQNWFLGQFTSQLLSPINPGGHKWALLFTSLLLFLISLNM 85
Cdd:PRK05815 9 FGGFNFDSLLLSVLLGVLILLLFALVATRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLMNL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 86 LGLLP-YTFTPTAQLSMNMGFAVPLWLATVILGMRNQptvALGHLLPEGTPVPlIPVLIIIETISLFIRPLALGVRLTAN 164
Cdd:PRK05815 89 LGLIPyLLFPPTADINVTLALALIVFVLVIYYGIKKK---GLGGYLKEFYLQP-HPLLLPIEIISEFSRPISLSLRLFGN 164
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 157736221 165 LTAGHLLIQLIATAAFVLMPLMPTVAILTTILLPLLTLleiaVAMIQAYVFVLLLSLYLQE 225
Cdd:PRK05815 165 MLAGELILALIALLGGAGLLLALAPLILPVAWTIFEIF----VGTLQAYIFMMLTIVYISM 221
|
|
| PRK13419 |
PRK13419 |
F0F1 ATP synthase subunit A; Provisional |
83-223 |
1.43e-12 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237381 Cd Length: 342 Bit Score: 65.53 E-value: 1.43e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 83 LNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETISLFIRPLALGVRLT 162
Cdd:PRK13419 184 CNLLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKAHGIKGYLAHLTGGTHWSLWIIMIPIEFIGLFTKPFALTVRLF 263
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 157736221 163 ANLTAGHLLIQLIATAAFVLMPLMPTVAILTTILLPLLTLLEIaVAMIQAYVFVLLLSLYL 223
Cdd:PRK13419 264 ANMTAGHIVILSLIFISFILKSYIVAVAVSVPFAIFIYLLELF-VAFLQAYIFTMLSALFI 323
|
|
| ATP6 |
MTH00087 |
ATP synthase F0 subunit 6; Provisional |
83-225 |
6.86e-12 |
|
ATP synthase F0 subunit 6; Provisional
Pssm-ID: 177152 Cd Length: 195 Bit Score: 61.92 E-value: 6.86e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 83 LNMLGLLPYTFTPTAQLSMNMGFAVPLWLATVILGMRNQptVALGHLLPEGTPVPLIP-VLIIIETISLFIRPLALGVRL 161
Cdd:MTH00087 65 FCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKS--EKFSVYLSKGSDSFLKTfSMLFVEIVSELSRPLALTLRL 142
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 157736221 162 TANLTAGHLLIQLIATAAFVLMPLMptvailttillPLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
Cdd:MTH00087 143 TVNLMVGHLISSLLNFLGEKYVWLS-----------ILAIMMECFVAFIQSYIFSRLIYLYLNE 195
|
|
| PRK13417 |
PRK13417 |
F0F1 ATP synthase subunit A; Provisional |
94-223 |
4.50e-09 |
|
F0F1 ATP synthase subunit A; Provisional
Pssm-ID: 237380 Cd Length: 352 Bit Score: 55.67 E-value: 4.50e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 157736221 94 TPTAQLSMNMGFAVPLWLATVILGMRNQPTVALGHLLPEGTPVPLIPVLIIIETI-SLFIRPLALGVRLTANLTAGHLLI 172
Cdd:PRK13417 217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 157736221 173 qlIATAAFVLMPLMPTVAILTTILLPLLTLLEIAVAMIQAYVFVLLLSLYL 223
Cdd:PRK13417 297 --LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLFV 345
|
|
|