|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
3-596 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 892.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 3 SLFSIAFVTTVSSIILVILPLVNTKSKVFHLTTKNAVKMAFFMSLPPLILFMSQKQTNTSANMKWFNLGITNLSFTTQFD 82
Cdd:MTH00066 2 NLMLIFNSSMILSLLLLILPLLLPKSNNFHTNVKTSVKTAFFISLIPLMIFINQGLESITTSFHWMNIFNFNINSSFKFD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 83 LYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSD 162
Cdd:MTH00066 82 QYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARAD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 163 AATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPHMLSS-SPSTILLIGFITAAASKSAQFGFHPWLASAMEGPTPVS 241
Cdd:MTH00066 162 ANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLnDNSTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 242 ALLHSSTMVVAGIFLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYL 321
Cdd:MTH00066 242 ALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQL 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 322 AFFHITTHAFFKAMLFLCSGLIIHSINDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHI 401
Cdd:MTH00066 322 AFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNL 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 402 NSMALLMTLVATAFTAVYSMRLIYFTTMTHARMTPVLLCDENDSRVLNPLTRLAIGTIAAGLLINNITLSNHPIIHSMPI 481
Cdd:MTH00066 402 NSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILTMPT 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 482 YMKLTALIVTVAAFTIAYDLAKVFWTNpTMNHGTKKYDPL--YFNQVIHRSSTNTTLNLAWHLITHLAESLLMKKFGPTH 559
Cdd:MTH00066 482 FMKLAALLVTLLGLLIALDLAKITSKT-TPKTKMHSFSNLlaFFPTIIHRLSPKTNLNSGQNIATHLTDMTWYEKSGPKG 560
|
570 580 590
....*....|....*....|....*....|....*..
gi 146149061 560 IETSQLLPIKVVHLTQTAQIKVYLSVLFITLICVTMV 596
Cdd:MTH00066 561 LTNQQLPPIKTITNIQTGLIKTYLTLFLITLLLMLIL 597
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-595 |
0e+00 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 761.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 1 MPSLFSIAFVTTVSSIIL-VILPLVNTKSKVFHLTTKNAVKMAFFMSLPPLILFMSQKQTNTSANMKWFNLGITNLSFTT 79
Cdd:MTH00004 1 MTLLLNTTTLLTLLILLTpILLPLLSKNLKNSPTTIKTTVKLAFLISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 80 QFDLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSA 159
Cdd:MTH00004 81 KLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 160 RSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPHMLSSSP-STILLIGFITAAASKSAQFGFHPWLASAMEGPT 238
Cdd:MTH00004 161 RAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFSPTQtPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 239 PVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNM 318
Cdd:MTH00004 241 PVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQ 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 319 PYLAFFHITTHAFFKAMLFLCSGLIIHSINDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAAST 398
Cdd:MTH00004 321 PQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNT 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 399 SHINSMALLMTLVATAFTAVYSMRLIYFTTMTHARMTPVLLCDENDSRVLNPLTRLAIGTIAAGLLINNITLSNHPIIHS 478
Cdd:MTH00004 401 SYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTKTPPMT 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 479 MPIYMKLTALIVTVAAFTIAYDLakvfwTNPTMNHGTKKYDPL--------YFNQVIHRSSTNTTLNLAWHLITHLAESL 550
Cdd:MTH00004 481 MPTTTKLAALIVTILGILLALEL-----SNMTTTLTPPKQNTLhnfsnqlaFFNPLTHRLLPMTLLKSSQKIATHLIDLS 555
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
gi 146149061 551 LMKKFGPTHIETSQLLPIKVVHLTQTAQIKVYLSVLFITLICVTM 595
Cdd:MTH00004 556 WLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLTSFALTILLLLL 600
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
14-596 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 743.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 14 SSIILV----ILPLVNT------KSKVFHLTTKNAVKMAFFMSLPPLILFMSQKQTNTSANMKWFNLGITNLSFTTQFDL 83
Cdd:MTH00137 9 SSLILIfallIYPLLTTlspnpqKPNWALTHVKTAVKTAFFVSLLPLFLFLNQGAETIITNWNWMNTLTFDINISFKFDH 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 84 YTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDA 163
Cdd:MTH00137 89 YSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADA 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 164 ATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPHMLSSSPS---TILLIGFITAAASKSAQFGFHPWLASAMEGPTPV 240
Cdd:MTH00137 169 NTAALQAVIYNRVGDIGLILAMAWMATNLNSWEIQQIFALSKDfdlTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 241 SALLHSSTMVVAGIFLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPY 320
Cdd:MTH00137 249 SALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQ 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 321 LAFFHITTHAFFKAMLFLCSGLIIHSINDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSH 400
Cdd:MTH00137 329 LAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSH 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 401 INSMALLMTLVATAFTAVYSMRLIYFTTMTHARMTPVLLCDENDSRVLNPLTRLAIGTIAAGLLI-NNITLSNHPIIhSM 479
Cdd:MTH00137 409 LNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLItSNILPLKTPVM-TM 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 480 PIYMKLTALIVTVAAFTIAYDLA----KVFWTNPTMNhgTKKYDPL--YFNQVIHRSSTNTTLNLAWHLITHLAESLLMK 553
Cdd:MTH00137 488 PPLLKLAALIVTILGLLIALELAsltnKQFKPTPTLP--PHHFSNMlgFFPAIIHRLTPKLNLTLGQTIATQMVDQTWLE 565
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 146149061 554 KFGPTHIETSQLLPIKVVHLTQTAQIKVYLSVLFITLICVTMV 596
Cdd:MTH00137 566 KTGPKGIASLQLPLITTTSNIQQGMIKTYLTLFLLTLALATLL 608
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
11-596 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 696.22 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 11 TTVSSIILVILPLVNT-----KSKVFHLTTKNAVKMAFFMSLPPLILFMSQKQTNTSANMKWFNLGITNLSFTTQFDLYT 85
Cdd:MTH00108 7 STLLTLLILTLPIIMTltnpyKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSFKLDYFS 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 86 IIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAAT 165
Cdd:MTH00108 87 MIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANT 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 166 AALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPH--MLSSSPSTILLIGFITAAASKSAQFGFHPWLASAMEGPTPVSAL 243
Cdd:MTH00108 167 AALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQifMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSAL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 244 LHSSTMVVAGIFLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYLAF 323
Cdd:MTH00108 247 LHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAF 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 324 FHITTHAFFKAMLFLCSGLIIHSINDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINS 403
Cdd:MTH00108 327 LHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNA 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 404 MALLMTLVATAFTAVYSMRLIYFTTMTHARMTPVLLCDENDSRVLNPLTRLAIGTIAAGLLI-NNITLSNHPIIhSMPIY 482
Cdd:MTH00108 407 WALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLIsNNIPPTTIPQM-TMPLY 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 483 MKLTALIVTVAAFTIAYDLakvfwTNPTMNHGTKKYDPL--------YFNQVIHRSSTNTTLNLAWHLITHLAESLLMKK 554
Cdd:MTH00108 486 LKLTALAVTILGFILALEL-----NLLTNNLKFKYPSNTfkfsnmlgYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 146149061 555 FGPTHIETSQLLPIKVVHlTQTAQIKVYLSVLFITLICVTMV 596
Cdd:MTH00108 561 ILPKTISLIQMKASTTIS-NQKGLIKLYFLSFLITLTLSLLL 601
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
16-596 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 620.43 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 16 IILVILPLVNTKSKVFHLTTKNAVKMAFFMSLPPLILFMSQKQTNTSANMKWFNLGITNLSFTTQFDLYTIIFLPVAFLV 95
Cdd:MTH00211 12 ILILLLLPLLLPLNNSKLHIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYV 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 96 TWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQAVLYNR 175
Cdd:MTH00211 92 TWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNR 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 176 LGDIGFLLTLCWLMKNTQSIELPHML-SSSPSTILLIGFITAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGI 254
Cdd:MTH00211 172 IGDIGLLLSMVWLLLNLNSWEISQLFiLNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGV 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 255 FLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYLAFFHITTHAFFKA 334
Cdd:MTH00211 252 FLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKA 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 335 MLFLCSGLIIHSINDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLMTLVATA 414
Cdd:MTH00211 332 MLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATS 411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 415 FTAVYSMRLIYFTTMTHARMTPVLLCDENDSRVLNPLTRLAIGTIAAGLLINNITLSNHPIIHSMPIYMKLTALIVTVAA 494
Cdd:MTH00211 412 LTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILSLPFLLKLMPLLVTIVG 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 495 FTIAYDLAKVFWTNPTMNHGTKKYDPLYFNQVIHRSSTNTTLNLAWHLITHLAESLLMKKFGPTHIETSQLLPIKVVHLT 574
Cdd:MTH00211 492 LLLGLELVNLTHKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSP 571
|
570 580
....*....|....*....|..
gi 146149061 575 QTAQIKVYLSVLFITLICVTMV 596
Cdd:MTH00211 572 QQGLIKSYLALLLLSLLLILLL 593
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
44-594 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 542.25 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 44 FMSLPPLILFMSQKQTNTSANMK-WFNLGITNLSFTTQFDLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLI 122
Cdd:MTH00208 67 FLSLINLLIWILLGCPNINISLSnWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLII 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 123 FLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPHMLS 202
Cdd:MTH00208 147 FLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILS 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 203 -----SSPSTILLIGFITAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALTICLCL 277
Cdd:MTH00208 227 lnnsnSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLIL 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 278 GALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYLAFFHITTHAFFKAMLFLCSGLIIHSINDEQDIRKMG 357
Cdd:MTH00208 307 GSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMG 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 358 GLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLMTLVATAFTAVYSMRLIYFTTMTHARMTPV 437
Cdd:MTH00208 387 GLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPL 466
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 438 LLCDENDSRVLNPLTRLAIGTIAAGLLINNITLSNHPIIhsMPIYMKLTALIVTVAAFTIAYDLAKVFWTNPTM-NHGTK 516
Cdd:MTH00208 467 SPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLPPLT--LPLILKSLPLIVTIIGAAFSFSFLLSLSSNPINsNFFSF 544
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 146149061 517 KYDPLYFNQVIHRSSTNTTLNLAWHLITHLAESLLMKKFGPTHIETSQLLPIKVVHLTQTAQIKVYLsvLFITLICVT 594
Cdd:MTH00208 545 LSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYL--LSSTLLFLL 620
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
16-499 |
6.64e-131 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 396.84 E-value: 6.64e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 16 IILVILPLV----------NTKSKVFHLTTKNAVKMAFFMSLPPLILFMSQKQTNTSAN-MKWFNLGITNLSFTTQFDLY 84
Cdd:PRK06590 6 WLIVLLPLIgalilglfgrRIGEKWAHLVGTGLVGLSALLSLVVFFDFLLGGGRAFSQTlWTWISVGDFDVDFGLRVDGL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 85 TIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAA 164
Cdd:PRK06590 86 SATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAG 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 165 TAALQAVLYNRLGDIGFLLTLCWLMKNTQSIE-------LPHMLSSSPSTILLIG---FItAAASKSAQFGFHPWLASAM 234
Cdd:PRK06590 166 AAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNydevfaaAPQFFGLGWSALTLIClllFI-GAMGKSAQFPLHTWLPDAM 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 235 EGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAI 314
Cdd:PRK06590 245 EGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLAL 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 315 GLNMPYLAFFHITTHAFFKAMLFLCSGLIIHSINDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIE 394
Cdd:PRK06590 325 GVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILE 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 395 AASTSHiNSMALLMTLVATAFTAVYSMRLIYFT-------TMTHARMTPVLlcdendsrVLNPLTRLAIGTIAAGLLINN 467
Cdd:PRK06590 405 AAFANG-HINLFVAGLVGAFLTAFYSFRLIFLVfhgkekeKIHHPHESPAV--------MTLPLIVLAVLSVFAGALIVP 475
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 146149061 468 ITLSNHPII---------HSMPIYMKLTALIVTVAAFTIAY 499
Cdd:PRK06590 476 PFLGVLPLTtelahgeaeHHLPVWVALLPLVVALAGIALAW 516
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
42-499 |
2.04e-129 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 392.59 E-value: 2.04e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 42 AFFMSLPPLILFMSQKQTNTSANmkWFNLGITNLSFTTQFDLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLL 121
Cdd:COG1009 41 AFVLSLLLFPAVLGGEVVVELYT--WIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 122 IFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPHML 201
Cdd:COG1009 119 LFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELL 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 202 SSSPS-------TILLIGFITAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALTIC 274
Cdd:COG1009 199 AAAPTilsspllTLILLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVV 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 275 LCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYLAFFHITTHAFFKAMLFLCSGLIIHSINdEQDIR 354
Cdd:COG1009 279 AIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG-TRDIR 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 355 KMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLMTLVATAF-TAVYSMRLIYFTTMTHAR 433
Cdd:COG1009 358 KMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGAFlTAFYSFRLFFLVFFGKPR 437
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 146149061 434 MTPVLLCDENDSRVLNPLTRLAIGTIAAGL--------LINNITLSNHPIIHSMPIYMKLTALIVTVAAFTIAY 499
Cdd:COG1009 438 PKTPKHPHESPWLMTLPLVVLAVLSLVLGLllpgllegLLAPAAVLGGELHLAHGLLLNALPLLLSLLGIALGY 511
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
66-527 |
2.22e-119 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 366.71 E-value: 2.22e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 66 KWFNLGITNLSFTTQFDLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEG 145
Cdd:MTH00020 63 RWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEG 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 146 VGIMSFLLIGWYSARSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPH---MLSSSPST----ILLIGFItAAA 218
Cdd:MTH00020 143 VGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSvfnMVVSAPSSditlICLFLFI-GAV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 219 SKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKI 298
Cdd:MTH00020 222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKV 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 299 IAYSTSSQLGLMMVAIGLNMPYLAFFHITTHAFFKAMLFLCSGLIIHSINDEQDIRKMGGLQHALPMTTTCLSIGSLALM 378
Cdd:MTH00020 302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLM 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 379 GTPFLAGFYSKDAIIEAASTSHINSMALLMTLVATAFTAVYSMRLIY--FTTMTHARMTPVLLCDENDSRVLNPLTRLAI 456
Cdd:MTH00020 382 GFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYltFLSNTNLKKAVFFHLHEGDWNLLLPLGILAL 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 457 GTIAAGLLINNITLSNH----PIIHS----MPIYMKLTALIVtvaAFTIAYDLAKvFWTNPTMNHGTKKYDPLY----FN 524
Cdd:MTH00020 462 GSIFVGYLAKEMIWSFQitlpPIVPLsiklLPVFLSLGGIGL---VIILYFYSSK-TFRVPFSFIGRNSYTFLGsawqFN 537
|
...
gi 146149061 525 QVI 527
Cdd:MTH00020 538 YIL 540
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
16-499 |
8.13e-119 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 365.07 E-value: 8.13e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 16 IILVILPLV----------NTKSKVFHLTTKNAVKMAFFMSLPPLILFM--SQKQTNTSANMKWFNLGITNLSFTTQFDL 83
Cdd:TIGR01974 4 FLIVFLPLIgfliaglfgrRIGERVSGIIGIGSVGLSAALSAFVFVDFFlnGEGEAFTQSLFPWISVGGFQVDFGLRLDG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 84 YTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDA 163
Cdd:TIGR01974 84 LSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 164 ATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPHMLSSSPS------TILLIGFITAAASKSAQFGFHPWLASAMEGP 237
Cdd:TIGR01974 164 NNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFALAPGaffsalTLICLLLFIGAMGKSAQLPLHTWLPDAMEGP 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 238 TPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLN 317
Cdd:TIGR01974 244 TPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVG 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 318 MPYLAFFHITTHAFFKAMLFLCSGLIIHSINDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAAS 397
Cdd:TIGR01974 324 AYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAF 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 398 TSHINSMALLMTLVATAFTAVYSMRLIYFTTMTHARMTPVLLCDENDSRVLNPLTRLAIGTIAAGLLINNI--------- 468
Cdd:TIGR01974 404 ASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLfeflkgvlp 483
|
490 500 510
....*....|....*....|....*....|..
gi 146149061 469 -TLSNHPIIHSMPIYMKLTALIVTVAAFTIAY 499
Cdd:TIGR01974 484 tSAEPALEHHHVPALEIWSPTAVAILGILLAY 515
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
66-545 |
8.83e-116 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 357.40 E-value: 8.83e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 66 KWFNLGITNLSFTTQFDLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEG 145
Cdd:MTH00210 63 RWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEG 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 146 VGIMSFLLIGWYSARSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIE-------LPHMLSSSPSTILLIGFITAAA 218
Cdd:MTH00210 143 VGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEfstisslLVTNINKESLTIICLLLFIGAV 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 219 SKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKI 298
Cdd:MTH00210 223 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKV 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 299 IAYSTSSQLGLMMVAIGLNMPYLAFFHITTHAFFKAMLFLCSGLIIHSINDEQDIRKMGGLQHALPMTTTCLSIGSLALM 378
Cdd:MTH00210 303 IAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLM 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 379 GTPFLAGFYSKDAIIEAASTSHINSMALLMTLVATAFTAVYSMRLIYFT--TMTHARMTPVLLCDENDSRVLNPLTRLAI 456
Cdd:MTH00210 383 GFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTfiTNTNSKKEVFIGVHESSWNITFPLLLLAF 462
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 457 GTIAAGLLINNITLSN--HPIIhsmPIYMKLTALIVTVAAFTIA---YDLAKVFWTNPTMNHGTKKYDPLY--------F 523
Cdd:MTH00210 463 GSIFVGYLGKEVVLSNviPPIV---PNSIKMIPLLFSLLGALLAfviYNSMVFLIKISRRGVSIRLYHVIYtflnsawqF 539
|
490 500
....*....|....*....|..
gi 146149061 524 NQVIHRSSTNTTLNLAwHLITH 545
Cdd:MTH00210 540 NYVINHFIVKNIWKFG-HLITY 560
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
41-495 |
5.61e-105 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 327.96 E-value: 5.61e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 41 MAFFMSLPPLILFMSQKQTNTSANMKWFNLGITNLSFTTQFDLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYL 120
Cdd:MTH00151 12 FSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLV 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 121 LIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSArSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPhM 200
Cdd:MTH00151 92 MLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQN-KKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSILS-M 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 201 LSSSPSTILLIGFITAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALTICLCLGAL 280
Cdd:MTH00151 170 WDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLL 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 281 STFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYLAFFHITTHAFFKAMLFLCSGLIIHSINDEQDIRKMGGLQ 360
Cdd:MTH00151 250 TLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLF 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 361 HALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLMTLVATAFTAVYSMRLIYFTTMTHARMTPVLLC 440
Cdd:MTH00151 330 LSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSK 409
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 146149061 441 DENDSRVLNPLTRLAIGTIAAGLLINNITLSNHPIIHsMPIYMKLTALIVTVAAF 495
Cdd:MTH00151 410 SDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFF-LPSYLKLLIGFVILLGL 463
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
43-490 |
5.81e-102 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 320.17 E-value: 5.81e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 43 FFMSLPPLILFMSQKQTNTSANMKW--FNLGITNLSFTTQFDLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYL 120
Cdd:MTH00165 12 FFLSLILFFLGLYFLLNDYSLFIEWelFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLV 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 121 LIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSaRSDAATAALQAVLYNRLGDIGFLLTLCWLMKN---TQSIEL 197
Cdd:MTH00165 92 LLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQ-NKKSYNAGMLTALSNRIGDVAILLSIAWMMNFgswNFIFYL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 198 PHMLSSSPSTILLIGFITAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLaLTICLCL 277
Cdd:MTH00165 171 DFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFF-SKFLLLI 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 278 GALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYLAFFHITTHAFFKAMLFLCSGLIIHSINDEQDIRKMG 357
Cdd:MTH00165 250 SLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMG 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 358 GLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLMTLVATAFTAVYSMRLIYFTTMTHARMTPV 437
Cdd:MTH00165 330 GLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSL 409
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 146149061 438 LLCDENDSRVLNPLTRLAIGTIAAGLLINNITLSNHPIIhSMPIYMKLTALIV 490
Cdd:MTH00165 410 NNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMI-CLPFYLKLLTLFV 461
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
68-505 |
3.78e-96 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 305.03 E-value: 3.78e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 68 FNLGITNLSFTTQFDLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVG 147
Cdd:MTH00209 37 LSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLG 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 148 IMSFLLIGWYSaRSDAATAALQAVLYNRLGDIGFLLTLCW-LMKNTQSIELPHMLSSSPSTILLIgFITAAASKSAQFGF 226
Cdd:MTH00209 117 LVSYLLVIYYQ-NSKSLSAGMLTALTNRVGDALLILSIAWmLMHGNWNIFYLNFNSNLGSVISVL-IVLAAMTKSAQIPF 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 227 HPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQ 306
Cdd:MTH00209 195 SAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQ 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 307 LGLMMVAIGLNMPYLAFFHITTHAFFKAMLFLCSGLIIHSINDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGF 386
Cdd:MTH00209 275 LGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGF 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 387 YSKDAIIEAASTSHINSMALLMTLVATAFTAVYSMRLIYFTTMTHARMTPVLLCDENDSRVLNPLTRLAIGTIAAGLLIN 466
Cdd:MTH00209 355 YSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMS 434
|
410 420 430
....*....|....*....|....*....|....*....
gi 146149061 467 NITLSNHPIIhSMPIYMKLTALIVTVAAFTIAYDLAKVF 505
Cdd:MTH00209 435 WVMVPSVNSV-VLPWFLKLLPIMLILFGVLLMYMVLKKN 472
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
34-509 |
7.34e-96 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 304.38 E-value: 7.34e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 34 TTKNAVKMAFFMSLPPLILFMSQKQTNTSANMKW--FNLGITNLSFTTQFDLYTIIFLPVAFLVTWSILEFSTWYMQTDP 111
Cdd:MTH00207 6 PSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWeiFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 112 HMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQAvLYNRLGDIGFLLTLCWLMKN 191
Cdd:MTH00207 86 FLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITA-LTNRIGDVMLLLSIGWTLNQ 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 192 TQSIeLPHMLSSSPSTILLIGFITAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLAL 271
Cdd:MTH00207 165 GHWS-ITNMWQTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFN 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 272 TICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYLAFFHITTHAFFKAMLFLCSGLIIHSINDEQ 351
Cdd:MTH00207 244 PALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQ 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 352 DIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLMTLVATAFTAVYSMRLIYFTTMTH 431
Cdd:MTH00207 324 DLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSP 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 432 ARMTPVLLCDENDSRVLNPLTRLAIGTIAAGLLINNITLSN--HPIIhsmPIYMKLTALIVTVAAFTIAYDLAKVFWTNP 509
Cdd:MTH00207 404 NSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPqeEPIL---PLQYKLLPLLVVTLGALLAWLFTTPNITKT 480
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
66-485 |
2.68e-86 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 282.23 E-value: 2.68e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 66 KWFNLGITNLSFTTQFDLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEG 145
Cdd:MTH00032 63 KWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEG 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 146 VGIMSFLLIGWYSARSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIEL---------------------PHMLSSS 204
Cdd:MTH00032 143 VGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFltfnggsvgsgimdrgyygggAYESPLA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 205 PSTILLIGFITAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALTICLCLGALSTFF 284
Cdd:MTH00032 223 PFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFF 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 285 AASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPY-LAFFHITTHAFFKAMLFLCSGLIIHSIN-DEQDIRKMGGLQHA 362
Cdd:MTH00032 303 AATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHS 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 363 LPMTTTCLSIGSLALMGTPFLAGFYSKDAIIE------------------------------------AASTSHINSMAL 406
Cdd:MTH00032 383 IPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEltysgrnmgipfgssllkiqgdigikkddrgsiggpEGYPSRGSAFAF 462
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 407 LMTLVATAFTAVYSMRLIYFTTMTHARMTPVLLCDEN----DSRVLNPLTRLAIGTIAAGLLINNITLSN--HPI----I 476
Cdd:MTH00032 463 WLGTVAALLTAFYSIRLVYITFIISPNSPKESLISSHinivDKRVLTVLSLLCFGAIFVGYLIQDILIGDieHPIvpplI 542
|
....*....
gi 146149061 477 HSMPIYMKL 485
Cdd:MTH00032 543 KVMPTLMGL 551
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
91-428 |
6.34e-85 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 278.45 E-value: 6.34e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 91 VAFLVtwsiLEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQA 170
Cdd:PRK07376 103 VALLV----MIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKA 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 171 VLYNRLGDIGFLLTLCWLMKNTQSIELPHM------------LSSSPSTILLIGFITAAASKSAQFGFHPWLASAMEGPT 238
Cdd:PRK07376 179 FVVNRVGDFGLLLGILGLFWATGSFDFDGIadrlselvssgaVSGWLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPT 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 239 PVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNM 318
Cdd:PRK07376 259 PISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGA 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 319 PYLAFFHITTHAFFKAMLFLCSGLIIHSIND--------EQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKD 390
Cdd:PRK07376 339 YSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKD 418
|
330 340 350
....*....|....*....|....*....|....*...
gi 146149061 391 AIIEAASTShiNSMALLMTLVATAFTAVYSMRLiYFTT 428
Cdd:PRK07376 419 EILGAAFEA--NPALWFVGFLTAGMTAFYMFRM-YFLT 453
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
31-428 |
6.29e-62 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 218.22 E-value: 6.29e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 31 FHLTTKNAVKMAFFMSLPPLILFM------SQKQTNTSANMKWFNLGITNLSFTTQF----DLYTIIFL----PVAFLVt 96
Cdd:CHL00025 29 FPTATKNLRRMWAFPSILLLSIVMifslnlSIQQINGSSIYQYLWSWTINNDFSLEFgyliDPLTSIMLilitTVGILV- 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 97 wsiLEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQAVLYNRL 176
Cdd:CHL00025 108 ---LIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRV 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 177 GDIGFLL---TLCWLmknTQSIE-------LPHMLSSSPSTILLIGFITA-----AASKSAQFGFHPWLASAMEGPTPVS 241
Cdd:CHL00025 185 GDFGLLLgilGFYWI---TGSFEfrdlfeiFNNLIYNNEVNLLFATLCAFllflgPVAKSAQFPLHVWLPDAMEGPTPIS 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 242 ALLHSSTMVVAGIFLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYL 321
Cdd:CHL00025 262 ALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRA 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 322 AFFHITTHAFFKAMLFLCSGLIIHSI--------NDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAII 393
Cdd:CHL00025 342 ALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL 421
|
410 420 430
....*....|....*....|....*....|....*.
gi 146149061 394 eaaSTSHINSMAL-LMTLVATAFTAVYSMRlIYFTT 428
Cdd:CHL00025 422 ---NDSWLYSPIFaIIAWSTAGLTAFYMFR-IYLLT 453
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
99-414 |
7.82e-61 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 215.17 E-value: 7.82e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 99 ILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQAVLYNRLGD 178
Cdd:PRK12647 80 IVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGG 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 179 IGFLLTLCWLMKNTQSIELPHMLSSS----------PSTILLIGfitAAASKSAQFGFHPWLASAMEGPTPVSALLHSST 248
Cdd:PRK12647 160 LALLAGLILLGNVTGTYSLSELLASGdvirehplylAILLLVLG---GAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSAT 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 249 MVVAGIFLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYL---AFFH 325
Cdd:PRK12647 237 MVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAikaAVLF 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 326 ITTHAFFKAMLFLCSGLIIHSINdEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMA 405
Cdd:PRK12647 317 LVAHSLYKGALFMVAGIIDHETG-TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEAPLWSLI 395
|
....*....
gi 146149061 406 LLMTLVATA 414
Cdd:PRK12647 396 LTVAAVLGN 404
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
105-425 |
1.18e-55 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 202.73 E-value: 1.18e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 105 WYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQAVLYNRLGD----IG 180
Cdd:PRK12648 98 YYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAGGlallAG 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 181 FLLtlcwLMKNTQSIELPHMLSSS---------PSTILLIGFitAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVV 251
Cdd:PRK12648 178 VLL----LGHIVGSYDLDVVLAAGdlirahplyPPALVLILL--GAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVK 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 252 AGIFLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPY---LAFFHITT 328
Cdd:PRK12648 252 AGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLaavAAIFHIIN 331
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 329 HAFFKAMLFLCSGLIIHsindE---QDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAII-EAASTSHINSM 404
Cdd:PRK12648 332 HATFKASLFMAAGIIDH----EtgtRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFaETLDTHLLGSL 407
|
330 340
....*....|....*....|....
gi 146149061 405 ALLMTLVAT---AFTAVYSMRLIY 425
Cdd:PRK12648 408 DWLLPVAATlagAFSVAYSLRFIH 431
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
109-464 |
1.65e-53 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 196.68 E-value: 1.65e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 109 TDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQAVLYNRLGDIGFLLTLCWL 188
Cdd:PRK12644 101 DEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIIL 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 189 MKNTQSIELPHMLSSSPSTIL--------LIGfitaAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRI 260
Cdd:PRK12644 181 GQAAGTYRLSELLADPPTGPAvsvavvliLVG----ALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARL 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 261 HPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYLAFFHIT---THAFFKAMLF 337
Cdd:PRK12644 257 APGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAmllAHALFKAALF 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 338 LCSGLIIHSINdEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLMTLVA----T 413
Cdd:PRK12644 337 LVVGIIDHSTG-TRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALGPAGPVVLAGivlgS 415
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 146149061 414 AFTAVYSMRLIY--FTTMTHARMTPVllcDENDSRV----LNPLTRLAIGTIAAGLL 464
Cdd:PRK12644 416 ILTVAYSLRFLWgaFARKPGAFPSVA---VTEMHRPsplfLAPPAVLAVLGLVLGLL 469
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
133-407 |
4.38e-53 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 182.90 E-value: 4.38e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 133 AGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELP-------HMLSSSP 205
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDelskaltGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 206 STILLIGFITAAASKSAQFGFHPWLASA-MEGPTPVSALLhSSTMVVAGIFLLIRIHPLLSHNSLALT-ICLCLGALSTF 283
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIQqILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 284 FAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPY---LAFFHITTHAFFKAMLFLCSGLIIHSINDEQDIRKMGGLQ 360
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 146149061 361 HALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALL 407
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLA 286
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
43-426 |
6.13e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 189.36 E-value: 6.13e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 43 FFMSLPPLILFMSqkqtntSANMKWFNLGITNLSFTTQFDLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLI 122
Cdd:MTH00095 11 FFFFLLLFILFLP------FMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 123 FLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSaRSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPHMLS 202
Cdd:MTH00095 85 FVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYN-NWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSSYYFFSFSFFS 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 203 SSPSTILLIGFITaaasKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHpLLSHNSLALTICLCLGALST 282
Cdd:MTH00095 164 SSMILMLLLTSFT----KSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFS-YLILNMNVMKIMLLIGLFTM 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 283 FFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYLAFFHITTHAFFKAMLFLCSGLIIHSINDEQDIRKMGGLQHA 362
Cdd:MTH00095 239 FFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNL 318
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 146149061 363 LPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLMTLVATAFTAVYSMRLIYF 426
Cdd:MTH00095 319 PMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKS 382
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
82-427 |
3.05e-52 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 184.97 E-value: 3.05e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 82 DLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARs 161
Cdd:COG0651 75 DRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK- 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 162 DAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPHM------LSSSPSTILLIGFITAAASKSAQFGFHPWLASAM- 234
Cdd:COG0651 154 EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarlaeLDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYp 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 235 EGPTPVSALLhSSTMVVAGIFLLIRIHPLLSHNSLAL---TICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMM 311
Cdd:COG0651 234 AAPSPVSALL-SGLLTKVGVYAILRVLTLLFGADPALflgTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYIL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 312 VAIGLNMPYL---AFFHITTHAFFKAMLFLCSGLIIHSINdEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYS 388
Cdd:COG0651 313 LGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVS 391
|
330 340 350
....*....|....*....|....*....|....*....
gi 146149061 389 KDAIIEAASTSHINSMALLMtLVATAFTAVYSMRLIYFT 427
Cdd:COG0651 392 KWLLLQAALEAGAWLLAAVL-LLSSLLTLAYFVRIFGRA 429
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
61-424 |
2.89e-50 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 186.11 E-value: 2.89e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 61 TSANMKWFNLGITNLSFttQFDLYTIIFLPVAFLVTWSILEFSTWYMQTD-PHMGQFFKYLLIFLLAMITLVSAGNLLIL 139
Cdd:PRK12646 58 LSTSIPWMKTLDINLDL--RLDGLSLMFSLIISLIGIAVFFYATQYLSSRkDNLPRFYFYLTLFMFSMIGIVLSDNTILM 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 140 FTGWEGVGIMSFLLIGWYSARSDAATAALQAVLYNRLGDIGFL--LTLCWLMKNTQSI----ELPHMLSSSPSTI-LLIG 212
Cdd:PRK12646 136 YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLvgFIMLYIMTGTNNIteilGQADHIKNHGLFIpMIFM 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 213 FITAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQ 292
Cdd:PRK12646 216 FLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQ 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 293 NDIKKIIAYSTSSQLGLMMVAIGLNMPYL-----------------AFFHITTHAFFKAMLFLCSGLIIHSINdEQDIRK 355
Cdd:PRK12646 296 WDLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvlfaALFHLMNHAIFKCALFMGVGIIDHEAG-TRDIRI 374
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 146149061 356 MGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSK----DAIIEAASTSHIN----SMALLMTLVATAFTAVYSMRLI 424
Cdd:PRK12646 375 LSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKemflDALTQTGQLSQFSlismIIIVFIGVIASIFTFTYALYMV 451
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
113-427 |
2.99e-50 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 185.90 E-value: 2.99e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 113 MGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQAVLYNRLGDIGFL--LTLCWLMK 190
Cdd:PRK12645 109 LGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLggFILLYIMT 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 191 NTQSI-ELPHM---LSSSPSTIL-LIGFITAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLS 265
Cdd:PRK12645 189 GSFSIrEMIANadeIQNSPLFIPaMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFA 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 266 HNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYL----------------AFFHITTH 329
Cdd:PRK12645 269 GSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINH 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 330 AFFKAMLFLCSGLIIHSINdEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEA---ASTSHINSMAL 406
Cdd:PRK12645 349 ATFKGSLFMIVGIVDHETG-TRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESmlnATEANLFSLDT 427
|
330 340
....*....|....*....|....*..
gi 146149061 407 LMTL------VATAFTAVYSMRLIYFT 427
Cdd:PRK12645 428 WGVLfpviawVASVFTFVYSIIFIFKT 454
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
99-424 |
3.28e-49 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 183.11 E-value: 3.28e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 99 ILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQAVLYNRLGD 178
Cdd:PRK12649 96 IMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGG 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 179 IGFLLTLCWLMKNTQSIELPHMLSSSPST----------ILLIGFITAAASKSAQFGFHPWLASAMEGPTPVSALLHSST 248
Cdd:PRK12649 176 LFMFAGFLLLHVITGTYDIATILQDSELIenikghplflITLILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSAT 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 249 MVVAGIFLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPY-------L 321
Cdd:PRK12649 256 MVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYHepglgvaA 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 322 AFFHITTHAFFKAMLFLCSGLIIHSINdEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAA---ST 398
Cdd:PRK12649 336 ATFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSvemGA 414
|
330 340
....*....|....*....|....*....
gi 146149061 399 SHINSMALLMTLVATA---FTAVYSMRLI 424
Cdd:PRK12649 415 LIGGPFTIIIPAVAVLggvFTFAYSIKLI 443
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
75-439 |
2.58e-47 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 178.31 E-value: 2.58e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 75 LSFTTQFDLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLI 154
Cdd:PRK12650 71 VNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 155 gwysARS--DAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPHMLSSSP-------STILLIGFITAAASKSAQFG 225
Cdd:PRK12650 151 ----ARSgsGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVwaekpglTTVVAVLIAVAAFTKSAQFP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 226 FHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSS 305
Cdd:PRK12650 227 FHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 306 QLGLMMVAIGLNMPY---LAFFHITTHAFFKAMLFLCSGLIIHSINdEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPF 382
Cdd:PRK12650 307 QLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQAG-TRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPP 385
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 146149061 383 LAGFYSKDAIIEAASTSHINSMALLMTLVATA----FTAVYSMRLIY------FTTMTHARMTPVLL 439
Cdd:PRK12650 386 LFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAAlgavFTFAYSARLVLgafvdgPRDMSHVKEAPVSL 452
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
114-420 |
5.62e-44 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 163.61 E-value: 5.62e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 114 GQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSdAATAALQAVLYNRLGDIGFLLTLCWLMKNTQ 193
Cdd:PRK06525 113 GRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPK-ALRSALKALLITHIGSLGLYLAAATLFLQTG 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 194 SIELPHM--LSSSPSTILLIGFITAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIhpLLSHNSLAL 271
Cdd:PRK06525 192 TFALSALsgLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQSMGPIPH 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 272 TI---CLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNM--PYLAF----FHITTHAFFKAMLFLCSGL 342
Cdd:PRK06525 270 VIgyvGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAIlgSRLALegsiAYIFNHAFAKSLFFLVAGA 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 146149061 343 IIHSINdEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLMTLVATAFTAVYS 420
Cdd:PRK06525 350 LSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIESVAS 426
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
67-425 |
4.80e-40 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 154.68 E-value: 4.80e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 67 WFNLGITNLSFTTQFDLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGV 146
Cdd:PRK07390 73 WLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEIL 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 147 GIMSFLLIGWYSARSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPHM--------LSSSPSTILLIGFITAAA 218
Cdd:PRK07390 153 TLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLaawaatanLDPLTATLLGLALIAGPT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 219 SKSAQFGFHPWLASAMEGPTPVSaLLHSSTMVVAGIFLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKI 298
Cdd:PRK07390 233 GKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRA 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 299 IAYSTSSQLGLMMVAIGLNMPYLAFFHITTHAFFKAMLFLCSGLIIHSINDeQDIRKMGGLQHALPMTTTCLSIGSLALM 378
Cdd:PRK07390 312 LSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTTIT-QDLTELGGLWSRMPATTLAFLVGSAGLV 390
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 146149061 379 GTPFLAGFYSKDAIIEAASTSHINSMA-LLMTLVATAFTAVYSMRLIY 425
Cdd:PRK07390 391 ALLPLGGFWALLRLADGLWAVSPWLVGvLLLVNALTAFNLTRVFRLVF 438
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
82-425 |
4.29e-34 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 135.87 E-value: 4.29e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 82 DLYTIIFLPVAFLVTWSILEFSTWYMQtDPHMGQFFKYLLIFLLA-MITLVSAGNLLILFTGWEGVGIMSFLLIGWYSAR 160
Cdd:PRK12667 81 DLLGALLGLLTALVMFLILIYSYWYLE-HESGPEWYYTLLLGLEAgMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDR 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 161 SDAATAALQAVLYNRLGDIGFLLTLCWL--------MKN----TQSIELPHMLSSSPSTILLIGFITAAAS-----KSAQ 223
Cdd:PRK12667 160 GDAVEAAIKYALIGAVGTTLYFLALAFLyatfgtlnMADlsakIRGLSFPLTGGLAGNPPLALGVALALALwaftiKAAI 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 224 FGFHPWLASAM-EGPTPVSALLhSSTMVVAGIFLLIRI--------HPLLSHNSLALTICLCLGALSTFFAASYALTQND 294
Cdd:PRK12667 240 FPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgisPSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 295 IKKIIAYSTSSQLGLMMVAIGLNMPYL---AFFHITTHAFFKAMLFLCSGLIIHSINdEQDIRKMGGLQHALPMTTTCLS 371
Cdd:PRK12667 319 VKRLLAYSTISHMGYIFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASFAFL 397
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 146149061 372 IGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLMtLVATAFTAVYSMRLIY 425
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL-LIASAISLVGYFRAWY 450
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
94-341 |
1.61e-33 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 134.44 E-value: 1.61e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 94 LVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQAVLY 173
Cdd:PRK08168 80 LLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIA 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 174 NRLGDIgFLLT---LCWLMKNTQSIE--LPHMLSSSPSTILLIG---FITAAASKSAQFGFHPWLASAMEGPTPVSALLH 245
Cdd:PRK08168 160 DRLAEL-LLLAaaaLAYLEVGSLSLSalWAHLAAQGASPSLQAAallLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLH 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 246 SSTMVVAGiFLLIRIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYLAFFH 325
Cdd:PRK08168 239 AGVVNLGG-FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLH 317
|
250
....*....|....*.
gi 146149061 326 ITTHAFFKAMLFLCSG 341
Cdd:PRK08168 318 LVAHSLYKAHAFLSAS 333
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
82-425 |
4.55e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 129.61 E-value: 4.55e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 82 DLYTIIFLPVAFLVTWsileFSTWYMQTDPHMGQFFKYLLIFLL--AMITLVSAGNLLILFTGWEGVGIMSFLLIGwYSA 159
Cdd:PRK08375 76 DSLSALFLLVTSILAI----AALLYAIGYGEHRQTRFYALFLLLlaGLLGALLTADLFNLFVFLEIMSLSSYALVA-MGG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 160 RSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQS---IELPHMLSSSPSTILLIGFI-TAAASKSAQFGFHPWLASAME 235
Cdd:PRK08375 151 DRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTlnmADLAGALAENPTVVTAFGFVlLALALKAAVFPLHTWLPRAYP 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 236 GPTPVSALLHSSTMVVAGIFLLIRI-----HPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLM 310
Cdd:PRK08375 231 AAPPVVTALLSGLVTKVAVYALIRIyftvfGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYI 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 311 MVAIGLN---MPYLAFFHITTHAFFKAMLFLCSGLIIHSINdEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFY 387
Cdd:PRK08375 311 LLGLALLtplALAAGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFV 389
|
330 340 350
....*....|....*....|....*....|....*....
gi 146149061 388 SKDAIIEAAstSHINSMALLMTLVATAFTAVYSM-RLIY 425
Cdd:PRK08375 390 SKWYLVVGA--VEAGQWLVLAVLLASSLLALLYFlRIWY 426
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
82-425 |
3.97e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 127.52 E-value: 3.97e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 82 DLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARS 161
Cdd:PRK08376 89 DLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTW 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 162 DAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIE---LPHMLSSSPST---ILLIGFITAAASKSAQFGFHPWLASAM- 234
Cdd:PRK08376 169 EAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNmayLAVKMSENPTVvakIALALFIAGLAMKSGAVPVHMWLPDAYp 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 235 EGPTPVSALLHSSTmvVAGIFLLIRIHPLLSHNSLALT----ICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLM 310
Cdd:PRK08376 249 AAPSSISAMLLVIK--QAGLYALARVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYM 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 311 MVAIGLNMPYL---------------AFFHITTHAFFKAMLFLCSGLIIHSINdEQDIRKMGGLQHALPMTTTCLSIGSL 375
Cdd:PRK08376 327 LLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFLIGAA 405
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 146149061 376 ALMGTPFLAGFYSKDAIIEaaSTSHINSMALLMTLVATAFTAVYSMRLIY 425
Cdd:PRK08376 406 AIVGLPPFNGFASKWLIYE--SSALFNPILGVIAMIGSVLTLASFVKVFH 453
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
68-423 |
4.19e-28 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 118.44 E-value: 4.19e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 68 FNLGITNLSFTTQFDLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVG 147
Cdd:MTH00063 30 LSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLG 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 148 IMSFLLIGWYSArSDAATAALQAVLYNRLGDIGFLLTLCWLMkNTQSIELPHMLssspsTILLIGFitaaaSKSAQFGFH 227
Cdd:MTH00063 110 VVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFLLIGLSC-WGGSGSFLCCL-----FFFLIVF-----TKSASFPFI 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 228 PWLASAMEGPTPVSALLHSSTMVVAGIFLLIRiHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQL 307
Cdd:MTH00063 178 SWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDYLLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNI 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 308 GLMMVAIGLNMPYLAFFHITTHAFFKAMLFLCSG-LIIHSindeqdirkmGGLQHALPMTTTCLS-----IGS----LAL 377
Cdd:MTH00063 257 SWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGdVMSGS----------GGSQSSNCVYSSILYgswnlFYLfllvLGL 326
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 146149061 378 MGTPFLAGFYSKDAIIEAASTSHINSMALLMTLVATAFTAVYSMRL 423
Cdd:MTH00063 327 SGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRL 372
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
116-425 |
9.70e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 116.59 E-value: 9.70e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 116 FFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGwYSARSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSI 195
Cdd:PRK07234 96 FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTF 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 196 ELPHMLSSSPSTILLIgfITAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALTIcl 275
Cdd:PRK07234 175 AFSGLATADPEAFALI--ALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRI-- 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 276 cLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAiglnmPYLAFFHITTHAFFKAMLFLCSGlIIHSINDEQDIRK 355
Cdd:PRK07234 251 -FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAA-----PLVGGLYALAHGLVKSTLFLCAG-ALPSRNFTELISQ 323
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 356 MGGLQHALPmtttcLSIGSLALMGTPFLAGFYSKDAIIEAASTSHinsmALLMtLVATAFTAVYSMRLIY 425
Cdd:PRK07234 324 MLGIGKWIP-----LTMASFSIAGFPLLAGFVSKVLTLKNLLPWQ----AIAL-NLAAVGTAASFWKFIF 383
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
92-424 |
3.13e-27 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 115.18 E-value: 3.13e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 92 AFLVTWSILefSTWYMQTDpHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYsARSDAATAALQAV 171
Cdd:COG1008 92 ALLTPLAIL--ASWNEIKK-RPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIW-GGERRIYAAIKFF 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 172 LYNRLGDIGFLLTLCWLMKNTQ--SIELPHM----LSSSPSTILLIGFITAAASKSAQFGFHPWLASA-MEGPTPVSALL 244
Cdd:COG1008 168 LYTLAGSLLMLVAILALYFLAGalTFDIAELaaapLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAhVEAPTAGSVLL 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 245 hSSTMVVAGIFLLIRIH-PLLSHNSLALT-ICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIG-LNMPYL 321
Cdd:COG1008 248 -AGVLLKMGGYGLLRFAlPLFPEASAYFApLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFaLNPLGL 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 322 --AFFHITTHAFFKAMLFLCSGLII---HSindeQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAA 396
Cdd:COG1008 327 qgAVLQMVSHGLITAALFLLVGVLYdrtHT----RDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGA 402
|
330 340
....*....|....*....|....*...
gi 146149061 397 STSHInSMALLMTLvATAFTAVYSMRLI 424
Cdd:COG1008 403 FQVNP-WLAILAAL-GLILTAAYLLWMY 428
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
74-426 |
1.77e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 112.99 E-value: 1.77e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 74 NLSFTTQFDLYTIIFLPVAFLVTWSILEFSTWYMQTD--PHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSF 151
Cdd:PRK06589 74 NYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 152 LLIGWysarsdAATAALQAVLYNRLGDIGFLLTLCWLMK--------NTQSIELPHMLSSSPSTILLIGFITAAAsKSAQ 223
Cdd:PRK06589 154 FLIGH------TRNNISLSGGYKYLKILMISALLLFLPAviliytktGNLDFVSGGLFSKNQSIILLLMFIYGIA-KTAI 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 224 FGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALTICLCLGAL------STFFAASYALTQNDIKK 297
Cdd:PRK06589 227 FPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNWLifipivSIFYSSLKALKTDNIKK 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 298 IIAYSTSSQLGLMMVAIGLNMPY---LAFFHITTHAFFKAMLFLCSGLIIhSINDEQDIRKMGGLQHALPMTTTCLSIGS 374
Cdd:PRK06589 307 ILAYSTISQLSLALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISISS 385
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 146149061 375 LALMGTPFLAGFYSKDAIIEAASTSHINSMALLMTLVATA---FTAVYSMRLIYF 426
Cdd:PRK06589 386 LSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVVIAssiLSALYLLKILSS 440
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
118-425 |
3.65e-26 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 112.17 E-value: 3.65e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 118 KYLLIFLLAMIT---LVSAGNLLILFTGWEGVGIMSFLLIGwYSARSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQS 194
Cdd:PRK08377 109 KYAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTA-YNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGT 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 195 IELPHM---LSSSPSTILLIGF---ITAAASKSAQFGFHPWLASAMEG-PTPVSALLhSSTMVVAGIFLLIRIHPLLSHN 267
Cdd:PRK08377 188 LNMAHIaqlAGTIDPTVAQVGLallIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNA 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 268 ---SLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPY---LAFFHITTHAFFKAMLFLCSG 341
Cdd:PRK08377 267 ngwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAgvdAGVFHMINHAIVKALLFLAVG 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 342 LIIHSINDEQdIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLMtLVATAFTAVYSM 421
Cdd:PRK08377 347 YVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALV-LGASVVEAVYYF 424
|
....
gi 146149061 422 RLIY 425
Cdd:PRK08377 425 RLIH 428
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
70-389 |
5.83e-26 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 112.67 E-value: 5.83e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 70 LGITNLSFTTQFDLYTIIFLPVAFLVTWSILEFSTWYMQ----TDPH-MGQFFKyllIFLLAMITLVSAGNLLILFTGWE 144
Cdd:PRK06521 67 LGLPFLPFHLRLDALSAFFLLVISLLGAAASLYSLGYFReyegKGPGaMGFFYN---LFLASMVLVLLADDAFSFLVAWE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 145 GVGIMSFLLIGWYSARSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPHMLSSSP-----STILLIGFItAAAS 219
Cdd:PRK06521 144 TMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAHLspfwaSLVFLLALF-GFGA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 220 KSAQFGFHPWLASAM-EGPTPVSALLhSSTMVVAGIFLLIRIHPLLSHNSLALT--ICLCLGALSTFFAASYALTQNDIK 296
Cdd:PRK06521 223 KAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWWWgvLVLALGAISAVLGVLYALAEHDLK 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 297 KIIAYSTSSQLGLMMVAIGLNMPYLA--------------FFHITTHAFFKAMLFLCSGLIIHSINdEQDIRKMGGLQHA 362
Cdd:PRK06521 302 RLLAYSTIENIGIIFVGLGLAMVFIAygmpllaalaltaaLYHLLNHALFKSLLFLGAGAVLHATG-TRDMEKLGGLIRR 380
|
330 340
....*....|....*....|....*..
gi 146149061 363 LPMTTTCLSIGSLALMGTPFLAGFYSK 389
Cdd:PRK06521 381 MPWTAWAFLIGCLAISALPPLNGFVSE 407
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
131-412 |
8.83e-26 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 111.91 E-value: 8.83e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 131 VSAGNLLILFTGWEGVGIMSFLLIgWYSARSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPHMLS-SSPSTIL 209
Cdd:PRK12668 110 VFAGDLLTLFVFWELMAFTSTFLV-WARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGlGGTAAWL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 210 -LIGFITAAASksaqFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPllSHNSLALticlcLGALSTFFAASY 288
Cdd:PRK12668 189 iLIGFGVNAAF----PPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP--GTELLIY-----IGAAMAVYGVFF 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 289 ALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYL---AFFHITTHAFFKAMLFLCSGLIIHSINdEQDIRKMGGLQHALPM 365
Cdd:PRK12668 258 ALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSMPL 336
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 146149061 366 TTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLMTLVA 412
Cdd:PRK12668 337 TALFCLVGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLAS 383
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
92-424 |
2.03e-25 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 109.64 E-value: 2.03e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 92 AFLVTWSILefSTWYMQTDPhMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSaRSDAATAALQAV 171
Cdd:TIGR01972 87 ALLTLLAIL--ASWESIQKR-VKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWG-GPNRIYAAMKFF 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 172 LYNRLGDIGFL---LTLCWLMKNTQSIE--LPHMLSSSPSTILLIGFITAAASKSAQFGFHPWLASAM-EGPTPVSALLH 245
Cdd:TIGR01972 163 LYTLAGSLLMLlaiLGLYFLGGGTFDLLelLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHvEAPTAGSVILA 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 246 SSTMVVAGIFLLIRIHPLLSHNSLAL-TICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYL--- 321
Cdd:TIGR01972 243 GVLLKMGTYGFLRFNLPLFPDASLYFaPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGisg 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 322 AFFHITTHAFFKAMLFLCSGLI---IHSindeQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAAST 398
Cdd:TIGR01972 323 AVFQMISHGLITAALFLLVGVLyerAHT----RDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSFK 398
|
330 340
....*....|....*....|....*.
gi 146149061 399 SHINSMALLMTlvATAFTAVYSMRLI 424
Cdd:TIGR01972 399 VNPVVAFLAAL--GIVLAAAYMLTLY 422
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
17-425 |
1.44e-24 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 108.16 E-value: 1.44e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 17 ILVILPLVNtkSKVFHLTTKNAVKMAFFMSLPPLILFMSQKQTNTSANMKWFNLGITNLSFTTQFDLYTIIFLPVAFLVT 96
Cdd:PRK08668 5 LLLLTPLIG--SVLAYLLKKINEKIGVIGNALPLLFLIKLYFTLKVGTGEKLTLFFGGFKLTFTLTHLSWFFAMISLLVI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 97 WSILEFSTWYMQTDPHMgqFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIgwYSARSDAATAALQAVLYNRL 176
Cdd:PRK08668 83 FSVAFFMVSEKTKNDAY--FNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMV--PMGKKESRKASLKYFVLSAI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 177 GDIGFLLTLCWLMKNTQSIELPHMLS-----SSPSTILLIGFITAAA--SKSAQFGFHPWLASAM-EGPTPVSALLhSST 248
Cdd:PRK08668 159 GAYAMLYAIFLIYAKTGTFDFADISQglindTSTGFALIVFLFLLAFgvAKAGIFPLHVWAPDAYsEAPQSFSAVL-SGQ 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 249 MVVAGIFLLI------------------RIHPLLSHnslaltICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLM 310
Cdd:PRK08668 238 LSKLGAYGFLlvlyvlpgtklfsefgtyRGVPLFNY------ILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYI 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 311 MVAIGLNMPY---LAFFHITTHAFFKAMLFLCSGLIIHSINdEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFY 387
Cdd:PRK08668 312 LVGLGLGTSLgfaGGLFHVFNHALFKGLFFLIFAAVIYRTG-TTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFA 390
|
410 420 430
....*....|....*....|....*....|....*...
gi 146149061 388 SKDAIIEAASTSHINSMAlLMTLVATAFTAVYSMRLIY 425
Cdd:PRK08668 391 SKWLIFEALISKGMPITA-FMAFFGSIGSFLYVFRPLA 427
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
122-395 |
8.67e-24 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 105.97 E-value: 8.67e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 122 IFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPhmL 201
Cdd:PRK08667 119 LFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELS--P 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 202 SSSPSTILLIGFITA---AASKSAQFGFHPWLASAMEG-PTPVSALLhSSTMVVAGIFLLIRIHPLLSHNSLAL-TICLC 276
Cdd:PRK08667 197 LGASAGILSLVFLLLflgFGIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRFLMDVLSPELWWgVLILL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 277 LGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGL-------NMPYLAF-------FHITTHAFFKAMLFLCSGL 342
Cdd:PRK08667 276 AGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvyGLDTLALlalggalFHSLNHALFKSLLFLTAGS 355
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 146149061 343 IIHSINDeQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEA 395
Cdd:PRK08667 356 VVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYES 407
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
81-425 |
2.32e-23 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 103.27 E-value: 2.32e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 81 FDLYTIIFLPVAFLVTWSILEFSTWYMQTDP-HMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSA 159
Cdd:COG1007 68 VDGFALFFKLLILLAALLVLLLSRDYLERRGlLRGEFYALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRD 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 160 RSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPHM-----LSSSPSTILLIGF---ITAAASKSAQFGFHPWLA 231
Cdd:COG1007 148 DRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIaaalaAGGANSPLLLLGLvlvLAGLAFKLSAVPFHMWTP 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 232 SAMEG-PTPVSALLhSSTMVVAGIFLLIRI-----HPLLSHNSLALTIclcLGALSTFFAASYALTQNDIKKIIAYSTSS 305
Cdd:COG1007 228 DVYEGaPTPVTAFL-ATAPKIAAFAALLRLlveafPGLAADWQLLLAV---LAVLSMTVGNLAALAQTNVKRMLAYSSIA 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 306 QLGLMMVAI--GLNMPYLA-FFHITTHAFFKAMLFLCSGLIIHSINDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPF 382
Cdd:COG1007 304 HAGYLLLGLaaGTPLGVSAaLFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPP 383
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 146149061 383 LAGFYSKDAIIEAASTSHINSMALLMtLVATAFTAVYSMRLIY 425
Cdd:COG1007 384 TAGFFGKFYVFSAAVEAGLYWLAVIA-VLNSVISAYYYLRVVK 425
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
82-421 |
7.41e-22 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 98.85 E-value: 7.41e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 82 DLYTIIFLPVAFLVTWSILEFSTWYMQ--------TDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLL 153
Cdd:PRK06458 68 DDLNVFFLALIGVVGFLTSLYSIGYMRhevehgelSPVTLRLYYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALL 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 154 IGWYSARS--DAA-----------------TAALQAVLYNRLGDIGflLTLCWLMKNTQSIELPHMLSSSPSTILLIGFI 214
Cdd:PRK06458 148 VGIYRTRAslEAAwkyiiicsvgvafalfgTILVYANAATVMGDGE--MAILWTELLKHASLLDPTLMKLAFVFLLIGFG 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 215 TaaasKSAQFGFHPWLASA-MEGPTPVSALLHSSTMVVAgIFLLIRIHPLLS---HNSLALTICLCLGALSTFFAASYAL 290
Cdd:PRK06458 226 T----KVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDaaiGSDFPGRLLLIFGLLSVLVAAFFLL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 291 TQNDIKKIIAYSTSSQLGLMMVAIGLNMPyLAFF----HITTHAFFKAMLFLCSGLIIHSInDEQDIRKMGGLQHALPMT 366
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGP-LGIFaallHMLNHSLTKSAIFFASGNVLQKY-GTRDINVIRGLLKVSPLT 378
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 146149061 367 TTCLSIGSLALMGTPFLAGFYSKDAIIEAA-STSHINSMALLMTLVATAFTAVYSM 421
Cdd:PRK06458 379 GWGLMLGALAIAGMPPFGVFISEFLILTAGlARGPLLIAILLLLLLTLAFAALVRR 434
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
419-596 |
1.09e-20 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 89.92 E-value: 1.09e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 419 YSMRLIYFTTMTHARMTPVLLCDENDSRVLNPLTRLAIGTIAAGLLINNITLSNHPIIhSMPIYMKLTALIVTVAAFTIA 498
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMM-TMPLYLKLLALLVTILGLLLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 499 YDLAKVFWTNPTMNHGTKKYDPL----YFNQVIHRSSTNTTLNLAWHLITHLAESlLMKKFGPTHIETSQLLPIKVVHLT 574
Cdd:pfam06455 80 LELSNLSNKQLKKSLNFNLHSFSgsmwFFPNLSHRLIPKLSLKLGQKLAKQIDQG-WSEKFGPQGIAKTLMTLSKIIQNS 158
|
170 180
....*....|....*....|..
gi 146149061 575 QTAQIKVYLSVLFITLICVTMV 596
Cdd:pfam06455 159 QKGLIKIYLLSFLLWLLLLLLL 180
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
114-424 |
8.02e-20 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 92.96 E-value: 8.02e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 114 GQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIG-WYSARSDaaTAALQAVLYNRLGDIGFLLTLCWL---- 188
Cdd:PRK05846 111 KFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGvWGGKNRI--YAATKFFLYTLLGSLLMLVAIIYLvvvy 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 189 MKNTQSIELP----HMLSSSPSTILLIGFITAAASKSAQFGFHPWLASAM-EGPTPVSALLhsstmvvAGIFL------L 257
Cdd:PRK05846 189 YNATGTFDIAdllnLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDAHvQAPTAGSVLL-------AGILLkmgaygL 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 258 IRIH-PLLSHNSLALTICLC-LGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIG-LNMPYL--AFFHITTHAFF 332
Cdd:PRK05846 262 LRFSlPLFPDASHEFAPIIItLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFaGNQLGIqgAIFQMISHGLS 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 333 KAMLFLCSGLII---HSindeQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHInsmalLMT 409
Cdd:PRK05846 342 SAALFLLVGVLYdrlHT----RDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNP-----VIA 412
|
330
....*....|....*...
gi 146149061 410 LVATA---FTAVYSMRLI 424
Cdd:PRK05846 413 FIATTgliLAAVYSLWLY 430
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
109-424 |
1.96e-19 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 91.42 E-value: 1.96e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 109 TDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGwYSARSDAATAAlqAVLYNRLGDIGFLLTLCWL 188
Cdd:PRK05777 98 EDRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAA-LRRDRRRSLEA--AIKYFVLGALASGFLLYGM 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 189 M---KNTQSIELPHM-----LSSSPSTILLIG--FITAA-ASKSAQFGFHPWLASAMEG-PTPVSALLHSSTMVvAGIFL 256
Cdd:PRK05777 175 SllyGATGSLSFAGIakalaDGSGNSLLLLFGlvFLLVGlAFKLSAVPFHMWTPDVYEGaPTPVTAFLATAPKI-AAFAV 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 257 LIRI-----HPLLSHNSLALTIclcLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAI--GLNMPYLA-FFHITT 328
Cdd:PRK05777 254 LLRLlvvafGGLSEDWQQVLAI---IAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLaaGTAEGYSAvLFYLLA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 329 HAFFKAMLFLCSGLIIHSINDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLM 408
Cdd:PRK05777 331 YLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIG 410
|
330
....*....|....*.
gi 146149061 409 tLVATAFTAVYSMRLI 424
Cdd:PRK05777 411 -VLNSAIGAFYYLRVI 425
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
220-470 |
7.52e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 83.63 E-value: 7.52e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 220 KSAQFGFHPWLASAM-EGPTPVSALLhSSTMVVAGIFLLIRIHPLLSHNSLALT------ICLCLGALSTFFAASYALTQ 292
Cdd:PRK12662 222 KAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIVYDVFKANFVFTtlpfnnVFMILAALAIVFGSVLAILS 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 293 NDIKKIIAYSTSSQLGLMMVAIGLNMPY---LAFFHITTHAFFKAMLFLCSGLIIHSInDEQDIRKMGGLQHALPMTTTC 369
Cdd:PRK12662 301 KDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLA 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 370 LSIGSLALMGTPFLAGFYSKDAIIEAASTSHInSMALLMTLVATAFTAVYSMRLI---YFTTMTHARMTPVLLCDENDSR 446
Cdd:PRK12662 380 FVLLSLSLIGMPPTSGFVAKWYILDAFIKSNA-WIGLVVLLVGSGLSVIYVWKIVealYFESRMVESKANDKAFKTPNAM 458
|
250 260
....*....|....*....|....
gi 146149061 447 VLNPLTrLAIGTIAAGLLINNITL 470
Cdd:PRK12662 459 VLCIWI-MAILSIIVGIYPIPLTL 481
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
97-344 |
2.37e-16 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 82.01 E-value: 2.37e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 97 WSILEFSTWYMQTDPHMGQFFKYL-LIFLLAMITLVSaGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQAVLYNR 175
Cdd:PRK08601 86 FIIQRFSVRYLLGDRSYRKYFALFtFTTGFASLAWLS-GDLRLMALCWGATLLGLTLLIGLNKGWKVAREAAKISGMLFL 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 176 LGDIGFLLTLCWLMKNTQSIELPHMLSSS--------PSTILLIGFITAAASKSAQFGFHPWLASAMEGPTPVSALLHSS 247
Cdd:PRK08601 165 ISWLALALAIVWLFIATGEWQLTSVLSNEnlaqlgtwEKTGINLLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 248 tMVVAGIFLLIRIHPLLsHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYLAFFHIT 327
Cdd:PRK08601 245 -LVNAGGIMLTRFSPLF-HDDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLI 322
|
250
....*....|....*..
gi 146149061 328 THAFFKAMLFLCSGLII 344
Cdd:PRK08601 323 LHGLFKATLFLQSGSAV 339
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
207-396 |
4.71e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 81.15 E-value: 4.71e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 207 TILLIGFITAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALT--ICLCLGALSTFF 284
Cdd:PRK07691 209 TVVAILFLFVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFThyLILILALLTIIF 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 285 AASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYL---AFFHITTHAFFKAMLFLCSGLIIHsINDEQDIRKMGGLQH 361
Cdd:PRK07691 289 GVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIK 367
|
170 180 190
....*....|....*....|....*....|....*
gi 146149061 362 ALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAA 396
Cdd:PRK07691 368 RYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGT 402
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
82-464 |
2.34e-15 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 78.84 E-value: 2.34e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 82 DLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARs 161
Cdd:PRK12663 76 DSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQER- 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 162 DAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPH-------MLSSSPSTILLIGFITAAASKSAQFGFHpWLASAM 234
Cdd:PRK12663 155 EQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHiamrlndMGDTATLTTIALLFLLAFGMKAALFPFM-WLPAAY 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 235 EGPTPVSALLHSSTMVVAGIFLLIRIHPLL--SHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMV 312
Cdd:PRK12663 234 HTPNTEVAALFAALLTKVGIYALIRVFTLLfpQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 313 AIGLNMPYL---AFFHITTHAFFKAMLFLCSGLIIHsINDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSK 389
Cdd:PRK12663 314 GLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGK 392
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 146149061 390 DAIIEAASTshINSMALLMTLVATAFTAVYSMRLIYFTTMTHARMTPVLLCDENDSRVLNPLTRLAIGTIAAGLL 464
Cdd:PRK12663 393 VLLVQGALD--NGAYILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVVVIAMGIA 465
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
240-425 |
4.01e-15 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 78.15 E-value: 4.01e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 240 VSALLHS-STMVVAGIFLLI-RIHPLLSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLN 317
Cdd:PRK06277 233 GSALLQTfSKFVLVALMLVIfKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALG 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 318 MPY---LAFFHITTHAFFKAMLFLCSGlIIHSINDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIE 394
Cdd:PRK06277 313 TPLgivAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
170 180 190
....*....|....*....|....*....|.
gi 146149061 395 AASTSHINSMALLMTLVATAfTAVYSMRLIY 425
Cdd:PRK06277 392 AAMQANMPELAIIMIIVSIG-TFVSMMKAFY 421
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
123-422 |
1.53e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 76.33 E-value: 1.53e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 123 FLLAMITLVSAGNLLILFtgW---EGVGIMSFLLIGWYSARsDAATAALQ-------AVLYNRLGDIgFLLTLCWLMKNT 192
Cdd:PRK08676 110 LLLSVITFAFFSDNLALF--WifaELTTVFSAMLIAILSAR-ENIDAALKyifiastAMIFAFIGLI-FLFSLTRQALGT 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 193 QSI---ELPHMLSSSPSTILLIGFI---TAAASKSAQFGFHPWLASA-MEGPTPVSALLhSSTMVVAGIFLLIRIHPLLS 265
Cdd:PRK08676 186 GTLnwtELAAHASLLSPSVLGASFLfifIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLR 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 266 HNSLALT---ICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMP---YLAFFHITTHAFFKAMLFLC 339
Cdd:PRK08676 265 QSGAAEQfsnVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPlalFWMLFHMLAHSLVKSGLFFS 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 340 SGlIIHSINDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAI-IEAASTS-HINSMALLMTLVATAFTA 417
Cdd:PRK08676 345 AG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFIlLQLGGISvWLVLAVLLLLLLAASSFA 423
|
....*
gi 146149061 418 VYSMR 422
Cdd:PRK08676 424 IFLLK 428
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
117-424 |
1.13e-13 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 73.58 E-value: 1.13e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 117 FKYLLIFLLA--MITLVSAGNLLILFTGWEGVGIMSFLLIG-WYSARSdaATAALQAVLYNRLGDIGFL---LTLCWLMK 190
Cdd:PRK06473 108 FYYSLLLLLNagVSGAFLAQDLLLFFLFYELELIPLYLLIAiWGGQRR--GYAATKFLLYTAISGILILvsfLGLVWLSG 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 191 NTQ---SIELPHMLSSSPSTILLIGFITAAASKSAQFGFHPWLASA-MEGPTPVSALLhsstmvvAGIFLLIRIHPLL-- 264
Cdd:PRK06473 186 ASSfdyEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-------AGVLLKLGTYGLLrf 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 265 -------SHNSLALTICLcLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPY---LAFFHITTHAFFKA 334
Cdd:PRK06473 259 gvglfpeAWVYLAPWLAT-WAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLsilAAVFQMISHGLISA 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 335 MLFLCSGlIIHSINDEQDIRKMGGL---QHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTshINSMALLMTLV 411
Cdd:PRK06473 338 LLFLLVG-VVYKKTGSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFP--IFPVQTLLCMI 414
|
330
....*....|...
gi 146149061 412 ATAFTAVYSMRLI 424
Cdd:PRK06473 415 GTGLTAVYFLLLV 427
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
73-424 |
1.26e-12 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 70.47 E-value: 1.26e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 73 TNLSFTTQF--DLYTIIFLPVAFLVTWSILEFSTWYM-QTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIM 149
Cdd:PRK02504 66 NPISFLGSFnaDNLSIAFRAIIALSTLVTLLMSWRYVeQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIA 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 150 SFLLIGWYSARSDAATAALQAVLYNRLGDIGFLLTLCWL----MKNTQSIELPHMLSSSPSTILLIGFITAAAS---KSA 222
Cdd:PRK02504 146 SYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLyglsGGSTQLSAIALALITSPSLGLALALVFVIAGiafKIS 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 223 QFGFHPWLASAMEG-PTPVSALLhSSTMVVAGIFLLIRI----HPLLSHN-SLALTIclcLGALSTFFAASYALTQNDIK 296
Cdd:PRK02504 226 AVPFHQWTPDVYEGsPTPVVAFL-SVGSKAAGFALAIRLlvtaFPSFDEQwKLLFTA---LAILSMVLGNVVALAQTSMK 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 297 KIIAYSTSSQLGLMMV--AIGLNMPYLAF-FHITTHAFFKAMLFLCsgLIIHSINDEQD-IRKMGGLQHALPMTTTCLSI 372
Cdd:PRK02504 302 RMLAYSSIGQAGFVMIglVAGTEAGYASMvFYLLAYLFMNLGAFAC--VILFSLRTGTDqISDYAGLYQKDPLLTLGLSL 379
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 146149061 373 GSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLmTLVATAFTAVYSMRLI 424
Cdd:PRK02504 380 CLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLLVLV-GLVTSVISIYYYIRVI 430
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
102-428 |
8.39e-12 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 67.75 E-value: 8.39e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 102 FSTWYMQTDPHMgqFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWY--SARSDAATaalQAVLYNRLGDI 179
Cdd:PRK12561 77 FASWKVTRKPRL--FYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWggQKRLYAAT---KFILYTALASI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 180 GFL---LTLCwLMKNTQSIELPHMLSSSPST----ILLIGFITAAASKSAQFGFHPWLASAM-EGPTPVSallhsstMVV 251
Cdd:PRK12561 152 FILvagLALA-LSGDTFTFDLAELGAKSYPLalelLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MIL 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 252 AGIFL------LIRIH-PLLSHNSLALT-ICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAI------GLN 317
Cdd:PRK12561 224 AGVLLkmggyaLIRFNvQMLPDAHVYFApALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIaaftdlGIS 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 318 MpylAFFHITTHAFFKAMLFLCSGLI---IHSINdeqdIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIE 394
Cdd:PRK12561 304 G---AMLQMISHGLIAAALFFLTGVTyerTHTLS----IPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFL 376
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 146149061 395 AASTSHINS-----MALLMTLVATAFTAVY--SM-RLIYFTT 428
Cdd:PRK12561 377 GITSSDVYSstfrtITILLAAVGLILTPIYllSMlRRVFYGP 418
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
199-430 |
3.13e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 65.23 E-value: 3.13e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 199 HMLSSSPSTILLIgfiTAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLirihpLLSHNSLALTICLCLG 278
Cdd:MTH00112 87 TQLTNPTSCTLLT---LALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLL-----LMTSNSLNPTLLLTLA 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 279 ALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNmPYLAFFHITTHAFFKAMLFLCsgLIIHSINDEQDirkMGG 358
Cdd:MTH00112 159 ILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFLT--LNTTSTKTLKD---MMT 232
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 146149061 359 LQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLMTLVATAFTAVYsMRLIYFTTMT 430
Cdd:MTH00112 233 SWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFY-LRLTYISTIT 303
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
81-420 |
7.23e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 64.94 E-value: 7.23e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 81 FDLYTIIFLPVAFLVTWSILEFSTwymqtdphmGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSAR 160
Cdd:MTH00226 107 FIILTGFIVPCSILISWHSVKYLT---------KSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSR 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 161 SDAATAALQAVLYNRLGDIGFLLTLCWLMK---NTQSIEL---PHMLSSSPSTILLIGFITAAASKSAQFGFHPWLASA- 233
Cdd:MTH00226 178 EEKMQAAYYFFFYTLIGSVLMLLCLFSLYNihgTTDYLTLascSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAh 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 234 MEGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALT-ICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMV 312
Cdd:MTH00226 258 VEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLApAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSI 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 313 A------IGLNMpylAFFHITTHAFFKAMLFLCSgLIIHSINDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGF 386
Cdd:MTH00226 338 TlvthdiIGLTG---SIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
330 340 350
....*....|....*....|....*....|....
gi 146149061 387 YSKdaIIEAASTSHINSMALLMTLVATAFTAVYS 420
Cdd:MTH00226 414 IGE--YLSILSSFNWNPIIGVFVCSGVILSAVYS 445
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
81-423 |
8.57e-11 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 64.31 E-value: 8.57e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 81 FDLYTIIFLPVAFLVTWSILEFstwymqtdphmgqFFKYLLIFLLAMITLV----SAGNLLILFTGWEGVGIMSFLLIGW 156
Cdd:MTH00204 88 FILLTTLLIPICILISWKSIKF-------------LFKEFLLCLLFLEVLLigvfSVLDLLLFYILFEGILIPMFLLIGI 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 157 YSARSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQS----IELPHMLSSSPSTILLIGFITAAASKSAQFGFHPWLAS 232
Cdd:MTH00204 155 WGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTtdyqILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQ 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 233 A-MEGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALT-ICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLM 310
Cdd:MTH00204 235 AhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFApLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLV 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 311 MVAI------GLnmpYLAFFHITTHAFFKAMLFLCSGlIIHSINDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTP--- 381
Cdd:MTH00204 315 PLGLfthtieGL---VAAVFLMLAHGFVSSALFIAVT-FLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPlsc 390
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 146149061 382 -FLAGFYSKDAIIEaastshINSMALLMTLVATAFTAVYSMRL 423
Cdd:MTH00204 391 nFVGEFFSLLAAFE------YSLGLGVLVTSGMVWSAAYSLYL 427
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
120-386 |
2.37e-10 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 63.04 E-value: 2.37e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 120 LLIFL-LAM----ITLVSAGNLLILFTGWEGVGIMSFLLIGWYSA--RSDAATaalQAVLYNRLGDIGFL---LTLCWLM 189
Cdd:CHL00011 113 LFYFLmLAMysgqIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGkkRLYSAT---KFILYTAGGSIFLLigvLGMGLYG 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 190 KNTQSIELPHMLSSS-PST---ILLIGFITAAASKSAQFGFHPWLASamegpTPVSAllHSST-MVVAGIFL------LI 258
Cdd:CHL00011 190 SNEPTLNFETLANQSyPVAleiLFYIGFLIAYAVKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLI 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 259 RIH-PLLSH-NSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAI------GLNMpylAFFHITTHA 330
Cdd:CHL00011 263 RINmELLPHaHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIgsitdtGLNG---AILQIISHG 339
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 331 FFKAMLFLCSGLIIHSIN----DEqdirkMGGLQHALPMTTTCLSIGSLALMGTPFLAGF 386
Cdd:CHL00011 340 FIGAALFFLAGTSYDRIRlvylDE-----MGGIAIPMPKIFTMFSSFSMASLALPGMSGF 394
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
124-424 |
2.43e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 62.36 E-value: 2.43e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 124 LLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPHM--- 200
Cdd:MTH00196 3 ALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYInlv 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 201 --LSSSPSTI-LLIGFITAAAS---KSAQFGFHPWLASAMEG-PTPVSALLhsSTMVVAGIF-LLIRIHPllshnslALT 272
Cdd:MTH00196 83 lnSGQSFSSVsVPIGYLLIIVAllfKLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIFsILVSIGL-------NVN 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 273 ICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLN--------MPYLAFFHITThaffkamlfLCSGLII 344
Cdd:MTH00196 154 ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGsfesiqasLVYLFIYIIMS---------ICVFSII 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 345 HSINDEQD-IRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLmTLVATAFTAVYSMRL 423
Cdd:MTH00196 225 LALNVYKNlIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLL-AVFCSVIAGVYYVRI 303
|
.
gi 146149061 424 I 424
Cdd:MTH00196 304 V 304
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
13-389 |
3.41e-10 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 62.71 E-value: 3.41e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 13 VSSIILVILPLVNTKSKVFHLttknavkmaFFMSLPPLILFMsqkqtnTSANMKWFNLGITNLSFTTQFDLYTIIFLpvA 92
Cdd:CHL00049 24 FGLILLLMIDLTSDQKDIPWL---------YFISSTSLVMSI------TALLFQWREEPMISFSGNFQTNNFNEIFQ--F 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 93 FLVTWSIL--EFSTWYMQ-TDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQ 169
Cdd:CHL00049 87 LILLCSTLciPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDVRSNEATMK 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 170 AVLYNRLGDIGFLLTLCWLM----------KNTQSIELPHMLSSSPSTILLIGFITAAASKSAQFGFHPWLASAMEG-PT 238
Cdd:CHL00049 167 YLLMGGASSSILVYGFSWLYglsggeielqEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPT 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 239 PVSALLhSSTMVVAGIFLLIRI----HPLLSHNS-LALTIclcLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVA 313
Cdd:CHL00049 247 PVVAFL-SVTSKVAASALATRIfdipFYFSSNEWhLLLEI---LAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIG 322
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 146149061 314 IGLNMPYLAFFHITTHAFFKAMLFL--CSGLIIHSINDEQD-IRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSK 389
Cdd:CHL00049 323 IIVGDSNDGYASMITYMLFYIFMNLgtFACIVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
227-386 |
4.16e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 62.54 E-value: 4.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 227 HPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLALTIC-LCLGALSTFFAASYALTQNDIKKIIAYSTSS 305
Cdd:PRK08042 200 HGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVAlLVLGMITAFVGGLYALMEHNIQRLLAYHTLE 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 306 QLGLMMVAIG-------LNMPYL-------AFFHITTHAFFKAMLFLCSGLIIHSINdEQDIRKMGGLQHALPMTTTCLS 371
Cdd:PRK08042 280 NIGIILLGLGagvtgiaLEQPALialglvgGLYHLLNHSLFKSVLFLGAGSVWFRTG-HRDIEKLGGIGKKMPVISIAML 358
|
170
....*....|....*
gi 146149061 372 IGSLALMGTPFLAGF 386
Cdd:PRK08042 359 VGLMAMAALPPLNGF 373
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
196-425 |
6.36e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 61.91 E-value: 6.36e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 196 ELPHMLSSSPSTILLIGFitaaASKSAQFGFHPWLA-SAMEGPTPVSA----LLhssTMVvaGIFLLIRIHPLLSHNSLA 270
Cdd:PRK12665 202 ELPSGTRTALFAVLLVAF----GIKAAVFPLSFWLPdSYPTAPAPVTAvfagLL---TKV--GVYAIIRTHTLLFPGGGL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 271 LTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPY---LAFFHITTHAFFKAMLFLCSGLIihsi 347
Cdd:PRK12665 273 DTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVGLI---- 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 348 nDEQD----IRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEA-ASTSHINSMALLMTLVATAFTAVYSMR 422
Cdd:PRK12665 349 -ERQAgsssLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAgAEDGTWLAWALVAGGVVTSLLTLYAVA 427
|
...
gi 146149061 423 LIY 425
Cdd:PRK12665 428 RVW 430
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
102-343 |
6.47e-10 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 61.73 E-value: 6.47e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 102 FSTWYMQTDPHMGQFFKYLLIF-LLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSarsDAATAALQAVLYNRLGDIG 180
Cdd:PRK06459 59 LASLYSIEYDHYGKWLSSLYILtILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTK---KNKRPAFVFMAFGELSTVL 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 181 FLLTLCWLMKNTQSIELPHMLSSSPSTILLIGFITaaasKSAQFGFH--PWLASAM-EGPTPVSALLhSSTMVVAGIFLL 257
Cdd:PRK06459 136 ILAGFAWAFIISGTTNFSYLPSPVPLILASFGFII----KMGMMPFLvsEWLPIAHgNAPSNFSAIL-SATMTLMGVYGI 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 258 IRIHPL---LSHNSLALTIcLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMP-------------YL 321
Cdd:PRK06459 211 LKMTILtqtIPIGYFGLTI-LAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGLYMVtkqlitsiehfslIT 289
|
250 260
....*....|....*....|..
gi 146149061 322 AFFHITTHAFFKAMLFLCSGLI 343
Cdd:PRK06459 290 VILYSFAHSVAKTGLFLSSGLQ 311
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
42-431 |
2.03e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 59.95 E-value: 2.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 42 AFFMSLPPLILFmsqkQTNTSANMKWFNLGITNLSFTTQFDLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFkyll 121
Cdd:MTH00206 29 SFLIALLFLLWF----KWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPINRQRIYITLLIV---- 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 122 iFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPHML 201
Cdd:MTH00206 101 -LQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILY 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 202 SSSPST----ILLIGFITAAASKSAQFGFHPWLASA-MEGPTpvsallhSSTMVVAGIFL------LIRIHPLLS-HNSL 269
Cdd:MTH00206 180 FSKLTTwnnnLWWLACILAFLVKLPLYGVHLWLPKAhVEAPV-------AGSMVLAGVLLklggygMMRIILILGpSTKL 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 270 ALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYL---AFFHITTHAFFKAMLFLCSGLIIHS 346
Cdd:MTH00206 253 SSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGfkgALLLMIAHGLVSSALFCLANLLYER 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 347 INdEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTShiNSMALLMTLVATAFTAVYSMRLiyF 426
Cdd:MTH00206 333 SH-TRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSW--SNFTLPLLGLGFLFTAIYSLYM--F 407
|
....*
gi 146149061 427 TTMTH 431
Cdd:MTH00206 408 VMTQH 412
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
67-117 |
8.52e-09 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 51.66 E-value: 8.52e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 146149061 67 WFNLGITNLSFTTQFDLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFF 117
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
12-320 |
1.25e-08 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 57.68 E-value: 1.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 12 TVSSIILVILPLVNTKSKVFHLTTKNAVkMAFFMSLpplilFMSQKQTNTSANMKWFNLGITNLSftTQFDLYTIIFLPV 91
Cdd:MTH00044 5 ILLSLGIAITSWIVPKNKLWPISISQSS-LISLLSL-----FLLNNHWSSSWHNLSLSLATDSLS--SPLIILSCWLAPL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 92 AFLVtwsilefSTWYMQTDPHMGQ--FFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQ 169
Cdd:MTH00044 77 SLLA-------SINHLSNNSPNNQrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLY 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 170 AVLYNRLGDIGFLLTLCWLMKNTQSIELP-------HMLSSSPSTILLIGFITAAASKSAQFGFHPWLASA-MEGPTPVS 241
Cdd:MTH00044 150 FLFYTLFGSLPLLISLIAIYSSSSSLSIPlselnwlTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 242 allhsstMVVAGIFL------LIRIHPLLSHN-----SLALTICLCLGALSTffaASYALTQNDIKKIIAYSTSSQLGLM 310
Cdd:MTH00044 230 -------MILAAILLklggygLIRLINLFSLPsanniSFILIVFCCWGALIT---SIICLRQTDLKALIAYSSVGHMSLV 299
|
330
....*....|
gi 146149061 311 MVAIGLNMPY 320
Cdd:MTH00044 300 AAGIFSGTNW 309
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
126-419 |
2.55e-08 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 56.64 E-value: 2.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 126 AMITLVSAG--------NLLILFTGWEGVGIMSFLLIG-WYSARSdaATAALQAVLYNRLGDIGFL---LTLCWLMKNTQ 193
Cdd:PRK07363 111 SLILLINGGiagallaqNLLLFFLFYELELIPFYLLIAiWGGEKR--GYASIKFLIYTAVSGLLVLaafLGIVWLSGSTS 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 194 ---SIELPHMLSSSPSTILLIGFITAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLSHNSLA 270
Cdd:PRK07363 189 fdyDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWS 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 271 LT--ICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYL---AFFHITTHAFFKAMLFLCSGlIIH 345
Cdd:PRK07363 269 LVapGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVE 347
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 146149061 346 SINDEQDIRKMGGLQH---ALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHinSMALLMTLVATAFTAVY 419
Cdd:PRK07363 348 RKVGTRDLDVLNGLMNpirGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTF--PIPTLLCIVASGLTAVY 422
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
111-430 |
1.51e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 50.35 E-value: 1.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 111 PHMGQFFKYLLIFLLAMItlVSAGNLLILFTGWEgVGIMSF--LLIGWYSARSDAATAA---LQAVlynrlGDIGFLLTL 185
Cdd:MTH00200 3 PLILPLFILSLGLGTLLT--FSSSHWFLIWLGLE-INTLAIipLLIKQHHPRKVEATTKyfiIQAT-----ASALLLFGG 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 186 CWLMKNTQSIELPHMLSSSPSTILLIgfitAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLS 265
Cdd:MTH00200 75 LLNAWTSGQWGISEMLGPLSETLILL----ALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALN 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 266 HNSLalticLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMpylaffHITTHAFFKAMLFLCSGLIIH 345
Cdd:MTH00200 151 SNIL-----LLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSP------NLALLYLLLYVIITLTVFLLL 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 346 SINDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLMtLVATAFTAVYSMRLIY 425
Cdd:MTH00200 220 NLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATIL-LLGSLLSLFFYLRLSY 298
|
....*
gi 146149061 426 FTTMT 430
Cdd:MTH00200 299 LTLLT 303
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
67-437 |
2.63e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 50.11 E-value: 2.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 67 WFNLGITNLSFTTQFDLYTIIFLPVAFLVTWSILEFStwymqtdphmgqfFKYLLIFLL---AMITLVSAGNLLILFTGW 143
Cdd:PRK12664 26 LYDWSEPVYNLDLVLFIVLSFSLALIFLYILPIKNMR-------------FSEMLCYLLyyiSSIAAISSSSLTLVVIGF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 144 EGVGIMSFLLIGWYSARSDAAtaalQAVLYNRLGDIGFLLTLCWLMKNTQSIELphmlSSSPSTILLIGFITAAASksaq 223
Cdd:PRK12664 93 EFMALSALMIIAAGCPGGNIG----AFIHYACVHFFSGVLLLVGASGQAQNGQY----TGYCKLLFMLGLLINCAC---- 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 224 FGFHPWLASAMEGPTPVSALLHS--STMVVAGIFLLIRIHPllshnslalTICLCLGALSTFFAASYALTQNDIKKIIAY 301
Cdd:PRK12664 161 FPASSWVVDAYPAASNFGIIVLSlfTTKVAALVLLLFFSGE---------EILLFLGIITAIYGIIFASLEQNIRRLLCY 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 302 STSSQLGLMMVAIGLNMPY-----LAFFHITTHAFFKAMLFLCSGLIIHSiNDEQDIRKMGGLqHALPMTTTCLSIGSLA 376
Cdd:PRK12664 232 NVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINR-TRKFNLNRVGGL-FKMSLEAMCCIIAILN 309
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 146149061 377 LMGTPFLAGFYSKDAI---IEAASTSHINSMALLMTLVATAFTAVySMRLIYFTTMTHARMTPV 437
Cdd:PRK12664 310 MGAFPGTAGFVSKSLIthsIDTAGLTLVLYKKLFLICSLLLFASV-GLKFFWYAFISKSKSKPE 372
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
213-429 |
1.25e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 47.36 E-value: 1.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 213 FITAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIrihpLLSHNSLALTIClclGALSTFFAASYALTQ 292
Cdd:MTH00197 85 VILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILA----FNSSSFMGLLIC---SVLSSLIGGIGGMNQ 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 293 NDIKKIIAYSTSSQLGLMMVAIGLNMPYLAFFHITthaFFKAMLFLCSgliIHSINDEQDIRKMGGLQHALPMTTTCLSI 372
Cdd:MTH00197 158 SNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLI---YFVIMFMLFL---FLSKNNLSSLNQQYSNPESMSSNLVFLGL 231
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 146149061 373 GSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLMTLvATAFTAVYSMRLIYFTTM 429
Cdd:MTH00197 232 SFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLIL-STCFSLYYYLSLAYKSLI 287
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
83-431 |
1.67e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 47.64 E-value: 1.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 83 LYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILF-TGWEGVGIMSFLLIGWYSARS 161
Cdd:MTH00127 62 LSTPLLVLTCWLLPLMILASQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFyVMFEATLIPTLIIITRWGNQT 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 162 DAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIEL-------PHMLSSSPSTILLIGFITAAASKSAQFGFHPWLASA- 233
Cdd:MTH00127 142 ERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMltlqysqPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAh 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 234 MEGPTPVSALLhSSTMVVAGIFLLIRIHPLLSHNSLALTICLCLGALSTFF-AASYALTQNDIKKIIAYSTSSQLGLMMV 312
Cdd:MTH00127 222 VEAPIAGSMVL-AAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIImTGSICLRQTDLKSLIAYSSVSHMGLVAG 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 313 AIGLNMPYL---AFFHITTHAFFKAMLFlCSGLIIHSINDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSK 389
Cdd:MTH00127 301 GILIQTPWGftgALILMIAHGLTSSALF-CLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGE 379
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 146149061 390 DAIIeaASTSHINSMALLMTLVATAFTAVYSMRLIYFTTMTH 431
Cdd:MTH00127 380 LMII--TSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGP 419
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
81-314 |
2.22e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 47.35 E-value: 2.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 81 FDLYTIIFLPVAFLVTWSILEFStwymqtdphMGQFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSAR 160
Cdd:MTH00217 85 FLILTALLTPICILISWNSIKFL---------IKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSR 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 161 SDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPHM----LSSSPSTILLIGFITAAASKSAQFGFHPWLASA-ME 235
Cdd:MTH00217 156 EEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALcclkIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAhVE 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 236 GPTPVSALLhsstmvvAGIFL------LIRIH-PLLSHNSLALT-ICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQL 307
Cdd:MTH00217 236 APVAGSVIL-------AGVLLklggygFIRFSwPLLPEASEYFSpLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHM 308
|
....*..
gi 146149061 308 GLMMVAI 314
Cdd:MTH00217 309 GLVTLGI 315
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
64-317 |
7.78e-05 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 45.50 E-value: 7.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 64 NMKWFNLGITNLSFTTQFDLYTIIFLPVAFLVTWSILEFSTWYMQTDPHMGQFFKYLLIFLLAMITLVSAGNLLILFTGW 143
Cdd:MTH00014 40 NLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFF 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 144 EGVGIMSFLLIGWYSARSDAATAALQAVLYNRLGDIGFLLTLCWLMKNTQSIELPH--MLSSSPSTILLIGFITAAA--S 219
Cdd:MTH00014 120 EASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMssMEPPSIYLMNLWWLITILAfmV 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 220 KSAQFGFHPWLASA-MEGPTpvsallhSSTMVVAGIFL------LIRIHPLLSHNSLALT-----ICLCLGALSTFFAas 287
Cdd:MTH00014 200 KMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygLLRMSSLFMHINKSLSapfssISLVGAVITSLIC-- 270
|
250 260 270
....*....|....*....|....*....|
gi 146149061 288 yaLTQNDIKKIIAYSTSSQLGLMMVAIGLN 317
Cdd:MTH00014 271 --IRQPDLKSLIAYSSVGHMGLMTAGIMSN 298
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
200-430 |
8.07e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 44.91 E-value: 8.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 200 MLSSSPSTILLIgfitAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPLLShnslaLTICLCLGA 279
Cdd:MTH00070 89 MQTPLPTIMLTI----ALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLN-----SNLLIIMGL 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 280 LSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNmPYLAFFHITTHAFFKAMLFLcSGLIIHSINdeqdIRKMGGL 359
Cdd:MTH00070 160 LSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNLLIYLIMTSSMFL-MLMNLNSTN----INKLSSS 233
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 146149061 360 QHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLMTLvATAFTAVYSMRLIYFTTMT 430
Cdd:MTH00070 234 WSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMAL-SALLSLFFYLRLSYAMSLT 303
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
226-430 |
1.63e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 44.07 E-value: 1.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 226 FHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHPllshnSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSS 305
Cdd:MTH00105 111 FHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISP-----SINPNLLLTLAILSILIGGWGGLNQTQLRKILAYSSIA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 306 QLGLMMVAIGLNmPYLAFFHITTHAFFKAMLFLCsgLIIHSINdeqDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAG 385
Cdd:MTH00105 186 HMGWMTAILPYN-PTLTLLNLLIYIIMTLTMFML--LMLNSST---TTLSLSHTWNKTPLMTSLILLTLLSLGGLPPLTG 259
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 146149061 386 FYSKDAIIEAASTSHINSMALLMTLVATAFTAVYsMRLIYFTTMT 430
Cdd:MTH00105 260 FMPKWMIIQELTKNNNIILPTLMAITALLNLYFY-MRLIYSTSLT 303
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
92-388 |
1.75e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 44.31 E-value: 1.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 92 AFLVTWSILefSTWYMQTDPHMgqFFKYLLIFLLAMITLVSAGNLLILFTGWEGVGIMSFLLIGWYSARSdAATAALQAV 171
Cdd:PRK02546 97 GFITTLAVL--AAWPVTFKPKL--FYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKK-RQYAATKFI 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 172 LYNRLGDIgFLLTLCWLMK---NTQSIELPHMLSSSPST----ILLIGFITAAASKSAQFGFHPWLASAM-EGPTPVSAL 243
Cdd:PRK02546 172 LYTAGSSL-FILLAALAMAfygDTPTFDMTALAAKDFGLgfqlLCYAGLLIAYGVKLPIVPLHTWLPDAHgEATAPVHML 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 244 LhsstmvvAGIFLLIRIHPLLSHNSLALT--------ICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIG 315
Cdd:PRK02546 251 L-------AGILLKMGGYALLRMNAGMLPdahaqfapLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIG 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 316 ----LNMPYlAFFHITTHAFFKAMLFLCSGLIIHSINDEQdIRKMGGLQHALP----MTTTClSIGSLALmgtPFLAGFY 387
Cdd:PRK02546 324 sftdLGTSG-AMLQMISHGLIGASLFFLVGATYDRTHTLM-LDEMGGVGQKMRkmfaMWTAC-SLASLAL---PGMSGFV 397
|
.
gi 146149061 388 S 388
Cdd:PRK02546 398 A 398
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
122-421 |
3.70e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 43.26 E-value: 3.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 122 IFLLAMITL-------VSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQAVLYNRLGDIGFLLTLCWL--MKNT 192
Cdd:MTH00124 94 TFLTTLILLqtflilaFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLhnQTGT 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 193 QSIEL-----PHMLSSSPSTILLIGFITAAASKSAQFGFHPWLASA-MEGPTPVSallhsstMVVAGIFL------LIRI 260
Cdd:MTH00124 174 LSLPMlqlthPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAILLklggygIIRI 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 261 HPLLSHNSLALT---ICLCL-GALSTffaASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYL---AFFHITTHAFFK 333
Cdd:MTH00124 247 TLLLPPLSNTLHypfLTLALwGALMT---SLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSlsgAMILMIAHGLTS 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 334 AMLFlCSGLIIHSINDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIeaASTSHINSMALLMTLVAT 413
Cdd:MTH00124 324 SMLF-CLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIM--TSLFNWSPTTIILTGLAT 400
|
....*...
gi 146149061 414 AFTAVYSM 421
Cdd:MTH00124 401 LITASYTL 408
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
115-314 |
1.64e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 41.29 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 115 QFFKYLLIFLLAMITLV-SAGNLLILFTGWEGVGIMSFLLI-GWySARSDAATAALQAVLYNRLGDIGFLLTLCWLMKNT 192
Cdd:MTH00163 87 NLFLFLILFLLIFLLLTfSSMNLLLFYIFFESSLIPTLFLIlGW-GYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNS 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 193 QSIELPHMLSSSPSTILL-IGFITAAASKSAQFGFHPWLASA-MEGPTpvsallhSSTMVVAGIFL------LIRIHPLL 264
Cdd:MTH00163 166 GSLSFFLLNFFGSLNFLWyLSMILAFLVKMPMFFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLLRVMSFF 238
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 146149061 265 SHNSLAL-TICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAI 314
Cdd:MTH00163 239 SKLGLKFnYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGL 289
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
226-426 |
1.85e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 41.16 E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 226 FHPWLASAMEG-PTPVSALLhsSTMVVAGIF-LLIRIHPLLShnslaltICLCLGALSTFFAASYALTQNDIKKIIAYST 303
Cdd:MTH00199 209 FHMWAPDVYEGaPTITTALL--ATVPKIGVFsILVQIGPVTN-------VVLICAVLSIIYGAIGALNQTKIKRLLAYSG 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 304 SSQLG--LMMVAIGLN------MPYLAFFHITThaffkamlfLCSGLIIHSINDEQD-IRKMGGLQHALPMTTTCLSIGS 374
Cdd:MTH00199 280 IGHMGfiLFGVAIGSFesiqasLIYMIIYVIMS---------ICSFSIILSLKLTKGlIVEVSGLSRKNPVIALTLALTF 350
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 146149061 375 LALMGTPFLAGFYSKDAIIEAASTSHINSMALLMTLVATaFTAVYSMRL---IYF 426
Cdd:MTH00199 351 LSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSV-IAGVYYVRVvqiIYF 404
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
194-429 |
2.18e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 40.58 E-value: 2.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 194 SIELPHMLSSSPSTILLIGFITAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLirihPLLSHNSLALTI 273
Cdd:MTH00160 74 SIILNMLNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL----SYLINNNFIIII 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 274 CLclgaLSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYLAFFHITTHAFFKAMLFLCSGLIIHSINDEQDI 353
Cdd:MTH00160 150 II----LSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNS 225
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 146149061 354 RKMGglqhalPMTTTCLSIGSLALMGTPFLAGFYSKDAIIEAASTSHINSMALLMTLVATaFTAVYSMRLIYFTTM 429
Cdd:MTH00160 226 NNKS------KKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSL-ITLYFYLRISYSSLM 294
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
200-389 |
2.97e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 40.30 E-value: 2.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 200 MLSSSPSTILLIGFITAAASKSAQFGFHPWLASAMEGPTPVSALLHSSTMVVAGIFLLIRIHpllshNSLALTICLCLGA 279
Cdd:MTH00041 85 SINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISIS-----NLLNSNILILCGI 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 280 LSTFFAASYALTQNDIKKIIAYSTSSQLGlMMVAIGLNMPYLAFFHITTHAFFKAMLFLcsgliIHSINDEQDIRKMGGL 359
Cdd:MTH00041 160 LSVLVGGWGGLNQTQTRKILAFSSIAHLG-WIIITSAYSPNASIIMFLIYIIINTSIFL-----IGNNFSLSTLSHLNKL 233
|
170 180 190
....*....|....*....|....*....|
gi 146149061 360 QHALPMTTTCLSIGSLALMGTPFLAGFYSK 389
Cdd:MTH00041 234 SQLNPISAFLFILSILSLGGLPPLTGFLNK 263
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
198-421 |
3.86e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 39.90 E-value: 3.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 198 PHMLSSSPSTILLIGFITAAASKSAQFGFHPWLASA-MEGPTPVSallhsstMVVAGIFL------LIRIHPLLSHNSLA 270
Cdd:MTH00068 184 PMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MILAAVLLklggygILRISILLTPLSKE 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 271 LT-ICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAIGLNMPYL---AFFHITTHAFFKAMLFlCSGLIIHS 346
Cdd:MTH00068 257 LSyPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSfsgAIILMISHGLTSSALF-CLANTNYE 335
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 146149061 347 INDEQDIRKMGGLQHALPMTTTCLSIGSLALMGTPFLAGFYSKDAIIeaASTSHINSMALLMTLVATAFTAVYSM 421
Cdd:MTH00068 336 RTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIM--VSLFNWSNWTILITGLGTLITAAYTL 408
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
117-314 |
6.10e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 39.19 E-value: 6.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 117 FKYLLIFLLAMITL-VSAGNLLILFTGWEGVGIMSFLLIGWYSARSDAATAALQAVLYNRLGDIGFLLTLC----WLMKN 191
Cdd:MTH00205 90 FTVSVIMLLLILILsFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFflnsLNFSL 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 146149061 192 TQSIELPHMLSSSPSTILLIGFITAAASKSAQFGFHPWLASA-MEGPTpvsallhSSTMVVAGIFL------LIRI-HPL 263
Cdd:MTH00205 170 SMFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRItSML 242
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 146149061 264 LSHNSLALTICLCLGALSTFFAASYALTQNDIKKIIAYSTSSQLGLMMVAI 314
Cdd:MTH00205 243 YKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGV 293
|
|
| |
