|
Name |
Accession |
Description |
Interval |
E-value |
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
645-788 |
1.16e-33 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 125.90 E-value: 1.16e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 645 RYHAFVSYSQHDaeWVEEILVPELESTHPPFALCLHKRDFQPGRWIVDNIINSIEKSHRTLFVLSEHFVTSEWCRYELDF 724
Cdd:smart00255 1 EYDVFISYSGKE--DVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVA 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2558941269 725 SHFRIVDEHNDCAVLVLLEPIKKEtIPKRFCKLRKIMNsRTYLEWPEEEEKRseFWSNLRAALQ 788
Cdd:smart00255 79 ALENALEEGGLRVIPIFYEVIPSD-VRKQPGKFRKVFK-KNYLKWPEDEKEQ--FWKKALYAVP 138
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
316-555 |
4.42e-18 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 87.30 E-value: 4.42e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 316 IRNLDIQGFFEFSSMTQLGFLLENLHKVSVIngtvfvipPITTFLLKKLEYLDLSQNLLSDLtivptlSTSFGAYQNLIT 395
Cdd:COG4886 98 LTELDLSGNEELSNLTNLESLDLSGNQLTDL--------PEELANLTNLKELDLSNNQLTDL------PEPLGNLTNLKS 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 396 LNVSQNVLKSLglmSQLATNLKSLTYLDLSHNSFISMPEKCSWPATLRFLNLSSTKLRKMTPCLP--SSLTVLDLSENDL 473
Cdd:COG4886 164 LDLSNNQLTDL---PEELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPLAnlTNLETLDLSNNQL 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 474 KVFNQ--RFPQLVTLILTGNRFINLPQGELFPRLQMLLIQRNALRMFNRSDFKRFKNLQYLEAGDNNFVCSCEFVSFFKQ 551
Cdd:COG4886 241 TDLPElgNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLL 320
|
....
gi 2558941269 552 DTDL 555
Cdd:COG4886 321 TTLL 324
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
646-787 |
5.42e-18 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 82.03 E-value: 5.42e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 646 YHAFVSYSQHDAE-WVEEILVPELEstHPPFALCLHKRDFQPGRWIVDNIINSIEKSHRTLFVLSEHFVTSEWCRYELDf 724
Cdd:pfam01582 1 YDVFLSFRGSDTReWFVSHLLKELK--QKGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELV- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 725 shfRIVD---EHNDCAVLVLLEPIKKE------TIPKRFCKLRKIMNSRTYLEWPEEEEK------------RSEFWSNL 783
Cdd:pfam01582 78 ---KILEcalDLGQKVIPIFYEVDPSDvrkqtgSFGKAFKKHKKVLTEEKVLKWRGALNEvaniwhsksvsdESKFWKKI 154
|
....
gi 2558941269 784 RAAL 787
Cdd:pfam01582 155 AYDI 158
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
78-137 |
1.11e-13 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 66.01 E-value: 1.11e-13
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 78 SELKTLNLHRNKLKFIHKEAFKSQHKLEVLDLSLNNLKNLSSSWFHELNSLQQLNLVGNP 137
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNR 60
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
353-529 |
3.46e-09 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 60.48 E-value: 3.46e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 353 IPP-ITTFLLKKLEYLDLSQNLlsdltivptlstsfgaYQNLITLNVSQNVLKSLGlmsqlATNLKSLTYLDLSHNSFIS 431
Cdd:PRK15370 197 IPEqITTLILDNNELKSLPENL----------------QGNIKTLYANSNQLTSIP-----ATLPDTIQEMELSINRITE 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 432 MPEKCswPATLRFLNLSSTKLRKMTPCLPSSLTVLDLSENDLKVFNQRFPQ-LVTLILTGNRFINLPQgELFPRLQMLLI 510
Cdd:PRK15370 256 LPERL--PSALQSLDLFHNKISCLPENLPEELRYLSVYDNSIRTLPAHLPSgITHLNVQSNSLTALPE-TLPPGLKTLEA 332
|
170
....*....|....*....
gi 2558941269 511 QRNALRMFNRSDFKRFKNL 529
Cdd:PRK15370 333 GENALTSLPASLPPELQVL 351
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
59-249 |
4.05e-09 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 59.56 E-value: 4.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 59 LDLSCNQIESIDmNDLSPYSELKTLNLHRNKLKFIhKEAFKSQHKLEVLDLSLNNLKNLssSWFHELNSLQQLNLVGNPY 138
Cdd:COG4886 187 LDLSNNQITDLP-EPLGNLTNLEELDLSGNQLTDL-PEPLANLTNLETLDLSNNQLTDL--PELGNLTNLEELDLSNNQL 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 139 TTLGPAPIFQSL--LNLRTLQFGSPSLREVYKNGLDGLTHLDEMTFIGSYLRSYENGSLKAARPIELVSLSLQSLFENDP 216
Cdd:COG4886 263 TDLPPLANLTNLktLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLAL 342
|
170 180 190
....*....|....*....|....*....|...
gi 2558941269 217 ELVSKVLQDVSHPKTLLTIRDVELRTNTSTESF 249
Cdd:COG4886 343 SLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLL 375
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
59-457 |
9.01e-07 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 52.54 E-value: 9.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 59 LDLSCNQIESIDMNDLSPYSELKTLNLHRNKLKFIHKEAFKSQHKLEVLDLSLN--------------NLK-------NL 117
Cdd:PLN00113 145 LDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNqlvgqiprelgqmkSLKwiylgynNL 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 118 SSSWFHE---LNSLQQLNLVGNPYTtlGPAPifQSLLNLRTLQFgspslREVYKNGLDG--------LTHLDEMTFigsy 186
Cdd:PLN00113 225 SGEIPYEiggLTSLNHLDLVYNNLT--GPIP--SSLGNLKNLQY-----LFLYQNKLSGpippsifsLQKLISLDL---- 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 187 lrsyENGSLKAARP---IELVSLSLQSLFEND-----PELVS-----KVLQDVSH------PKTL-----LTIRDveLRT 242
Cdd:PLN00113 292 ----SDNSLSGEIPelvIQLQNLEILHLFSNNftgkiPVALTslprlQVLQLWSNkfsgeiPKNLgkhnnLTVLD--LST 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 243 NTSTESFKE--VREGGTKSLSLQNCTTTDEALTSFLMVmdgSSLSYIGLEDVHLIGQgwwqkaSCTHYENLHTAY---IR 317
Cdd:PLN00113 366 NNLTGEIPEglCSSGNLFKLILFSNSLEGEIPKSLGAC---RSLRRVRLQDNSFSGE------LPSEFTKLPLVYfldIS 436
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 318 NLDIQGFFEFSS--MTQLGFLleNLHKVSVINGtvfvIPpiTTFLLKKLEYLDLSQNLLSDltivpTLSTSFGAYQNLIT 395
Cdd:PLN00113 437 NNNLQGRINSRKwdMPSLQML--SLARNKFFGG----LP--DSFGSKRLENLDLSRNQFSG-----AVPRKLGSLSELMQ 503
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2558941269 396 LNVSQNVLKslGLMSQLATNLKSLTYLDLSHNSFI-SMPEKCSWPATLRFLNLSSTKLRKMTP 457
Cdd:PLN00113 504 LKLSENKLS--GEIPDELSSCKKLVSLDLSHNQLSgQIPASFSEMPVLSQLDLSQNQLSGEIP 564
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
363-522 |
7.22e-06 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 48.89 E-value: 7.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 363 KLEYLDLSQNLLSDLTIvPTLSTSFGAYQNLITLNVSQNVLKSLGlMSQLA---TNLKSLTYLDLSHNsfismpekcswp 439
Cdd:cd00116 166 DLKELNLANNGIGDAGI-RALAEGLKANCNLEVLDLNNNGLTDEG-ASALAetlASLKSLEVLNLGDN------------ 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 440 atlrflNLSSTKLRKMTPCLPS---SLTVLDLSENDLKV--------FNQRFPQLVTLILTGNRFINLPQGELFPRLQML 508
Cdd:cd00116 232 ------NLTDAGAAALASALLSpniSLLTLSLSCNDITDdgakdlaeVLAEKESLLELDLRGNKFGEEGAQLLAESLLEP 305
|
170
....*....|....
gi 2558941269 509 LIQRNALRMFNRSD 522
Cdd:cd00116 306 GNELESLWVKDDSF 319
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
55-165 |
4.05e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 47.12 E-value: 4.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 55 NALGLDlscNQ-IESIDMNDLSPYSELKTLNLHRNKLKFIHKEAFKSQHKLEVLDLSLNNLKNLSSSWFHELNSLQQLNL 133
Cdd:PLN03150 421 DGLGLD---NQgLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNL 497
|
90 100 110
....*....|....*....|....*....|....*....
gi 2558941269 134 VGNPYTTLGPAPIFQSLLNLRTLQF-------GSPSLRE 165
Cdd:PLN03150 498 NGNSLSGRVPAALGGRLLHRASFNFtdnaglcGIPGLRA 536
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
363-429 |
1.99e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 39.82 E-value: 1.99e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2558941269 363 KLEYLDLSQNLLSDLTivptlSTSFGAYQNLITLNVSQNVLKSLGLmsQLATNLKSLTYLDLSHNSF 429
Cdd:pfam13855 2 NLRSLDLSNNRLTSLD-----DGAFKGLSNLKVLDLSNNLLTTLSP--GAFSGLPSLRYLDLSGNRL 61
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
645-788 |
1.16e-33 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 125.90 E-value: 1.16e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 645 RYHAFVSYSQHDaeWVEEILVPELESTHPPFALCLHKRDFQPGRWIVDNIINSIEKSHRTLFVLSEHFVTSEWCRYELDF 724
Cdd:smart00255 1 EYDVFISYSGKE--DVRNEFLSHLLEKLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWCLDELVA 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2558941269 725 SHFRIVDEHNDCAVLVLLEPIKKEtIPKRFCKLRKIMNsRTYLEWPEEEEKRseFWSNLRAALQ 788
Cdd:smart00255 79 ALENALEEGGLRVIPIFYEVIPSD-VRKQPGKFRKVFK-KNYLKWPEDEKEQ--FWKKALYAVP 138
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
316-555 |
4.42e-18 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 87.30 E-value: 4.42e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 316 IRNLDIQGFFEFSSMTQLGFLLENLHKVSVIngtvfvipPITTFLLKKLEYLDLSQNLLSDLtivptlSTSFGAYQNLIT 395
Cdd:COG4886 98 LTELDLSGNEELSNLTNLESLDLSGNQLTDL--------PEELANLTNLKELDLSNNQLTDL------PEPLGNLTNLKS 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 396 LNVSQNVLKSLglmSQLATNLKSLTYLDLSHNSFISMPEKCSWPATLRFLNLSSTKLRKMTPCLP--SSLTVLDLSENDL 473
Cdd:COG4886 164 LDLSNNQLTDL---PEELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPLAnlTNLETLDLSNNQL 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 474 KVFNQ--RFPQLVTLILTGNRFINLPQGELFPRLQMLLIQRNALRMFNRSDFKRFKNLQYLEAGDNNFVCSCEFVSFFKQ 551
Cdd:COG4886 241 TDLPElgNLTNLEELDLSNNQLTDLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLL 320
|
....
gi 2558941269 552 DTDL 555
Cdd:COG4886 321 TTLL 324
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
646-787 |
5.42e-18 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 82.03 E-value: 5.42e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 646 YHAFVSYSQHDAE-WVEEILVPELEstHPPFALCLHKRDFQPGRWIVDNIINSIEKSHRTLFVLSEHFVTSEWCRYELDf 724
Cdd:pfam01582 1 YDVFLSFRGSDTReWFVSHLLKELK--QKGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWCLDELV- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 725 shfRIVD---EHNDCAVLVLLEPIKKE------TIPKRFCKLRKIMNSRTYLEWPEEEEK------------RSEFWSNL 783
Cdd:pfam01582 78 ---KILEcalDLGQKVIPIFYEVDPSDvrkqtgSFGKAFKKHKKVLTEEKVLKWRGALNEvaniwhsksvsdESKFWKKI 154
|
....
gi 2558941269 784 RAAL 787
Cdd:pfam01582 155 AYDI 158
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
649-723 |
4.09e-14 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 69.27 E-value: 4.09e-14
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2558941269 649 FVSYSQHDAEWVEEIlVPELEST-HPPFalcLHKRDFQPGRWIVDNIINSIEKSHRTLFVLSEHFVTSEWCRYELD 723
Cdd:pfam13676 2 FISYAGEDRAWAEWL-ADALEAAgYRVW---LDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRAEWE 73
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
78-137 |
1.11e-13 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 66.01 E-value: 1.11e-13
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 78 SELKTLNLHRNKLKFIHKEAFKSQHKLEVLDLSLNNLKNLSSSWFHELNSLQQLNLVGNP 137
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNR 60
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
353-529 |
3.46e-09 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 60.48 E-value: 3.46e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 353 IPP-ITTFLLKKLEYLDLSQNLlsdltivptlstsfgaYQNLITLNVSQNVLKSLGlmsqlATNLKSLTYLDLSHNSFIS 431
Cdd:PRK15370 197 IPEqITTLILDNNELKSLPENL----------------QGNIKTLYANSNQLTSIP-----ATLPDTIQEMELSINRITE 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 432 MPEKCswPATLRFLNLSSTKLRKMTPCLPSSLTVLDLSENDLKVFNQRFPQ-LVTLILTGNRFINLPQgELFPRLQMLLI 510
Cdd:PRK15370 256 LPERL--PSALQSLDLFHNKISCLPENLPEELRYLSVYDNSIRTLPAHLPSgITHLNVQSNSLTALPE-TLPPGLKTLEA 332
|
170
....*....|....*....
gi 2558941269 511 QRNALRMFNRSDFKRFKNL 529
Cdd:PRK15370 333 GENALTSLPASLPPELQVL 351
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
59-249 |
4.05e-09 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 59.56 E-value: 4.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 59 LDLSCNQIESIDmNDLSPYSELKTLNLHRNKLKFIhKEAFKSQHKLEVLDLSLNNLKNLssSWFHELNSLQQLNLVGNPY 138
Cdd:COG4886 187 LDLSNNQITDLP-EPLGNLTNLEELDLSGNQLTDL-PEPLANLTNLETLDLSNNQLTDL--PELGNLTNLEELDLSNNQL 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 139 TTLGPAPIFQSL--LNLRTLQFGSPSLREVYKNGLDGLTHLDEMTFIGSYLRSYENGSLKAARPIELVSLSLQSLFENDP 216
Cdd:COG4886 263 TDLPPLANLTNLktLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLAL 342
|
170 180 190
....*....|....*....|....*....|...
gi 2558941269 217 ELVSKVLQDVSHPKTLLTIRDVELRTNTSTESF 249
Cdd:COG4886 343 SLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLL 375
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
331-585 |
9.26e-09 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 59.09 E-value: 9.26e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 331 TQLGFLLENLHKVSVINGTVFVIPPiTTFLLKKLEYLDLSQNLLSDlTIVPTLstsFGaYQNLITLNVSQNVLKslGLMS 410
Cdd:PLN00113 230 YEIGGLTSLNHLDLVYNNLTGPIPS-SLGNLKNLQYLFLYQNKLSG-PIPPSI---FS-LQKLISLDLSDNSLS--GEIP 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 411 QLATNLKSLTYLDLSHNSFI-SMPEKCSWPATLRFLNLSSTKLRKMTPC---LPSSLTVLDLSENDLkvfNQRFPQ---- 482
Cdd:PLN00113 302 ELVIQLQNLEILHLFSNNFTgKIPVALTSLPRLQVLQLWSNKFSGEIPKnlgKHNNLTVLDLSTNNL---TGEIPEglcs 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 483 ---LVTLILtgnrFINLPQGELFPRLQM------LLIQRNALRMFNRSDFKRFKNLQYLEAGDNNFVCScefVSFFKQDT 553
Cdd:PLN00113 379 sgnLFKLIL----FSNSLEGEIPKSLGAcrslrrVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGR---INSRKWDM 451
|
250 260 270
....*....|....*....|....*....|..
gi 2558941269 554 DLFITLRDSRRNYVCDTPFTLRGDDIDSVRLS 585
Cdd:PLN00113 452 PSLQMLSLARNKFFGGLPDSFGSKRLENLDLS 483
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
328-539 |
1.59e-08 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 57.64 E-value: 1.59e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 328 SSMTQLGFLLENLHKVSVINGTVFVIPPITTFLLKKLEYLDLSQNLLSDLTIVPTLSTSFGAYQNLITLNVSQNVLKSLG 407
Cdd:COG4886 8 LTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 408 LMSQLAtNLKSLTYLDLSHNSFISMPEKcswpatLRFLNLSSTKLRKMTPCLPS--SLTVLDLSENDLKVFN---QRFPQ 482
Cdd:COG4886 88 GLTDLG-DLTNLTELDLSGNEELSNLTN------LESLDLSGNQLTDLPEELANltNLKELDLSNNQLTDLPeplGNLTN 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 2558941269 483 LVTLILTGNRFINLPQG-ELFPRLQMLLIQRNALRMFNRSdFKRFKNLQYLEAGDNNF 539
Cdd:COG4886 161 LKSLDLSNNQLTDLPEElGNLTNLKELDLSNNQITDLPEP-LGNLTNLEELDLSGNQL 217
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
59-178 |
2.21e-08 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 57.25 E-value: 2.21e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 59 LDLSCNQIESIDmNDLSPYSELKTLNLHRNKLKFIHkEAFKSQHKLEVLDLSLNNLKNLSSSwFHELNSLQQLNLVGNPY 138
Cdd:COG4886 118 LDLSGNQLTDLP-EELANLTNLKELDLSNNQLTDLP-EPLGNLTNLKSLDLSNNQLTDLPEE-LGNLTNLKELDLSNNQI 194
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 2558941269 139 TTLgPAPIFQsLLNLRTLQFGSPSLREVYKN--GLDGLTHLD 178
Cdd:COG4886 195 TDL-PEPLGN-LTNLEELDLSGNQLTDLPEPlaNLTNLETLD 234
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
397-541 |
2.65e-08 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 57.40 E-value: 2.65e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 397 NVSQNVLKSLGLMSQLATNLKSLTYLDLSHNSFISMPEKCSwpATLRFLNLSSTKLRKMTPCLPSSLTVLDLSENDLKVF 476
Cdd:PRK15370 179 NKTELRLKILGLTTIPACIPEQITTLILDNNELKSLPENLQ--GNIKTLYANSNQLTSIPATLPDTIQEMELSINRITEL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 477 NQRFPQ-LVTLILTGNRFINLPQgELFPRLQMLLIQRNALR------------MFNRSDFKRF------KNLQYLEAGDN 537
Cdd:PRK15370 257 PERLPSaLQSLDLFHNKISCLPE-NLPEELRYLSVYDNSIRtlpahlpsgithLNVQSNSLTAlpetlpPGLKTLEAGEN 335
|
....
gi 2558941269 538 NFVC 541
Cdd:PRK15370 336 ALTS 339
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
59-457 |
9.01e-07 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 52.54 E-value: 9.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 59 LDLSCNQIESIDMNDLSPYSELKTLNLHRNKLKFIHKEAFKSQHKLEVLDLSLN--------------NLK-------NL 117
Cdd:PLN00113 145 LDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNqlvgqiprelgqmkSLKwiylgynNL 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 118 SSSWFHE---LNSLQQLNLVGNPYTtlGPAPifQSLLNLRTLQFgspslREVYKNGLDG--------LTHLDEMTFigsy 186
Cdd:PLN00113 225 SGEIPYEiggLTSLNHLDLVYNNLT--GPIP--SSLGNLKNLQY-----LFLYQNKLSGpippsifsLQKLISLDL---- 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 187 lrsyENGSLKAARP---IELVSLSLQSLFEND-----PELVS-----KVLQDVSH------PKTL-----LTIRDveLRT 242
Cdd:PLN00113 292 ----SDNSLSGEIPelvIQLQNLEILHLFSNNftgkiPVALTslprlQVLQLWSNkfsgeiPKNLgkhnnLTVLD--LST 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 243 NTSTESFKE--VREGGTKSLSLQNCTTTDEALTSFLMVmdgSSLSYIGLEDVHLIGQgwwqkaSCTHYENLHTAY---IR 317
Cdd:PLN00113 366 NNLTGEIPEglCSSGNLFKLILFSNSLEGEIPKSLGAC---RSLRRVRLQDNSFSGE------LPSEFTKLPLVYfldIS 436
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 318 NLDIQGFFEFSS--MTQLGFLleNLHKVSVINGtvfvIPpiTTFLLKKLEYLDLSQNLLSDltivpTLSTSFGAYQNLIT 395
Cdd:PLN00113 437 NNNLQGRINSRKwdMPSLQML--SLARNKFFGG----LP--DSFGSKRLENLDLSRNQFSG-----AVPRKLGSLSELMQ 503
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2558941269 396 LNVSQNVLKslGLMSQLATNLKSLTYLDLSHNSFI-SMPEKCSWPATLRFLNLSSTKLRKMTP 457
Cdd:PLN00113 504 LKLSENKLS--GEIPDELSSCKKLVSLDLSHNQLSgQIPASFSEMPVLSQLDLSQNQLSGEIP 564
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
59-114 |
4.35e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.82 E-value: 4.35e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 2558941269 59 LDLSCNQIESIDMNDLSPYSELKTLNLHRNKLKFIHKEAFKSQHKLEVLDLSLNNL 114
Cdd:pfam13855 6 LDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
363-522 |
7.22e-06 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 48.89 E-value: 7.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 363 KLEYLDLSQNLLSDLTIvPTLSTSFGAYQNLITLNVSQNVLKSLGlMSQLA---TNLKSLTYLDLSHNsfismpekcswp 439
Cdd:cd00116 166 DLKELNLANNGIGDAGI-RALAEGLKANCNLEVLDLNNNGLTDEG-ASALAetlASLKSLEVLNLGDN------------ 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 440 atlrflNLSSTKLRKMTPCLPS---SLTVLDLSENDLKV--------FNQRFPQLVTLILTGNRFINLPQGELFPRLQML 508
Cdd:cd00116 232 ------NLTDAGAAALASALLSpniSLLTLSLSCNDITDdgakdlaeVLAEKESLLELDLRGNKFGEEGAQLLAESLLEP 305
|
170
....*....|....
gi 2558941269 509 LIQRNALRMFNRSD 522
Cdd:cd00116 306 GNELESLWVKDDSF 319
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
364-498 |
3.31e-05 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 47.38 E-value: 3.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 364 LEYLDLSQNLLSDL-TIVPTLSTSFGAYQNLIT------------LNVSQNVLKSLGlmSQLATNLKSLTYLDlshNSFI 430
Cdd:PRK15370 264 LQSLDLFHNKISCLpENLPEELRYLSVYDNSIRtlpahlpsgithLNVQSNSLTALP--ETLPPGLKTLEAGE---NALT 338
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2558941269 431 SMPEkcSWPATLRFLNLSSTKLRKMTPCLPSSLTVLDLSENDLKVFNQRFP-QLVTLILTGNRFINLPQ 498
Cdd:PRK15370 339 SLPA--SLPPELQVLDVSKNQITVLPETLPPTITTLDVSRNALTNLPENLPaALQIMQASRNNLVRLPE 405
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
55-165 |
4.05e-05 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 47.12 E-value: 4.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 55 NALGLDlscNQ-IESIDMNDLSPYSELKTLNLHRNKLKFIHKEAFKSQHKLEVLDLSLNNLKNLSSSWFHELNSLQQLNL 133
Cdd:PLN03150 421 DGLGLD---NQgLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNL 497
|
90 100 110
....*....|....*....|....*....|....*....
gi 2558941269 134 VGNPYTTLGPAPIFQSLLNLRTLQF-------GSPSLRE 165
Cdd:PLN03150 498 NGNSLSGRVPAALGGRLLHRASFNFtdnaglcGIPGLRA 536
|
|
| PRK15387 |
PRK15387 |
type III secretion system effector E3 ubiquitin transferase SspH2; |
316-515 |
5.92e-05 |
|
type III secretion system effector E3 ubiquitin transferase SspH2;
Pssm-ID: 185285 [Multi-domain] Cd Length: 788 Bit Score: 46.69 E-value: 5.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 316 IRNLDIQGffefSSMTQLGFLLENLHKVSVINGTVFVIPPITTFLLK----------------KLEYLDLSQNLLSDLTI 379
Cdd:PRK15387 244 LRTLEVSG----NQLTSLPVLPPGLLELSIFSNPLTHLPALPSGLCKlwifgnqltslpvlppGLQELSVSDNQLASLPA 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 380 VPTLSTSFGAYQNLITlnvsqnvlkslglmsQLATNLKSLTYLDLSHNSFISMPekcSWPATLRFLNLSSTKLRKMtPCL 459
Cdd:PRK15387 320 LPSELCKLWAYNNQLT---------------SLPTLPSGLQELSVSDNQLASLP---TLPSELYKLWAYNNRLTSL-PAL 380
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2558941269 460 PSSLTVLDLSENDLKVFNQRFPQLVTLILTGNRFINLPqgeLFPR-LQMLLIQRNAL 515
Cdd:PRK15387 381 PSGLKELIVSGNRLTSLPVLPSELKELMVSGNRLTSLP---MLPSgLLSLSVYRNQL 434
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
363-429 |
1.99e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 39.82 E-value: 1.99e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2558941269 363 KLEYLDLSQNLLSDLTivptlSTSFGAYQNLITLNVSQNVLKSLGLmsQLATNLKSLTYLDLSHNSF 429
Cdd:pfam13855 2 NLRSLDLSNNRLTSLD-----DGAFKGLSNLKVLDLSNNLLTTLSP--GAFSGLPSLRYLDLSGNRL 61
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
54-179 |
4.81e-04 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 43.38 E-value: 4.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 54 ANALGLDLSCNQIESIDMNDLSPYSELKTLNLHRNklkfihkEAFKSQHKLEVLDLSLNNLKNLSSSwFHELNSLQQLNL 133
Cdd:COG4886 72 LLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN-------EELSNLTNLESLDLSGNQLTDLPEE-LANLTNLKELDL 143
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 2558941269 134 VGNPYTTLGPApiFQSLLNLRTLQFGSPSLREVyKNGLDGLTHLDE 179
Cdd:COG4886 144 SNNQLTDLPEP--LGNLTNLKSLDLSNNQLTDL-PEELGNLTNLKE 186
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
366-538 |
1.19e-03 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 42.23 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 366 YLDLSQNLLSDLTIVPTLSTSFGAYQNLITLNVSQNVLKSLGLMSQLATNLKSLTYLDLSHNSFISMPEKCSWPATLRFL 445
Cdd:COG4886 1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 446 NLSSTKLRKMTPCLPSSLTVLDLSENDLKvfnQRFPQLVTLILTGNRFINLPQG-ELFPRLQMLLIQRNALRMFNrSDFK 524
Cdd:COG4886 81 LLSLLLLGLTDLGDLTNLTELDLSGNEEL---SNLTNLESLDLSGNQLTDLPEElANLTNLKELDLSNNQLTDLP-EPLG 156
|
170
....*....|....
gi 2558941269 525 RFKNLQYLEAGDNN 538
Cdd:COG4886 157 NLTNLKSLDLSNNQ 170
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
361-491 |
1.71e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 40.54 E-value: 1.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 361 LKKLEYLDLSQNLLSDLTivptlstSFGAYQNLITLNVSQN---VLKSLglmsqlaTNLKSLTYLDLSH------NSFIS 431
Cdd:cd21340 45 LTNLTHLYLQNNQIEKIE-------NLENLVNLKKLYLGGNrisVVEGL-------ENLTNLEELHIENqrlppgEKLTF 110
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2558941269 432 MPEKCSWPA-TLRFLNLSSTKLRKMTPCLP-SSLTVLDLSENDLKVFNQ------RFPQLVTLILTGN 491
Cdd:cd21340 111 DPRSLAALSnSLRVLNISGNNIDSLEPLAPlRNLEQLDASNNQISDLEElldllsSWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
103-156 |
2.03e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 37.12 E-value: 2.03e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2558941269 103 KLEVLDLSLNNLKNLSSSWFHELNSLQQLNLVGNPYTTLGPApIFQSLLNLRTL 156
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPG-AFSGLPSLRYL 54
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
360-433 |
2.73e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 40.15 E-value: 2.73e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2558941269 360 LLKKLEYLDLSQNLLSDLTivptlstSFGAYQNLITLNVSQNVLKSLGLMSQLATNLKSLTYLDLSHNSFISMP 433
Cdd:cd21340 118 LSNSLRVLNISGNNIDSLE-------PLAPLRNLEQLDASNNQISDLEELLDLLSSWPSLRELDLTGNPVCKKP 184
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
389-457 |
2.78e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 41.34 E-value: 2.78e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2558941269 389 AYQNLITLNVSQNVLKslGLMSQLATNLKSLTYLDLSHNSFI-SMPEKCSWPATLRFLNLSSTKLRKMTP 457
Cdd:PLN03150 440 KLRHLQSINLSGNSIR--GNIPPSLGSITSLEVLDLSYNSFNgSIPESLGQLTSLRILNLNGNSLSGRVP 507
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
361-429 |
6.37e-03 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 39.65 E-value: 6.37e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2558941269 361 LKKLEYLDLSQNLLSDLTIVPTLSTSFGAYQNLITLNVSQNVLKSLGLMS--QLATNLKSLTYLDLSHNSF 429
Cdd:cd00116 220 LKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDlaEVLAEKESLLELDLRGNKF 290
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
391-452 |
7.81e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.58 E-value: 7.81e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2558941269 391 QNLITLNVSQNVLKSLGlmSQLATNLKSLTYLDLSHNSFISMPEKCSWP-ATLRFLNLSSTKL 452
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLD--DGAFKGLSNLKVLDLSNNLLTTLSPGAFSGlPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
481-539 |
8.97e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.19 E-value: 8.97e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2558941269 481 PQLVTLILTGNRFINLPQGELF--PRLQMLLIQRNALRMFNRSDFKRFKNLQYLEAGDNNF 539
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKglSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| |
