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Conserved domains on  [gi|139935978|ref|YP_001129523|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Hynobius arisanensis]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009552)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 11-116 6.19e-59

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 176.72  E-value: 6.19e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978  11 STILSLVLIIISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPTPWASQLLFPEYTLL 90
Cdd:MTH00069   9 STILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNTPTNTLF 88

                         90       100
                 ....*....|....*....|....*.
gi 139935978  91 WSTTILILLSIGLIYEWTQGGLEWAE 116
Cdd:MTH00069  89 WSTLILILLTLGLIYEWIQGGLEWAE 114
 
Name Accession Description Interval E-value
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 11-116 6.19e-59

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 176.72  E-value: 6.19e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978  11 STILSLVLIIISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPTPWASQLLFPEYTLL 90
Cdd:MTH00069   9 STILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNTPTNTLF 88

                         90       100
                 ....*....|....*....|....*.
gi 139935978  91 WSTTILILLSIGLIYEWTQGGLEWAE 116
Cdd:MTH00069  89 WSTLILILLTLGLIYEWIQGGLEWAE 114
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-113 1.91e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.03  E-value: 1.91e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978   19 IIISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLptPWASQL-LFPEYTLLWSTTILI 97
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLF--PWAVSFrELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 139935978   98 LLSIGLIYEWTQGGLE 113
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 11-114 5.07e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 83.25  E-value: 5.07e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978  11 STILSLVLIIISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLptPWASQLL-FPEYTL 89
Cdd:COG0838   15 ALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLF--PWAVVFReLGWFGL 92

                         90       100
                 ....*....|....*....|....*
gi 139935978  90 LWSTTILILLSIGLIYEWTQGGLEW 114
Cdd:COG0838   93 IEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 11-116 6.19e-59

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 176.72  E-value: 6.19e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978  11 STILSLVLIIISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPTPWASQLLFPEYTLL 90
Cdd:MTH00069   9 STILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLNTPTNTLF 88

                         90       100
                 ....*....|....*....|....*.
gi 139935978  91 WSTTILILLSIGLIYEWTQGGLEWAE 116
Cdd:MTH00069  89 WSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-116 6.51e-56

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 169.33  E-value: 6.51e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978   1 MNLIMIMMMISTILSLVLIIISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPTPWAS 80
Cdd:MTH00136   1 MNLITTILTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 139935978  81 QLLFPEYTLLWSTTILILLSIGLIYEWTQGGLEWAE 116
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 2-115 1.62e-47

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 148.11  E-value: 1.62e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978   2 NLIMIMMMISTILSLVLIIISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPTPWASQ 81
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 139935978  82 LLFPEYTLLWSTTILILLSIGLIYEWTQGGLEWA 115
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEWA 114
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-116 2.49e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 135.07  E-value: 2.49e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978   1 MNLIMIMMMiSTILSLVLIIISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPTPWAS 80
Cdd:MTH00106   1 MNLMLTLLT-NTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAS 79

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 139935978  81 QLLFPEYTLLWSTTILILLSIGLIYEWTQGGLEWAE 116
Cdd:MTH00106  80 QTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-116 5.02e-37

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 121.63  E-value: 5.02e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978   1 MNLIMIMMMISTILSLVLIIISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPTPWAS 80
Cdd:MTH00042   1 MTNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPAT 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 139935978  81 QLLFPEYTLLWSTTILILLSIGLIYEWTQGGLEWAE 116
Cdd:MTH00042  81 LITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-114 1.16e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 115.38  E-value: 1.16e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978   1 MNLIMIMMMISTILSLVLIIISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPTPWAS 80
Cdd:MTH00203   1 MNLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSN 80

                         90       100       110
                 ....*....|....*....|....*....|....
gi 139935978  81 QLLFPeyTLLWSTTILILLSIGLIYEWTQGGLEW 114
Cdd:MTH00203  81 QLSSL--SLLLAFLFLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-113 1.91e-26

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 94.03  E-value: 1.91e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978   19 IIISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLptPWASQL-LFPEYTLLWSTTILI 97
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLF--PWAVSFrELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 139935978   98 LLSIGLIYEWTQGGLE 113
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 11-114 4.65e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 90.99  E-value: 4.65e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978  11 STILSLVLIIISFWLPLNNP-DSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPTPWASQLLFPEYTL 89
Cdd:MTH00161   9 ILLISIILMILASLLSKKSImDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFKTSNMMSWL 88

                         90       100
                 ....*....|....*....|....*
gi 139935978  90 LWSTTILILLSIGLIYEWTQGGLEW 114
Cdd:MTH00161  89 ITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-116 1.03e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 90.30  E-value: 1.03e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978   1 MNLIMIMMMISTILSLVLIIISFWL-PLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPTPWA 79
Cdd:MTH00148   1 MLSILLSLLFALILSPVLLLLGLVLsKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 139935978  80 SQLLFPEYTLLWSTTILILLSIGLIYEWTQGGLEWAE 116
Cdd:MTH00148  81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 7.96e-23

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 85.43  E-value: 7.96e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978   1 MNLIMIMMMISTILSLVLIIISFWLPLN-NPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPTPWA 79
Cdd:MTH00202   1 MLLILFMSILSILISSLLFLVSWMLSFRsLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 139935978  80 SQLLFPEYTLLWSTTILILLSIGLIYEWTQGGLEWAE 116
Cdd:MTH00202  81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 11-115 1.65e-22

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 84.92  E-value: 1.65e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978  11 STILSLVLIIISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLptPWASQLLFPEYTLL 90
Cdd:PRK06602  18 AIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLF--PWAVSFREIGWLGF 95

                         90       100
                 ....*....|....*....|....*.
gi 139935978  91 WSTTILILLSIG-LIYEWTQGGLEWA 115
Cdd:PRK06602  96 VEAMIFILVLLVgLVYLWRKGALDWE 121
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 11-114 5.07e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 83.25  E-value: 5.07e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978  11 STILSLVLIIISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLptPWASQLL-FPEYTL 89
Cdd:COG0838   15 ALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLF--PWAVVFReLGWFGL 92

                         90       100
                 ....*....|....*....|....*
gi 139935978  90 LWSTTILILLSIGLIYEWTQGGLEW 114
Cdd:COG0838   93 IEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 11-114 1.72e-21

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 82.06  E-value: 1.72e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978  11 STILSLVLIIISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLptPWASQLLFPEYTLL 90
Cdd:MTH00055  15 SIGLSTVISGASYIVGVKQPDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLF--PWCVVYNQIGLFGF 92

                         90       100
                 ....*....|....*....|....*
gi 139935978  91 WSTTILILLSIG-LIYEWTQGGLEW 114
Cdd:MTH00055  93 WVMYLFLIILTIgLIYEWVKGGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 11-114 1.80e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 79.34  E-value: 1.80e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978  11 STILSLVLIIISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPTPWASQLLFPeYTLL 90
Cdd:MTH00018  10 SVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAP-FGFW 88

                         90       100
                 ....*....|....*....|....
gi 139935978  91 WSTTILILLSIGLIYEWTQGGLEW 114
Cdd:MTH00018  89 TMVGFLFILTLGLIYEWIKGGLEW 112
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-115 2.50e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 79.13  E-value: 2.50e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978   1 MNLIMIMMMISTILSLVLIIISFWLPL-NNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPTPWA 79
Cdd:MTH00012   1 MSLMMIPMMISLILPPLVLGAAWVLAArSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 139935978  80 SQLLFPEYTLLWSTTILILLSIGLIYEWTQGGLEWA 115
Cdd:MTH00012  81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDWS 116
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 16-114 8.07e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 67.65  E-value: 8.07e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978  16 LVLIIISFWLP-----LNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLptPWA---SQLLFPEY 87
Cdd:MTH00030  20 LLLVSISFTLGnsrigLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLF--PWSivfNQLNLFSF 97

                         90       100
                 ....*....|....*....|....*..
gi 139935978  88 TLLWstTILILLSIGLIYEWTQGGLEW 114
Cdd:MTH00030  98 WIVY--TFLIVLAIGLAYEWIKGGLEW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 34-114 9.90e-10

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 51.98  E-value: 9.90e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978  34 KLSPYECGFDPLGSARLP--FSIRFFLIAILFLLFDLEIALLLPtpWASQL-LFPEYTLLWSTTILILLSIGLIYEWTQG 110
Cdd:PRK07928  37 KLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYP--WAVSFdALGVFGLVEMALFMLTVFVAYAYVWRRG 114


                 ....
gi 139935978 111 GLEW 114
Cdd:PRK07928 115 GLEW 118
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 13-74 3.85e-09

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 50.28  E-value: 3.85e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 139935978  13 ILSLVLIIISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLL 74
Cdd:MTH00092  13 LLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFL 74
ndhC CHL00022
NADH dehydrogenase subunit 3
 11-79 1.18e-07

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 46.52  E-value: 1.18e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 139935978  11 STILSLVLIIISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLptPWA 79
Cdd:CHL00022  17 SSLIPILAFLISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLY--PWA 83
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
13-114 5.37e-07

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 44.73  E-value: 5.37e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 139935978  13 ILSLVLIIISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPTPWASQLLfPEYTLLWS 92
Cdd:PRK07756  21 LLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKL-GLFALIEM 99

                         90       100
                 ....*....|....*....|..
gi 139935978  93 TTILILLSIGLIYEWTQGGLEW 114
Cdd:PRK07756 100 LIFVVMLLVGLAYAWKKKVLQW 121
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
34-79 1.18e-05

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 41.58  E-value: 1.18e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 139935978  34 KLSPYECGFDPLGSARlPFSIRFFLIAILFLLFDLEIALLLptPWA 79
Cdd:PRK08489  47 KLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMF--PWA 89
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 36-77 3.86e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 37.18  E-value: 3.86e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 139935978  36 SPYECGFDPLGSARLPFSIRFFLIAILFLLFDLEIALLLPTP 77
Cdd:MTH00060  39 SSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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