|
Name |
Accession |
Description |
Interval |
E-value |
| PLN02193 super family |
cl31837 |
nitrile-specifier protein |
54-358 |
5.84e-18 |
|
nitrile-specifier protein
The actual alignment was detected with superfamily member PLN02193:
Pssm-ID: 177844 [Multi-domain] Cd Length: 470 Bit Score: 89.24 E-value: 5.84e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 54 RWKRV-VNPTGPQPRPRHGHRAISIKelMVVFGGG---NEGIVDELHVYNTISNQWFVPVMKGEVPP-GCAAYGFVVEGT 128
Cdd:PLN02193 152 KWIKVeQKGEGPGLRCSHGIAQVGNK--IYSFGGEftpNQPIDKHLYVFDLETRTWSISPATGDVPHlSCLGVRMVSIGS 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 129 RMFVFGGMIEYGKYsNELYELQATKWEWRKMAPemPDNGlpPCPRLGHSFTMVGDRIYLFGGLANESDdpknnipkylnd 208
Cdd:PLN02193 230 TLYVFGGRDASRQY-NGFYSFDTTTNEWKLLTP--VEEG--PTPRSFHSMAADEENVYVFGGVSATAR------------ 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 209 lyiLETKGNYSsngkwLIPKTYGESPPPRESHTGVAYTCKTTRQLNLLVYGGMSGCRLGDLWLLDIESMTWTKPITKGRA 288
Cdd:PLN02193 293 ---LKTLDSYN-----IVDKKWFHCSTPGDSFSIRGGAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVR 364
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 289 PLPRSLHSATMVGNKMYVFGGWVPLvvnDSKsATEREWKCTNTLAVLDLDSMNWEDITLDTVEEHVPRAR 358
Cdd:PLN02193 365 PSERSVFASAAVGKHIVIFGGEIAM---DPL-AHVGPGQLTDGTFALDTETLQWERLDKFGEEEETPSSR 430
|
|
| COG4625 super family |
cl34793 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
588-1051 |
1.64e-05 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
The actual alignment was detected with superfamily member COG4625:
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 49.78 E-value: 1.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 588 SAGVSMTTSIVVASPAVSSTAKIITPPNTPTNSIQTIVSAPITGTVQGGTVLQKFRPATVLSRTANTNSSGGTGLRVVSG 667
Cdd:COG4625 64 GGGGGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGG 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 668 NPPVRILSGGQAVRIATTQGSSTTILKTSTGQTVGAPTSIATATTIGGKQYFIQKPLSLGQNVQFQLIKTSTGVAVqtlp 747
Cdd:COG4625 144 GGGGGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGG---- 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 748 kVNVLKNIPGGTAGQNQVQTVQTSQTTTLAKPTVVTGNLVKLVSPGGKIVMKNPIVPIGKVGGNVTGKPAFVITNkqGQQ 827
Cdd:COG4625 220 -GGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGG--GGG 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 828 LRPNQQIIIVTTGSAIRTVNTGVVTSAGGNIVSIVGSQSNSITSSGTGAVAGTGTTNTGPGSQSGGMKMLRGVTSATGRP 907
Cdd:COG4625 297 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGG 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 908 ITLTLPTNMNQAKQTQGGQIVQQFPQKTITLGGKAVTVQMSNNSAGVPKTVTIVSSANAVS-GAGTVTLTTGAQGKLVMM 986
Cdd:COG4625 377 SGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGtGAGGGGATGGGGGGGGGA 456
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2503835251 987 PNKKNFVFGPNAGAAGAIGIHKSAIQNIQQQTIVSQQKVITHENNETTNIPNTVYTSDNAFIEGD 1051
Cdd:COG4625 457 GGSGGGAGAGGGSGSGAGTLTLTGNNTYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVTGT 521
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1615-1717 |
4.56e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
:
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 40.94 E-value: 4.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 1615 PGAPSAIKISK-SPEGAHLTWEPPPSQNtGEIIEYSVYlavkstpKDKMPPPQLVFVRVYVGATNQCTVANNSLATAHVd 1693
Cdd:cd00063 1 PSPPTNLRVTDvTSTSVTLSWTPPEDDG-GPITGYVVE-------YREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYE- 71
|
90 100
....*....|....*....|....
gi 2503835251 1694 csnkpaiiFRIAARNEKGYGPATQ 1717
Cdd:cd00063 72 --------FRVRAVNGGGESPPSE 87
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1579-1609 |
7.43e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
:
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 40.56 E-value: 7.43e-04
10 20 30
....*....|....*....|....*....|.
gi 2503835251 1579 NLEPGTGYRFRLAAINTCGRGEWGEVSSFKT 1609
Cdd:cd00063 63 GLKPGTEYEFRVRAVNGGGESPPSESVTVTT 93
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN02193 |
PLN02193 |
nitrile-specifier protein |
54-358 |
5.84e-18 |
|
nitrile-specifier protein
Pssm-ID: 177844 [Multi-domain] Cd Length: 470 Bit Score: 89.24 E-value: 5.84e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 54 RWKRV-VNPTGPQPRPRHGHRAISIKelMVVFGGG---NEGIVDELHVYNTISNQWFVPVMKGEVPP-GCAAYGFVVEGT 128
Cdd:PLN02193 152 KWIKVeQKGEGPGLRCSHGIAQVGNK--IYSFGGEftpNQPIDKHLYVFDLETRTWSISPATGDVPHlSCLGVRMVSIGS 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 129 RMFVFGGMIEYGKYsNELYELQATKWEWRKMAPemPDNGlpPCPRLGHSFTMVGDRIYLFGGLANESDdpknnipkylnd 208
Cdd:PLN02193 230 TLYVFGGRDASRQY-NGFYSFDTTTNEWKLLTP--VEEG--PTPRSFHSMAADEENVYVFGGVSATAR------------ 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 209 lyiLETKGNYSsngkwLIPKTYGESPPPRESHTGVAYTCKTTRQLNLLVYGGMSGCRLGDLWLLDIESMTWTKPITKGRA 288
Cdd:PLN02193 293 ---LKTLDSYN-----IVDKKWFHCSTPGDSFSIRGGAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVR 364
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 289 PLPRSLHSATMVGNKMYVFGGWVPLvvnDSKsATEREWKCTNTLAVLDLDSMNWEDITLDTVEEHVPRAR 358
Cdd:PLN02193 365 PSERSVFASAAVGKHIVIFGGEIAM---DPL-AHVGPGQLTDGTFALDTETLQWERLDKFGEEEETPSSR 430
|
|
| NanM |
COG3055 |
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis]; |
61-380 |
8.13e-18 |
|
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442289 [Multi-domain] Cd Length: 277 Bit Score: 85.59 E-value: 8.13e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 61 PTGPQPRPRHGHRAISIKELMVVFGGGNEG-IVDELHVYNTISNQWFvpvmKGEVPPGCAAYGF--VVEGTRMFVFGGMI 137
Cdd:COG3055 5 SLPDLPTPRSEAAAALLDGKVYVAGGLSGGsASNSFEVYDPATNTWS----ELAPLPGPPRHHAaaVAQDGKLYVFGGFT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 138 EY---GKYSNELYELQATKWEWRKMAPempdnglPPCPRLGHSFTMVGDRIYLFGGlanesddpkNNIPKYLNDLYILET 214
Cdd:COG3055 81 GAnpsSTPLNDVYVYDPATNTWTKLAP-------MPTPRGGATALLLDGKIYVVGG---------WDDGGNVAWVEVYDP 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 215 KGNyssngKWlipKTYGESPPPRESHTGVAYTckttrQLNLLVYGGMSGcrlgdlwllDIESMTWTkpiTKGRAPLPRSL 294
Cdd:COG3055 145 ATG-----TW---TQLAPLPTPRDHLAAAVLP-----DGKILVIGGRNG---------SGFSNTWT---TLAPLPTARAG 199
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 295 HSATMVGNKMYVFGGwvplvvndsksaterEWKCTNTLAVLDLDSMNWEDITldtveeHVPRARAGHCAVGIQSRLYVWS 374
Cdd:COG3055 200 HAAAVLGGKILVFGG---------------ESGFSDEVEAYDPATNTWTALG------ELPTPRHGHAAVLTDGKVYVIG 258
|
....*...
gi 2503835251 375 G--RDGYR 380
Cdd:COG3055 259 GetKPGVR 266
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
588-1051 |
1.64e-05 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 49.78 E-value: 1.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 588 SAGVSMTTSIVVASPAVSSTAKIITPPNTPTNSIQTIVSAPITGTVQGGTVLQKFRPATVLSRTANTNSSGGTGLRVVSG 667
Cdd:COG4625 64 GGGGGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGG 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 668 NPPVRILSGGQAVRIATTQGSSTTILKTSTGQTVGAPTSIATATTIGGKQYFIQKPLSLGQNVQFQLIKTSTGVAVqtlp 747
Cdd:COG4625 144 GGGGGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGG---- 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 748 kVNVLKNIPGGTAGQNQVQTVQTSQTTTLAKPTVVTGNLVKLVSPGGKIVMKNPIVPIGKVGGNVTGKPAFVITNkqGQQ 827
Cdd:COG4625 220 -GGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGG--GGG 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 828 LRPNQQIIIVTTGSAIRTVNTGVVTSAGGNIVSIVGSQSNSITSSGTGAVAGTGTTNTGPGSQSGGMKMLRGVTSATGRP 907
Cdd:COG4625 297 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGG 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 908 ITLTLPTNMNQAKQTQGGQIVQQFPQKTITLGGKAVTVQMSNNSAGVPKTVTIVSSANAVS-GAGTVTLTTGAQGKLVMM 986
Cdd:COG4625 377 SGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGtGAGGGGATGGGGGGGGGA 456
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2503835251 987 PNKKNFVFGPNAGAAGAIGIHKSAIQNIQQQTIVSQQKVITHENNETTNIPNTVYTSDNAFIEGD 1051
Cdd:COG4625 457 GGSGGGAGAGGGSGSGAGTLTLTGNNTYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVTGT 521
|
|
| Kelch_5 |
pfam13854 |
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ... |
170-217 |
8.15e-05 |
|
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.
Pssm-ID: 433528 [Multi-domain] Cd Length: 41 Bit Score: 41.40 E-value: 8.15e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 2503835251 170 PCPRLGHSFTMVGDRIYLFGGLANESDdpknnipKYLNDLYILETKGN 217
Cdd:pfam13854 1 PVPRYGHCAVTVGDYIYLYGGYTGGEG-------QPSDDVYVLSLPTF 41
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1615-1717 |
4.56e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 40.94 E-value: 4.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 1615 PGAPSAIKISK-SPEGAHLTWEPPPSQNtGEIIEYSVYlavkstpKDKMPPPQLVFVRVYVGATNQCTVANNSLATAHVd 1693
Cdd:cd00063 1 PSPPTNLRVTDvTSTSVTLSWTPPEDDG-GPITGYVVE-------YREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYE- 71
|
90 100
....*....|....*....|....
gi 2503835251 1694 csnkpaiiFRIAARNEKGYGPATQ 1717
Cdd:cd00063 72 --------FRVRAVNGGGESPPSE 87
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1579-1609 |
7.43e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 40.56 E-value: 7.43e-04
10 20 30
....*....|....*....|....*....|.
gi 2503835251 1579 NLEPGTGYRFRLAAINTCGRGEWGEVSSFKT 1609
Cdd:cd00063 63 GLKPGTEYEFRVRAVNGGGESPPSESVTVTT 93
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1615-1713 |
5.69e-03 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 37.59 E-value: 5.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 1615 PGAPSAIKISK-SPEGAHLTWEPPPSQN-TGEIIEYSVylavkstpKDKMPPPQLVFVRVyVGATNQCTVANNSLATAHV 1692
Cdd:smart00060 1 PSPPSNLRVTDvTSTSVTLSWEPPPDDGiTGYIVGYRV--------EYREEGSEWKEVNV-TPSSTSYTLTGLKPGTEYE 71
|
90 100
....*....|....*....|.
gi 2503835251 1693 dcsnkpaiiFRIAARNEKGYG 1713
Cdd:smart00060 72 ---------FRVRAVNGAGEG 83
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN02193 |
PLN02193 |
nitrile-specifier protein |
54-358 |
5.84e-18 |
|
nitrile-specifier protein
Pssm-ID: 177844 [Multi-domain] Cd Length: 470 Bit Score: 89.24 E-value: 5.84e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 54 RWKRV-VNPTGPQPRPRHGHRAISIKelMVVFGGG---NEGIVDELHVYNTISNQWFVPVMKGEVPP-GCAAYGFVVEGT 128
Cdd:PLN02193 152 KWIKVeQKGEGPGLRCSHGIAQVGNK--IYSFGGEftpNQPIDKHLYVFDLETRTWSISPATGDVPHlSCLGVRMVSIGS 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 129 RMFVFGGMIEYGKYsNELYELQATKWEWRKMAPemPDNGlpPCPRLGHSFTMVGDRIYLFGGLANESDdpknnipkylnd 208
Cdd:PLN02193 230 TLYVFGGRDASRQY-NGFYSFDTTTNEWKLLTP--VEEG--PTPRSFHSMAADEENVYVFGGVSATAR------------ 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 209 lyiLETKGNYSsngkwLIPKTYGESPPPRESHTGVAYTCKTTRQLNLLVYGGMSGCRLGDLWLLDIESMTWTKPITKGRA 288
Cdd:PLN02193 293 ---LKTLDSYN-----IVDKKWFHCSTPGDSFSIRGGAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVR 364
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 289 PLPRSLHSATMVGNKMYVFGGWVPLvvnDSKsATEREWKCTNTLAVLDLDSMNWEDITLDTVEEHVPRAR 358
Cdd:PLN02193 365 PSERSVFASAAVGKHIVIFGGEIAM---DPL-AHVGPGQLTDGTFALDTETLQWERLDKFGEEEETPSSR 430
|
|
| NanM |
COG3055 |
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis]; |
61-380 |
8.13e-18 |
|
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442289 [Multi-domain] Cd Length: 277 Bit Score: 85.59 E-value: 8.13e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 61 PTGPQPRPRHGHRAISIKELMVVFGGGNEG-IVDELHVYNTISNQWFvpvmKGEVPPGCAAYGF--VVEGTRMFVFGGMI 137
Cdd:COG3055 5 SLPDLPTPRSEAAAALLDGKVYVAGGLSGGsASNSFEVYDPATNTWS----ELAPLPGPPRHHAaaVAQDGKLYVFGGFT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 138 EY---GKYSNELYELQATKWEWRKMAPempdnglPPCPRLGHSFTMVGDRIYLFGGlanesddpkNNIPKYLNDLYILET 214
Cdd:COG3055 81 GAnpsSTPLNDVYVYDPATNTWTKLAP-------MPTPRGGATALLLDGKIYVVGG---------WDDGGNVAWVEVYDP 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 215 KGNyssngKWlipKTYGESPPPRESHTGVAYTckttrQLNLLVYGGMSGcrlgdlwllDIESMTWTkpiTKGRAPLPRSL 294
Cdd:COG3055 145 ATG-----TW---TQLAPLPTPRDHLAAAVLP-----DGKILVIGGRNG---------SGFSNTWT---TLAPLPTARAG 199
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 295 HSATMVGNKMYVFGGwvplvvndsksaterEWKCTNTLAVLDLDSMNWEDITldtveeHVPRARAGHCAVGIQSRLYVWS 374
Cdd:COG3055 200 HAAAVLGGKILVFGG---------------ESGFSDEVEAYDPATNTWTALG------ELPTPRHGHAAVLTDGKVYVIG 258
|
....*...
gi 2503835251 375 G--RDGYR 380
Cdd:COG3055 259 GetKPGVR 266
|
|
| PLN02153 |
PLN02153 |
epithiospecifier protein |
62-311 |
8.06e-14 |
|
epithiospecifier protein
Pssm-ID: 177814 [Multi-domain] Cd Length: 341 Bit Score: 75.02 E-value: 8.06e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 62 TGPQPRPRHGHRAISIKelMVVFGGG---NEGIVDELHVYNTISNQWFVPVMKGEVPP-GCAAYGFVVEGTRMFVFGGMI 137
Cdd:PLN02153 18 KGPGPRCSHGIAVVGDK--LYSFGGElkpNEHIDKDLYVFDFNTHTWSIAPANGDVPRiSCLGVRMVAVGTKLYIFGGRD 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 138 EYGKYSNeLYELQATKWEWRKMAPEMPDNGlpPCPRLGHSFTMVGDRIYLFGGLaneSDDPKNNIPKYLndlyilETKGN 217
Cdd:PLN02153 96 EKREFSD-FYSYDTVKNEWTFLTKLDEEGG--PEARTFHSMASDENHVYVFGGV---SKGGLMKTPERF------RTIEA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 218 YS-SNGKWLIPKTYGESPPPR--------ESHTGVAYTCKTTrqlnlLVYGGMSGCRLGDLWLLDIESMTWTKPITKGRA 288
Cdd:PLN02153 164 YNiADGKWVQLPDPGENFEKRggagfavvQGKIWVVYGFATS-----ILPGGKSDYESNAVQFFDPASGKWTEVETTGAK 238
|
250 260
....*....|....*....|...
gi 2503835251 289 PLPRSLHSATMVGNKMYVFGGWV 311
Cdd:PLN02153 239 PSARSVFAHAVVGKYIIIFGGEV 261
|
|
| PLN02153 |
PLN02153 |
epithiospecifier protein |
155-309 |
6.87e-09 |
|
epithiospecifier protein
Pssm-ID: 177814 [Multi-domain] Cd Length: 341 Bit Score: 59.61 E-value: 6.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 155 EWRKMAPEmpdNGLPPCPRLGHSFTMVGDRIYLFGGLANesddPKNNIPKylnDLYILetkgnYSSNGKWLIPKTYGEsp 234
Cdd:PLN02153 8 GWIKVEQK---GGKGPGPRCSHGIAVVGDKLYSFGGELK----PNEHIDK---DLYVF-----DFNTHTWSIAPANGD-- 70
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2503835251 235 PPRESHTGVAYTCKTTRqlnLLVYGGMSGCR-LGDLWLLDIESMTWT--KPITKGRAPLPRSLHSATMVGNKMYVFGG 309
Cdd:PLN02153 71 VPRISCLGVRMVAVGTK---LYIFGGRDEKReFSDFYSYDTVKNEWTflTKLDEEGGPEARTFHSMASDENHVYVFGG 145
|
|
| PLN02193 |
PLN02193 |
nitrile-specifier protein |
228-381 |
3.83e-06 |
|
nitrile-specifier protein
Pssm-ID: 177844 [Multi-domain] Cd Length: 470 Bit Score: 51.49 E-value: 3.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 228 KTY-GESPPPRESHTGVAYTCKTT-------RQLNLLVYGGMSGCRLGDLWLLDiesmTWTKPITKGRAPLPRSLHSATM 299
Cdd:PLN02193 98 KTYkGKTSHPIEKRPGVKFVLQGGkivgfhgRSTDVLHSLGAYISLPSTPKLLG----KWIKVEQKGEGPGLRCSHGIAQ 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 300 VGNKMYVFGG-WVPLVVNDSKsaterewkctntLAVLDLDSMNWediTLDTVEEHVPRARA-GHCAVGIQSRLYVWSGRD 377
Cdd:PLN02193 174 VGNKIYSFGGeFTPNQPIDKH------------LYVFDLETRTW---SISPATGDVPHLSClGVRMVSIGSTLYVFGGRD 238
|
....
gi 2503835251 378 GYRK 381
Cdd:PLN02193 239 ASRQ 242
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
588-1051 |
1.64e-05 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 49.78 E-value: 1.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 588 SAGVSMTTSIVVASPAVSSTAKIITPPNTPTNSIQTIVSAPITGTVQGGTVLQKFRPATVLSRTANTNSSGGTGLRVVSG 667
Cdd:COG4625 64 GGGGGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGG 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 668 NPPVRILSGGQAVRIATTQGSSTTILKTSTGQTVGAPTSIATATTIGGKQYFIQKPLSLGQNVQFQLIKTSTGVAVqtlp 747
Cdd:COG4625 144 GGGGGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGG---- 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 748 kVNVLKNIPGGTAGQNQVQTVQTSQTTTLAKPTVVTGNLVKLVSPGGKIVMKNPIVPIGKVGGNVTGKPAFVITNkqGQQ 827
Cdd:COG4625 220 -GGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGG--GGG 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 828 LRPNQQIIIVTTGSAIRTVNTGVVTSAGGNIVSIVGSQSNSITSSGTGAVAGTGTTNTGPGSQSGGMKMLRGVTSATGRP 907
Cdd:COG4625 297 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGG 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 908 ITLTLPTNMNQAKQTQGGQIVQQFPQKTITLGGKAVTVQMSNNSAGVPKTVTIVSSANAVS-GAGTVTLTTGAQGKLVMM 986
Cdd:COG4625 377 SGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGtGAGGGGATGGGGGGGGGA 456
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2503835251 987 PNKKNFVFGPNAGAAGAIGIHKSAIQNIQQQTIVSQQKVITHENNETTNIPNTVYTSDNAFIEGD 1051
Cdd:COG4625 457 GGSGGGAGAGGGSGSGAGTLTLTGNNTYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVTGT 521
|
|
| NanM |
COG3055 |
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis]; |
61-150 |
2.28e-05 |
|
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442289 [Multi-domain] Cd Length: 277 Bit Score: 48.23 E-value: 2.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 61 PTGPQPRPRHGHRAISIKELMVVFGGGNeGIVDELHVYNTISNQWFVpvmKGEVPPGCAAYGFVVEGTRMFVFGGMIEYG 140
Cdd:COG3055 189 TLAPLPTARAGHAAAVLGGKILVFGGES-GFSDEVEAYDPATNTWTA---LGELPTPRHGHAAVLTDGKVYVIGGETKPG 264
|
90
....*....|
gi 2503835251 141 KYSNELYELQ 150
Cdd:COG3055 265 VRTPLVTSAE 274
|
|
| Kelch_5 |
pfam13854 |
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ... |
170-217 |
8.15e-05 |
|
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.
Pssm-ID: 433528 [Multi-domain] Cd Length: 41 Bit Score: 41.40 E-value: 8.15e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 2503835251 170 PCPRLGHSFTMVGDRIYLFGGLANESDdpknnipKYLNDLYILETKGN 217
Cdd:pfam13854 1 PVPRYGHCAVTVGDYIYLYGGYTGGEG-------QPSDDVYVLSLPTF 41
|
|
| Kelch_3 |
pfam13415 |
Galactose oxidase, central domain; |
182-245 |
1.80e-04 |
|
Galactose oxidase, central domain;
Pssm-ID: 433188 [Multi-domain] Cd Length: 49 Bit Score: 40.74 E-value: 1.80e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2503835251 182 GDRIYLFGGLanesdDPKNNipKYLNDLYILETkgnysSNGKWlipKTYGESPPPRESHTGVAY 245
Cdd:pfam13415 1 GDKLYIFGGL-----GFDGQ--TRLNDLYVYDL-----DTNTW---TQIGDLPPPRSGHSATYI 49
|
|
| Kelch_3 |
pfam13415 |
Galactose oxidase, central domain; |
255-298 |
1.89e-04 |
|
Galactose oxidase, central domain;
Pssm-ID: 433188 [Multi-domain] Cd Length: 49 Bit Score: 40.74 E-value: 1.89e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 2503835251 255 LLVYGG---MSGCRLGDLWLLDIESMTWTKPitkGRAPLPRSLHSAT 298
Cdd:pfam13415 4 LYIFGGlgfDGQTRLNDLYVYDLDTNTWTQI---GDLPPPRSGHSAT 47
|
|
| PHA03098 |
PHA03098 |
kelch-like protein; Provisional |
92-317 |
2.99e-04 |
|
kelch-like protein; Provisional
Pssm-ID: 222983 [Multi-domain] Cd Length: 534 Bit Score: 45.53 E-value: 2.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 92 VDELHVYNTISNQWF-VPVMKgeVPPGCaaYGFVVEGTRMFVFGGmIEYGKYSNELYELQATKWEWRKMAPEMPdnglpp 170
Cdd:PHA03098 310 VNSVVSYDTKTKSWNkVPELI--YPRKN--PGVTVFNNRIYVIGG-IYNSISLNTVESWKPGESKWREEPPLIF------ 378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 171 cPRLGHSFTMVGDRIYLFGGLaNESDDPKNNIPKYlndlyiletkgNYSSNGKWLIpktygeSPPPReSHTGVaytCKTT 250
Cdd:PHA03098 379 -PRYNPCVVNVNNLIYVIGGI-SKNDELLKTVECF-----------SLNTNKWSKG------SPLPI-SHYGG---CAIY 435
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2503835251 251 RQLNLLVYGGMS----GCRLGDLWLLDIESMTWTKpitkgRAPL--PRSLHSATMVGNKMYVFGGWVPLVVND 317
Cdd:PHA03098 436 HDGKIYVIGGISyidnIKVYNIVESYNPVTNKWTE-----LSSLnfPRINASLCIFNNKIYVVGGDKYEYYIN 503
|
|
| NanM |
COG3055 |
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis]; |
289-384 |
4.45e-04 |
|
N-acetylneuraminic acid mutarotase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442289 [Multi-domain] Cd Length: 277 Bit Score: 43.99 E-value: 4.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 289 PLPRSLHSATMVGNKMYVFGGWvplvvndsksateREWKCTNTLAVLDLDSMNWEDIT-LDTVeehvprARAGHCAVGIQ 367
Cdd:COG3055 10 PTPRSEAAAALLDGKVYVAGGL-------------SGGSASNSFEVYDPATNTWSELApLPGP------PRHHAAAVAQD 70
|
90
....*....|....*..
gi 2503835251 368 SRLYVWSGRDGYRKAWN 384
Cdd:COG3055 71 GKLYVFGGFTGANPSST 87
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1615-1717 |
4.56e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 40.94 E-value: 4.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 1615 PGAPSAIKISK-SPEGAHLTWEPPPSQNtGEIIEYSVYlavkstpKDKMPPPQLVFVRVYVGATNQCTVANNSLATAHVd 1693
Cdd:cd00063 1 PSPPTNLRVTDvTSTSVTLSWTPPEDDG-GPITGYVVE-------YREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYE- 71
|
90 100
....*....|....*....|....
gi 2503835251 1694 csnkpaiiFRIAARNEKGYGPATQ 1717
Cdd:cd00063 72 --------FRVRAVNGGGESPPSE 87
|
|
| Kelch_5 |
pfam13854 |
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ... |
115-154 |
6.42e-04 |
|
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.
Pssm-ID: 433528 [Multi-domain] Cd Length: 41 Bit Score: 39.09 E-value: 6.42e-04
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 2503835251 115 PPGCAAYGFVVEGTRMFVFGGMI-EYGKYSNELYELQATKW 154
Cdd:pfam13854 1 PVPRYGHCAVTVGDYIYLYGGYTgGEGQPSDDVYVLSLPTF 41
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1579-1609 |
7.43e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 40.56 E-value: 7.43e-04
10 20 30
....*....|....*....|....*....|.
gi 2503835251 1579 NLEPGTGYRFRLAAINTCGRGEWGEVSSFKT 1609
Cdd:cd00063 63 GLKPGTEYEFRVRAVNGGGESPPSESVTVTT 93
|
|
| PLN02772 |
PLN02772 |
guanylate kinase |
166-276 |
9.45e-04 |
|
guanylate kinase
Pssm-ID: 215414 [Multi-domain] Cd Length: 398 Bit Score: 43.67 E-value: 9.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 166 NGLPPCPRLGHSFTMVGDRIYLFGGlaneSDDPKNnipkYLNDLYILETkgnysSNGKWLIPKTYGESPPPRESHTGVay 245
Cdd:PLN02772 18 NGFGVKPKNRETSVTIGDKTYVIGG----NHEGNT----LSIGVQILDK-----ITNNWVSPIVLGTGPKPCKGYSAV-- 82
|
90 100 110
....*....|....*....|....*....|.
gi 2503835251 246 tckTTRQLNLLVYGGMSGcRLGDLWLLDIES 276
Cdd:PLN02772 83 ---VLNKDRILVIKKGSA-PDDSIWFLEVDT 109
|
|
| Kelch_3 |
pfam13415 |
Galactose oxidase, central domain; |
301-366 |
9.90e-04 |
|
Galactose oxidase, central domain;
Pssm-ID: 433188 [Multi-domain] Cd Length: 49 Bit Score: 38.81 E-value: 9.90e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2503835251 301 GNKMYVFGGWVPlvvndsksatEREwKCTNTLAVLDLDSMNWEDITldtveeHVPRARAGHCAVGI 366
Cdd:pfam13415 1 GDKLYIFGGLGF----------DGQ-TRLNDLYVYDLDTNTWTQIG------DLPPPRSGHSATYI 49
|
|
| PLN02153 |
PLN02153 |
epithiospecifier protein |
279-380 |
1.26e-03 |
|
epithiospecifier protein
Pssm-ID: 177814 [Multi-domain] Cd Length: 341 Bit Score: 43.05 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 279 WTKPITKG-RAPLPRSLHSATMVGNKMYVFGGwvPLVVNDsksATEREwkctntLAVLDLDSMNWediTLDTVEEHVPRA 357
Cdd:PLN02153 9 WIKVEQKGgKGPGPRCSHGIAVVGDKLYSFGG--ELKPNE---HIDKD------LYVFDFNTHTW---SIAPANGDVPRI 74
|
90 100
....*....|....*....|....
gi 2503835251 358 RA-GHCAVGIQSRLYVWSGRDGYR 380
Cdd:PLN02153 75 SClGVRMVAVGTKLYIFGGRDEKR 98
|
|
| PRK14131 |
PRK14131 |
N-acetylneuraminate epimerase; |
45-135 |
4.28e-03 |
|
N-acetylneuraminate epimerase;
Pssm-ID: 237617 [Multi-domain] Cd Length: 376 Bit Score: 41.54 E-value: 4.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 45 MIPLNASSFRWKRVVNPTGPqprPRHGHRAISIKELMVVFGG----GNEG---IVDELHVYNTISNQWfvPVMKGEVPPG 117
Cdd:PRK14131 54 KLDLNAPSKGWTKIAAFPGG---PREQAVAAFIDGKLYVFGGigktNSEGspqVFDDVYKYDPKTNSW--QKLDTRSPVG 128
|
90
....*....|....*....
gi 2503835251 118 CA-AYGFVVEGTRMFVFGG 135
Cdd:PRK14131 129 LAgHVAVSLHNGKAYITGG 147
|
|
| Kelch_4 |
pfam13418 |
Galactose oxidase, central domain; |
172-220 |
4.53e-03 |
|
Galactose oxidase, central domain;
Pssm-ID: 433191 [Multi-domain] Cd Length: 49 Bit Score: 36.82 E-value: 4.53e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 2503835251 172 PRLGHSFTMVG-DRIYLFGGLaNESDdpknnipKYLNDLYILETKGNYSS 220
Cdd:pfam13418 1 PRAYHTSTSIPdDTIYLFGGE-GEDG-------TLLSDLWVFDLSTNEWT 42
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1615-1713 |
5.69e-03 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 37.59 E-value: 5.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2503835251 1615 PGAPSAIKISK-SPEGAHLTWEPPPSQN-TGEIIEYSVylavkstpKDKMPPPQLVFVRVyVGATNQCTVANNSLATAHV 1692
Cdd:smart00060 1 PSPPSNLRVTDvTSTSVTLSWEPPPDDGiTGYIVGYRV--------EYREEGSEWKEVNV-TPSSTSYTLTGLKPGTEYE 71
|
90 100
....*....|....*....|.
gi 2503835251 1693 dcsnkpaiiFRIAARNEKGYG 1713
Cdd:smart00060 72 ---------FRVRAVNGAGEG 83
|
|
| Kelch_1 |
pfam01344 |
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six ... |
68-105 |
6.24e-03 |
|
Kelch motif; The kelch motif was initially discovered in Kelch. In this protein there are six copies of the motif. It has been shown that Swiss:Q04652 is related to Galactose Oxidase for which a structure has been solved. The kelch motif forms a beta sheet. Several of these sheets associate to form a beta propeller structure as found in pfam00064, pfam00400 and pfam00415.
Pssm-ID: 396078 [Multi-domain] Cd Length: 46 Bit Score: 36.44 E-value: 6.24e-03
10 20 30
....*....|....*....|....*....|....*....
gi 2503835251 68 PRHGHRAISIKELMVVFGGGNEG-IVDELHVYNTISNQW 105
Cdd:pfam01344 1 RRSGAGVVVVGGKIYVIGGFDGNqSLNSVEVYDPETNTW 39
|
|
| |
