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Conserved domains on  [gi|2462610372|ref|XP_054212299|]
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zinc finger protein 76 isoform X7 [Homo sapiens]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 11472214)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940
SCOP:  4003583

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
140-306 2.79e-12

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 68.95  E-value: 2.79e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372 140 PSCGKAFATGYGLKSHVRT--HTGE--KPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFQCPFEGCGRSFTTSNIRKVH 215
Cdd:COG5048   293 KQCNISFSRSSPLTRHLRSvnHSGEslKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLNNEPP 372

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372 216 VRTH-----TGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYkHHVVHTHCKPYTCSTC 290
Cdd:COG5048   373 QSLQqykdlKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLI-PHKKIHTNHAPLLCSI 451

                         170
                  ....*....|....*.
gi 2462610372 291 GKTYRQTSTLAMHKRS 306
Cdd:COG5048   452 LKSFRRDLDLSNHGKD 467
SFP1 super family cl25788
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 80-160 1.21e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


The actual alignment was detected with superfamily member COG5189:

Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 44.32  E-value: 1.21e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372  80 RLFPQVLHDSQ--IPRNGKGQQV-GDRAFRCGYKGCGRLYTTAHHLKVH---------------ERAHTG----DRPYRC 137
Cdd:COG5189   322 SSNGKLAHGGErnIDTPSRMLKVkDGKPYKCPVEGCNKKYKNQNGLKYHmlhghqnqklhenpsPEKMNIfsakDKPYRC 401

                          90       100
                  ....*....|....*....|...
gi 2462610372 138 DFpsCGKAFATGYGLKSHvRTHT 160
Cdd:COG5189   402 EV--CDKRYKNLNGLKYH-RKHS 421
PRK10263 super family cl35903
DNA translocase FtsK; Provisional
 219-423 3.27e-04

DNA translocase FtsK; Provisional


The actual alignment was detected with superfamily member PRK10263:

Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 43.54  E-value: 3.27e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372  219 HTGErPYTCPEPHcgrGFTSATNYKNHVRIHTG--EKPYVCTVPGCGKRFTEYSS--LYKHHVVHTHCKPYTCSTCGKTY 294
Cdd:PRK10263   367 QTGE-PVIAPAPE---GYPQQSQYAQPAVQYNEplQQPVQPQQPYYAPAAEQPAQqpYYAPAPEQPAQQPYYAPAPEQPV 442

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372  295 RQTSTLAMHKRSaHGELEATEESEQALYE---QQQLEAASAAEESPP------------PKRPRIAYLSEVKE----ERD 355
Cdd:PRK10263   443 AGNAWQAEEQQS-TFAPQSTYQTEQTYQQpaaQEPLYQQPQPVEQQPvvepepvveetkPARPPLYYFEEVEEkrarERE 521

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462610372  356 DIPAQVAMVTEEDGAPQVALITQDGAQQVSLSPEDLQA----LGSAISMVTQHGSTTLTIPSPDADLATSGT 423
Cdd:PRK10263   522 QLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAavspLASGVKKATLATGAAATVAAPVFSLANSGG 593
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
140-306 2.79e-12

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 68.95  E-value: 2.79e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372 140 PSCGKAFATGYGLKSHVRT--HTGE--KPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFQCPFEGCGRSFTTSNIRKVH 215
Cdd:COG5048   293 KQCNISFSRSSPLTRHLRSvnHSGEslKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLNNEPP 372

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372 216 VRTH-----TGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYkHHVVHTHCKPYTCSTC 290
Cdd:COG5048   373 QSLQqykdlKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLI-PHKKIHTNHAPLLCSI 451

                         170
                  ....*....|....*.
gi 2462610372 291 GKTYRQTSTLAMHKRS 306
Cdd:COG5048   452 LKSFRRDLDLSNHGKD 467
zf-H2C2_2 pfam13465
Zinc-finger double domain;
152-178 6.37e-06

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 42.74  E-value: 6.37e-06
                          10        20
                  ....*....|....*....|....*..
gi 2462610372 152 LKSHVRTHTGEKPYKCPEelCSKAFKT 178
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPE--CGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 80-160 1.21e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 44.32  E-value: 1.21e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372  80 RLFPQVLHDSQ--IPRNGKGQQV-GDRAFRCGYKGCGRLYTTAHHLKVH---------------ERAHTG----DRPYRC 137
Cdd:COG5189   322 SSNGKLAHGGErnIDTPSRMLKVkDGKPYKCPVEGCNKKYKNQNGLKYHmlhghqnqklhenpsPEKMNIfsakDKPYRC 401

                          90       100
                  ....*....|....*....|...
gi 2462610372 138 DFpsCGKAFATGYGLKSHvRTHT 160
Cdd:COG5189   402 EV--CDKRYKNLNGLKYH-RKHS 421
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 219-423 3.27e-04

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 43.54  E-value: 3.27e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372  219 HTGErPYTCPEPHcgrGFTSATNYKNHVRIHTG--EKPYVCTVPGCGKRFTEYSS--LYKHHVVHTHCKPYTCSTCGKTY 294
Cdd:PRK10263   367 QTGE-PVIAPAPE---GYPQQSQYAQPAVQYNEplQQPVQPQQPYYAPAAEQPAQqpYYAPAPEQPAQQPYYAPAPEQPV 442

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372  295 RQTSTLAMHKRSaHGELEATEESEQALYE---QQQLEAASAAEESPP------------PKRPRIAYLSEVKE----ERD 355
Cdd:PRK10263   443 AGNAWQAEEQQS-TFAPQSTYQTEQTYQQpaaQEPLYQQPQPVEQQPvvepepvveetkPARPPLYYFEEVEEkrarERE 521

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462610372  356 DIPAQVAMVTEEDGAPQVALITQDGAQQVSLSPEDLQA----LGSAISMVTQHGSTTLTIPSPDADLATSGT 423
Cdd:PRK10263   522 QLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAavspLASGVKKATLATGAAATVAAPVFSLANSGG 593
zf-H2C2_2 pfam13465
Zinc-finger double domain;
121-148 2.16e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 2.16e-03
                          10        20
                  ....*....|....*....|....*...
gi 2462610372 121 HLKVHERAHTGDRPYRCdfPSCGKAFAT 148
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKC--PECGKSFKS 26
PHA00733 PHA00733
hypothetical protein
 254-303 5.09e-03

hypothetical protein


Pssm-ID: 177301  Cd Length: 128  Bit Score: 37.16  E-value: 5.09e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 2462610372 254 PYVCtvPGCGKRFTEYSSLYKHHVVHTHCKpyTCSTCGKTYRQTSTLAMH 303
Cdd:PHA00733   73 PYVC--PLCLMPFSSSVSLKQHIRYTEHSK--VCPVCGKEFRNTDSTLDH 118
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
140-306 2.79e-12

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 68.95  E-value: 2.79e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372 140 PSCGKAFATGYGLKSHVRT--HTGE--KPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFQCPFEGCGRSFTTSNIRKVH 215
Cdd:COG5048   293 KQCNISFSRSSPLTRHLRSvnHSGEslKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLNNEPP 372

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372 216 VRTH-----TGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYkHHVVHTHCKPYTCSTC 290
Cdd:COG5048   373 QSLQqykdlKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLI-PHKKIHTNHAPLLCSI 451

                         170
                  ....*....|....*.
gi 2462610372 291 GKTYRQTSTLAMHKRS 306
Cdd:COG5048   452 LKSFRRDLDLSNHGKD 467
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
110-276 1.06e-11

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 67.03  E-value: 1.06e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372 110 KGCGRLYTTAHHLKVHERA--HTG--DRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAF------KTS 179
Cdd:COG5048   293 KQCNISFSRSSPLTRHLRSvnHSGesLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFspllnnEPP 372

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372 180 GDLQKHVRTHTgERPFQCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCtv 259
Cdd:COG5048   373 QSLQQYKDLKN-DKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLC-- 449

                         170
                  ....*....|....*..
gi 2462610372 260 pgCGKRFTEYSSLYKHH 276
Cdd:COG5048   450 --SILKSFRRDLDLSNH 464
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
163-308 1.88e-10

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 63.18  E-value: 1.88e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372 163 KPYKCPEelCSKAFKTSGDLQKHVRT--HTGE--RPFQCPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTS 238
Cdd:COG5048   288 LPIKSKQ--CNISFSRSSPLTRHLRSvnHSGEslKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSP 365

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462610372 239 ATNYKNHVRIH-----TGEKPYVCTVPGCGKRFTEYSSLYKHHVVH----THCkpYTCSTCGKTYRQTSTLAMHKRSAH 308
Cdd:COG5048   366 LLNNEPPQSLQqykdlKNDKKSETLSNSCIRNFKRDSNLSLHIITHlsfrPYN--CKNPPCSKSFNRHYNLIPHKKIHT 442
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 191-281 2.67e-08

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 56.26  E-value: 2.67e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372 191 GERPFQCPFEGCGRSFTTSNIRKVH-VRTHTGERPYTCPEPHCGRGFTSAtnyknhvrihtgEKPYVCTVpgCGKRFTEY 269
Cdd:COG5189   346 DGKPYKCPVEGCNKKYKNQNGLKYHmLHGHQNQKLHENPSPEKMNIFSAK------------DKPYRCEV--CDKRYKNL 411

                          90
                  ....*....|..
gi 2462610372 270 SSLyKHHVVHTH 281
Cdd:COG5189   412 NGL-KYHRKHSH 422
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 251-308 3.97e-08

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 55.49  E-value: 3.97e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462610372 251 GEKPYVCTVPGCGKRFTEYSSLyKHHVVHTHC--------------------KPYTCSTCGKTYRQTSTLAMHKRSAH 308
Cdd:COG5189   346 DGKPYKCPVEGCNKKYKNQNGL-KYHMLHGHQnqklhenpspekmnifsakdKPYRCEVCDKRYKNLNGLKYHRKHSH 422
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
223-280 4.46e-06

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 49.31  E-value: 4.46e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2462610372 223 RPYTCPEphCGRGFTSATNYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHT 280
Cdd:COG5048    32 RPDSCPN--CTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHH 87
zf-H2C2_2 pfam13465
Zinc-finger double domain;
152-178 6.37e-06

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 42.74  E-value: 6.37e-06
                          10        20
                  ....*....|....*....|....*..
gi 2462610372 152 LKSHVRTHTGEKPYKCPEelCSKAFKT 178
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPE--CGKSFKS 26
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
132-190 1.56e-05

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 47.38  E-value: 1.56e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2462610372 132 DRPYRCDFpsCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHT 190
Cdd:COG5048    31 PRPDSCPN--CTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHH 87
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 131-220 2.98e-05

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 46.63  E-value: 2.98e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372 131 GDRPYRCDFPSCGKAFATGYGLKSH-VRTHTGEKPYKCPEELCSKAFKTSgdlqkhvrthtgERPFQCPFegCGRSFTTS 209
Cdd:COG5189   346 DGKPYKCPVEGCNKKYKNQNGLKYHmLHGHQNQKLHENPSPEKMNIFSAK------------DKPYRCEV--CDKRYKNL 411

                          90
                  ....*....|.
gi 2462610372 210 NIRKVHvRTHT 220
Cdd:COG5189   412 NGLKYH-RKHS 421
zf-H2C2_2 pfam13465
Zinc-finger double domain;
181-208 5.61e-05

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 40.05  E-value: 5.61e-05
                          10        20
                  ....*....|....*....|....*...
gi 2462610372 181 DLQKHVRTHTGERPFQCPFegCGRSFTT 208
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPE--CGKSFKS 26
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 80-160 1.21e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 44.32  E-value: 1.21e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372  80 RLFPQVLHDSQ--IPRNGKGQQV-GDRAFRCGYKGCGRLYTTAHHLKVH---------------ERAHTG----DRPYRC 137
Cdd:COG5189   322 SSNGKLAHGGErnIDTPSRMLKVkDGKPYKCPVEGCNKKYKNQNGLKYHmlhghqnqklhenpsPEKMNIfsakDKPYRC 401

                          90       100
                  ....*....|....*....|...
gi 2462610372 138 DFpsCGKAFATGYGLKSHvRTHT 160
Cdd:COG5189   402 EV--CDKRYKNLNGLKYH-RKHS 421
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 219-423 3.27e-04

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 43.54  E-value: 3.27e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372  219 HTGErPYTCPEPHcgrGFTSATNYKNHVRIHTG--EKPYVCTVPGCGKRFTEYSS--LYKHHVVHTHCKPYTCSTCGKTY 294
Cdd:PRK10263   367 QTGE-PVIAPAPE---GYPQQSQYAQPAVQYNEplQQPVQPQQPYYAPAAEQPAQqpYYAPAPEQPAQQPYYAPAPEQPV 442

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372  295 RQTSTLAMHKRSaHGELEATEESEQALYE---QQQLEAASAAEESPP------------PKRPRIAYLSEVKE----ERD 355
Cdd:PRK10263   443 AGNAWQAEEQQS-TFAPQSTYQTEQTYQQpaaQEPLYQQPQPVEQQPvvepepvveetkPARPPLYYFEEVEEkrarERE 521

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462610372  356 DIPAQVAMVTEEDGAPQVALITQDGAQQVSLSPEDLQA----LGSAISMVTQHGSTTLTIPSPDADLATSGT 423
Cdd:PRK10263   522 QLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAavspLASGVKKATLATGAAATVAAPVFSLANSGG 593
zf-H2C2_2 pfam13465
Zinc-finger double domain;
241-267 5.05e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 37.35  E-value: 5.05e-04
                          10        20
                  ....*....|....*....|....*..
gi 2462610372 241 NYKNHVRIHTGEKPYVCTVpgCGKRFT 267
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPE--CGKSFK 25
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
163-220 5.76e-04

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 42.38  E-value: 5.76e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2462610372 163 KPYKCPEelCSKAFKTSGDLQKHVRTHTGERPFQCPFEGCGRSFTTSNIRKVHVRTHT 220
Cdd:COG5048    32 RPDSCPN--CTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHH 87
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
132-215 7.47e-04

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 41.99  E-value: 7.47e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462610372 132 DRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFQCpfEGCGRSFTTSNI 211
Cdd:COG5048   384 DKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLC--SILKSFRRDLDL 461


                  ....
gi 2462610372 212 RKVH 215
Cdd:COG5048   462 SNHG 465
zf-H2C2_2 pfam13465
Zinc-finger double domain;
121-148 2.16e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 2.16e-03
                          10        20
                  ....*....|....*....|....*...
gi 2462610372 121 HLKVHERAHTGDRPYRCdfPSCGKAFAT 148
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKC--PECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
213-238 4.34e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 34.65  E-value: 4.34e-03
                          10        20
                  ....*....|....*....|....*.
gi 2462610372 213 KVHVRTHTGERPYTCPEphCGRGFTS 238
Cdd:pfam13465   3 KRHMRTHTGEKPYKCPE--CGKSFKS 26
PHA00733 PHA00733
hypothetical protein
 254-303 5.09e-03

hypothetical protein


Pssm-ID: 177301  Cd Length: 128  Bit Score: 37.16  E-value: 5.09e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 2462610372 254 PYVCtvPGCGKRFTEYSSLYKHHVVHTHCKpyTCSTCGKTYRQTSTLAMH 303
Cdd:PHA00733   73 PYVC--PLCLMPFSSSVSLKQHIRYTEHSK--VCPVCGKEFRNTDSTLDH 118
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
193-254 5.64e-03

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 39.29  E-value: 5.64e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462610372 193 RPFQCPFegCGRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKP 254
Cdd:COG5048    32 RPDSCPN--CTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHHNNPS 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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