|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
667-1429 |
6.38e-25 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 114.00 E-value: 6.38e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 667 LEVQIQTVTQAKEvIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLR-EKWEKERSw 745
Cdd:TIGR02168 205 LERQAEKAERYKE-LKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRlEVSELEEE- 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 746 hQQELAKALESLEREKMELEMRLKEQQTEMEaiQAQREEERTQAESALCQMQLETEKERVSLLETLL-QTQKELADASQQ 824
Cdd:TIGR02168 283 -IEELQKELYALANEISRLEQQKQILRERLA--NLERQLEELEAQLEELESKLDELAEELAELEEKLeELKEELESLEAE 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 825 LERLRQDMKVQKLKEQEttgilqtqLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQ- 903
Cdd:TIGR02168 360 LEELEAELEELESRLEE--------LEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLe 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 904 ----RLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQ 979
Cdd:TIGR02168 432 eaelKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKAL 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 980 ME----------LLRQEVKEKEADFLAQEAQLLEELEA-----SHITEQQLRASLWAQEAKAAQLQLRLRS----TESQL 1040
Cdd:TIGR02168 512 LKnqsglsgilgVLSELISVDEGYEAAIEAALGGRLQAvvvenLNAAKKAIAFLKQNELGRVTFLPLDSIKgteiQGNDR 591
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1041 EALAAEQQPGNQAQAQAQLASLYS-ALQQALGSV-----CESRPELSGGGDSAPSVWGLEPDQNGARSLFKRGPLLTALS 1114
Cdd:TIGR02168 592 EILKNIEGFLGVAKDLVKFDPKLRkALSYLLGGVlvvddLDNALELAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSS 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1115 AEAVASALHKLHQDLWKTQQTRDVLRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELME 1194
Cdd:TIGR02168 672 ILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQ 751
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1195 LHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVEHLQAAVVEARAQASAagiLEEDLRTARSALKLKNEEVES 1274
Cdd:TIGR02168 752 LSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDE---LRAELTLLNEEAANLRERLES 828
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1275 ERERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSLDLKKRNQEVDLQQE 1354
Cdd:TIGR02168 829 LERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELES 908
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462579258 1355 QIQELEKCRSVLEHLPMAVQEREQKLTVQREQIreLEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQL 1429
Cdd:TIGR02168 909 KRSELRRELEELREKLAQLELRLEGLEVRIDNL--QERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKI 981
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
306-929 |
5.12e-22 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 104.25 E-value: 5.12e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 306 EGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKE 385
Cdd:COG1196 226 EAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 386 EQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLK 465
Cdd:COG1196 306 RLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELA 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 466 TEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQL 545
Cdd:COG1196 386 EELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELL 465
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 546 QKAEEAGAELQADLRDIQEEKEEIQKKLS-----ESRHQQEAATTQLEQLHQEAKRQEEVLA--RAVQEKEALVREKAAL 618
Cdd:COG1196 466 AELLEEAALLEAALAELLEELAEAAARLLllleaEADYEGFLEGVKAALLLAGLRGLAGAVAvlIGVEAAYEAALEAALA 545
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 619 EVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEvtkgQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQ 698
Cdd:COG1196 546 AALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAAL----AAALARGAIGAAVDLVASDLREADARYYVLGDT 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 699 AEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAI 778
Cdd:COG1196 622 LLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLA 701
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 779 QAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQEttgiLQTQLQEAQRELK 858
Cdd:COG1196 702 EEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEE----LERELERLEREIE 777
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462579258 859 E------AArqhRDDLAALQEESSSLLQDKMDLQKQVEDLKsQLVAQddsqrlVEQEVQEKLRETqeYNRIQKELER 929
Cdd:COG1196 778 AlgpvnlLA---IEEYEELEERYDFLSEQREDLEEARETLE-EAIEE------IDRETRERFLET--FDAVNENFQE 842
|
|
| Rootletin |
pfam15035 |
Ciliary rootlet component, centrosome cohesion; |
1-90 |
6.41e-22 |
|
Ciliary rootlet component, centrosome cohesion;
Pssm-ID: 464459 [Multi-domain] Cd Length: 190 Bit Score: 95.49 E-value: 6.41e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1 MEKADVVNKALREDVEKLTVDWSRARDELMRKESQWQMEQEFFKGYLKGEHGRLLSLWREVVTFRRHFLEMKSATDRDLM 80
Cdd:pfam15035 101 LEQASRANEALREDLQKLTNDWERAREELEQKESEWRKEEEAFNEYLSSEHSRLLSLWREVVAVRRQFTELKTATERDLS 180
|
90
....*....|
gi 2462579258 81 ELKAEHVRLS 90
Cdd:pfam15035 181 ELKTEFSRTS 190
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
740-1326 |
3.07e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 101.94 E-value: 3.07e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 740 EKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAEsalcqmqlETEKERVSLLETLLQTQKELA 819
Cdd:COG1196 220 EELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELE--------ELRLELEELELELEEAQAEEY 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 820 DASQQLERLRQDMKVQKLKEQettgilqtQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQ 899
Cdd:COG1196 292 ELLAELARLEQDIARLEERRR--------ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEA 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 900 DDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQ 979
Cdd:COG1196 364 EEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEA 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 980 MELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEALAAEQQPGNQAQAQAQL 1059
Cdd:COG1196 444 LEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLA 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1060 ASLysALQQALGSVCESRPELSGGGDSAPSVWGLEPDQNGARSLFKRgplltALSAEAVASALHKLHQDLWKTQQTRDVL 1139
Cdd:COG1196 524 GAV--AVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKA-----AKAGRATFLPLDKIRARAALAAALARGA 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1140 RDQVQKLEERLTDTEAEKSQVHtELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRLRRAELQRMEAQGE 1219
Cdd:COG1196 597 IGAAVDLVASDLREADARYYVL-GDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALL 675
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1220 RELLQAAKENLTAQVEHLQAAVVEARAQASAAGILEEDLRTARSALKLKNEEVESERERAQALQEQGELKVAQGKALQEN 1299
Cdd:COG1196 676 EAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEE 755
|
570 580
....*....|....*....|....*..
gi 2462579258 1300 LALLtQTLAEREEEVETLRGQIQELEK 1326
Cdd:COG1196 756 LPEP-PDLEELERELERLEREIEALGP 781
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
259-784 |
6.59e-21 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 100.78 E-value: 6.59e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 259 QDADKALTLVRSVLTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSL 338
Cdd:COG1196 263 AELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEEL 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 339 SKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSE 418
Cdd:COG1196 343 EEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEE 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 419 LITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQ 498
Cdd:COG1196 423 LEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEAD 502
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 499 LEEENQSVCSRMEAAEQARNALQVDlaeaekrrEALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRH 578
Cdd:COG1196 503 YEGFLEGVKAALLLAGLRGLAGAVA--------VLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRA 574
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 579 QQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNS 658
Cdd:COG1196 575 TFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGE 654
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 659 VIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREK 738
Cdd:COG1196 655 GGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAER 734
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 2462579258 739 WEKERswHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREE 784
Cdd:COG1196 735 EELLE--ELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1136-1896 |
1.84e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 99.36 E-value: 1.84e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1136 RDVLRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRLRRAELQRME 1215
Cdd:TIGR02168 227 LALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQI 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1216 AQGERELLQAAKENLTAQVEHLQaavvearaqaSAAGILEEDLRTARSALKLKNEEVESERERAQALQEQGELKVAQGKA 1295
Cdd:TIGR02168 307 LRERLANLERQLEELEAQLEELE----------SKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEE 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1296 LQENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSLDLKKRNQEVDLQQ--EQIQELEKCRSVLEHLPMAV 1373
Cdd:TIGR02168 377 LEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAElkELQAELEELEEELEELQEEL 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1374 QEREQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLVTLECLALELEENHHKMECQQKLI 1453
Cdd:TIGR02168 457 ERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYE 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1454 KELEGQRETQRVALTHLTLDLEERSQELQAQSsqihdlESHSTVLARELQERDQEVKSQREQIEELQRQKEHLTQDLERR 1533
Cdd:TIGR02168 537 AAIEAALGGRLQAVVVENLNAAKKAIAFLKQN------ELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKF 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1534 DQELMLqkeriqVLED--QRTRQTKILEEDLEQIKlSLRERGRELTTQRQLMQERAEEGKGPSKAQRGSLEHMKLIlRDK 1611
Cdd:TIGR02168 611 DPKLRK------ALSYllGGVLVVDDLDNALELAK-KLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILERRREI-EEL 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1612 EKEVECQQEHIHELQELKDQLEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQEAREQGELKEQSLQSQLDEAQRALAQ 1691
Cdd:TIGR02168 683 EEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAE 762
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1692 R---DQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKERHGELQDHKEQARRLEEELAVEGRRVQALEEVLGD 1768
Cdd:TIGR02168 763 IeelEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLED 842
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1769 LRAESREQEKALLALQQQ---CAEQAQEHEVETRALQDSWLQAQAVLKERDQELEALRAESQSSRHQEEAARARAEALQE 1845
Cdd:TIGR02168 843 LEEQIEELSEDIESLAAEieeLEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELRE 922
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579258 1846 ALGKAHAALQGKEQHLLEQAELSRSL--------EASTATLQASLDACQAHSRQLEEAL 1896
Cdd:TIGR02168 923 KLAQLELRLEGLEVRIDNLQERLSEEysltleeaEALENKIEDDEEEARRRLKRLENKI 981
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1466-2032 |
7.46e-20 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 97.31 E-value: 7.46e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1466 ALTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQERDQEVKSQREQIEELQRQKEHLTQDLERRDQELMLQKERIQ 1545
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRR 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1546 VLEDQRTRQTKILEEDLEQIKLSLRERGRELTTQRQLMQERAEEGKGPSKAQRGSLEHMKLILRDKEKEVECQQEHIHEL 1625
Cdd:COG1196 313 ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1626 QELKdQLEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQEAREQGELKEQSLQSQLDEAQRALAQRDQELEALQQEQQQ 1705
Cdd:COG1196 393 RAAA-ELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1706 AQGQEERVKEKADALQGALEQAHMTLKERhgELQDHKEQARRLEEELAVEGRRVQALEEVLGDLRAESREQEKALLALQQ 1785
Cdd:COG1196 472 AALLEAALAELLEELAEAAARLLLLLEAE--ADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQ 549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1786 QCAEQAQehevetralqdswlQAQAVLKERDQELEALRAESQSSRHQEEAARARAEALQEALGKAHAALQGKEQHLLEQA 1865
Cdd:COG1196 550 NIVVEDD--------------EVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARY 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1866 ELSRSLEASTATLQASLDACQAHSRQLEEALRIQEGEIQDQDLRYQEDV-QQLQQALAQRDEELRHQQEREQLLEKSLAQ 1944
Cdd:COG1196 616 YVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGgSRRELLAALLEAEAELEELAERLAEEELEL 695
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1945 RVQENMIQEKQNLGQEREEEEIRGLHQSVRELQLTLAQKEQEILELRETQQRNNLEALPHSHKTSPMEEQSLKLDslepR 2024
Cdd:COG1196 696 EEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELE----R 771
|
....*...
gi 2462579258 2025 LQRELERL 2032
Cdd:COG1196 772 LEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
258-828 |
5.42e-19 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 94.62 E-value: 5.42e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 258 YQDADKALTLVRSVLTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLagqtvdlQGEVDS 337
Cdd:COG1196 234 LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARL-------EQDIAR 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 338 LSKERELLQKAREELRQQLEVLEQEAwrlrrvnVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLS 417
Cdd:COG1196 307 LEERRRELEERLEELEEELAELEEEL-------EELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEE 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 418 ELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLL 497
Cdd:COG1196 380 ELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEE 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 498 QLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALweknthLEAQLQKAEEAGAELQADLRDIQeekEEIQKKLSESR 577
Cdd:COG1196 460 ALLELLAELLEEAALLEAALAELLEELAEAAARLLLL------LEAEADYEGFLEGVKAALLLAGL---RGLAGAVAVLI 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 578 HQQEAATTQLEQLHQEAkRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQN 657
Cdd:COG1196 531 GVEAAYEAALEAALAAA-LQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLR 609
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 658 SVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLRE 737
Cdd:COG1196 610 EADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLA 689
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 738 KWEKERSwHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKE 817
Cdd:COG1196 690 EEELELE-EALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERE 768
|
570
....*....|.
gi 2462579258 818 LADASQQLERL 828
Cdd:COG1196 769 LERLEREIEAL 779
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
333-991 |
1.20e-18 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 94.05 E-value: 1.20e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 333 GEVDSLSKERELLQKArEELRQQLEVLEQEAWRlrrvnvelqlQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQ 412
Cdd:PTZ00121 1109 GKAEEARKAEEAKKKA-EDARKAEEARKAEDAR----------KAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKK 1177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 413 SESLSELITLREALESSHLEgELLRQEQtevtAALARAEQSIAELSSSENTLKTEvADLRAAAVKLSAlNEALALDKVGL 492
Cdd:PTZ00121 1178 AEAARKAEEVRKAEELRKAE-DARKAEA----ARKAEEERKAEEARKAEDAKKAE-AVKKAEEAKKDA-EEAKKAEEERN 1250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 493 NQQLLQLEEENQSVCSRMEA---AEQARNALQVDLAEAEKRREAL--WEKNTHLEAQLQKAEEA--GAELQADLRDIQEE 565
Cdd:PTZ00121 1251 NEEIRKFEEARMAHFARRQAaikAEEARKADELKKAEEKKKADEAkkAEEKKKADEAKKKAEEAkkADEAKKKAEEAKKK 1330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 566 KEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEV-----LARAVQEKEALVREKAALEVR----LQAVERDRQDLAEQL 636
Cdd:PTZ00121 1331 ADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKaeaaeKKKEEAKKKADAAKKKAEEKKkadeAKKKAEEDKKKADEL 1410
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 637 QGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQI--QTVTQAKEVIQGEVRCLKLE----LDTERSQAEQERDA----- 705
Cdd:PTZ00121 1411 KKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKadEAKKKAEEAKKAEEAKKKAEeakkADEAKKKAEEAKKAdeakk 1490
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 706 -------AARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSwhqQELAKALESLEREKMELEMRLKEQQTEMEAI 778
Cdd:PTZ00121 1491 kaeeakkKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKA---DEAKKAEEKKKADELKKAEELKKAEEKKKAE 1567
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 779 QAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELAdASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELK 858
Cdd:PTZ00121 1568 EAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMK-AEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEK 1646
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 859 EAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLK----------SQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELE 928
Cdd:PTZ00121 1647 KKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKkaeedekkaaEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEE 1726
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462579258 929 REKASLTLSLMEKEQRLLVLQEAdSIRQQELSALRQDMQEAQGEQKELSAQME-LLRQEVKEKE 991
Cdd:PTZ00121 1727 ENKIKAEEAKKEAEEDKKKAEEA-KKDEEEKKKIAHLKKEEEKKAEEIRKEKEaVIEEELDEED 1789
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
730-1577 |
8.73e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 90.89 E-value: 8.73e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 730 KEVNQLREKWEKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAEsalcqmqlETEKERVSLLE 809
Cdd:TIGR02168 210 EKAERYKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLE--------ELRLEVSELEE 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 810 TLLQTQKELADASQQLERLRQDMKVQKLKEQEttgiLQTQLQEAQRELKEAARQH---RDDLAALQEESSSLLQDKMDLQ 886
Cdd:TIGR02168 282 EIEELQKELYALANEISRLEQQKQILRERLAN----LERQLEELEAQLEELESKLdelAEELAELEEKLEELKEELESLE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 887 KQVEDLKSQLVAQDDSQRLVEQEVQEklretqeYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDM 966
Cdd:TIGR02168 358 AELEELEAELEELESRLEELEEQLET-------LRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKL 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 967 QEAqgEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRASlwaqEAKAAQLQLRLRSTESQLEALaae 1046
Cdd:TIGR02168 431 EEA--ELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAA----ERELAQLQARLDSLERLQENL--- 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1047 QQPGNQAQAQAQLASLYSALQQALGSVCESRPELSgggdsapsvwglepdqngarslfkrgpllTALSAEAVASALHKLH 1126
Cdd:TIGR02168 502 EGFSEGVKALLKNQSGLSGILGVLSELISVDEGYE-----------------------------AAIEAALGGRLQAVVV 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1127 QDLwktQQTRDVLRDQVQKLEERLTDTEAeKSQVHTELQDLQRQLSQNQEEkskWEGKQNSLESELMELHETMASLQSRL 1206
Cdd:TIGR02168 553 ENL---NAAKKAIAFLKQNELGRVTFLPL-DSIKGTEIQGNDREILKNIEG---FLGVAKDLVKFDPKLRKALSYLLGGV 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1207 RRAELQRmEAQGERELLQAAKENLTAQVEHLQAAVVEARAQASAAG----------ILEEDLRTARSALKLKNEEVESER 1276
Cdd:TIGR02168 626 LVVDDLD-NALELAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSsilerrreieELEEKIEELEEKIAELEKALAELR 704
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1277 ERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSLDLKKRNQEVDLQQEQI 1356
Cdd:TIGR02168 705 KELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEI 784
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1357 QELEKcrsvlehlpmAVQEREQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLvtlecla 1436
Cdd:TIGR02168 785 EELEA----------QIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQI------- 847
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1437 leleenhhkmECQQKLIKELEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQERDQEVKSQREQI 1516
Cdd:TIGR02168 848 ----------EELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRREL 917
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462579258 1517 EELQRQKEHLTQDLERRDQELMLQKERI----QVLEDQRTRQTKILEEDLEQIKLSLRERGRELT 1577
Cdd:TIGR02168 918 EELREKLAQLELRLEGLEVRIDNLQERLseeySLTLEEAEALENKIEDDEEEARRRLKRLENKIK 982
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
118-828 |
8.95e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 90.89 E-value: 8.95e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 118 REPAQLLLLLAKTQELEKEAHERSQELIQLKSQGDLEKAELQDRVTELSALLTQSQKQNEDYEKMIKALRETVEILETNH 197
Cdd:TIGR02168 239 EELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQL 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 198 TELMEHEASLSRNAQEEKLSLQQVIKDITQVMVEEGDNIAQGSGHENSLELDSSIFsqfdyQDADKALTLVRSVLTRRRQ 277
Cdd:TIGR02168 319 EELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRL-----EELEEQLETLRSKVAQLEL 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 278 AVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLtgERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLE 357
Cdd:TIGR02168 394 QIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEA--ELKELQAELEELEEELEELQEELERLEEALEELREELE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 358 VLEQEAWRLRRVNVELQLQGDSaQGQKEEQQEELHLAVRERERLQEMLMGLEAkqseSLSELITLREALES--------- 428
Cdd:TIGR02168 472 EAEQALDAAERELAQLQARLDS-LERLQENLEGFSEGVKALLKNQSGLSGILG----VLSELISVDEGYEAaieaalggr 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 429 --------------------------------SHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAV 476
Cdd:TIGR02168 547 lqavvvenlnaakkaiaflkqnelgrvtflplDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVL 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 477 KLSALNEALALDK-VGLNQQLLQLEEENQSVCSRM----EAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEA 551
Cdd:TIGR02168 627 VVDDLDNALELAKkLRPGYRIVTLDGDLVRPGGVItggsAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKE 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 552 GAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQD 631
Cdd:TIGR02168 707 LEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEE 786
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 632 LAEQLQGLSSAKELLESSLFEAQQQnsvievtKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLA 711
Cdd:TIGR02168 787 LEAQIEQLKEELKALREALDELRAE-------LTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAA 859
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 712 QAE--QEGKTALEQQKAAHEKEVNQLREKWEKERSwHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQA 789
Cdd:TIGR02168 860 EIEelEELIEELESELEALLNERASLEEALALLRS-ELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRI 938
|
730 740 750 760
....*....|....*....|....*....|....*....|....*.
gi 2462579258 790 E------SALCQMQLETEKERVSLLETLLQ-TQKELADASQQLERL 828
Cdd:TIGR02168 939 DnlqerlSEEYSLTLEEAEALENKIEDDEEeARRRLKRLENKIKEL 984
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
313-1006 |
9.91e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 90.50 E-value: 9.91e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 313 RLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELH 392
Cdd:TIGR02168 233 RLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLA 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 393 LAVRERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLR 472
Cdd:TIGR02168 313 NLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLE 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 473 AAAVKLSALNEALALDKVGLNQQLLQLEEENQSVcsRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAG 552
Cdd:TIGR02168 393 LQIASLNNEIERLEARLERLEDRRERLQQEIEEL--LKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREEL 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 553 AELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEAL-VREK------AALEVRLQAV 625
Cdd:TIGR02168 471 EEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELIsVDEGyeaaieAALGGRLQAV 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 626 ERDRQDLAEQLQG----------------LSSAKELLESSLFEAQQQNSVIEVTK------------------------- 664
Cdd:TIGR02168 551 VVENLNAAKKAIAflkqnelgrvtflpldSIKGTEIQGNDREILKNIEGFLGVAKdlvkfdpklrkalsyllggvlvvdd 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 665 --------GQLEVQIQTVTQAKEVIQG---------EVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAA 727
Cdd:TIGR02168 631 ldnalelaKKLRPGYRIVTLDGDLVRPggvitggsaKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEEL 710
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 728 HEKEVNQLREKWEKERSWHQQElaKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQlETEKERVSL 807
Cdd:TIGR02168 711 EEELEQLRKELEELSRQISALR--KDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELA-EAEAEIEEL 787
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 808 LETLLQTQKELADASQQLERLRQDMkvqklkeqettgilqTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQK 887
Cdd:TIGR02168 788 EAQIEQLKEELKALREALDELRAEL---------------TLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSE 852
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 888 QVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQ 967
Cdd:TIGR02168 853 DIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLE 932
|
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 2462579258 968 EAQGE----QKELSAQMELLRQEVKEKEADFLAQEAQLLEELE 1006
Cdd:TIGR02168 933 GLEVRidnlQERLSEEYSLTLEEAEALENKIEDDEEEARRRLK 975
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
442-1326 |
2.92e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 88.96 E-value: 2.92e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 442 EVTAALARAEQSIAELSSSENTLKTEVAdlraAAVKLSALNEAL-ALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNAL 520
Cdd:TIGR02168 183 RTRENLDRLEDILNELERQLKSLERQAE----KAERYKELKAELrELELALLVLRLEELREELEELQEELKEAEEELEEL 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 521 QVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEV 600
Cdd:TIGR02168 259 TAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEE 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 601 LARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEv 680
Cdd:TIGR02168 339 LAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRE- 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 681 iqgevrclklELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLERE 760
Cdd:TIGR02168 418 ----------RLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQL 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 761 KMELEMRLKEQQTEMEAIQAQREEERTQAESA----LCQMQLETEKERVSLLETLLQ------TQKELADASQQLERLRQ 830
Cdd:TIGR02168 488 QARLDSLERLQENLEGFSEGVKALLKNQSGLSgilgVLSELISVDEGYEAAIEAALGgrlqavVVENLNAAKKAIAFLKQ 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 831 DmKVQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSsllqdkmDLQKQVEDLKSQLVAQDDSqrlveQEV 910
Cdd:TIGR02168 568 N-ELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDP-------KLRKALSYLLGGVLVVDDL-----DNA 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 911 QEKLRETQEYNRI---QKELEREKASLT-------LSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQM 980
Cdd:TIGR02168 635 LELAKKLRPGYRIvtlDGDLVRPGGVITggsaktnSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEEL 714
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 981 ELLRQEVKEKEADFLAQEAQLL-EELEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEALAAEQQPGNQAQAQAQL 1059
Cdd:TIGR02168 715 EQLRKELEELSRQISALRKDLArLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQL 794
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1060 ASLYSALQQALGSVcesRPELSgggdsapsvwglepdqngarslfkrgplLTALSAEAVASALHKLHQDLWKTQQTRDVL 1139
Cdd:TIGR02168 795 KEELKALREALDEL---RAELT----------------------------LLNEEAANLRERLESLERRIAATERRLEDL 843
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1140 RDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRLRRAELQRMEAQGE 1219
Cdd:TIGR02168 844 EEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREK 923
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1220 RELLQAAKENLTAQVEHLQAAVVEaRAQASAAGILEEDLRTARSALKLKnEEVESERERAQALQEQGELKVAQGKALQEN 1299
Cdd:TIGR02168 924 LAQLELRLEGLEVRIDNLQERLSE-EYSLTLEEAEALENKIEDDEEEAR-RRLKRLENKIKELGPVNLAAIEEYEELKER 1001
|
890 900
....*....|....*....|....*..
gi 2462579258 1300 LALLTQTLAEREEEVETLRGQIQELEK 1326
Cdd:TIGR02168 1002 YDFLTAQKEDLTEAKETLEEAIEEIDR 1028
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
345-1043 |
3.61e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 88.58 E-value: 3.61e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 345 LQKAREELRQQLEVLEQE---AWRLRRVNVEL-QLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELI 420
Cdd:TIGR02168 191 LEDILNELERQLKSLERQaekAERYKELKAELrELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLE 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 421 TLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLE 500
Cdd:TIGR02168 271 ELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELK 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 501 EENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSEsrHQQ 580
Cdd:TIGR02168 351 EELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEE--LLK 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 581 EAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQ-QNSV 659
Cdd:TIGR02168 429 KLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGfSEGV 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 660 IEVTKGQLE--------------------------------VQIQTVTQAKEVIQ-----GEVRCLKLELDTERSQAEQE 702
Cdd:TIGR02168 509 KALLKNQSGlsgilgvlselisvdegyeaaieaalggrlqaVVVENLNAAKKAIAflkqnELGRVTFLPLDSIKGTEIQG 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 703 RDAAARQLAQAEQ----------------------------EGKTALEQQKAAHEK----------------------EV 732
Cdd:TIGR02168 589 NDREILKNIEGFLgvakdlvkfdpklrkalsyllggvlvvdDLDNALELAKKLRPGyrivtldgdlvrpggvitggsaKT 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 733 NQLREKWEKERSWHQQELAKALESLEREKMELEMRLKEQQT-EMEAIQAQREEERTQAESALCQMQLETEKERV-SLLET 810
Cdd:TIGR02168 669 NSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEElEEELEQLRKELEELSRQISALRKDLARLEAEVeQLEER 748
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 811 LLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQtQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVE 890
Cdd:TIGR02168 749 IAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIE-ELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLE 827
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 891 DLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQ 970
Cdd:TIGR02168 828 SLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELE 907
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462579258 971 GEQKELSAQMELLRQ---EVKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQ-EAKAAQLQLRLRSTESQLEAL 1043
Cdd:TIGR02168 908 SKRSELRRELEELREklaQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKiEDDEEEARRRLKRLENKIKEL 984
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1277-1849 |
3.79e-17 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 88.46 E-value: 3.79e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1277 ERAQALQE-----QGELKVAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSLDLKKRNQEVDL 1351
Cdd:COG1196 213 ERYRELKEelkelEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYE 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1352 QQEQIQELEKCRSVLEHLPMAVQEREQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLVT 1431
Cdd:COG1196 293 LLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEA 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1432 LECLALELEENhhkmecQQKLIKELEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQERDQEVKS 1511
Cdd:COG1196 373 ELAEAEEELEE------LAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEE 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1512 QREQIEELQRQKEHLTQDLERRDQELMLQKERIQVLEDQRTRQTKILEEDLEQIKlslrERGRELTTQRQLMQERAEEGK 1591
Cdd:COG1196 447 AAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEA----DYEGFLEGVKAALLLAGLRGL 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1592 GPSKAQRGSLEHMKLILRDKEKEVECQQEHIHELQELKDQLEQQLQGLHRKVGETSLLLSQREQ--EIVVLQQQLQEARE 1669
Cdd:COG1196 523 AGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAalAAALARGAIGAAVD 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1670 QGELKEQSLQSQLDEAQRALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKERhGELQDHKEQARRLE 1749
Cdd:COG1196 603 LVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSR-RELLAALLEAEAEL 681
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1750 EELAVEGRRVQALEEVLGDLRAESREQEKALLALQQQCAEQAQEHEVETRALQDSWLQAQAVLKERDQELEALRAESQSS 1829
Cdd:COG1196 682 EELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPD 761
|
570 580
....*....|....*....|
gi 2462579258 1830 RHQEEAARARAEALQEALGK 1849
Cdd:COG1196 762 LEELERELERLEREIEALGP 781
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1513-2101 |
6.63e-17 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 87.68 E-value: 6.63e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1513 REQIEELQRQKEH------LTQDLERRDQELMLQK-ERIQVLEDQRTRQTKILEEDLEQIKLSLRERGRELTTQRQLMQE 1585
Cdd:COG1196 199 ERQLEPLERQAEKaeryreLKEELKELEAELLLLKlRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEE 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1586 RAEEgkgpSKAQRGSLEHMKLILRDKEKEVECQQEHIHELQELKDQLEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQ 1665
Cdd:COG1196 279 LELE----LEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELE 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1666 EAREQGELKEQSLQSQLDEAQRALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKERHGELQDHKEQA 1745
Cdd:COG1196 355 EAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELE 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1746 RRLEEELAVEGRRVQALEEVLGDLRAESREQEKALLALQQQCAEQAQEHEVETRALQDSWLQAQAvlkerdQELEALRAE 1825
Cdd:COG1196 435 EEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEA------EADYEGFLE 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1826 SQSSRHQEEAARARAEALQEALGKAHAALQGKEQHLLEQAELSRSLEASTATLQASLDACQAHSRQLEEALRIQEGE--I 1903
Cdd:COG1196 509 GVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARaaL 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1904 QDQDLRYQEDVQQLQQALAQRDEELRHQQEREQLLEKSLAQRVQENMIQEKQNLGQEREEEEIRGLHQSVRELQLTLAQK 1983
Cdd:COG1196 589 AAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRR 668
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1984 EQEILELRETQQRNNLEALPHSHKTSPMEEQSLKLDSLEPRLQRELERLQAALRQTEAREIEWREKAQDLALSLAQTKAS 2063
Cdd:COG1196 669 ELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELL 748
|
570 580 590
....*....|....*....|....*....|....*...
gi 2462579258 2064 VSSLQEvamflQASVLERDSEQQRLQDELELTRRALEK 2101
Cdd:COG1196 749 EEEALE-----ELPEPPDLEELERELERLEREIEALGP 781
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1297-2069 |
2.96e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 85.88 E-value: 2.96e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1297 QENLALLTQTLAEREEEVETLRGQ----IQELEKQREMQKAALELLSLDLKKRNQEVDLQQEQIQELEkcrSVLEHLPMA 1372
Cdd:TIGR02168 185 RENLDRLEDILNELERQLKSLERQaekaERYKELKAELRELELALLVLRLEELREELEELQEELKEAE---EELEELTAE 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1373 VQEREQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLVTLECLALELEEnhhKMECQQKL 1452
Cdd:TIGR02168 262 LQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELES---KLDELAEE 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1453 IKELEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQERDQEVKSQREQIEELQRQKEHLTQDLER 1532
Cdd:TIGR02168 339 LAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRER 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1533 RDQELMLQKERIQVLEDQRTR----QTKILEEDLEQIKLSLRERGRELTTQRQLMQERAEEGKGPSKAQRGSLEHMKLIL 1608
Cdd:TIGR02168 419 LQQEIEELLKKLEEAELKELQaeleELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQ 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1609 RDKEKEVECQQEHIHELQELKDQLEQQLQGLHRKVG---ETSLLLSQREQEIVV----LQQQLQEAREQGELKEQSLQSQ 1681
Cdd:TIGR02168 499 ENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGyeaAIEAALGGRLQAVVVenlnAAKKAIAFLKQNELGRVTFLPL 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1682 LDEAQRALAQRDQELEALQQEQQQAQGQEERVKEK--------------ADALQGALEQAH-MTLKERHGELQDHKEQAR 1746
Cdd:TIGR02168 579 DSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKlrkalsyllggvlvVDDLDNALELAKkLRPGYRIVTLDGDLVRPG 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1747 ------RLEEELAVEGRRVQ--ALEEVLGDLRAESREQEKALLALQQQCAEQaqehEVETRALQDSWLQAQAVLKERDQE 1818
Cdd:TIGR02168 659 gvitggSAKTNSSILERRREieELEEKIEELEEKIAELEKALAELRKELEEL----EEELEQLRKELEELSRQISALRKD 734
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1819 LEALRAESQSSRHQEEAARARAEALQEALGKAHAALQGKEQHLLEQAELSRSLEASTATLQASLDacqahsrQLEEALRI 1898
Cdd:TIGR02168 735 LARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELK-------ALREALDE 807
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1899 QEGEIQDQDLRYQEDVQQLQQALAQRDEELRHQQEREQLLEKSLAQRVQENMIQEKQNLGQEREEEEIRGLHQSVRELQL 1978
Cdd:TIGR02168 808 LRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEE 887
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1979 TLAQKEQEILELRETQQRNNLEALP----HSHKTSPMEEQSLKLDSLEPRLQRELERLqAALRQTEAREIEwrEKAQDLA 2054
Cdd:TIGR02168 888 ALALLRSELEELSEELRELESKRSElrreLEELREKLAQLELRLEGLEVRIDNLQERL-SEEYSLTLEEAE--ALENKIE 964
|
810
....*....|....*
gi 2462579258 2055 LSLAQTKASVSSLQE 2069
Cdd:TIGR02168 965 DDEEEARRRLKRLEN 979
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1149-1691 |
3.07e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 85.37 E-value: 3.07e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1149 RLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRLRRAELQRMEAQG----ERELLQ 1224
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQdiarLEERRR 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1225 AAKENLTAQVEHLQAAVVEARAQASAAGILEEDLRTARSALKLKNEEVESERERAQALQEQGELKVAQGKALQENLALLT 1304
Cdd:COG1196 313 ELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1305 QTLAEREEEVETLRGQIQELEKQREMQKAALELLSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQEREQKLTVQR 1384
Cdd:COG1196 393 RAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEA 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1385 EQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLVTLECLALELEENHHKMECQQKLIKELEGQRETQR 1464
Cdd:COG1196 473 ALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIV 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1465 VALTHLTLDLEERSQELQA------QSSQIHDLESHSTVLARELQERDQEVKSQREQIEELQRQKEHLTQDLERRDQELM 1538
Cdd:COG1196 553 VEDDEVAAAAIEYLKAAKAgratflPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARL 632
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1539 LQKERIQVLEDQRTRQTKILEEDLEQIKLSLRERGRELTTQRQLMQERAEEgkgpskaQRGSLEHMKLILRDKEKEVECQ 1618
Cdd:COG1196 633 EAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEE-------LAERLAEEELELEEALLAEEEE 705
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462579258 1619 QEHIHELQELKDQLEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQEAREQGELKEQSLQSQLDEAQRALAQ 1691
Cdd:COG1196 706 ERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
122-647 |
4.03e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 84.99 E-value: 4.03e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 122 QLLLLLAKTQELEKEAHERSQELIQLKSQGDLEKAELQDRVTELSALLTQSQKQNEDYEKMIKALRETVEILETNHTELm 201
Cdd:COG1196 226 EAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDI- 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 202 EHEASLSRNAQEEKLSLQQVIKDITQVMVEEGDNIAQGSGHENSLELDSSIFSQFDYQDADKALTLVRSVLTRRRQAVQD 281
Cdd:COG1196 305 ARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEEL 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 282 LRQQLAGCQEAVNLLQQQHDQwEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQ 361
Cdd:COG1196 385 AEELLEALRAAAELAAQLEEL-EEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLE 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 362 EAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLR-------EALESSHLEGE 434
Cdd:COG1196 464 LLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAvavligvEAAYEAALEAA 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 435 LLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENqSVCSRMEAAE 514
Cdd:COG1196 544 LAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREAD-ARYYVLGDTL 622
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 515 QARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEA 594
Cdd:COG1196 623 LGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAE 702
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 2462579258 595 KRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLE 647
Cdd:COG1196 703 EEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEE 755
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
691-1535 |
9.36e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 83.96 E-value: 9.36e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 691 ELDTERSQAEQERDAAARQLAQAE---QEGKTALEQQKAAHEK--EVNQLREKWEKERSWhqqELAKALESLEREKMELE 765
Cdd:TIGR02169 167 EFDRKKEKALEELEEVEENIERLDliiDEKRQQLERLRREREKaeRYQALLKEKREYEGY---ELLKEKEALERQKEAIE 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 766 MRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQEttgi 845
Cdd:TIGR02169 244 RQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELED---- 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 846 LQTQLQEAQRELKEAARQHRDDLAALQEEsssllqdkmdlQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQK 925
Cdd:TIGR02169 320 AEERLAKLEAEIDKLLAEIEELEREIEEE-----------RKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELK 388
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 926 ELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEadflaqeaQLLEEL 1005
Cdd:TIGR02169 389 DYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQE--------WKLEQL 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1006 EASHITEQQlraSLWAQEAKAAQLQLRLRSTESQLEALAAEQQPGNQAQAQAQLAS--LYSALQQALGSVCE-------- 1075
Cdd:TIGR02169 461 AADLSKYEQ---ELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEevLKASIQGVHGTVAQlgsvgery 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1076 -SRPELSGGG----------DSAPSVWGLEPDQNGARSLF--------KRGPLLTALSAEAVASALHKLHQDLWKTQQTR 1136
Cdd:TIGR02169 538 aTAIEVAAGNrlnnvvveddAVAKEAIELLKRRKAGRATFlplnkmrdERRDLSILSEDGVIGFAVDLVEFDPKYEPAFK 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1137 DVLRDQ--VQKLEE-RLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRLRRAELQR 1213
Cdd:TIGR02169 618 YVFGDTlvVEDIEAaRRLMGKYRMVTLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSEL 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1214 MEAQGERELLQAAKENLTAQVEHLQAAVVEARAQASAAGILEEDLRTARSALKLKNEEVESERERAQALQEQGELKVAQg 1293
Cdd:TIGR02169 698 RRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHK- 776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1294 kaLQENLALLTQTLAerEEEVETLRGQIQELEKQREMQKAALELLSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAV 1373
Cdd:TIGR02169 777 --LEEALNDLEARLS--HSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSI 852
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1374 QEREQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQL-VTLECLALELEENHHKMECQQKL 1452
Cdd:TIGR02169 853 EKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELeAQIEKKRKRLSELKAKLEALEEE 932
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1453 IKELEgQRETQRVALTHLTLDLEERSQELQAQSSQIHDLEShstVLARELQERDQEVKSQREQIEELQRQKEHLTQDLER 1532
Cdd:TIGR02169 933 LSEIE-DPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEP---VNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILER 1008
|
...
gi 2462579258 1533 RDQ 1535
Cdd:TIGR02169 1009 IEE 1011
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
422-1230 |
1.32e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 83.57 E-value: 1.32e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 422 LREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEE 501
Cdd:TIGR02168 237 LREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLER 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 502 ENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQE 581
Cdd:TIGR02168 317 QLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIA 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 582 AATTQLEQLHQEAKRQEEVLARAVQEKEALvrEKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIE 661
Cdd:TIGR02168 397 SLNNEIERLEARLERLEDRRERLQQEIEEL--LKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAE 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 662 VTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAAR-----QLAQAEQEGKTALEqqkAAHEKEVNQLR 736
Cdd:TIGR02168 475 QALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGIlgvlsELISVDEGYEAAIE---AALGGRLQAVV 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 737 EKwekerswHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESAL--CQMQLETEKERVSLLETLLQT 814
Cdd:TIGR02168 552 VE-------NLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLgvAKDLVKFDPKLRKALSYLLGG 624
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 815 ---QKELADASQQLERLRQDMKVQKLK-EQETTGILQTQlqeaQRELKEAARQHRddlaalQEESSSLLQDKMDLQKQVE 890
Cdd:TIGR02168 625 vlvVDDLDNALELAKKLRPGYRIVTLDgDLVRPGGVITG----GSAKTNSSILER------RREIEELEEKIEELEEKIA 694
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 891 DLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQ 970
Cdd:TIGR02168 695 ELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAE 774
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 971 GEQKELSAQMELLRQEVKEKEADFLAQEAQlLEELEASHiteQQLRASLWAQEAKAAQLQLRLRSTESQLEALAAEQQPG 1050
Cdd:TIGR02168 775 EELAEAEAEIEELEAQIEQLKEELKALREA-LDELRAEL---TLLNEEAANLRERLESLERRIAATERRLEDLEEQIEEL 850
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1051 NQAQaqaqlaslySALQQALGSVCESRPELSgggdsapsvwglepdqngarslfkrgplltalsaeavaSALHKLHQDLW 1130
Cdd:TIGR02168 851 SEDI---------ESLAAEIEELEELIEELE--------------------------------------SELEALLNERA 883
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1131 KTQQTRDVLRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRL-RRA 1209
Cdd:TIGR02168 884 SLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALeNKI 963
|
810 820
....*....|....*....|.
gi 2462579258 1210 ELQRMEAQGERELLQAAKENL 1230
Cdd:TIGR02168 964 EDDEEEARRRLKRLENKIKEL 984
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
586-1240 |
5.11e-15 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 81.52 E-value: 5.11e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 586 QLEQLHQEAKRQEEvlARAVQEKEALVREKAALevrlqaveRDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKG 665
Cdd:COG1196 201 QLEPLERQAEKAER--YRELKEELKELEAELLL--------LKLRELEAELEELEAELEELEAELEELEAELAELEAELE 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 666 QLEVQIQTVTQAKEVIQGEVRclklELDTERSQAEQERDAAARQLAQAEQEgktaleqqkaahEKEVNQLREKWEKERSW 745
Cdd:COG1196 271 ELRLELEELELELEEAQAEEY----ELLAELARLEQDIARLEERRRELEER------------LEELEEELAELEEELEE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 746 HQQELAKALESLEREKMELEMRLKEQQtemEAIQAQREEERTQAEsalcqmQLETEKERVSLLETLLQTQKELADASQQL 825
Cdd:COG1196 335 LEEELEELEEELEEAEEELEEAEAELA---EAEEALLEAEAELAE------AEEELEELAEELLEALRAAAELAAQLEEL 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 826 ERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRL 905
Cdd:COG1196 406 EEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEE 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 906 VEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQEL--SALRQDMQEAQGEQKELSAQMELL 983
Cdd:COG1196 486 LAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAAleAALAAALQNIVVEDDEVAAAAIEY 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 984 RQEVKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEALAAEQQPGNQAQAQAQLASLY 1063
Cdd:COG1196 566 LKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGR 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1064 SALQQALGSVCESRPELSGGGdsapsvwglepdQNGARSLFKRGPLLTALSAEAVASALHKLHQDLWKTQQTRDVLRDQV 1143
Cdd:COG1196 646 LREVTLEGEGGSAGGSLTGGS------------RRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAE 713
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1144 QKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEkskwegkQNSLESELMELHETMASLQSRLRRAELQR-------MEA 1216
Cdd:COG1196 714 EERLEEELEEEALEEQLEAEREELLEELLEEEEL-------LEEEALEELPEPPDLEELERELERLEREIealgpvnLLA 786
|
650 660
....*....|....*....|....
gi 2462579258 1217 QGERELLQAAKENLTAQVEHLQAA 1240
Cdd:COG1196 787 IEEYEELEERYDFLSEQREDLEEA 810
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1601-2160 |
1.08e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 80.37 E-value: 1.08e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1601 LEHMKLILRDKEKEVECQQEHIHELQELKDQLEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQEAREQGELKEQSLQS 1680
Cdd:COG1196 227 AELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIAR 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1681 QLDEAQRALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKERHGELQDHKEQARRLEEELAVEGRRVQ 1760
Cdd:COG1196 307 LEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAE 386
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1761 ALEEVLGDlRAESREQEKALLALQQQCAEQAQEHEVETRALQDSWLQAQAVLKERDQELEALRAESQSSRHQEEAARARA 1840
Cdd:COG1196 387 ELLEALRA-AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELL 465
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1841 EALQEALGKAHAALQGKEQHLLEQAELSRSLEASTATLQASLDACQAHSRQLEEALRIQEGEIQDQDLRYQEDVQQLQQA 1920
Cdd:COG1196 466 AELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALA 545
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1921 LAQRD---EELRHQQEREQLLEKSLAQRVQENMIQEKQNLGQEREEEEIRGLHQSVRELQLTLAQKEQEILELRETQQRN 1997
Cdd:COG1196 546 AALQNivvEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGR 625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1998 NLEALphshktsPMEEQSLKLDSLEPRLQRELERLQAALRQTEAREIEWREKAQDLALSLAQTKASVSSLQEVAMFLQAS 2077
Cdd:COG1196 626 TLVAA-------RLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEA 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 2078 VLERDSEQQRLQDELELTRRALEKERLHSPGATSTAELGSRgEQGVQLGEVSGVEAEPSPDGMEKQSWRQRLEHLQQAVA 2157
Cdd:COG1196 699 LLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLE-ELLEEEELLEEEALEELPEPPDLEELERELERLEREIE 777
|
...
gi 2462579258 2158 RLE 2160
Cdd:COG1196 778 ALG 780
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1623-2190 |
4.24e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 78.44 E-value: 4.24e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1623 HELQELKDQLEQQLQGLHRKVGETSL-LLSQREQEIVVLQQQLQEAREQGELKEQSLQSQLDEAQRALAQRDQELEALQQ 1701
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELeELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1702 EQQQAQGQEERVKEKADALQGALEQAHMTLKERHGELQDHKEQARRLEEELAVEGRRVQALEEVLGDLRAESREQEKALL 1781
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELA 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1782 ALQQQCAEQAQEHEVETRALQDSwLQAQAVLKERDQELEALRAESQSSRHQEEAARARAEALQEALGKAHAALQGKEQHL 1861
Cdd:COG1196 376 EAEEELEELAEELLEALRAAAEL-AAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAEL 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1862 LEQAELSRSLEASTATLQASLDACQAHSRQLEEALRIQEGEIQDQDLRYQEDVQQLQQALAQRDEELRHQQEREQLLEKS 1941
Cdd:COG1196 455 EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEA 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1942 LAQRVQENmiqEKQNLGQEREEEEIRGLHQSVRELQLTLAQKEQEILELRETQQRNNLEALPHSHKTSPMEEQSLKLDSL 2021
Cdd:COG1196 535 AYEAALEA---ALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREA 611
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 2022 EPRLQRELERLQAALRQTEAREIEWREKAQDLALSLAQTKASVSSLQEVAMFLQASVLERDSEQQRLQDELELTRRALEK 2101
Cdd:COG1196 612 DARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEE 691
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 2102 ERLHSPGATSTAELGSRGEQGVQLGEVSGVEAEpspdgMEKQSWRQRLEHLQQAVARLEIDRSRLQRHNVQLRSTLEQVE 2181
Cdd:COG1196 692 ELELEEALLAEEEEERELAEAEEERLEEELEEE-----ALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELE 766
|
....*....
gi 2462579258 2182 RERRKLKRE 2190
Cdd:COG1196 767 RELERLERE 775
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
396-737 |
1.52e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 76.63 E-value: 1.52e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 396 RERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAA 475
Cdd:TIGR02168 677 REIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKEL 756
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 476 VKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAEL 555
Cdd:TIGR02168 757 TELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAAT 836
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 556 QADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAkrqeevlaravqekEALVREKAALEVRLQAVERDRQDLAEQ 635
Cdd:TIGR02168 837 ERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESEL--------------EALLNERASLEEALALLRSELEELSEE 902
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 636 LQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQA----KEVIQGEVRCLKLELDTERSQAEQERDAAARQLA 711
Cdd:TIGR02168 903 LRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERlseeYSLTLEEAEALENKIEDDEEEARRRLKRLENKIK 982
|
330 340 350
....*....|....*....|....*....|....*....
gi 2462579258 712 -------------QAEQEGKTALEQQKAAHEKEVNQLRE 737
Cdd:TIGR02168 983 elgpvnlaaieeyEELKERYDFLTAQKEDLTEAKETLEE 1021
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
334-930 |
1.81e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 76.72 E-value: 1.81e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 334 EVDSLSKERELLQKArEELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHlAVRERERLQEMLMGLEAKQS 413
Cdd:PTZ00121 1303 KADEAKKKAEEAKKA-DEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAE-AAEEKAEAAEKKKEEAKKKA 1380
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 414 ESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSalnealaldkvgln 493
Cdd:PTZ00121 1381 DAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKA-------------- 1446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 494 QQLLQLEEENQSVCSRMEAAEQARNALQVDlAEAEKRREALWEKNTHLEAQlQKAEEAGAELQADLRDIQEEKEEIQKKL 573
Cdd:PTZ00121 1447 DEAKKKAEEAKKAEEAKKKAEEAKKADEAK-KKAEEAKKADEAKKKAEEAK-KKADEAKKAAEAKKKADEAKKAEEAKKA 1524
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 574 SESRHQQEAATTQLEQLHQEAKRQEEVLA----RAVQEKEALVREKAALEVRLQAVERdrqdlAEQLQGLSSAKELLESS 649
Cdd:PTZ00121 1525 DEAKKAEEAKKADEAKKAEEKKKADELKKaeelKKAEEKKKAEEAKKAEEDKNMALRK-----AEEAKKAEEARIEEVMK 1599
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 650 LFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHE 729
Cdd:PTZ00121 1600 LYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEE 1679
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 730 KEVNQLREKWEKERSWHQQELAKALESLEREKME-----LEMRLKEQQTEMEAIQAQR--EEERTQAESA---------L 793
Cdd:PTZ00121 1680 AKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEekkkaEELKKAEEENKIKAEEAKKeaEEDKKKAEEAkkdeeekkkI 1759
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 794 CQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETT----GILQTQLQEAQRELKEAARQHRDDLA 869
Cdd:PTZ00121 1760 AHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANiiegGKEGNLVINDSKEMEDSAIKEVADSK 1839
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462579258 870 ALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQK-ELERE 930
Cdd:PTZ00121 1840 NMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEKIDKdDIERE 1901
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
305-1016 |
6.30e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 74.72 E-value: 6.30e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 305 EEGKALRQRLQK-----LTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLE----VLEQEAWRLRRVNVELQL 375
Cdd:TIGR02169 211 ERYQALLKEKREyegyeLLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEeieqLLEELNKKIKDLGEEEQL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 376 QGDSAQGQKEEQQEELHLAVRERERLQEmlmGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIA 455
Cdd:TIGR02169 291 RVKEKIGELEAEIASLERSIAEKERELE---DAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELE 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 456 ELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALW 535
Cdd:TIGR02169 368 DLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKA 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 536 EKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEA---KRQEEVLARAVQEKEALV 612
Cdd:TIGR02169 448 LEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVrggRAVEEVLKASIQGVHGTV 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 613 RE--------KAALEV----RLQAVERDRQDLAEQLQGLSSAKEL-----LESSLFEAQQQNSVIEVTKGQLEVQIQTVT 675
Cdd:TIGR02169 528 AQlgsvgeryATAIEVaagnRLNNVVVEDDAVAKEAIELLKRRKAgratfLPLNKMRDERRDLSILSEDGVIGFAVDLVE 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 676 QAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAE---QEGKTALEQQKAAHEKEVNQLREKWEKERSWHQ-QELA 751
Cdd:TIGR02169 608 FDPKYEPAFKYVFGDTLVVEDIEAARRLMGKYRMVTLEGelfEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERlEGLK 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 752 KALESLEREKMELEMRLKEQQTEMEAiqAQREEERTQAESALCQMQLETEKERVSLLETLLQ-TQKELADASQQLERLR- 829
Cdd:TIGR02169 688 RELSSLQSELRRIENRLDELSQELSD--ASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSsLEQEIENVKSELKELEa 765
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 830 --QDMKVQKLKEQETTG-----ILQTQLQEAQRELKEAARQHRDDLAALQE---ESSSLLQDKMDLQKQVEDLKSQLVAQ 899
Cdd:TIGR02169 766 riEELEEDLHKLEEALNdlearLSHSRIPEIQAELSKLEEEVSRIEARLREieqKLNRLTLEKEYLEKEIQELQEQRIDL 845
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 900 DDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQ 979
Cdd:TIGR02169 846 KEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAK 925
|
730 740 750
....*....|....*....|....*....|....*..
gi 2462579258 980 MELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLR 1016
Cdd:TIGR02169 926 LEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQR 962
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
799-1589 |
8.64e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 74.32 E-value: 8.64e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 799 ETEKERVSLLETLLQTQKELADASQQLERL-RQDMKVQKLKEqettgiLQTQLQEAQREL-KEAARQHRDDLAALQEESS 876
Cdd:TIGR02168 176 ETERKLERTRENLDRLEDILNELERQLKSLeRQAEKAERYKE------LKAELRELELALlVLRLEELREELEELQEELK 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 877 SLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQ 956
Cdd:TIGR02168 250 EAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELE 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 957 QELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLlEELEASHITEQQLRASLwaqEAKAAQLQLRLRST 1036
Cdd:TIGR02168 330 SKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRL-EELEEQLETLRSKVAQL---ELQIASLNNEIERL 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1037 ESQLEALAAEQQPGNQAQAQAQLASLYSALQQALGSVCESRPELSGggdsapsvwglepdqngarslfkrgpllTALSAE 1116
Cdd:TIGR02168 406 EARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEE----------------------------LQEELE 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1117 AVASALHKLHQDLWKTQQTRDVLRDQVQKLEERLTdteaeksqvhtELQDLQRQLSQNQEEKSKWEGKQNSLESELMELh 1196
Cdd:TIGR02168 458 RLEEALEELREELEEAEQALDAAERELAQLQARLD-----------SLERLQENLEGFSEGVKALLKNQSGLSGILGVL- 525
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1197 etmaslqsrlrrAELQRMEAQGERELLQAAKENLTA-QVEHLQAAVVEARAQASA----AGILEEDLRTARSALKLKNEE 1271
Cdd:TIGR02168 526 ------------SELISVDEGYEAAIEAALGGRLQAvVVENLNAAKKAIAFLKQNelgrVTFLPLDSIKGTEIQGNDREI 593
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1272 VESERERAQALQEQGELKVAQGKALQENLA--LLTQTLAE---------REEEVETLRGQIQE----LEKQREMQKAALE 1336
Cdd:TIGR02168 594 LKNIEGFLGVAKDLVKFDPKLRKALSYLLGgvLVVDDLDNalelakklrPGYRIVTLDGDLVRpggvITGGSAKTNSSIL 673
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1337 LLSLDLKKRNQEVDLQQEQIQELEKCRSVLEHlpmAVQEREQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIE 1416
Cdd:TIGR02168 674 ERRREIEELEEKIEELEEKIAELEKALAELRK---ELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIA 750
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1417 SQRGQVQDLKKQLVTLECLALELEENHHKMEcqqKLIKELEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLESHST 1496
Cdd:TIGR02168 751 QLSKELTELEAEIEELEERLEEAEEELAEAE---AEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLE 827
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1497 VLARELQERDQEVKSQREQIEELQRQKEHLTQDLERRDQELMLQKERIQVLEDQRT---RQTKILEEDLEQIKLSLRERG 1573
Cdd:TIGR02168 828 SLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERAsleEALALLRSELEELSEELRELE 907
|
810
....*....|....*.
gi 2462579258 1574 RELTTQRQLMQERAEE 1589
Cdd:TIGR02168 908 SKRSELRRELEELREK 923
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
513-1367 |
9.39e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 74.41 E-value: 9.39e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 513 AEQARNALQVDLAEAEKRREALweknthleaqlQKAEEAgaelqadlRDIQE-EKEEIQKKLSESRHQQEAATTQLEQLH 591
Cdd:PTZ00121 1100 AEEAKKTETGKAEEARKAEEAK-----------KKAEDA--------RKAEEaRKAEDARKAEEARKAEDAKRVEIARKA 1160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 592 QEAKRQEEvlARAVQEKEALVREKAALEVRlqaverdrqdLAEQLQGLSSAKELLESSLFEAQQQnsVIEVTKGQLEVQI 671
Cdd:PTZ00121 1161 EDARKAEE--ARKAEDAKKAEAARKAEEVR----------KAEELRKAEDARKAEAARKAEEERK--AEEARKAEDAKKA 1226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 672 QTVTQAKEVIQGEVRCLKLE---LDTERSQAEQERDA--AARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSwh 746
Cdd:PTZ00121 1227 EAVKKAEEAKKDAEEAKKAEeerNNEEIRKFEEARMAhfARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKA-- 1304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 747 qQELAKALESlEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSlletllQTQKELADASQQLE 826
Cdd:PTZ00121 1305 -DEAKKKAEE-AKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAA------EEKAEAAEKKKEEA 1376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 827 RLRQDMKVQKLKEQETTGILQTQLQEAQREL-----KEAARQHRDDLAALQEE--SSSLLQDKMDLQKQVEDLKSQLvaq 899
Cdd:PTZ00121 1377 KKKADAAKKKAEEKKKADEAKKKAEEDKKKAdelkkAAAAKKKADEAKKKAEEkkKADEAKKKAEEAKKADEAKKKA--- 1453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 900 ddSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRllvlQEADSIRQQELSALRQDmqeaQGEQKELSAQ 979
Cdd:PTZ00121 1454 --EEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAK----KKADEAKKAAEAKKKAD----EAKKAEEAKK 1523
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 980 MELLRQEVKEKEADFL--AQEAQLLEELEAShiteQQLRAslwAQEAKAAQlQLRLRSTESQLEALAAEQQPGNQAQAQA 1057
Cdd:PTZ00121 1524 ADEAKKAEEAKKADEAkkAEEKKKADELKKA----EELKK---AEEKKKAE-EAKKAEEDKNMALRKAEEAKKAEEARIE 1595
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1058 QLASLYSALQQALGSVCESRPELSGGGDSAPSvwglepdqngARSLFKRGPLLTALSAEAVASAlhklhQDLWKTQQTRD 1137
Cdd:PTZ00121 1596 EVMKLYEEEKKMKAEEAKKAEEAKIKAEELKK----------AEEEKKKVEQLKKKEAEEKKKA-----EELKKAEEENK 1660
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1138 VLRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRLRRAELQRMEAQ 1217
Cdd:PTZ00121 1661 IKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAE 1740
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1218 GERellQAAKENLTAQVEHLQAAVVEARAQASAAGILEEDLRTARSALKLKNEEVESERERAQALQEQGELKVAQGKAlQ 1297
Cdd:PTZ00121 1741 EDK---KKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGK-E 1816
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1298 ENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSLDLKKRNQEVDLQQEQIQELEKCRSVLE 1367
Cdd:PTZ00121 1817 GNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEE 1886
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1660-2196 |
9.71e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 74.20 E-value: 9.71e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1660 LQQQLQEAREQGELKEQSLQSQLDEAQRALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKERHGELQ 1739
Cdd:COG1196 205 LERQAEKAERYRELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELE 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1740 DHKEQARRLEEELAVEGRRVQALEEVLGDLRAESREQEKALLALQQQCAEQAQEHEVETRALQDSWLQAQAVLKERDQEL 1819
Cdd:COG1196 285 EAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAE 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1820 EALRAESQSSRHQEEAARARAEALQEALGKAHAALQGKEQHLLEQAELSRSLEASTATLQASLDACQAHSRQLEEALRIQ 1899
Cdd:COG1196 365 EALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEAL 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1900 EGEIQDQDLRYQEDVQQLQQALAQRDEELRHQQEREQLLEKSLAQRVQENMIQEKQNLGQEREEEEIRGLHQSVRELQLT 1979
Cdd:COG1196 445 EEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAG 524
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1980 LAQKEQEILELRETQQRNNLEALPHSHKTSPMEEQSLKLDSLEPRLQRELERLQAALRQTEAREIEWREKAQDLALSLAQ 2059
Cdd:COG1196 525 AVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLV 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 2060 TKASVsSLQEVAMFLQASVLERDSEQQRLQDELELTRRALEKERLHSPGATSTAELGSRGEQGVQLGEVSGVEAEPSPDG 2139
Cdd:COG1196 605 ASDLR-EADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEE 683
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 2462579258 2140 MEKQSWRQRLEHLQQAVARLEIDRSRLQRHNVQLRSTLEQVERERRKLKREAMRAAQ 2196
Cdd:COG1196 684 LAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEE 740
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
907-1674 |
3.18e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 72.87 E-value: 3.18e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 907 EQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQE 986
Cdd:PTZ00121 1080 DFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARK 1159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 987 VKEKEADFLAQEAQLLEELEASHITEQQLRASLW--AQEAKAAQLQLRLRSTESQLEALAAEQQPGNqaqaqaqlaslys 1064
Cdd:PTZ00121 1160 AEDARKAEEARKAEDAKKAEAARKAEEVRKAEELrkAEDARKAEAARKAEEERKAEEARKAEDAKKA------------- 1226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1065 alqQALGSVCESRPelsgggdsapsvwglepDQNGARSLFKRGPLLTALSAEAVASALHKLHQDLWKTQQTRDVlrDQVQ 1144
Cdd:PTZ00121 1227 ---EAVKKAEEAKK-----------------DAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKA--DELK 1284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1145 KLEERLTDTEAEKSQVHTELQDLQRQlsqnQEEKSKWEGKQNSLESELMELHETMASLQSRLRRAELQRMEAQGERELLQ 1224
Cdd:PTZ00121 1285 KAEEKKKADEAKKAEEKKKADEAKKK----AEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAE 1360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1225 AAKENLTAQvehlQAAVVEARAQASAAGILEEDLRTARSALKLKNEEVESERERAQALQEQGELKVAQGKALQENLALLT 1304
Cdd:PTZ00121 1361 AAEEKAEAA----EKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEA 1436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1305 QTLAEREEEVETLRGQIQELEKQREMQKAALELLSLD-LKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQER----EQK 1379
Cdd:PTZ00121 1437 KKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADeAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKkkadEAK 1516
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1380 LTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLVTLECLALELEENHHKMECQQKLikelegq 1459
Cdd:PTZ00121 1517 KAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKA------- 1589
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1460 rETQRVALTHLTLDLEERSQELQAQSsqihdlESHSTVLARELQeRDQEVKSQREQIEELQRQKEHLTQDLERRDQELML 1539
Cdd:PTZ00121 1590 -EEARIEEVMKLYEEEKKMKAEEAKK------AEEAKIKAEELK-KAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKI 1661
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1540 QKERIQVLEDQRTRQTKIL---EEDLEQIKLSLRERGRELTTQRQLMQERAEEGKGPSKAQRGSLEHMKLILRDKEKEve 1616
Cdd:PTZ00121 1662 KAAEEAKKAEEDKKKAEEAkkaEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEA-- 1739
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*...
gi 2462579258 1617 cqQEHIHELQELKDQLEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQEAREQGELK 1674
Cdd:PTZ00121 1740 --EEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRME 1795
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
121-648 |
6.63e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.51 E-value: 6.63e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 121 AQLLLLLAKTQELEKEAHERSQELIQLKSQGDLEKAELQDRVTELSALLTQSQKQNEDYEKMIKALRETVEILETNHTEL 200
Cdd:COG1196 267 AELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEEL 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 201 MEHEASLsRNAQEEKLSLQQVIKDITQVMVEEGDNIAQGsghensleldssifsQFDYQDADKALTLVRSVLTRRRQAVQ 280
Cdd:COG1196 347 EEAEEEL-EEAEAELAEAEEALLEAEAELAEAEEELEEL---------------AEELLEALRAAAELAAQLEELEEAEE 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 281 DLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLE 360
Cdd:COG1196 411 ALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAA 490
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 361 QEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQ 440
Cdd:COG1196 491 ARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAK 570
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 441 TEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNAL 520
Cdd:COG1196 571 AGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVT 650
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 521 QVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEV 600
Cdd:COG1196 651 LEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQL 730
|
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 2462579258 601 LARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLES 648
Cdd:COG1196 731 EAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
429-1022 |
1.21e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 70.45 E-value: 1.21e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 429 SHLEGELLRQEQTEVTAALARAEQSIAELSSSentLKTEVADLRAAAVKLSALNEALAlDKVGLNQQLLQLEEENQSVCS 508
Cdd:PRK02224 190 DQLKAQIEEKEEKDLHERLNGLESELAELDEE---IERYEEQREQARETRDEADEVLE-EHEERREELETLEAEIEDLRE 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 509 RMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLE 588
Cdd:PRK02224 266 TIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAE 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 589 QLHQEAKRQEEvlaravqEKEALVREKAALEVRLQAVERDRQDLAEQLqglssakELLESSLFEAQQQNSVIEVTKGQLE 668
Cdd:PRK02224 346 SLREDADDLEE-------RAEELREEAAELESELEEAREAVEDRREEI-------EELEEEIEELRERFGDAPVDLGNAE 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 669 VQIQTVTQAKEVIQGEVRCLKLELDTERsqaeqERDAAARQLAQAeqeGKTALEQQKAAHEKEVNQLREKWEKerswhQQ 748
Cdd:PRK02224 412 DFLEELREERDELREREAELEATLRTAR-----ERVEEAEALLEA---GKCPECGQPVEGSPHVETIEEDRER-----VE 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 749 ELAKALESLEREKMELEMRLkeqqtemeaiqaQREEERTQAESalcqmQLETEKERVSLLETLLQTQKELADA-SQQLER 827
Cdd:PRK02224 479 ELEAELEDLEEEVEEVEERL------------ERAEDLVEAED-----RIERLEERREDLEELIAERRETIEEkRERAEE 541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 828 LRQDMKVQKLKEQETtgilqtqlQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVE 907
Cdd:PRK02224 542 LRERAAELEAEAEEK--------REAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLLAAIADAEDEIERLRE 613
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 908 QEVQEKLRETQEYNRIQKELEREK-------ASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQM 980
Cdd:PRK02224 614 KREALAELNDERRERLAEKRERKReleaefdEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEEL 693
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 2462579258 981 ELLRQEVKEKEADFLAQEAqLLEELEASHITEQQLRASLWAQ 1022
Cdd:PRK02224 694 EELRERREALENRVEALEA-LYDEAEELESMYGDLRAELRQR 734
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
333-1043 |
2.67e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 69.33 E-value: 2.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 333 GEVDSLSKERELLQKAREELRQQLEVLEQE---AWRLRRVNVELQ-LQGDSAQGQKEEQQEELHLAVRERERLQEMLMGL 408
Cdd:TIGR02169 177 EELEEVEENIERLDLIIDEKRQQLERLRRErekAERYQALLKEKReYEGYELLKEKEALERQKEAIERQLASLEEELEKL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 409 EAKQSESLSELITLREALESSHLE-GELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALAL 487
Cdd:TIGR02169 257 TEEISELEKRLEEIEQLLEELNKKiKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLA 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 488 DKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNthleaqlqkaeeagAELQADLRDIQEEKE 567
Cdd:TIGR02169 337 EIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDEL--------------KDYREKLEKLKREIN 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 568 EIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLE 647
Cdd:TIGR02169 403 ELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVE 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 648 SSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCL-----KLELDTERSQAEQERDAAAR-------------- 708
Cdd:TIGR02169 483 KELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVhgtvaQLGSVGERYATAIEVAAGNRlnnvvveddavake 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 709 --QLAQAEQEGK-TALEQQK-AAHEKEVNQLRE---------------KWEKERSW--------HQQELAKAL------- 754
Cdd:TIGR02169 563 aiELLKRRKAGRaTFLPLNKmRDERRDLSILSEdgvigfavdlvefdpKYEPAFKYvfgdtlvvEDIEAARRLmgkyrmv 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 755 ----ESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETLL-QTQKELADASQQLERLR 829
Cdd:TIGR02169 643 tlegELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLdELSQELSDASRKIGEIE 722
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 830 QDMKvQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQ-----DDSQR 904
Cdd:TIGR02169 723 KEIE-QLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSripeiQAELS 801
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 905 LVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLR 984
Cdd:TIGR02169 802 KLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLE 881
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579258 985 QEVKEKEADFLAQEAQlleeLEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEAL 1043
Cdd:TIGR02169 882 SRLGDLKKERDELEAQ----LRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEI 936
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
686-1549 |
4.33e-11 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 68.84 E-value: 4.33e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 686 RCLKLELDTERSQAEQERDAAaRQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMELE 765
Cdd:pfam02463 190 IDLEELKLQELKLKEQAKKAL-EYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLA 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 766 MRLKEQQTEMEAIQAQREEertqaesalcQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGI 845
Cdd:pfam02463 269 QVLKENKEEEKEKKLQEEE----------LKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIE 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 846 LQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQ-VEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQ 924
Cdd:pfam02463 339 ELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLeSERLSSAAKLKEEELELKSEEEKEAQLLLELARQLE 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 925 KELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQmELLRQEVKEKEADFLAQEAQLLEE 1004
Cdd:pfam02463 419 DLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDL-LKETQLVKLQEQLELLLSRQKLEE 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1005 LEAShitEQQLRASLWAQEAKAAQLQLRLRSTESQLEALAAEQQPGNQAQAQAQLASLYSALQQALGSVCESRPELSGGG 1084
Cdd:pfam02463 498 RSQK---ESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELP 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1085 DSAPSVWGLEPDQNGARSLFKRGPLLTALSA----EAVASALHKLHQDLWKTQQTRDVLRDQVQKLEERLTDTEAEKSQV 1160
Cdd:pfam02463 575 LGARKLRLLIPKLKLPLKSIAVLEIDPILNLaqldKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSL 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1161 HTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVEHLQAA 1240
Cdd:pfam02463 655 EEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKI 734
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1241 VVEARAQASAAGILEEDLrTARSALKLKNEEVESERERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVETLRGQ 1320
Cdd:pfam02463 735 NEELKLLKQKIDEEEEEE-EKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEE 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1321 IQELEKQREMQKAALELLSLDLKKRNQEVDLQQEQIQELEKcrsvLEHLPMAVQEREQKLTVQREQIRELEKDRETQRNV 1400
Cdd:pfam02463 814 AELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEE----ELERLEEEITKEELLQELLLKEEELEEQKLKDELE 889
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1401 LEHQLLELEKKDQMIESQRGQVQDLKKQLVTLECLALEleenhHKMECQQKLIKELEGQRETQRVALTHLTLDLEERSQE 1480
Cdd:pfam02463 890 SKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEA-----EILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKR 964
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579258 1481 LQAQSSQIHDLESHSTVLARELQERDQEVKSQREQIEELQRQKEHLTQDLERRDQELMLQKERIQVLED 1549
Cdd:pfam02463 965 LLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQRLKEFLELFVSINKGW 1033
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1140-1646 |
7.49e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 67.76 E-value: 7.49e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1140 RDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRlrraelqRMEAQGE 1219
Cdd:PRK02224 229 REQARETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEE-------RDDLLAE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1220 RELLQAAKENLTAQVEHLQAAVVEaraqasaagiLEEDLRTARSALKLKNEEVESERERAQALQEQGELKVAQGKALQEN 1299
Cdd:PRK02224 302 AGLDDADAEAVEARREELEDRDEE----------LRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1300 LALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSldlkkrnqevdlqqeqiQELEKCRSVLEHLPMAVQEREQK 1379
Cdd:PRK02224 372 LEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAE-----------------DFLEELREERDELREREAELEAT 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1380 LTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLVTLECLALELEENHHKMECQQKLIKELEgQ 1459
Cdd:PRK02224 435 LRTARERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIE-R 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1460 RETQRVALTHLtldLEERSQELQAQSSQIHDLESHSTVLARELQERDQEVKSQREQIEELQRQkehlTQDLERRDQELml 1539
Cdd:PRK02224 514 LEERREDLEEL---IAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREE----VAELNSKLAEL-- 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1540 qKERIQVLEDQRTRQTKIleEDLEQIKLSLRERGRELTTQRQLMQERAEEGKGpskaqrgslehmklilRDKEKEVECQQ 1619
Cdd:PRK02224 585 -KERIESLERIRTLLAAI--ADAEDEIERLREKREALAELNDERRERLAEKRE----------------RKRELEAEFDE 645
|
490 500
....*....|....*....|....*..
gi 2462579258 1620 EHIHELQELKDQLEQQLQGLHRKVGET 1646
Cdd:PRK02224 646 ARIEEAREDKERAEEYLEQVEEKLDEL 672
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1444-2159 |
1.34e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 67.00 E-value: 1.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1444 HKMECQQKLIKELEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQERDQEVKSQREQIEELQRQK 1523
Cdd:TIGR02168 253 EELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKL 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1524 EHLTQDLERRDQELMLQKERIQVLEDQRTRqtkiLEEDLEQIKLSLRERGRELTTQRQLMQERAEEGkgpsKAQRGSLEH 1603
Cdd:TIGR02168 333 DELAEELAELEEKLEELKEELESLEAELEE----LEAELEELESRLEELEEQLETLRSKVAQLELQI----ASLNNEIER 404
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1604 MKLILRDKEKEVECQQEHIHELqeLKDQLEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQEAREQGELKEQSLQSQLD 1683
Cdd:TIGR02168 405 LEARLERLEDRRERLQQEIEEL--LKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAER 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1684 EAQRALAQRDQELEALQQEQQQAQGQEERVKEKAD------------------------ALQGALEQAHMTLKERHGELQ 1739
Cdd:TIGR02168 483 ELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGlsgilgvlselisvdegyeaaieaALGGRLQAVVVENLNAAKKAI 562
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1740 DHKEQARrleeelaVEGRRVQALEEVLGDLRAESREQEKALLALQQQCAEQAQEHEVETRALQDSWLQAQAVLKERDQEL 1819
Cdd:TIGR02168 563 AFLKQNE-------LGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNAL 635
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1820 EALRAESQSSR--HQEEAARARAEALQEALGKAHAALQGKEQHLLEQAELSRSLEASTATLQASLDACQAHSRQLEEALR 1897
Cdd:TIGR02168 636 ELAKKLRPGYRivTLDGDLVRPGGVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELE 715
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1898 IQEGEIQDQDLRYQEDVQQLQQALAQRDEELRHQQEREQLLEKSLAQRVQENMIQEKQNLGQEREEEEIRGLHQSVRELQ 1977
Cdd:TIGR02168 716 QLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLK 795
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1978 LTLAQKEQEILELRETQQRNNLEALPHSHKTSPMEEQ-SLKLDSLEPRLQR------ELERLQAALRQTEAREIEWREKA 2050
Cdd:TIGR02168 796 EELKALREALDELRAELTLLNEEAANLRERLESLERRiAATERRLEDLEEQieelseDIESLAAEIEELEELIEELESEL 875
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 2051 QDLALSLAQTKASVSSLQEVAMFLQASVLERDSEQQRLQDELELTRRALEKERLHSPGATSTAE--LGSRGEQGVQLGEV 2128
Cdd:TIGR02168 876 EALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDnlQERLSEEYSLTLEE 955
|
730 740 750
....*....|....*....|....*....|.
gi 2462579258 2129 sgVEAEPSPDGMEKQSWRQRLEHLQQAVARL 2159
Cdd:TIGR02168 956 --AEALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
296-649 |
2.33e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 66.23 E-value: 2.33e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 296 LQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQL 375
Cdd:TIGR02168 682 LEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEA 761
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 376 QGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIA 455
Cdd:TIGR02168 762 EIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLE 841
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 456 ELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALW 535
Cdd:TIGR02168 842 DLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELR 921
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 536 EKNTHLEAQLQKAEEAGAELQADLRDIQE-EKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEkealvre 614
Cdd:TIGR02168 922 EKLAQLELRLEGLEVRIDNLQERLSEEYSlTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEE------- 994
|
330 340 350
....*....|....*....|....*....|....*
gi 2462579258 615 kaalevrLQAVERDRQDLAEQLQGLSSAKELLESS 649
Cdd:TIGR02168 995 -------YEELKERYDFLTAQKEDLTEAKETLEEA 1022
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
121-632 |
2.91e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 66.11 E-value: 2.91e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 121 AQLLLLLAKTQELEKEAHERSQELIQLKSqgdlEKAELQDRVTELSALLTQSQKQNEDYEKMIKALRETVEILEtnhtEL 200
Cdd:COG1196 288 AEEYELLAELARLEQDIARLEERRRELEE----RLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAE----AE 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 201 MEHEASLSRNAQEEKLSLQQVIKDITQVMVEEGDNIAQGSGHENSLELDSsifsqfdyQDADKALTLVRSVLTRRRQAVQ 280
Cdd:COG1196 360 LAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAE--------EALLERLERLEEELEELEEALA 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 281 DLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQ----L 356
Cdd:COG1196 432 ELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFlegvK 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 357 EVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELL 436
Cdd:COG1196 512 AALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAA 591
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 437 RQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEAlaldkVGLNQQLLQLEEENQSVCSRMEAAEQA 516
Cdd:COG1196 592 LARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRA-----VTLAGRLREVTLEGEGGSAGGSLTGGS 666
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 517 RNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAattQLEQLHQEAKR 596
Cdd:COG1196 667 RRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEA---EREELLEELLE 743
|
490 500 510
....*....|....*....|....*....|....*.
gi 2462579258 597 QEEVLARAVQEKEALVREKAALEVRLQAVERDRQDL 632
Cdd:COG1196 744 EEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
509-1046 |
4.44e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 65.32 E-value: 4.44e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 509 RMEAAEQARNALQvDLAEAEKRREALWEKNTHLEA-----QLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAA 583
Cdd:COG4913 243 ALEDAREQIELLE-PIRELAERYAAARERLAELEYlraalRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDAL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 584 TTQLEQLHQEakrqeeVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQnsvievt 663
Cdd:COG4913 322 REELDELEAQ------IRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAE------- 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 664 kgqlevqiqtVTQAKEVIQGEVRclklELDTERSQAEQERDAAARQLAQAEQEgKTALEQQKAAHEKEVNQLREKW---- 739
Cdd:COG4913 389 ----------AAALLEALEEELE----ALEEALAEAEAALRDLRRELRELEAE-IASLERRKSNIPARLLALRDALaeal 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 740 -----------------EKERSWH-----------------QQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEE 785
Cdd:COG4913 454 gldeaelpfvgelievrPEEERWRgaiervlggfaltllvpPEHYAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDP 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 786 RTQAEsalcqmQLETEKERVS-LLETLLQTQKELA--DASQQLERLRQDMKVQ-KLKEQETTGILQTQLQEAQREL--KE 859
Cdd:COG4913 534 DSLAG------KLDFKPHPFRaWLEAELGRRFDYVcvDSPEELRRHPRAITRAgQVKGNGTRHEKDDRRRIRSRYVlgFD 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 860 AARQhrddLAALQEESSSLLQDKMDLQKQVEDLKSQLvAQDDSQRLVEQEVQEKLRETQEYNRIQKE---LEREKASLTL 936
Cdd:COG4913 608 NRAK----LAALEAELAELEEELAEAEERLEALEAEL-DALQERREALQRLAEYSWDEIDVASAEREiaeLEAELERLDA 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 937 S---LMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQ 1013
Cdd:COG4913 683 SsddLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDA 762
|
570 580 590
....*....|....*....|....*....|...
gi 2462579258 1014 QLRASLWAQEAKAAQLQLRLRSTESQLEALAAE 1046
Cdd:COG4913 763 VERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
259-590 |
4.65e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.46 E-value: 4.65e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 259 QDADKALTLVRSVLTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSL 338
Cdd:TIGR02168 701 AELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEA 780
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 339 SKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSE 418
Cdd:TIGR02168 781 EAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAE 860
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 419 LITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQ 498
Cdd:TIGR02168 861 IEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDN 940
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 499 LeeenqsvcsrmeaAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRH 578
Cdd:TIGR02168 941 L-------------QERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTA 1007
|
330
....*....|..
gi 2462579258 579 QQEAATTQLEQL 590
Cdd:TIGR02168 1008 QKEDLTEAKETL 1019
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
411-945 |
4.83e-10 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 65.32 E-value: 4.83e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 411 KQSESLSELITLREALESSHLEGELLRQEQTevTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKV 490
Cdd:COG4913 249 EQIELLEPIRELAERYAAARERLAELEYLRA--ALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELD 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 491 GLNQQLLQLEEEnqsvcsRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQ 570
Cdd:COG4913 327 ELEAQIRGNGGD------RLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEEL 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 571 KKLSESRHQQEAATTQLEQLHQEAKrqeevlaravQEKEALVREKAALEVRLQAVerdRQDLAEQLqGLSSAK-----EL 645
Cdd:COG4913 401 EALEEALAEAEAALRDLRRELRELE----------AEIASLERRKSNIPARLLAL---RDALAEAL-GLDEAElpfvgEL 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 646 LESSLFEAQQQNSV------------------------IEVTKGQLEVQIQ---TVTQAKEVIQGEVRCLKLELDTERSQ 698
Cdd:COG4913 467 IEVRPEEERWRGAIervlggfaltllvppehyaaalrwVNRLHLRGRLVYErvrTGLPDPERPRLDPDSLAGKLDFKPHP 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 699 AeqeRDAAARQLAQAEQEGKTALEQQKAAHEK------EVNQLREKWEKERSWHQQEL-------AKALESLEREKMELE 765
Cdd:COG4913 547 F---RAWLEAELGRRFDYVCVDSPEELRRHPRaitragQVKGNGTRHEKDDRRRIRSRyvlgfdnRAKLAALEAELAELE 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 766 MRLKEQQTEMEAIQAQREEERTQAEsaLCQMQLETEKERVSlletLLQTQKELADASQQLERLRQDMkvQKLKEqettgi 845
Cdd:COG4913 624 EELAEAEERLEALEAELDALQERRE--ALQRLAEYSWDEID----VASAEREIAELEAELERLDASS--DDLAA------ 689
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 846 LQTQLQEAQRELKEAarqhRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRL-VEQEVQEKLRETQE---YN 921
Cdd:COG4913 690 LEEQLEELEAELEEL----EEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLeLRALLEERFAAALGdavER 765
|
570 580
....*....|....*....|....
gi 2462579258 922 RIQKELEREKASLTLSLMEKEQRL 945
Cdd:COG4913 766 ELRENLEERIDALRARLNRAEEEL 789
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1257-1776 |
7.76e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 64.68 E-value: 7.76e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1257 DLRTARSALKLKNEEVESERERAQALQEQGELKVAQGKALQENLALL-------TQTLAEREEEVETLRGQIQELEKQRE 1329
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLeaeiedlRETIAETEREREELAEEVRDLRERLE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1330 MQKAALELLSLDLKKRNQEVDLQQEQIQELEK----CRSVLEHLPMAVQEREQKLTVQREQIRELEKDRETQRNVLEHQL 1405
Cdd:PRK02224 290 ELEEERDDLLAEAGLDDADAEAVEARREELEDrdeeLRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1406 LELEKKDQMIESQRGQVQDLKKQLVTLECLALELEENHHKMECQQKLIKE----LEGQRETQRVALTHLTLDLEERSQEL 1481
Cdd:PRK02224 370 SELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREerdeLREREAELEATLRTARERVEEAEALL 449
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1482 QAQSSQIHDLESHSTVLARELQERDQEVKSQREQIEELQRQKEHLTQDLERRDQ------ELMLQKERIQVLEDQRTRQT 1555
Cdd:PRK02224 450 EAGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDlveaedRIERLEERREDLEELIAERR 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1556 KILEEDLEQIKlSLRERGRELTTQRQLMQERAEEGKGPSKAQRGSLEHMKLILRDKEKEVEcQQEHIHELQELKDQLEQQ 1635
Cdd:PRK02224 530 ETIEEKRERAE-ELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIE-SLERIRTLLAAIADAEDE 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1636 LQGLHRKVGETSLLLSQReqeivvlQQQLQEAREQ-GELKEQSLQSQLDEAQRALAQRDQELEALQQEQQQAQGQEERVK 1714
Cdd:PRK02224 608 IERLREKREALAELNDER-------RERLAEKRERkRELEAEFDEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQ 680
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462579258 1715 EKADALQGALEQAHmTLKERHGELQDHKEQARRLEEElavegrrVQALEEVLGDLRAESREQ 1776
Cdd:PRK02224 681 AEIGAVENELEELE-ELRERREALENRVEALEALYDE-------AEELESMYGDLRAELRQR 734
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
275-765 |
8.88e-10 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 64.29 E-value: 8.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 275 RRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRq 354
Cdd:PRK02224 249 RREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELR- 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 355 qlEVLEQEAWRLRRVNVELQLQGDSAQGQKEeqqeelhlavrERERLQEMLMGLEAKQSESLSELITLREALESSHLEGE 434
Cdd:PRK02224 328 --DRLEECRVAAQAHNEEAESLREDADDLEE-----------RAEELREEAAELESELEEAREAVEDRREEIEELEEEIE 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 435 LLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKL-SALNEALALDKVGLNQQLLQLEEENQSVCSRMEAA 513
Cdd:PRK02224 395 ELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTArERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDR 474
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 514 EQarnalqvdLAEAEKRREALWEKNTHLEAQLQKAEEAgAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQE 593
Cdd:PRK02224 475 ER--------VEELEAELEDLEEEVEEVEERLERAEDL-VEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRER 545
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 594 AKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLssakELLESSLFEAQQQNSVIEVTKGQLEVQIQT 673
Cdd:PRK02224 546 AAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESL----ERIRTLLAAIADAEDEIERLREKREALAEL 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 674 VTQAKEVIQGE---VRCLKLELDTER-SQAEQERDAAARQLAQAE------QEGKTALEQQKAAHEKEVNQLREKweKER 743
Cdd:PRK02224 622 NDERRERLAEKrerKRELEAEFDEARiEEAREDKERAEEYLEQVEekldelREERDDLQAEIGAVENELEELEEL--RER 699
|
490 500
....*....|....*....|..
gi 2462579258 744 SWHQQELAKALESLEREKMELE 765
Cdd:PRK02224 700 REALENRVEALEALYDEAEELE 721
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1476-2189 |
2.73e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.77 E-value: 2.73e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1476 ERSQELQAQSSQIHDLESHstVLARELQERDQEVKSQREQIEELQRQKEHLTQDLERRDQELMLQKERIQVLEDQRTRQT 1555
Cdd:TIGR02168 210 EKAERYKELKAELRELELA--LLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQ 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1556 KILEE------DLEQIKLSLRERGRELTTQRQLMQERAEEGKGPSKAQRGSLEHMKLILRDKEKEVECQQEHIHELQELK 1629
Cdd:TIGR02168 288 KELYAlaneisRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAEL 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1630 DQLEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQEAREQgelKEQSLQSQLDEAQRALAQRDQELEALQQEQQQAQGQ 1709
Cdd:TIGR02168 368 EELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEAR---LERLEDRRERLQQEIEELLKKLEEAELKELQAELEE 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1710 EERVKEKADALQGALEQAHMTLKERHGELQDHKEQARRLEEELAVEGRRVQALEEVLGDLRAESREQEKALLALQQQCAE 1789
Cdd:TIGR02168 445 LEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGV 524
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1790 QAQEHEVETR-------ALQDSwlqAQAVLKERDQE-LEALRAESQSSRHQEEAARARAEALQEALGKAHAALQGKEQHL 1861
Cdd:TIGR02168 525 LSELISVDEGyeaaieaALGGR---LQAVVVENLNAaKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFL 601
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1862 LEQAELSRSLEASTATLQA---------SLDACQAHSRQLEEALRI--QEGE-IQDQDLRYQEDVQQLQQALAQRDEELR 1929
Cdd:TIGR02168 602 GVAKDLVKFDPKLRKALSYllggvlvvdDLDNALELAKKLRPGYRIvtLDGDlVRPGGVITGGSAKTNSSILERRREIEE 681
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1930 HQQEREQLLEKSLAQRVQENMIQEKQNLGQEReeeeirglhqsVRELQLTLAQKEQEILELRETQQRNNLEALPHSHKTS 2009
Cdd:TIGR02168 682 LEEKIEELEEKIAELEKALAELRKELEELEEE-----------LEQLRKELEELSRQISALRKDLARLEAEVEQLEERIA 750
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 2010 PMEEQSLKLDSLEPRLQRELERLQAALRQTEAREIEWREKAQDLALSLAQTKASVSSLQEVAMFLQASVLERDSEQQRLQ 2089
Cdd:TIGR02168 751 QLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLE 830
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 2090 DELELTRRALEkerlhspgaTSTAELGSRGEQGVQLgEVSGVEAEPSPDGMEKQswrqrLEHLQQAVARLEIDRSRLQRH 2169
Cdd:TIGR02168 831 RRIAATERRLE---------DLEEQIEELSEDIESL-AAEIEELEELIEELESE-----LEALLNERASLEEALALLRSE 895
|
730 740
....*....|....*....|....
gi 2462579258 2170 NVQLRSTLEQVERE----RRKLKR 2189
Cdd:TIGR02168 896 LEELSEELRELESKrselRRELEE 919
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
508-1328 |
2.89e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.78 E-value: 2.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 508 SRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDI-QEEKEEIQKKLSESRHQQEAATTQ 586
Cdd:TIGR02169 230 KEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLgEEEQLRVKEKIGELEAEIASLERS 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 587 LEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQ 666
Cdd:TIGR02169 310 IAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKD 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 667 LEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQ--AEQEGKTALEQQKAAHEKEVNQLREKWEKERs 744
Cdd:TIGR02169 390 YREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKinELEEEKEDKALEIKKQEWKLEQLAADLSKYE- 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 745 whqqelaKALESLEREKMELEMRLKEQQTEMEAIQAQREE-ERTQAESALCQMQLETEKERV-SLLETLLQTQKELADAS 822
Cdd:TIGR02169 469 -------QELYDLKEEYDRVEKELSKLQRELAEAEAQARAsEERVRGGRAVEEVLKASIQGVhGTVAQLGSVGERYATAI 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 823 QQLERLRQDMKVQKLKEQETTGILQTQLQEAQR----ELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVED-----LK 893
Cdd:TIGR02169 542 EVAAGNRLNNVVVEDDAVAKEAIELLKRRKAGRatflPLNKMRDERRDLSILSEDGVIGFAVDLVEFDPKYEPafkyvFG 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 894 SQLVAQD--------DSQRLV--EQEVQEK---------------------LRETQEYNRIQKELEREKASLTLSLMEKE 942
Cdd:TIGR02169 622 DTLVVEDieaarrlmGKYRMVtlEGELFEKsgamtggsraprggilfsrsePAELQRLRERLEGLKRELSSLQSELRRIE 701
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 943 QRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEadflaqeaqllEELEASHITEQQLRASLWAQ 1022
Cdd:TIGR02169 702 NRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLE-----------QEIENVKSELKELEARIEEL 770
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1023 EAKAAQLQLRLRSTESQLealaaeqqpgnqaqaqaqLASLYSALQQALGSVCESRPELSGggdsapsvwglepdqngars 1102
Cdd:TIGR02169 771 EEDLHKLEEALNDLEARL------------------SHSRIPEIQAELSKLEEEVSRIEA-------------------- 812
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1103 lfkrgplltalSAEAVASALHKLHQDLWKTQQTRDVLRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWE 1182
Cdd:TIGR02169 813 -----------RLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLE 881
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1183 GKQNSLESELMELHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVEHLQAAVVEARAQASAAGILEEdlrtar 1262
Cdd:TIGR02169 882 SRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLED------ 955
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462579258 1263 saLKLKNEEVEserERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQR 1328
Cdd:TIGR02169 956 --VQAELQRVE---EEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKK 1016
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
257-737 |
4.30e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 62.24 E-value: 4.30e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 257 DYQDADKALTLVRSVLT-----RRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVD- 330
Cdd:COG4913 263 RYAAARERLAELEYLRAalrlwFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEq 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 331 LQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAV-----------RERE 399
Cdd:COG4913 343 LEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALaeaeaalrdlrRELR 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 400 RLQEMLMGLEAKQSESLSELITLREALESsHLE---------GELL--RQEQTEVTAALARAeqsiaeLSSSENTLKTEV 468
Cdd:COG4913 423 ELEAEIASLERRKSNIPARLLALRDALAE-ALGldeaelpfvGELIevRPEEERWRGAIERV------LGGFALTLLVPP 495
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 469 ADLRAAAVKLSALNEALALD--KVGLNQQLLQLEE-ENQSVCSRMEAAE------------QARNALQVDLAEAEKR--- 530
Cdd:COG4913 496 EHYAAALRWVNRLHLRGRLVyeRVRTGLPDPERPRlDPDSLAGKLDFKPhpfrawleaelgRRFDYVCVDSPEELRRhpr 575
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 531 ----------REALWEKNTHLEAQLQ-----KAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAK 595
Cdd:COG4913 576 aitragqvkgNGTRHEKDDRRRIRSRyvlgfDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAE 655
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 596 RQEEVLARAvqekeALVREKAALEVRLQAVERDRQDLA---EQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQ 672
Cdd:COG4913 656 YSWDEIDVA-----SAEREIAELEAELERLDASSDDLAaleEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELD 730
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462579258 673 TVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLRE 737
Cdd:COG4913 731 ELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
279-934 |
4.80e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.01 E-value: 4.80e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 279 VQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEV 358
Cdd:TIGR02169 296 IGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEE 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 359 LEQEAWRLRRVNVELQLQGD-------SAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESShl 431
Cdd:TIGR02169 376 VDKEFAETRDELKDYREKLEklkreinELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQ-- 453
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 432 EGEL----------------LRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALaldkVGLNQQ 495
Cdd:TIGR02169 454 EWKLeqlaadlskyeqelydLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGV----HGTVAQ 529
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 496 LLQLEEENQSVCsrmEAAEQARNALQV--DLAEAEKRREALWEKNT------------HLEAQLQKAEEAGAELQA-DLR 560
Cdd:TIGR02169 530 LGSVGERYATAI---EVAAGNRLNNVVveDDAVAKEAIELLKRRKAgratflplnkmrDERRDLSILSEDGVIGFAvDLV 606
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 561 DIQEEKEEIQKKL-----------SESRHQQEAATTQLEQLHQE----------AKRQEEVLARAVQEKEALVREkaale 619
Cdd:TIGR02169 607 EFDPKYEPAFKYVfgdtlvvedieAARRLMGKYRMVTLEGELFEksgamtggsrAPRGGILFSRSEPAELQRLRE----- 681
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 620 vRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQ- 698
Cdd:TIGR02169 682 -RLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSEl 760
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 699 -------AEQERDAAARQLAQAEQEGKTALE--QQKAAHEKEVNQLREKWEKErswhQQELAKALESLEREKMELEMRLK 769
Cdd:TIGR02169 761 keleariEELEEDLHKLEEALNDLEARLSHSriPEIQAELSKLEEEVSRIEAR----LREIEQKLNRLTLEKEYLEKEIQ 836
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 770 EQQTEMEAIQAQREEERtqAESALCQMQLETEKERVSLLET-LLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQT 848
Cdd:TIGR02169 837 ELQEQRIDLKEQIKSIE--KEIENLNGKKEELEEELEELEAaLRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEK 914
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 849 Q-----LQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRI 923
Cdd:TIGR02169 915 KrkrlsELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEK 994
|
730
....*....|.
gi 2462579258 924 QKELEREKASL 934
Cdd:TIGR02169 995 RAKLEEERKAI 1005
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1299-1752 |
5.37e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 61.57 E-value: 5.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1299 NLALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSLDLKKRNQEVDLQQEQIQELekcRSVLEHLPMAVQEREQ 1378
Cdd:TIGR04523 198 KLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQL---KDEQNKIKKQLSEKQK 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1379 KLTVQREQIRELEKdretQRNVLEHQLLELEKKDQM---------IESQRGQVQDLKKQLVTLECLALELEENHHKMEcq 1449
Cdd:TIGR04523 275 ELEQNNKKIKELEK----QLNQLKSEISDLNNQKEQdwnkelkseLKNQEKKLEEIQNQISQNNKIISQLNEQISQLK-- 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1450 qKLIKELEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQERDQEVKSQREQIEELQRQKEHLTQD 1529
Cdd:TIGR04523 349 -KELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKE 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1530 LERRDQELMLQKERIQVLEDQRTRQTKILEedleqiklslrergrELTTQRQLMQERAEEGKGPSKAQRGSLEHMKLILR 1609
Cdd:TIGR04523 428 IERLKETIIKNNSEIKDLTNQDSVKELIIK---------------NLDNTRESLETQLKVLSRSINKIKQNLEQKQKELK 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1610 DKEKEVECQQEHIHELQELKDQLEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQEAREqgELKEQSLQSQLDEAQRAL 1689
Cdd:TIGR04523 493 SKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDF--ELKKENLEKEIDEKNKEI 570
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462579258 1690 AQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKERHGELQDHKEQARRLEEEL 1752
Cdd:TIGR04523 571 EELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSII 633
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
401-946 |
5.57e-09 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 61.67 E-value: 5.57e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 401 LQEMLMGLEAKQSESLSELITLREALESSHLEGELLrQEQTEVTAALARAEQSI--AELSSSENTLKTEVADLRAAAVKL 478
Cdd:pfam15921 262 LQQHQDRIEQLISEHEVEITGLTEKASSARSQANSI-QSQLEIIQEQARNQNSMymRQLSDLESTVSQLRSELREAKRMY 340
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 479 SALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQAD 558
Cdd:pfam15921 341 EDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRE 420
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 559 LRDIQEEKEEIQKKL----SESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEAL---VREKAALEVRLQAVERDRQD 631
Cdd:pfam15921 421 LDDRNMEVQRLEALLkamkSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLrkvVEELTAKKMTLESSERTVSD 500
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 632 LAEQLQGLSSAkelLESSLFEAQQQNSVIEVTKGQLEvQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLA 711
Cdd:pfam15921 501 LTASLQEKERA---IEATNAEITKLRSRVDLKLQELQ-HLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQ 576
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 712 QAEQEGKTA--LEQQKAAHEKEVNqlrekwekERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAIqaqreeerTQA 789
Cdd:pfam15921 577 LVGQHGRTAgaMQVEKAQLEKEIN--------DRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKL--------VNA 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 790 ESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKeaarQHRDDLA 869
Cdd:pfam15921 641 GSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELE----QTRNTLK 716
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 870 ALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEV----QEKLRETQEYNRIQKEL-----EREKASLTLSLME 940
Cdd:pfam15921 717 SMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMtnanKEKHFLKEEKNKLSQELstvatEKNKMAGELEVLR 796
|
....*.
gi 2462579258 941 KEQRLL 946
Cdd:pfam15921 797 SQERRL 802
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
492-816 |
6.28e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 61.62 E-value: 6.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 492 LNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQK 571
Cdd:TIGR02169 707 LSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEA 786
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 572 KLSESRHQQeaATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLF 651
Cdd:TIGR02169 787 RLSHSRIPE--IQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKE 864
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 652 EAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEqegktALEQQKAAHEKE 731
Cdd:TIGR02169 865 ELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLE-----ALEEELSEIEDP 939
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 732 VNQLREKWEKERSWHQqeLAKALESLEREKMELEmrlkeqQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETL 811
Cdd:TIGR02169 940 KGEDEEIPEEELSLED--VQAELQRVEEEIRALE------PVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEE 1011
|
....*
gi 2462579258 812 LQTQK 816
Cdd:TIGR02169 1012 YEKKK 1016
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
278-989 |
7.19e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 61.62 E-value: 7.19e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 278 AVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDL-QGEVDSLSKERELLQKAREELRQQL 356
Cdd:TIGR02169 231 EKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLgEEEQLRVKEKIGELEAEIASLERSI 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 357 EVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELL 436
Cdd:TIGR02169 311 AEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDY 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 437 RQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQA 516
Cdd:TIGR02169 391 REKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQE 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 517 RNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLE-----QLH 591
Cdd:TIGR02169 471 LYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEvaagnRLN 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 592 QEAKRQEEVLARAVQ---EKEA-------------------LVREKAALEVRLQAVERDRQ------------------D 631
Cdd:TIGR02169 551 NVVVEDDAVAKEAIEllkRRKAgratflplnkmrderrdlsILSEDGVIGFAVDLVEFDPKyepafkyvfgdtlvvediE 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 632 LAEQLQG----LSSAKELLESS--LFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLEL---DTERSQAEQE 702
Cdd:TIGR02169 631 AARRLMGkyrmVTLEGELFEKSgaMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELrriENRLDELSQE 710
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 703 RDAAARQLAQAEQEGKtALEQQKAAHEKEVNQLREKwekerswhQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQR 782
Cdd:TIGR02169 711 LSDASRKIGEIEKEIE-QLEQEEEKLKERLEELEED--------LSSLEQEIENVKSELKELEARIEELEEDLHKLEEAL 781
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 783 EE-ERTQAESALCQMQLET---EKERVSL----------LETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQT 848
Cdd:TIGR02169 782 NDlEARLSHSRIPEIQAELsklEEEVSRIearlreieqkLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNG 861
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 849 QLQEAQRELKEAA---RQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQK 925
Cdd:TIGR02169 862 KKEELEEELEELEaalRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKG 941
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2462579258 926 ELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALrQDMQEAQGEQKELSAQMELLRQEVKE 989
Cdd:TIGR02169 942 EDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAI-QEYEEVLKRLDELKEKRAKLEEERKA 1004
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
396-1011 |
9.54e-09 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 60.89 E-value: 9.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 396 RERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAA 475
Cdd:pfam05483 85 KEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATRHLCNLLKETC 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 476 VKLSALNEALALDKVGLNQQLLQLeeeNQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKaEEAGAEL 555
Cdd:pfam05483 165 ARSAEKTKKYEYEREETRQVYMDL---NNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKK-EINDKEK 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 556 QADLRDIQEEKEEiqKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQ-------AVERD 628
Cdd:pfam05483 241 QVSLLLIQITEKE--NKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQrsmstqkALEED 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 629 RQDLAEQLQGLSSAKELLESSLFEAQQQNSVI----EVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERD 704
Cdd:pfam05483 319 LQIATKTICQLTEEKEAQMEELNKAKAAHSFVvtefEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTK 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 705 AAARQLAQAEQEGKTALEQQKAAHEkevNQLREKWEKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREE 784
Cdd:pfam05483 399 FKNNKEVELEELKKILAEDEKLLDE---KKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVED 475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 785 ERTQAESALCQMQLETEKERVSLLETLLQTQkELADASQQLERLRQDMKVQKLKEQETTGILQTqlqeaqreLKEAARQH 864
Cdd:pfam05483 476 LKTELEKEKLKNIELTAHCDKLLLENKELTQ-EASDMTLELKKHQEDIINCKKQEERMLKQIEN--------LEEKEMNL 546
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 865 RDDLAALQEEsssllqdkmdLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQR 944
Cdd:pfam05483 547 RDELESVREE----------FIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQE 616
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462579258 945 LLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHIT 1011
Cdd:pfam05483 617 NKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAI 683
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
511-739 |
1.23e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 59.39 E-value: 1.23e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 511 EAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQL 590
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQ 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 591 HQEAKRQEEVLARAVQEKEALV----REKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQ 666
Cdd:COG4942 103 KEELAELLRALYRLGRQPPLALllspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAE 182
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462579258 667 LEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKW 739
Cdd:COG4942 183 LEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKGKL 255
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
324-682 |
2.00e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 60.08 E-value: 2.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 324 LAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRvnvelqlqgdsaqgqkeeQQEELHLAVRERERLQE 403
Cdd:TIGR02169 665 GILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQ------------------ELSDASRKIGEIEKEIE 726
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 404 MLMGLEAKQSESLSELitlREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAavKLSALNE 483
Cdd:TIGR02169 727 QLEQEEEKLKERLEEL---EEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIP--EIQAELS 801
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 484 ALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQ 563
Cdd:TIGR02169 802 KLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLE 881
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 564 EEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVER------DRQDLAEQLQ 637
Cdd:TIGR02169 882 SRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEipeeelSLEDVQAELQ 961
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2462579258 638 GLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQ 682
Cdd:TIGR02169 962 RVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAIL 1006
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1240-1464 |
2.00e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 59.01 E-value: 2.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1240 AVVEARAQASAAGILEEDLRTARSALKLKNEEVESERERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVETLRG 1319
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1320 QIQELEKQREMQKAALELLSLDLKKRNQ----EVDLQQEQIQELEKCRSVLEHLPMAVQEREQKLTVQREQIRELEKDRE 1395
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRALYRLGRqpplALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1396 TQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLVTLECLALELEENHHKMECQ-QKLIKELEGQRETQR 1464
Cdd:COG4942 171 AERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEElEALIARLEAEAAAAA 240
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
123-368 |
2.00e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 59.01 E-value: 2.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 123 LLLLLAKTQELEKEAHERSQELIQLKSQgdleKAELQDRVTELSALLTQSQKQNEDYEKMIKALRETVEILETNHTELME 202
Cdd:COG4942 8 ALLLALAAAAQADAAAEAEAELEQLQQE----IAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 203 HEASLSRNAQEEKLSLQQVIKDITQVMVEegdniAQGSGHENSLELdssIFSQFDYQDADKALTLVRSVLTRRRQAVQDL 282
Cdd:COG4942 84 ELAELEKEIAELRAELEAQKEELAELLRA-----LYRLGRQPPLAL---LLSPEDFLDAVRRLQYLKYLAPARREQAEEL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 283 RQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQE 362
Cdd:COG4942 156 RADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
....*.
gi 2462579258 363 AWRLRR 368
Cdd:COG4942 236 AAAAAE 241
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
750-988 |
2.69e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 58.62 E-value: 2.69e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 750 LAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQlETEKERVSLLETLLQTQKELADASQQLERLR 829
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLA-ALERRIAALARRIRALEQELAALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 830 QDMKVQKLKEQETTGILQTQLQEAQRelkeAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQE 909
Cdd:COG4942 90 KEIAELRAELEAQKEELAELLRALYR----LGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAAL 165
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579258 910 VQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVK 988
Cdd:COG4942 166 RAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTP 244
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
523-892 |
2.79e-08 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 59.59 E-value: 2.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 523 DLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLeQLHQEAKRQEEVLA 602
Cdd:PRK04863 273 DYMRHANERRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHL-NLVQTALRQQEKIE 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 603 RAVQEKEALV--------------REKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLE 668
Cdd:PRK04863 352 RYQADLEELEerleeqnevveeadEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQTRAIQYQQAVQALERAKQLCG 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 669 VQIQTVTQAKEVIQgEVRCLKLELDTERSQAEQE---RDAAARQLAQAEQEGKTALEQ--QKAAHEKEVNQLREkWEKer 743
Cdd:PRK04863 432 LPDLTADNAEDWLE-EFQAKEQEATEELLSLEQKlsvAQAAHSQFEQAYQLVRKIAGEvsRSEAWDVARELLRR-LRE-- 507
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 744 swhQQELAKALESLEREKMELEMRLKEQQTEMEAIQ--AQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELADA 821
Cdd:PRK04863 508 ---QRHLAEQLQQLRMRLSELEQRLRQQQRAERLLAefCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMAL 584
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 822 SQQLERLRQDmkVQKLKEQETTGI--------LQTQLQEAQ---RELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVE 890
Cdd:PRK04863 585 RQQLEQLQAR--IQRLAARAPAWLaaqdalarLREQSGEEFedsQDVTEYMQQLLERERELTVERDELAARKQALDEEIE 662
|
..
gi 2462579258 891 DL 892
Cdd:PRK04863 663 RL 664
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
730-1588 |
3.02e-08 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 59.60 E-value: 3.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 730 KEVNQLREKWEKERSWHQQELA-----KALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKER 804
Cdd:pfam02463 142 GKIEIIAMMKPERRLEIEEEAAgsrlkRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLEL 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 805 VSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAARQhrddlaalQEESSSLLQDKMD 884
Cdd:pfam02463 222 EEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKE--------KKLQEEELKLLAK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 885 LQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRetqeynRIQKELEREKASL-------------TLSLMEKEQRLLVLQEA 951
Cdd:pfam02463 294 EEEELKSELLKLERRKVDDEEKLKESEKEKK------KAEKELKKEKEEIeelekelkeleikREAEEEEEEELEKLQEK 367
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 952 DSIRQQELSALRQDMQEAQGEQKELsAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQ-----QLRASLWAQEAKA 1026
Cdd:pfam02463 368 LEQLEEELLAKKKLESERLSSAAKL-KEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEEleileEEEESIELKQGKL 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1027 AQLQLRLRSTESQLEALAAEQQPGNQAQAQAQLASLYSALQQALGSVCESRPELSGGGDSAPSVWGLEPDQNGARSLFKR 1106
Cdd:pfam02463 447 TEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIIS 526
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1107 GPLLTALSAEAVASALHKLHQDLWKTQQTRDVLRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQN 1186
Cdd:pfam02463 527 AHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLA 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1187 SLESELMELHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVEHLQAAVVEARAQASaagiLEEDLRTARSALK 1266
Cdd:pfam02463 607 QLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLS----ELTKELLEIQELQ 682
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1267 LKNEEVESERERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSLDLKKRN 1346
Cdd:pfam02463 683 EKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEK 762
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1347 QEVDLQQEQIQELEKCRSVLEHLPMAVQEREQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLK 1426
Cdd:pfam02463 763 EEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALEL 842
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1427 KQLVTLECLALELEENHHKMECQQKLIKELEGQR-ETQRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQER 1505
Cdd:pfam02463 843 KEEQKLEKLAEEELERLEEEITKEELLQELLLKEeELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEER 922
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1506 DQEVKSQREQIEELQRqKEHLTQDLERRDQE--LMLQKERIQVLEDQRTRQTKILEEDLEQIKLSLRERGRELTTQRQLM 1583
Cdd:pfam02463 923 IKEEAEILLKYEEEPE-ELLLEEADEKEKEEnnKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLE 1001
|
....*
gi 2462579258 1584 QERAE 1588
Cdd:pfam02463 1002 EEKKK 1006
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1116-1820 |
3.63e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 59.31 E-value: 3.63e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1116 EAVASALHKLHQDLWKTQQTRDVLRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMEL 1195
Cdd:TIGR02169 332 DKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRL 411
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1196 HETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVEHLQAAVVEARAQASAAGILEEDLRTARSALKLKNEEVESE 1275
Cdd:TIGR02169 412 QEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRE 491
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1276 RERAQALQEQGELKVAQGKALQENLalltqtlaerEEEVETLRGQIQELEKQREMQKAALEL-LSLDLKKRNQEVDLQQE 1354
Cdd:TIGR02169 492 LAEAEAQARASEERVRGGRAVEEVL----------KASIQGVHGTVAQLGSVGERYATAIEVaAGNRLNNVVVEDDAVAK 561
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1355 QIQELEKCRSVlehlpmavqEREQKLTVQREQIRELEKDRETQRNVLEHqLLELEKKDQMIESQRGQVqdLKKQLVTLEC 1434
Cdd:TIGR02169 562 EAIELLKRRKA---------GRATFLPLNKMRDERRDLSILSEDGVIGF-AVDLVEFDPKYEPAFKYV--FGDTLVVEDI 629
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1435 LALELEENHHKMECQQKLIKELEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQERDQEVKSQRE 1514
Cdd:TIGR02169 630 EAARRLMGKYRMVTLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQ 709
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1515 QIEELQRQKEHLTQDLERRDQELMLQKERIqvledqrtrqtKILEEDLEQIKLSLRERGRELTTQRQLMQERaEEGKGPS 1594
Cdd:TIGR02169 710 ELSDASRKIGEIEKEIEQLEQEEEKLKERL-----------EELEEDLSSLEQEIENVKSELKELEARIEEL-EEDLHKL 777
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1595 KAQRGSLEHmklilRDKEKEVECQQEHIHELQELKDQLEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQEAREQ---- 1670
Cdd:TIGR02169 778 EEALNDLEA-----RLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQiksi 852
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1671 ------GELKEQSLQSQLDEAQRALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKERHGELQDHKEQ 1744
Cdd:TIGR02169 853 ekeienLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEE 932
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462579258 1745 ARRLEEELAvEGRRVQALEEVLGDLRAESREQEKALLALQQQCAEQAQEHEVETRALQDSWLQAQAVLKERDQELE 1820
Cdd:TIGR02169 933 LSEIEDPKG-EDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILE 1007
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1155-1379 |
4.17e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 57.85 E-value: 4.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1155 AEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQV 1234
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1235 EHLQAAVVEARAQASAAGileedlRTARSALKLKNEEVESERERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEV 1314
Cdd:COG4942 100 EAQKEELAELLRALYRLG------RQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAER 173
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462579258 1315 ETLRGQIQELEKQREMQKAALELLSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQEREQK 1379
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1367-1993 |
4.67e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 58.59 E-value: 4.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1367 EHLPMAVQEREQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLVTLECLALELEENH-HK 1445
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTvHE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1446 MECQQKLIKELEGQRETQRVALTHLTLDLEERSQEL--------QAQSSQIHDLESHSTV--------LARELQERDQEV 1509
Cdd:pfam15921 154 LEAAKCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIrsilvdfeEASGKKIYEHDSMSTMhfrslgsaISKILRELDTEI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1510 KSQREQIEELQRQKEHLTQDLERRdQELMLQKERIQVleDQRTRQTKILEEDLEQIKLSLRERGRELTTQRQLMQERAEE 1589
Cdd:pfam15921 234 SYLKGRIFPVEDQLEALKSESQNK-IELLLQQHQDRI--EQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARN 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1590 GKGPSKAQRGSLEHMKLILRDKEKEVECQQEHIHElqelkdQLEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQEARE 1669
Cdd:pfam15921 311 QNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIE------ELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLA 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1670 QGELKEQSLQSQLDEAQRaLAQRDQELEALQQEQQQAQGQEERVKEKADAL--------QGALEQAHMTLKERH------ 1735
Cdd:pfam15921 385 DLHKREKELSLEKEQNKR-LWDRDTGNSITIDHLRRELDDRNMEVQRLEALlkamksecQGQMERQMAAIQGKNeslekv 463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1736 ----GELQDHKEQARRLEEELAVEGRRVQALEEVLGDLRAESREQEKALLALQQQCaeqaqeheVETRALQDSWLQAQAV 1811
Cdd:pfam15921 464 ssltAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEI--------TKLRSRVDLKLQELQH 535
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1812 LKERDQELEALRAESQSSRHQEEAARARAEALQEalgkahaALQGKEQHLLEQAELSRSLEASTATLQASLDACQAHSRQ 1891
Cdd:pfam15921 536 LKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQ-------QIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQE 608
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1892 LEEALRIQEGEIQDQDLRYQEDVQQLQQALAQRDEELRH----QQEREQLLEKSLAQRVQENMIQEKQNLGQEREEEEIR 1967
Cdd:pfam15921 609 FKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAvkdiKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSE 688
|
650 660
....*....|....*....|....*.
gi 2462579258 1968 GLHQSVRELQLTLAQKEQEILELRET 1993
Cdd:pfam15921 689 EMETTTNKLKMQLKSAQSELEQTRNT 714
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1105-1334 |
4.76e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 57.85 E-value: 4.76e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1105 KRGPLLTALSAEAVASALHKLHQDLwktQQTRDVLRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGK 1184
Cdd:COG4942 1 MRKLLLLALLLALAAAAQADAAAEA---EAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1185 QNSLESELMELHETMASLQSRLRR---------AELQRMEAQGERELLQAAK---------ENLTAQVEHLQAAVVEARA 1246
Cdd:COG4942 78 LAALEAELAELEKEIAELRAELEAqkeelaellRALYRLGRQPPLALLLSPEdfldavrrlQYLKYLAPARREQAEELRA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1247 QASAAGILEEDLRTARSALKLKNEEVESERERAQALQEQGELKVAQgkaLQENLALLTQTLAEREEEVETLRGQIQELEK 1326
Cdd:COG4942 158 DLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLAR---LEKELAELAAELAELQQEAEELEALIARLEA 234
|
....*...
gi 2462579258 1327 QREMQKAA 1334
Cdd:COG4942 235 EAAAAAER 242
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
528-1217 |
4.79e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 58.59 E-value: 4.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 528 EKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQE 607
Cdd:pfam15921 102 EKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMMLS 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 608 KEALVREKAALEVRLQAV------ERDRQD----------LAEQLQGLSSAKELLESSLFEAQQQnsvIEVTKGQLEVQI 671
Cdd:pfam15921 182 HEGVLQEIRSILVDFEEAsgkkiyEHDSMStmhfrslgsaISKILRELDTEISYLKGRIFPVEDQ---LEALKSESQNKI 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 672 QTVTQAKeviQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREkWEKERSWHQQELA 751
Cdd:pfam15921 259 ELLLQQH---QDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSD-LESTVSQLRSELR 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 752 KALESLEREKMELEMRLKEQQTEMeaIQAQREEERTQAESALCQMQLEtekervSLLETLLQTQKELADASQQLERL--- 828
Cdd:pfam15921 335 EAKRMYEDKIEELEKQLVLANSEL--TEARTERDQFSQESGNLDDQLQ------KLLADLHKREKELSLEKEQNKRLwdr 406
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 829 -----------RQDMKVQKLKEQETTGILQTQLQEAQRELKE---AARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKS 894
Cdd:pfam15921 407 dtgnsitidhlRRELDDRNMEVQRLEALLKAMKSECQGQMERqmaAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTA 486
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 895 QLVAQDDSQRLVEQ---EVQEKLRETQEYNriqKELEREKASLTLSLMEKEQrllVLQEADSIR--QQELSALRQDMQEA 969
Cdd:pfam15921 487 KKMTLESSERTVSDltaSLQEKERAIEATN---AEITKLRSRVDLKLQELQH---LKNEGDHLRnvQTECEALKLQMAEK 560
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 970 QGEQKELSAQMELLRQEVKE---KEADFLAQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTEsqleaLAAE 1046
Cdd:pfam15921 561 DKVIEILRQQIENMTQLVGQhgrTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLE-----LEKV 635
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1047 QQPGNQAQAQAQLASLYSALQQALGSVCESRPELSGggdsapsvwgLEPDQNGARSLFKRGPLLTALSAEAVASALHKLH 1126
Cdd:pfam15921 636 KLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNS----------LSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQ 705
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1127 QDLWKTQQTR----------------------------DVLRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEK 1178
Cdd:pfam15921 706 SELEQTRNTLksmegsdghamkvamgmqkqitakrgqiDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEK 785
|
730 740 750
....*....|....*....|....*....|....*....
gi 2462579258 1179 SKWEGKQNSLESELMELHETMASLQSRLRRAELQRMEAQ 1217
Cdd:pfam15921 786 NKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQ 824
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1141-1778 |
6.90e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 58.23 E-value: 6.90e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1141 DQVQKLEERLTDTEAEKSQVHTELQDLQR-QLSQNQEEKSKWEGKQNSLE-SELMELHETmaslqSRLRRAELQRmEAQG 1218
Cdd:PTZ00121 1137 EDARKAEEARKAEDAKRVEIARKAEDARKaEEARKAEDAKKAEAARKAEEvRKAEELRKA-----EDARKAEAAR-KAEE 1210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1219 ERELLQAAKENLTAQVEHLQAaVVEARAQASAAGILEEDlRTARSALKLKNEEVESERERAQALQEQGELKVAQGKALQE 1298
Cdd:PTZ00121 1211 ERKAEEARKAEDAKKAEAVKK-AEEAKKDAEEAKKAEEE-RNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEE 1288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1299 NLALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELL--SLDLKKRNQEVDLQQE-QIQELEKCRSVLEHLPMAVQE 1375
Cdd:PTZ00121 1289 KKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKkkADAAKKKAEEAKKAAEaAKAEAEAAADEAEAAEEKAEA 1368
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1376 REQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLVTLECLALELEENHHKMECQQKLIKE 1455
Cdd:PTZ00121 1369 AEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADE 1448
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1456 LEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQERDQEVKSQRE---QIEELQRQKEHLTQDLER 1532
Cdd:PTZ00121 1449 AKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEakkKADEAKKAEEAKKADEAK 1528
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1533 RDQELMLQKERIQVLEDQRTRQTKILEEDLEQIKLSLRERGRELTTQRQLMQERAEEGKGPSKAQrgslehMKLILRDKE 1612
Cdd:PTZ00121 1529 KAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEAR------IEEVMKLYE 1602
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1613 KEVECQQEHIHELQELKDQLEQQLQGlhRKVGETSLLLSQREQEIVVLQQQLQEAREQGELKEQSLQSQLDEAQRAlAQR 1692
Cdd:PTZ00121 1603 EEKKMKAEEAKKAEEAKIKAEELKKA--EEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKK-AEE 1679
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1693 DQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKERHGELQDHK---EQARRLEEELAVEGRRVQALEEVLGDL 1769
Cdd:PTZ00121 1680 AKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKikaEEAKKEAEEDKKKAEEAKKDEEEKKKI 1759
|
....*....
gi 2462579258 1770 RAESREQEK 1778
Cdd:PTZ00121 1760 AHLKKEEEK 1768
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
848-1045 |
1.30e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 57.23 E-value: 1.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 848 TQLQEAQRELKEAARQhRDDLAALQEESSSLLQDKMDLQKQvEDLKSQLVAQDDSQRLVEQEvQEKLRETQEYNRIQKEL 927
Cdd:COG4913 235 DDLERAHEALEDAREQ-IELLEPIRELAERYAAARERLAEL-EYLRAALRLWFAQRRLELLE-AELEELRAELARLEAEL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 928 EREKASLTLSLMEKEQRLLVLQEADSIR----QQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLE 1003
Cdd:COG4913 312 ERLEARLDALREELDELEAQIRGNGGDRleqlEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAA 391
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 2462579258 1004 ELEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEALAA 1045
Cdd:COG4913 392 LLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLER 433
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
128-478 |
1.38e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 57.37 E-value: 1.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 128 AKTQELEKEAHERSQELIQLKSQGDL---EKAELQDRVTELSALLTQSQKQNEDYEKMIKALRETVEILETNHTELMEHE 204
Cdd:TIGR02168 684 EKIEELEEKIAELEKALAELRKELEEleeELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEI 763
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 205 ASLSRNAQEEKLSLQQVIKDITQVMveegdniAQGSGHENSLELDSSIFSqfdyqDADKALTLVRSVLTRRRQAVQDLRQ 284
Cdd:TIGR02168 764 EELEERLEEAEEELAEAEAEIEELE-------AQIEQLKEELKALREALD-----ELRAELTLLNEEAANLRERLESLER 831
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 285 QLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEAW 364
Cdd:TIGR02168 832 RIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRS 911
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 365 RLRRVNVELQLQ-GDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESshlegelLRQEQTEV 443
Cdd:TIGR02168 912 ELRRELEELREKlAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKR-------LENKIKEL 984
|
330 340 350
....*....|....*....|....*....|....*
gi 2462579258 444 TAALARAEQSIAELSSSENTLKTEVADLRAAAVKL 478
Cdd:TIGR02168 985 GPVNLAAIEEYEELKERYDFLTAQKEDLTEAKETL 1019
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
270-631 |
1.50e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 57.00 E-value: 1.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 270 SVLTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGErdtlagqTVDLQGEVDSLSKERELLQKAR 349
Cdd:TIGR02169 667 LFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRK-------IGEIEKEIEQLEQEEEKLKERL 739
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 350 EELRQQLEVLEQEAWRLRRVNVEL-----QLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLRE 424
Cdd:TIGR02169 740 EELEEDLSSLEQEIENVKSELKELearieELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQ 819
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 425 ALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQ 504
Cdd:TIGR02169 820 KLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLR 899
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 505 SVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELqADLRDIQEEKEEIQKKLSESRHQQEAAt 584
Cdd:TIGR02169 900 ELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEE-LSLEDVQAELQRVEEEIRALEPVNMLA- 977
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2462579258 585 tqLEQLHQEAKRQEEVlaraVQEKEALVREKAALEVRLQAVERDRQD 631
Cdd:TIGR02169 978 --IQEYEEVLKRLDEL----KEKRAKLEEERKAILERIEEYEKKKRE 1018
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
144-655 |
2.16e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 56.59 E-value: 2.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 144 LIQLKSQ-GDLEKAELQDRVTELSALLTQSQKQNEDYEK--------------MIKALRETVEILETNHTELMEHEASLS 208
Cdd:PRK02224 189 LDQLKAQiEEKEEKDLHERLNGLESELAELDEEIERYEEqreqaretrdeadeVLEEHEERREELETLEAEIEDLRETIA 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 209 rNAQEEKLSLQQVIKDITQVMVEEGDNIAQGSGHENSLELDSSIFSQfDYQDADKALTLVRSVLTRRRQAVQDLRQQLAG 288
Cdd:PRK02224 269 -ETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEA-RREELEDRDEELRDRLEECRVAAQAHNEEAES 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 289 CQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRR 368
Cdd:PRK02224 347 LREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELRE 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 369 VNVELQLQGDSAQGqkeeqqeelhlAVRERERLQEM----LMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVT 444
Cdd:PRK02224 427 REAELEATLRTARE-----------RVEEAEALLEAgkcpECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVE 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 445 AALARAEQSI---AELSSSENTLKT---EVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARN 518
Cdd:PRK02224 496 ERLERAEDLVeaeDRIERLEERREDleeLIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVA 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 519 ALQVDLAEAEKRREALwEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSE--SRHQQEAATTQ---LEQLHQE 593
Cdd:PRK02224 576 ELNSKLAELKERIESL-ERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEkrERKRELEAEFDearIEEARED 654
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462579258 594 AKRQEEVLARAVQEKEALVREKAALEVRLQAVERD---RQDLAEQLQGLSSAKELLESSLFEAQQ 655
Cdd:PRK02224 655 KERAEEYLEQVEEKLDELREERDDLQAEIGAVENEleeLEELRERREALENRVEALEALYDEAEE 719
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
732-1016 |
2.70e-07 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 55.90 E-value: 2.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 732 VNQLREKWEKERSWHQQELAKALESLEREKMELEMrlKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETL 811
Cdd:pfam17380 271 LNQLLHIVQHQKAVSERQQQEKFEKMEQERLRQEK--EEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAMERER 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 812 LQTQKELADASQQLERLRQD---MKVQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQ 888
Cdd:pfam17380 349 ELERIRQEERKRELERIRQEeiaMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAE 428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 889 VEDLKSQLVA--QDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDM 966
Cdd:pfam17380 429 QEEARQREVRrlEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAM 508
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2462579258 967 QEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLE-ELEASHITEQQLR 1016
Cdd:pfam17380 509 IEEERKRKLLEKEMEERQKAIYEEERRREAEEERRKQqEMEERRRIQEQMR 559
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1225-1776 |
4.67e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 55.46 E-value: 4.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1225 AAKENLTAQVEHLQAAVVEARAQASAAGILEEDLRTARSALKLKNEEVESERERAQALQEQGELKVAQGKALQENLALLT 1304
Cdd:PRK03918 186 KRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELE 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1305 QTLAEREEEVETLRGQIQELEKQREMQKAALELlsldlkkrNQEVDLQQEQIQELEKCRSVLEHLPMAVQEREQKLTVQR 1384
Cdd:PRK03918 266 ERIEELKKEIEELEEKVKELKELKEKAEEYIKL--------SEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1385 EQIRELEKDRETQRNVLEhQLLELEKKDQMIESQRGQVQDLKKQLVTLEclaleleenhhkMECQQKLIKELEGQRETQR 1464
Cdd:PRK03918 338 ERLEELKKKLKELEKRLE-ELEERHELYEEAKAKKEELERLKKRLTGLT------------PEKLEKELEELEKAKEEIE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1465 VALTHLTL---DLEERSQELQAQSSQIHDLESHSTVLARELQERDQ---------EVKSQREQIEELQRQKEHLTQDLER 1532
Cdd:PRK03918 405 EEISKITArigELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRkelleeytaELKRIEKELKEIEEKERKLRKELRE 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1533 RDQELMLQKERIQVLEdqRTRQTKILEEDLEQIKLslrERGRELTTQRQLMQERAEEGKGPSKAQRGSLEHMKLILRDKE 1612
Cdd:PRK03918 485 LEKVLKKESELIKLKE--LAEQLKELEEKLKKYNL---EELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLA 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1613 KEVECQQEHIHELQELKDQLE--------------QQLQGLHRKVGETSLL---LSQREQEIVVLQQQLQEAREQGELKE 1675
Cdd:PRK03918 560 ELEKKLDELEEELAELLKELEelgfesveeleerlKELEPFYNEYLELKDAekeLEREEKELKKLEEELDKAFEELAETE 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1676 ---QSLQSQLDEAQRALAQRDqeLEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKERHGELQDHKEQARRLEE-E 1751
Cdd:PRK03918 640 krlEELRKELEELEKKYSEEE--YEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKlE 717
|
570 580
....*....|....*....|....*
gi 2462579258 1752 LAVEgrRVQALEEVLGDLRAESREQ 1776
Cdd:PRK03918 718 KALE--RVEELREKVKKYKALLKER 740
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1120-1571 |
8.75e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 54.26 E-value: 8.75e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1120 SALHKLHQDLWKTQQTRDVLRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEE----KSKWEGKQNSLE---SEL 1192
Cdd:TIGR04523 197 LKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQlnqlKDEQNKIKKQLSekqKEL 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1193 MELHETMASLQSRLR--RAELQRMEAQGERELLQAAKENLTAQVEHLQAAVVEARAQASAAGILEEDLRTARSALK-LKN 1269
Cdd:TIGR04523 277 EQNNKKIKELEKQLNqlKSEISDLNNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTnSES 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1270 EEVESERERAQALQEQGELKVAQGKALQENLALLTQTlAEREEEVETLRGQIQELEKQREMQKAALELLSLDLKKRNQEV 1349
Cdd:TIGR04523 357 ENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQI-NDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETI 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1350 DLQQEQIQELEKCRSVLEhlpMAVQEREQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQL 1429
Cdd:TIGR04523 436 IKNNSEIKDLTNQDSVKE---LIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKV 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1430 VTLECLALELEENHHKMECQ----QKLIKELEGQRETQRVALTHltLDLEERSQELQAQSSQIHD----LESHSTVLARE 1501
Cdd:TIGR04523 513 KDLTKKISSLKEKIEKLESEkkekESKISDLEDELNKDDFELKK--ENLEKEIDEKNKEIEELKQtqksLKKKQEEKQEL 590
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1502 LQERDQEVKSQREQIEELQRQKEHLTQDLERRDQElmlqKERIQVLEDQRTRQTKILEEDLEQIKLSLRE 1571
Cdd:TIGR04523 591 IDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKE----NEKLSSIIKNIKSKKNKLKQEVKQIKETIKE 656
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
737-1393 |
9.10e-07 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 54.46 E-value: 9.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 737 EKWEKERSWHQQELAKaLESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETLLQTQK 816
Cdd:pfam12128 244 TKLQQEFNTLESAELR-LSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRS 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 817 ELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLlqdKMDLQKQVEDLKSQL 896
Cdd:pfam12128 323 ELEALEDQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKI---KEQNNRDIAGIKDKL 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 897 VAQDdsqrlvEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLlvlqeadSIRQQELSALRQDMQEAQGEQKEL 976
Cdd:pfam12128 400 AKIR------EARDRQLAVAEDDLQALESELREQLEAGKLEFNEEEYRL-------KSRLGELKLRLNQATATPELLLQL 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 977 SAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRAsLWAQEAKAAQLQLRLRSTESQLEALAAEQQPGNQAQAQ 1056
Cdd:pfam12128 467 ENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEA-LRQASRRLEERQSALDELELQLFPQAGTLLHFLRKEAP 545
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1057 AQLASLYSALQqalgsvcesrPELSGGGDSAPSVWGLEPdqNGARSLFKRGPLLTALSAEAVASALHKLHQDLWKTQQTR 1136
Cdd:pfam12128 546 DWEQSIGKVIS----------PELLHRTDLDPEVWDGSV--GGELNLYGVKLDLKRIDVPEWAASEEELRERLDKAEEAL 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1137 DVLRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELME-LHETMASLQSRLRR--AELQR 1213
Cdd:pfam12128 614 QSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKaLAERKDSANERLNSleAQLKQ 693
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1214 MEAQGERELLQAAKENLTAQVEHLQAAVVEARAQASAAGILEEDLRTARSALKLKNEEVESERERAQALQEQGELKVAQG 1293
Cdd:pfam12128 694 LDKKHQAWLEEQKEQKREARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKL 773
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1294 KALQENLALLTQTLAEREEEV--------ETLRGQIQELEKQREMQKAALELLSLDLKKRNQEVDLqqeQIQELEKCRSV 1365
Cdd:pfam12128 774 KREIRTLERKIERIAVRRQEVlryfdwyqETWLQRRPRLATQLSNIERAISELQQQLARLIADTKL---RRAKLEMERKA 850
|
650 660
....*....|....*....|....*...
gi 2462579258 1366 LEHLPMAVQEREQKLTVQREQIRELEKD 1393
Cdd:pfam12128 851 SEKQQVRLSENLRGLRCEMSKLATLKED 878
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
272-486 |
1.06e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.23 E-value: 1.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 272 LTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREE 351
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 352 LRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHL 431
Cdd:COG4942 102 QKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLA 181
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2462579258 432 EgelLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALA 486
Cdd:COG4942 182 E---LEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLE 233
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1156-1693 |
1.08e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 53.96 E-value: 1.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1156 EKSQVHTELQD-LQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRLRRaELQRMEAQGERELLQAAKENltAQV 1234
Cdd:pfam05483 180 ETRQVYMDLNNnIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKK-EINDKEKQVSLLLIQITEKE--NKM 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1235 EHLQAAVVEARAQASAagiLEEDLRTARSALKLKNEEVESERERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEV 1314
Cdd:pfam05483 257 KDLTFLLEESRDKANQ---LEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEK 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1315 ETlrgQIQELEKQREMQkaALELLSLDLKKRNQEVDLQQEQiQELEKCRSVLEHLPMAVQEREQKLtvqrEQIRELEKDR 1394
Cdd:pfam05483 334 EA---QMEELNKAKAAH--SFVVTEFEATTCSLEELLRTEQ-QRLEKNEDQLKIITMELQKKSSEL----EEMTKFKNNK 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1395 ETQRNVLEHQLLElekkDQMIESQRGQVQDLKKQLVTLECLALELeenhhkMECQQKLIKELEGQRETQRVALTHLTLDL 1474
Cdd:pfam05483 404 EVELEELKKILAE----DEKLLDEKKQFEKIAEELKGKEQELIFL------LQAREKEIHDLEIQLTAIKTSEEHYLKEV 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1475 EERSQELQAQSSQIHDLESHSTVLARELQERDQEVKsqrEQIEELQRQKEHLTQDleRRDQELMLQKerIQVLEDQRTRq 1554
Cdd:pfam05483 474 EDLKTELEKEKLKNIELTAHCDKLLLENKELTQEAS---DMTLELKKHQEDIINC--KKQEERMLKQ--IENLEEKEMN- 545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1555 tkiLEEDLEQIKLSLRERGRELTTQRQLMQERAEEGKGPSKAQRGSLEHMKLILRDKEKEVECQQEHIHELQELKDQLEQ 1634
Cdd:pfam05483 546 ---LRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKK 622
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462579258 1635 QLQGLHRKVGETSLLLSQREQEIVVLQQQLQEA----REQGELKEQSLQSQLDEAQRALAQRD 1693
Cdd:pfam05483 623 KGSAENKQLNAYEIKVNKLELELASAKQKFEEIidnyQKEIEDKKISEEKLLEEVEKAKAIAD 685
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
691-812 |
1.28e-06 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 53.93 E-value: 1.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 691 ELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQ--QELAKALESLEREKMELEMRL 768
Cdd:COG0542 415 ELERRLEQLEIEKEALKKEQDEASFERLAELRDELAELEEELEALKARWEAEKELIEeiQELKEELEQRYGKIPELEKEL 494
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 2462579258 769 KEQQTEMEAIQAQREEERTQAESA----------LCQMqLETEKERVSLLETLL 812
Cdd:COG0542 495 AELEEELAELAPLLREEVTEEDIAevvsrwtgipVGKL-LEGEREKLLNLEEEL 547
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1449-1692 |
1.31e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.23 E-value: 1.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1449 QQKLIKELEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQERDQEVKSQREQIEELQRQKEHLTQ 1528
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1529 DLERRDQELMLQKERIQVLEDQRTRQTKILEEDLEQIklslrerGRELTTQRQLMQERAEEGKGpskaqrgsLEHMKLIL 1608
Cdd:COG4942 98 ELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDA-------VRRLQYLKYLAPARREQAEE--------LRADLAEL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1609 RDKEKEVECQQEhihELQELKDQLEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQEAREQgelkEQSLQSQLDEAQRA 1688
Cdd:COG4942 163 AALRAELEAERA---ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQE----AEELEALIARLEAE 235
|
....
gi 2462579258 1689 LAQR 1692
Cdd:COG4942 236 AAAA 239
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1268-1780 |
1.35e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 53.87 E-value: 1.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1268 KNEEVESERERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSLDLKKRNQ 1347
Cdd:TIGR04523 31 QDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1348 EVDLQQEQIQELEKCRSVLEHlpmAVQEREQKLTVQREQIRELEKDRE---TQRNVLEHQLLELEKKDQMIESQRGQVQ- 1423
Cdd:TIGR04523 111 EIKNDKEQKNKLEVELNKLEK---QKKENKKNIDKFLTEIKKKEKELEklnNKYNDLKKQKEELENELNLLEKEKLNIQk 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1424 ---DLKKQLVTLECLALELEENHHKMECQQKLIKELEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLAR 1500
Cdd:TIGR04523 188 nidKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKK 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1501 ELQERDQEVKSQREQIEELQRQKEHLTQDLERrdqelmLQKERIQVLedqrtrqTKILEEDLEQIKLSLRERGRELTTQR 1580
Cdd:TIGR04523 268 QLSEKQKELEQNNKKIKELEKQLNQLKSEISD------LNNQKEQDW-------NKELKSELKNQEKKLEEIQNQISQNN 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1581 QLMQERAEEGKGPSKAQRGSLEHMKLI---LRDKEKEVECQQEHIHELQELKDQLEQQLQGLHRKVGETSLLLSQREQEI 1657
Cdd:TIGR04523 335 KIISQLNEQISQLKKELTNSESENSEKqreLEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQI 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1658 VVLQQQLQE-AREQGELKEQ--SLQSQLDEAQRALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKER 1734
Cdd:TIGR04523 415 KKLQQEKELlEKEIERLKETiiKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSK 494
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 2462579258 1735 HGELQDHKEQARRLEEELAVEGRRVQALEEVLGDLRAESREQEKAL 1780
Cdd:TIGR04523 495 EKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKI 540
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
272-859 |
1.42e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.77 E-value: 1.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 272 LTRRRQAVQDLRQQLAGCQEAVNLL-----QQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKER---- 342
Cdd:COG4913 257 IRELAERYAAARERLAELEYLRAALrlwfaQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIrgng 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 343 -ELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELIT 421
Cdd:COG4913 337 gDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRD 416
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 422 LREALESshlegelLRQEqtevtaalaraeqsIAELSSSENTLKTEVADLRAaavklsALNEALALDKVGLN--QQLLQL 499
Cdd:COG4913 417 LRRELRE-------LEAE--------------IASLERRKSNIPARLLALRD------ALAEALGLDEAELPfvGELIEV 469
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 500 EEENQSvcSRMeAAEQA----RNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSE 575
Cdd:COG4913 470 RPEEER--WRG-AIERVlggfALTLLVPPEHYAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDPDSLAGKLDFKPHP 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 576 SRHQQEAATTQ---------LEQLHQEAK-----------------------RQEEVL-ARAVQEKEALVREKAALEVRL 622
Cdd:COG4913 547 FRAWLEAELGRrfdyvcvdsPEELRRHPRaitragqvkgngtrhekddrrriRSRYVLgFDNRAKLAALEAELAELEEEL 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 623 QAVERDRQDLAEQLQGLSSAKELLE--SSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQgevrclklELDTERSQAE 700
Cdd:COG4913 627 AEAEERLEALEAELDALQERREALQrlAEYSWDEIDVASAEREIAELEAELERLDASSDDLA--------ALEEQLEELE 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 701 QERDAAARQLAQAEQEgKTALEQQKAAHEKEVNQLREKWE----KERSWHQQELAKALESLEREKMELEMRlKEQQTEME 776
Cdd:COG4913 699 AELEELEEELDELKGE-IGRLEKELEQAEEELDELQDRLEaaedLARLELRALLEERFAAALGDAVERELR-ENLEERID 776
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 777 AIQAQREEERTQAESALCQMQLETEKERVSL---LETLLQTQKELAD-ASQQLERLRQDMKvQKLKEQETTGI--LQTQL 850
Cdd:COG4913 777 ALRARLNRAEEELERAMRAFNREWPAETADLdadLESLPEYLALLDRlEEDGLPEYEERFK-ELLNENSIEFVadLLSKL 855
|
....*....
gi 2462579258 851 QEAQRELKE 859
Cdd:COG4913 856 RRAIREIKE 864
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1501-2097 |
1.55e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.99 E-value: 1.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1501 ELQERDQEVKSQRE--QIEELQRQKEHLTQDLERRDQELMLQKERIQVLEDQRTRQTKileEDLEQIKLSLRERGRELTT 1578
Cdd:PTZ00121 1179 EAARKAEEVRKAEElrKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAK---KDAEEAKKAEEERNNEEIR 1255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1579 QRQ--LMQERAEEGKGPSKAQRGSLEHMKLILRDKEKEVECQQEHIHELQELKDQLEQQlqglhRKVGETSLLLSQREQE 1656
Cdd:PTZ00121 1256 KFEeaRMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEA-----KKADEAKKKAEEAKKK 1330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1657 IVVLQQQLQEAREQGELKEQSLQSQLDEAQRALAQRDQELEALQQEQQQAQGQEERVKE--KADALQGALEQAHMT---L 1731
Cdd:PTZ00121 1331 ADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEkkKADEAKKKAEEDKKKadeL 1410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1732 KERHGELQDHKEQARRLEEELAVEGRRVQALEEVLGDLRAESREQEKALLALQQQCAEQAQEHEV-----ETRALQDSWL 1806
Cdd:PTZ00121 1411 KKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAkkkaeEAKKADEAKK 1490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1807 QAQAVLKERDQELEALRAESQSSRHQEEAARARAEALQEALGKAHAALQGKEQHLLEQAELSRSLEASTATLQASLDACQ 1886
Cdd:PTZ00121 1491 KAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAK 1570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1887 AHSRQLEEALRIQEGEIQDQDLRYQEDVQQLQQALAQRDEELRHQQE--------REQLLEKSLAQRVQENMIQEKQNLG 1958
Cdd:PTZ00121 1571 KAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEakikaeelKKAEEEKKKVEQLKKKEAEEKKKAE 1650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1959 QEREEEEIRGLHQSVRELQLTLAQKEQEILELRETQQRNNLEALPHSHKTSPMEEQSLKLDSLEPR----LQRELERLQA 2034
Cdd:PTZ00121 1651 ELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKkaeeLKKAEEENKI 1730
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579258 2035 ALRQTEAREIEWREKAQDLAL------SLAQTKASVSSLQEVAMFLQASVLERDSEQQRLQDELELTRR 2097
Cdd:PTZ00121 1731 KAEEAKKEAEEDKKKAEEAKKdeeekkKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKK 1799
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
709-992 |
1.72e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 53.59 E-value: 1.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 709 QLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREK---MELEMRLKEQQTEMeAIQAQREEE 785
Cdd:pfam17380 273 QLLHIVQHQKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARqaeMDRQAAIYAEQERM-AMERERELE 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 786 RTQAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKV---QKLKEQETTGILQTQLQEAQRELKEAAR 862
Cdd:pfam17380 352 RIRQEERKRELERIRQEEIAMEISRMRELERLQMERQQKNERVRQELEAarkVKILEEERQRKIQQQKVEMEQIRAEQEE 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 863 QHRDDLAALQEESSSLL----QDKMDLQKQVEDLKSQ------------------LVAQDDSQRLVEQEVQEKLRETQEY 920
Cdd:pfam17380 432 ARQREVRRLEEERAREMervrLEEQERQQQVERLRQQeeerkrkklelekekrdrKRAEEQRRKILEKELEERKQAMIEE 511
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2462579258 921 NRIQKELEREKASLTLSLMEKEQRLLVLQE-ADSIRQQELSALRQDMQEAQGEQKELSA---QMELLRQEVKEKEA 992
Cdd:pfam17380 512 ERKRKLLEKEMEERQKAIYEEERRREAEEErRKQQEMEERRRIQEQMRKATEERSRLEAmerEREMMRQIVESEKA 587
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
548-777 |
2.35e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.46 E-value: 2.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 548 AEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVER 627
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 628 DRQDLAEQLQGLSSAKELLESS---LFEAQQQNSVIEVTKGQLevqIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERD 704
Cdd:COG4942 98 ELEAQKEELAELLRALYRLGRQpplALLLSPEDFLDAVRRLQY---LKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462579258 705 AAARQLAQAEQEgKTALEQQKAAHEKEVNQLREKwekerswhQQELAKALESLEREKMELEMRLKEQQTEMEA 777
Cdd:COG4942 175 ELEALLAELEEE-RAALEALKAERQKLLARLEKE--------LAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1452-1775 |
2.77e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.15 E-value: 2.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1452 LIKELEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLEshstvlaRELQERDQEVKSQREQIEELQRQKEHLTQDLE 1531
Cdd:TIGR02169 196 KRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALE-------RQKEAIERQLASLEEELEKLTEEISELEKRLE 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1532 RRDQELMLQKERIQVL--EDQRTRQTKI--LEEDLEQIKLSLRERGRELttqrQLMQERAEEGKGPSKAQRGSLEHMKLI 1607
Cdd:TIGR02169 269 EIEQLLEELNKKIKDLgeEEQLRVKEKIgeLEAEIASLERSIAEKEREL----EDAEERLAKLEAEIDKLLAEIEELERE 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1608 LRDKEKEVECQQEHIHELQELKDQLEQQLQGLHRKVGETSLLLSQREQEIvvlqQQLQEAREQGELKEQSLQSQLDEAQR 1687
Cdd:TIGR02169 345 IEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKL----EKLKREINELKRELDRLQEELQRLSE 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1688 ALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKERHGELQDHKEQARRLEEELAVEGRRVQALEEVLG 1767
Cdd:TIGR02169 421 ELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQAR 500
|
....*...
gi 2462579258 1768 DLRAESRE 1775
Cdd:TIGR02169 501 ASEERVRG 508
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
543-876 |
2.89e-06 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 52.21 E-value: 2.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 543 AQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRL 622
Cdd:COG4372 38 FELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEEL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 623 QAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIqgevrclkleLDTERSQAEQE 702
Cdd:COG4372 118 EELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQAL----------SEAEAEQALDE 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 703 RDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQR 782
Cdd:COG4372 188 LLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAI 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 783 EEERTQAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAAR 862
Cdd:COG4372 268 LVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLL 347
|
330
....*....|....
gi 2462579258 863 QHRDDLAALQEESS 876
Cdd:COG4372 348 VGLLDNDVLELLSK 361
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1513-1868 |
3.80e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 52.37 E-value: 3.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1513 REQIEELQRQKEHLTQDLERRDQELMLQKERIQVLEDQRTRQTKILEedleqIKLSLRERGRELTTQRQlmqERAEEGKG 1592
Cdd:TIGR02168 171 KERRKETERKLERTRENLDRLEDILNELERQLKSLERQAEKAERYKE-----LKAELRELELALLVLRL---EELREELE 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1593 PSKAQRGSLEHMKLILRDKEKEVECQ-QEHIHELQELKDQLEQQLQGLHRKVGETSLLlSQREQEIVVLQQQLQEAREQG 1671
Cdd:TIGR02168 243 ELQEELKEAEEELEELTAELQELEEKlEELRLEVSELEEEIEELQKELYALANEISRL-EQQKQILRERLANLERQLEEL 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1672 ELKEQSLQSQLDEAQRALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKERHGELQDHKEQARRLEEE 1751
Cdd:TIGR02168 322 EAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNE 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1752 LAVEGRRVQALEEVLGDLRAESREQEKALLALQQQCAEQA-QEHEVETRALQDSWLQAQAVLKERDQELEALRAESQSSR 1830
Cdd:TIGR02168 402 IERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAElEELEEELEELQEELERLEEALEELREELEEAEQALDAAE 481
|
330 340 350
....*....|....*....|....*....|....*...
gi 2462579258 1831 HQEEAARARAEALQEALGKAHAALQGKEQHLLEQAELS 1868
Cdd:TIGR02168 482 RELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLS 519
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
847-1046 |
4.18e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.69 E-value: 4.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 847 QTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKE 926
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 927 LEREKASL--TLSLMEKEQRLLVLQEADSIRQ---------QELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADfL 995
Cdd:COG4942 102 QKEELAELlrALYRLGRQPPLALLLSPEDFLDavrrlqylkYLAPARREQAEELRADLAELAALRAELEAERAELEAL-L 180
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2462579258 996 AQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEALAAE 1046
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
447-979 |
4.61e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 51.94 E-value: 4.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 447 LARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAE 526
Cdd:TIGR04523 126 LNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSN 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 527 AEKRREalweKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSEsrhqqeaATTQLEQLHQEAKRQEEVLARAVQ 606
Cdd:TIGR04523 206 LKKKIQ----KNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISN-------TQTQLNQLKDEQNKIKKQLSEKQK 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 607 EKEALVREKAALEVRLQAVERDRQDLAEQLQglssaKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQgevr 686
Cdd:TIGR04523 275 ELEQNNKKIKELEKQLNQLKSEISDLNNQKE-----QDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQIS---- 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 687 clklELDTERSQAEQERDAAARQLAQAEQEGKTaLEQQKAAHEKEVNQLREKwekerswhQQELAKALESLEREKMELEM 766
Cdd:TIGR04523 346 ----QLKKELTNSESENSEKQRELEEKQNEIEK-LKKENQSYKQEIKNLESQ--------INDLESKIQNQEKLNQQKDE 412
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 767 RLKEQQTEMEAIQaqREEERTQAESALCQMQLETEKERVSLLETLLqtqKELADASQQLERLRQDMKVQKLKEQETTGIL 846
Cdd:TIGR04523 413 QIKKLQQEKELLE--KEIERLKETIIKNNSEIKDLTNQDSVKELII---KNLDNTRESLETQLKVLSRSINKIKQNLEQK 487
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 847 QTQLQEAQRELKEAARQHRD---DLAALQEESSSLLQ-------DKMDLQKQVEDLKSQLVAQDD--SQRLVEQEVQEKL 914
Cdd:TIGR04523 488 QKELKSKEKELKKLNEEKKEleeKVKDLTKKISSLKEkieklesEKKEKESKISDLEDELNKDDFelKKENLEKEIDEKN 567
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462579258 915 RETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQ 979
Cdd:TIGR04523 568 KEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSI 632
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1139-1733 |
4.73e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 51.94 E-value: 4.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1139 LRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRLRRAELQRMEAQG 1218
Cdd:TIGR04523 122 LEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLEL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1219 ERELLQAAKEN---LTAQVEHLQAAVVEaraqasaagiLEEDLRTARSALKLKNEEVESERERAQALQEQGELKVAQGKA 1295
Cdd:TIGR04523 202 LLSNLKKKIQKnksLESQISELKKQNNQ----------LKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSE 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1296 LQENLALLTQTLAEREEEVETLRGQIQELEKQREmqkaalELLSLDLKKrnqEVDLQQEQIQELEKcrsvlehlpmAVQE 1375
Cdd:TIGR04523 272 KQKELEQNNKKIKELEKQLNQLKSEISDLNNQKE------QDWNKELKS---ELKNQEKKLEEIQN----------QISQ 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1376 REQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLVTLECLALELEEnhhKMECQQKLIKE 1455
Cdd:TIGR04523 333 NNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLES---KIQNQEKLNQQ 409
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1456 LEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQERDQEVKSQREQIEELQRQKEHLTQDLERRDQ 1535
Cdd:TIGR04523 410 KDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQK 489
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1536 ELMLQKERIQVLedqrTRQTKILEEDLEQIKlslRERGRELTTQRQLMQERAEegkgpskaqrgslehMKLILRDKEKEV 1615
Cdd:TIGR04523 490 ELKSKEKELKKL----NEEKKELEEKVKDLT---KKISSLKEKIEKLESEKKE---------------KESKISDLEDEL 547
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1616 ECQQEHIHelqelKDQLEQQLQGLHRKVGEtsllLSQREQEIVVLQQQLQEAREQGELKEQSLQSQLDEAQRALAQRDQE 1695
Cdd:TIGR04523 548 NKDDFELK-----KENLEKEIDEKNKEIEE----LKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKE 618
|
570 580 590
....*....|....*....|....*....|....*...
gi 2462579258 1696 LEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKE 1733
Cdd:TIGR04523 619 LEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKE 656
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
401-913 |
4.76e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 52.36 E-value: 4.76e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 401 LQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENtLKTEVADLRAAAVKLSA 480
Cdd:TIGR00606 575 LEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQD-EESDLERLKEEIEKSSK 653
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 481 LNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLR 560
Cdd:TIGR00606 654 QRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAP 733
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 561 DIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEAL------VREKAALEVRLQAVERDRQDLAE 634
Cdd:TIGR00606 734 GRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAkvcltdVTIMERFQMELKDVERKIAQQAA 813
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 635 QLQGLSSAKELLESSLFEAQQQNSVIEVTKgqlevQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAE 714
Cdd:TIGR00606 814 KLQGSDLDRTVQQVNQEKQEKQHELDTVVS-----KIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEE 888
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 715 QEGKTALEQQKAAHE-KEVNQLREKWEKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESAL 793
Cdd:TIGR00606 889 QLVELSTEVQSLIREiKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGK 968
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 794 CQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQK-----LKEQETTGILQTQLQEAQRELKEAARQHRDDL 868
Cdd:TIGR00606 969 DDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKiqerwLQDNLTLRKRENELKEVEEELKQHLKEMGQMQ 1048
|
490 500 510 520
....*....|....*....|....*....|....*....|....*.
gi 2462579258 869 AALQEESSSLLQDKMDLQKQVEDLK-SQLVAQDDSQRLVEQEVQEK 913
Cdd:TIGR00606 1049 VLQMKQEHQKLEENIDLIKRNHVLAlGRQKGYEKEIKHFKKELREP 1094
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
295-997 |
5.59e-06 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 51.90 E-value: 5.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 295 LLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQ 374
Cdd:pfam02463 304 KLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLES 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 375 LQGDSAQGQKEEQQEELHLAVRE-------RERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAAL 447
Cdd:pfam02463 384 ERLSSAAKLKEEELELKSEEEKEaqlllelARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKD 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 448 ARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEA 527
Cdd:pfam02463 464 ELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKV 543
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 528 EKRRE--ALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAV 605
Cdd:pfam02463 544 AISTAviVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAK 623
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 606 QEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEV 685
Cdd:pfam02463 624 VVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKK 703
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 686 RCLKLELDTER-SQAEQERDAAARQLAQAEQEGKTALEQQK--AAHEKEVNQLREKWEKERSWHQQELAKALESLEREKM 762
Cdd:pfam02463 704 KEQREKEELKKlKLEAEELLADRVQEAQDKINEELKLLKQKidEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKT 783
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 763 ELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQET 842
Cdd:pfam02463 784 EKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEI 863
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 843 TGILQTQlQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNR 922
Cdd:pfam02463 864 TKEELLQ-ELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLL 942
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462579258 923 IQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQ 997
Cdd:pfam02463 943 EEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQ 1017
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1273-2103 |
6.39e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.61 E-value: 6.39e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1273 ESERERAQALQEQGELKvaqgkalqENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSLDLKKRNQEVDLQ 1352
Cdd:TIGR02169 167 EFDRKKEKALEELEEVE--------ENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQ 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1353 QEQIQ-ELEKCRSVLEHLPMAVQEREQKLTVQREQIREL----EKDRETQRNVLEHQLLELEKKdqmIESQRGQVQDLKK 1427
Cdd:TIGR02169 239 KEAIErQLASLEEELEKLTEEISELEKRLEEIEQLLEELnkkiKDLGEEEQLRVKEKIGELEAE---IASLERSIAEKER 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1428 QLVTLECLALELEENHHKMECQqklIKELEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQERDQ 1507
Cdd:TIGR02169 316 ELEDAEERLAKLEAEIDKLLAE---IEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYRE 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1508 EVKSQREQIEELQRQKEHLTQDLERRDQELMLQKERIQVLEDQRTRqtkiLEEDLEQIKLSLRERGRELTTQRQLMQERA 1587
Cdd:TIGR02169 393 KLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINE----LEEEKEDKALEIKKQEWKLEQLAADLSKYE 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1588 EEgkgpskaqrgslehmkliLRDKEKEVECQQEHIHELQELKDQLEQQLQGLHRKVGE---TSLLLSQREQEIVVLQQQL 1664
Cdd:TIGR02169 469 QE------------------LYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGgraVEEVLKASIQGVHGTVAQL 530
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1665 QEAREQGELK-EQSLQSQLD--------EAQRALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQAhMTLKE-- 1733
Cdd:TIGR02169 531 GSVGERYATAiEVAAGNRLNnvvveddaVAKEAIELLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFA-VDLVEfd 609
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1734 -----------RHGELQDHKEQARR---------LEEEL----------AVEGRRVQALEEVLGDLRAESREQEKALLAL 1783
Cdd:TIGR02169 610 pkyepafkyvfGDTLVVEDIEAARRlmgkyrmvtLEGELfeksgamtggSRAPRGGILFSRSEPAELQRLRERLEGLKRE 689
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1784 QQQCAEQAQEHEVETRALQDSWLQAQAVLKERDQELEALRAESQSSRHQEEAARARAEALQEALGKAHAALQGKEQHLLE 1863
Cdd:TIGR02169 690 LSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEE 769
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1864 QAELSRSLEASTATLQASLDacQAHSRQLEEALRIQEGEIQDQDLRYQEdvqqlqqalaqRDEELRHQQEREQLLEKSLA 1943
Cdd:TIGR02169 770 LEEDLHKLEEALNDLEARLS--HSRIPEIQAELSKLEEEVSRIEARLRE-----------IEQKLNRLTLEKEYLEKEIQ 836
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1944 QRVQENMIQEKQNLGQEREEEEIRGlhqSVRELQLTLAQKEQEILELRE-----TQQRNNLEAlPHSHKTSPMEEQSLKL 2018
Cdd:TIGR02169 837 ELQEQRIDLKEQIKSIEKEIENLNG---KKEELEEELEELEAALRDLESrlgdlKKERDELEA-QLRELERKIEELEAQI 912
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 2019 DSLEPRLQRELERLQAALRQTEAREIEWRE---------KAQDLALSLAQTKASVSSLQEVAMflqASVLERDSEQQRLq 2089
Cdd:TIGR02169 913 EKKRKRLSELKAKLEALEEELSEIEDPKGEdeeipeeelSLEDVQAELQRVEEEIRALEPVNM---LAIQEYEEVLKRL- 988
|
890
....*....|....
gi 2462579258 2090 DELELTRRALEKER 2103
Cdd:TIGR02169 989 DELKEKRAKLEEER 1002
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1116-1537 |
6.54e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 51.58 E-value: 6.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1116 EAVASALHKLHQDLWKTQQTRDVLRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNqeekskwegkqnslESELMEL 1195
Cdd:PRK02224 324 EELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDR--------------REEIEEL 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1196 HETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVEHLQAavvearaqasaagileeDLRTARSALklkneevese 1275
Cdd:PRK02224 390 EEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEA-----------------TLRTARERV---------- 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1276 rERAQALQEQGELKVAqGKALQEnlALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSlDLKKRNQEVDLQQEQ 1355
Cdd:PRK02224 443 -EEAEALLEAGKCPEC-GQPVEG--SPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAE-DLVEAEDRIERLEER 517
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1356 IQELEKcrsVLEHLPMAVQEREQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLvtlecl 1435
Cdd:PRK02224 518 REDLEE---LIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERI------ 588
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1436 aleleENHHKMECQQKLIKELEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLEShstvlarELQE-RDQEVKSQRE 1514
Cdd:PRK02224 589 -----ESLERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEA-------EFDEaRIEEAREDKE 656
|
410 420
....*....|....*....|...
gi 2462579258 1515 QIEELQRQKEHLTQDLERRDQEL 1537
Cdd:PRK02224 657 RAEEYLEQVEEKLDELREERDDL 679
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1122-1782 |
6.94e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.45 E-value: 6.94e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1122 LHKLHQDLWKTQQTRDVLR------DQVQKLEERLTDTEAEKSQVhtELQDLQRQLSQNQEEKSKWEGKQNSLESELMEL 1195
Cdd:COG4913 237 LERAHEALEDAREQIELLEpirelaERYAAARERLAELEYLRAAL--RLWFAQRRLELLEAELEELRAELARLEAELERL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1196 HETMASLQSRLRRAELQRMEAQGERellqaaKENLTAQVEHLQAavvEARAQASAAGILEEDLRTARSALKLKNEEVESE 1275
Cdd:COG4913 315 EARLDALREELDELEAQIRGNGGDR------LEQLEREIERLER---ELEERERRRARLEALLAALGLPLPASAEEFAAL 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1276 RERAQALQEQGElkvAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQR----EMQKAALELLSLDLKKRNQEVDL 1351
Cdd:COG4913 386 RAEAAALLEALE---EELEALEEALAEAEAALRDLRRELRELEAEIASLERRKsnipARLLALRDALAEALGLDEAELPF 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1352 QQEQIQELEKCRS-------VL-----------EHLPMA---VQEREQKLTVQREQIRELEKDRETQRnVLEHQLLElek 1410
Cdd:COG4913 463 VGELIEVRPEEERwrgaierVLggfaltllvppEHYAAAlrwVNRLHLRGRLVYERVRTGLPDPERPR-LDPDSLAG--- 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1411 kdqMIESQRGQVQDLKKQLVtleclalELEENHHKMECQQKLikelegqRETQRvALThltldleersqeLQAQSSQIHD 1490
Cdd:COG4913 539 ---KLDFKPHPFRAWLEAEL-------GRRFDYVCVDSPEEL-------RRHPR-AIT------------RAGQVKGNGT 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1491 LESHSTvlARELQERDQEVKSQREQIEELQRQKEHLTQDLERRDQELMLQKERIQVLEDQRTRQTKILEEDLEQIKLSLR 1570
Cdd:COG4913 589 RHEKDD--RRRIRSRYVLGFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASA 666
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1571 ERGRelttqRQLMQERAEegkgpskaqrgslehmkliLRDKEKEVECQQEHIHELQELKDQLEQQLQGLHRKVGETslll 1650
Cdd:COG4913 667 EREI-----AELEAELER-------------------LDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRL---- 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1651 sqrEQEIVVLQQQLQEAREQ----GELKEQSLQSQLDEAQRALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQ 1726
Cdd:COG4913 719 ---EKELEQAEEELDELQDRleaaEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRA 795
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*..
gi 2462579258 1727 AHMTLKERHGELQDHKEQARRLEEELA-VEGRRVQALEEVLGDLRAESREQEKALLA 1782
Cdd:COG4913 796 FNREWPAETADLDADLESLPEYLALLDrLEEDGLPEYEERFKELLNENSIEFVADLL 852
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
493-922 |
7.46e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 51.31 E-value: 7.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 493 NQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREA--LWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQ 570
Cdd:COG4717 87 EEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLlpLYQELEALEAELAELPERLEELEERLEELRELEEELE 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 571 KKLSESRHQQEAATTQLEQL----HQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELL 646
Cdd:COG4717 167 ELEAELAELQEELEELLEQLslatEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLK 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 647 E-SSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQ---AEQEGKTALE 722
Cdd:COG4717 247 EaRLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALeelEEEELEELLA 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 723 QQKAAHEKEVNQLREKWEKERSWhqQELAKALESLEREkMELEMRLKEQQTEMEAIQAQREEERTQAesalcqmqLETEK 802
Cdd:COG4717 327 ALGLPPDLSPEELLELLDRIEEL--QELLREAEELEEE-LQLEELEQEIAALLAEAGVEDEEELRAA--------LEQAE 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 803 ERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETTgiLQTQLQEAQRELKEAARQHRDDLAALQE-ESSSLLQD 881
Cdd:COG4717 396 EYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEE--LEEELEELEEELEELREELAELEAELEQlEEDGELAE 473
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 2462579258 882 KMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNR 922
Cdd:COG4717 474 LLQELEELKAELRELAEEWAALKLALELLEEAREEYREERL 514
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
330-873 |
7.81e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.45 E-value: 7.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 330 DLQGEVDSLSKERELLQKAREElRQQLEVLEQEAWRLRRVNVELQ-LQGDSAQGQKEEQQEELHLAVRERERLQEMLMGL 408
Cdd:COG4913 229 ALVEHFDDLERAHEALEDAREQ-IELLEPIRELAERYAAARERLAeLEYLRAALRLWFAQRRLELLEAELEELRAELARL 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 409 EAKQSESLSELITLREALEsshlegELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAavkLSALNEALALD 488
Cdd:COG4913 308 EAELERLEARLDALREELD------ELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEAL---LAALGLPLPAS 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 489 KVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQL----QKAEEAGAELQADLRDIQE 564
Cdd:COG4913 379 AEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKsnipARLLALRDALAEALGLDEA 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 565 E----KEEIQKKLSESR--------------------HQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEV 620
Cdd:COG4913 459 ElpfvGELIEVRPEEERwrgaiervlggfaltllvppEHYAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDPDSLAG 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 621 RLQAVERDRQDLAEQLQGLSSAKELLESslfEAQQQNSVIEVTK-GQL-------EVQIQTVTQAKEVIQGEVRCLKLEL 692
Cdd:COG4913 539 KLDFKPHPFRAWLEAELGRRFDYVCVDS---PEELRRHPRAITRaGQVkgngtrhEKDDRRRIRSRYVLGFDNRAKLAAL 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 693 DTERSQAEQERDAAARQLAQAEQEGKTALEQQKA---------------AHEKEVNQLREKWEKERSWHQ--QELAKALE 755
Cdd:COG4913 616 EAELAELEEELAEAEERLEALEAELDALQERREAlqrlaeyswdeidvaSAEREIAELEAELERLDASSDdlAALEEQLE 695
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 756 SLEREKMELEMRLKEQQTEMEAIQAQR---EEERTQAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDM 832
Cdd:COG4913 696 ELEAELEELEEELDELKGEIGRLEKELeqaEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERI 775
|
570 580 590 600
....*....|....*....|....*....|....*....|.
gi 2462579258 833 KVQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQE 873
Cdd:COG4913 776 DALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPE 816
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1127-1461 |
8.17e-06 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 50.67 E-value: 8.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1127 QDLWKTQQTRDVLRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRL 1206
Cdd:COG4372 31 EQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEA 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1207 RRAELQRMEAQGERELLQAAKENLTAQVEHLQAAVVEARAQAsaagileEDLRTARSALKLKNEEVESERERAQALQEQG 1286
Cdd:COG4372 111 EELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEEL-------KELEEQLESLQEELAALEQELQALSEAEAEQ 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1287 ELKVAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSLDLKKRNQEVDLQQEQIQELEKCRSVL 1366
Cdd:COG4372 184 ALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEEL 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1367 EHLPMAVQEREQ-KLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLVTLECLALELEENHHK 1445
Cdd:COG4372 264 ELAILVEKDTEEeELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLL 343
|
330
....*....|....*.
gi 2462579258 1446 MECQQKLIKELEGQRE 1461
Cdd:COG4372 344 QLLLVGLLDNDVLELL 359
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
717-1503 |
9.58e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 51.27 E-value: 9.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 717 GKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLerekMELEMRLKEQQTEMEAIQAQREEERTQAESALCQM 796
Cdd:pfam15921 72 GKEHIERVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQSV----IDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQL 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 797 QletekERVSLLETLLQTQKE-LADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEES 875
Cdd:pfam15921 148 Q-----NTVHELEAAKCLKEDmLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTMHFRSLGSAI 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 876 SSLLQdkmDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRetqeynriqkelerekasltLSLMEKEQRllvLQEADSIR 955
Cdd:pfam15921 223 SKILR---ELDTEISYLKGRIFPVEDQLEALKSESQNKIE--------------------LLLQQHQDR---IEQLISEH 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 956 QQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQeaqlLEELEAshiTEQQLRASLwaQEAKaAQLQLRLRS 1035
Cdd:pfam15921 277 EVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQ----LSDLES---TVSQLRSEL--REAK-RMYEDKIEE 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1036 TESQLEALAAEQQPGNQAQAQAQLAS--LYSALQQALGSVCESRPELSGGGDSAPSVWGLEPDQNGARSLFKR------- 1106
Cdd:pfam15921 347 LEKQLVLANSELTEARTERDQFSQESgnLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRelddrnm 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1107 -----GPLLTALSAEAVAS-------------ALHKLHQDLWKTQQTRDVLRDQVQKLEER---LTDTEAEKSQVHTELQ 1165
Cdd:pfam15921 427 evqrlEALLKAMKSECQGQmerqmaaiqgkneSLEKVSSLTAQLESTKEMLRKVVEELTAKkmtLESSERTVSDLTASLQ 506
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1166 DLQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVEHLQAAVVEAR 1245
Cdd:pfam15921 507 EKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAG 586
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1246 AQASAAGILEEDLRTARSALK----LKNEEVESERERAQALQEQGELKVAQGKALQENLALLTQTLAEREE---EVETLR 1318
Cdd:pfam15921 587 AMQVEKAQLEKEINDRRLELQefkiLKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQllnEVKTSR 666
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1319 GQIQELEKQREMQKAALELLSLDLKKRNQEVDLQQEQIQ-ELEKCRSVLE-------HLPMAVQEREQKLTVQREQIREL 1390
Cdd:pfam15921 667 NELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQsELEQTRNTLKsmegsdgHAMKVAMGMQKQITAKRGQIDAL 746
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1391 ekdrETQRNVLEHQLLELEKKDQMIESQRGQvqdLKKQLVTLECLALELEENHHKMECQQKLIKELEGQREtqrVALTHL 1470
Cdd:pfam15921 747 ----QSKIQFLEEAMTNANKEKHFLKEEKNK---LSQELSTVATEKNKMAGELEVLRSQERRLKEKVANME---VALDKA 816
|
810 820 830
....*....|....*....|....*....|...
gi 2462579258 1471 TLDLEERSQELQAQSSQIHDLESHSTVLARELQ 1503
Cdd:pfam15921 817 SLQFAECQDIIQRQEQESVRLKLQHTLDVKELQ 849
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
813-1066 |
1.43e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.76 E-value: 1.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 813 QTQKELADASQQLERLRQDMKVQKLKEQEttgiLQTQLQEAQRELKEAARQhrddLAALQEESSSLLQDKMDLQKQVEDL 892
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKA----LLKQLAALERRIAALARR----IRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 893 KSQLVAQddsqrlvEQEVQEKLRETQEYNRIQKELEREKASltlSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGE 972
Cdd:COG4942 96 RAELEAQ-------KEELAELLRALYRLGRQPPLALLLSPE---DFLDAVRRLQYLKYLAPARREQAEELRADLAELAAL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 973 QKELSAQMELLRQEVKEKEAdflaQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEALAAEQQPGNQ 1052
Cdd:COG4942 166 RAELEAERAELEALLAELEE----ERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
250
....*....|....
gi 2462579258 1053 AQAQAQLASLYSAL 1066
Cdd:COG4942 242 RTPAAGFAALKGKL 255
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1712-2128 |
1.52e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 50.72 E-value: 1.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1712 RVKEKADALQGALEQAHMTLKERHGELQDHKEQARRLEEElavegrrVQALEEVLGDLRAESREQekallalqqqcaeqa 1791
Cdd:COG3096 351 RYQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEE-------VDSLKSQLADYQQALDVQ--------------- 408
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1792 qehevETRALQdsWLQAQAVLkERDQELEALRAESqssrhqeeaararaealQEALGKAHAALQGKEQhlleqaelsrSL 1871
Cdd:COG3096 409 -----QTRAIQ--YQQAVQAL-EKARALCGLPDLT-----------------PENAEDYLAAFRAKEQ----------QA 453
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1872 EASTATLQASLDACQAHSRQLEEALRIQEGEIQDQDlryQEDVQQLQQALAQRDEELRHQQEREQLLEKSLAQRVQENMI 1951
Cdd:COG3096 454 TEEVLELEQKLSVADAARRQFEKAYELVCKIAGEVE---RSQAWQTARELLRRYRSQQALAQRLQQLRAQLAELEQRLRQ 530
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1952 QEKQNLGQEREEEEIRGLHQSVRELQLTLAQKEQEILELrETQQRNNLEALphshktspmeeqslkldslePRLQRELER 2031
Cdd:COG3096 531 QQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEEL-EEQAAEAVEQR--------------------SELRQQLEQ 589
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 2032 LQAALRQTEAREIEWREKAQDLALSLAQTKASVSSLQEVAMFLQaSVLERDSEQQRLQDELELTRRALEK--ERLHSPGA 2109
Cdd:COG3096 590 LRARIKELAARAPAWLAAQDALERLREQSGEALADSQEVTAAMQ-QLLEREREATVERDELAARKQALESqiERLSQPGG 668
|
410 420
....*....|....*....|.
gi 2462579258 2110 TSTAELGSRGEQ--GVQLGEV 2128
Cdd:COG3096 669 AEDPRLLALAERlgGVLLSEI 689
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
478-708 |
1.67e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.76 E-value: 1.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 478 LSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQA 557
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 558 DLRDIQEEKEEIQKKLSE--------SRHQQEAATTQLEQLHQEAKRQE---EVLARAVQEKEALVREKAALEVRLQAVE 626
Cdd:COG4942 91 EIAELRAELEAQKEELAEllralyrlGRQPPLALLLSPEDFLDAVRRLQylkYLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 627 RDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAA 706
Cdd:COG4942 171 AERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAA 250
|
..
gi 2462579258 707 AR 708
Cdd:COG4942 251 LK 252
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
246-991 |
1.93e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 50.05 E-value: 1.93e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 246 LELDSSIFSQFDYQDADKALTLVRSVLTRRRQAVQdlrQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQ----KLTGER 321
Cdd:TIGR00606 377 LELDGFERGPFSERQIKNFHTLVIERQEDEAKTAA---QLCADLQSKERLKQEQADEIRDEKKGLGRTIElkkeILEKKQ 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 322 DTLAGQTVDLQGEVDSLSKERELLQKAREELRQqLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERL 401
Cdd:TIGR00606 454 EELKFVIKELQQLEGSSDRILELDQELRKAERE-LSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTT 532
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 402 QEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTaalaraEQSIAELSSSENTLKTEVADLRAAAVKLSAL 481
Cdd:TIGR00606 533 TRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQL------EDWLHSKSKEINQTRDRLAKLNKELASLEQN 606
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 482 NEALALDKVGLNQQLLQLEEENQSVCSrMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRD 561
Cdd:TIGR00606 607 KNHINNELESKEEQLSSYEDKLFDVCG-SQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQR 685
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 562 IQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEevlaravQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSS 641
Cdd:TIGR00606 686 VFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKE-------KRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNR 758
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 642 AKELLESSLFEAQQQNSVIeVTKGQLEVQIQTVTQAKEVIQGEVRclklelDTERSQAEQERDAAARQLAQAEQEGKTAL 721
Cdd:TIGR00606 759 DIQRLKNDIEEQETLLGTI-MPEEESAKVCLTDVTIMERFQMELK------DVERKIAQQAAKLQGSDLDRTVQQVNQEK 831
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 722 EQQKAAHEKEVNQLRE--KWEKERSWHQQELAKALESLEREKMELEMRLKEQQtemeAIQAQREEERTQAESalCQMQLE 799
Cdd:TIGR00606 832 QEKQHELDTVVSKIELnrKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQ----QFEEQLVELSTEVQS--LIREIK 905
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 800 TEKERVSLLETLL---QTQKELADASQQLERLRQDMKVQKLKEQ--ETTGILQTQLQEAQRELKEAARQHRDDLAALQEE 874
Cdd:TIGR00606 906 DAKEQDSPLETFLekdQQEKEELISSKETSNKKAQDKVNDIKEKvkNIHGYMKDIENKIQDGKDDYLKQKETELNTVNAQ 985
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 875 ssslLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIqKELEREKASLTLSLmeKEQRLLVLQEADSI 954
Cdd:TIGR00606 986 ----LEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENEL-KEVEEELKQHLKEM--GQMQVLQMKQEHQK 1058
|
730 740 750
....*....|....*....|....*....|....*..
gi 2462579258 955 RQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKE 991
Cdd:TIGR00606 1059 LEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQ 1095
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1114-1750 |
1.97e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 49.97 E-value: 1.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1114 SAEAVASALHKLHQDLWKTQQTRDVLRDQVQKLEERLTdTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELM 1193
Cdd:TIGR00618 220 RKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLK-KQQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAH 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1194 ELHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVEHLQAAVVEARAQASAAGILEEDLRTARSALKLKNEEVE 1273
Cdd:TIGR00618 299 IKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLT 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1274 SERERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSLDLKKRNQEVDLQQ 1353
Cdd:TIGR00618 379 QHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEK 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1354 EQIQELEKCRSVLEHLPMAVQEREQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLVTLE 1433
Cdd:TIGR00618 459 IHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYA 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1434 CLALELEENHHKMECQQKLIKELEGQRETQRVALTHLTldleersQELQAQSSQIHDLESHSTVLARELQERDQEVKSQR 1513
Cdd:TIGR00618 539 QLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILT-------QCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLA 611
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1514 EQIEELQRQKEHLTQDLERRDQELMLQKERIQVLEDQRTRQTKILEEDLEQIKLSLRERGRELTTQRQLMQERAEEGKGP 1593
Cdd:TIGR00618 612 CEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQ 691
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1594 SKAQRGSLEHMKLILRDKEKEVECQQEHIHELQE----LKDQLEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQE--- 1666
Cdd:TIGR00618 692 LTYWKEMLAQCQTLLRELETHIEEYDREFNEIENasssLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEevt 771
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1667 AREQGELKEQSLQSQLDEAQRALAQRDQELEALQQEQQQAQGQEERVKEKAD-ALQGALEQAHMTLKERHGELQDHKEQA 1745
Cdd:TIGR00618 772 AALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCeTLVQEEEQFLSRLEEKSATLGEITHQL 851
|
....*
gi 2462579258 1746 RRLEE 1750
Cdd:TIGR00618 852 LKYEE 856
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
752-1616 |
2.26e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 50.05 E-value: 2.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 752 KALESLEREKMELEMRLKEQQTEMEAIQAQRE---EERTQAESALCQMQLETE--KERVSLLETLLQTQKELADASQQLE 826
Cdd:TIGR00606 186 KALETLRQVRQTQGQKVQEHQMELKYLKQYKEkacEIRDQITSKEAQLESSREivKSYENELDPLKNRLKEIEHNLSKIM 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 827 RLRQDMKVQKLKEQETTGiLQTQLQEAQRELKEAARQHRDDLAAL-QEESSSLLQDKMDLQKQVEDL--KSQLVAQDDSQ 903
Cdd:TIGR00606 266 KLDNEIKALKSRKKQMEK-DNSELELKMEKVFQGTDEQLNDLYHNhQRTVREKERELVDCQRELEKLnkERRLLNQEKTE 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 904 RLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADS-----IRQQELSALRQDMQEAQGEQKELSA 978
Cdd:TIGR00606 345 LLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNfhtlvIERQEDEAKTAAQLCADLQSKERLK 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 979 QMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRA-SLWAQEAKAAQLQLRLRSTESQLEALAAEQQPGNQAQAQA 1057
Cdd:TIGR00606 425 QEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELqQLEGSSDRILELDQELRKAERELSKAEKNSLTETLKKEVK 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1058 QLASLYSALQQALGSVCESRPELSGGGDSAPSVWGLEPDQNGARSLFKRGPLLTALSAEAVASAL---HKLHQDLWKTQQ 1134
Cdd:TIGR00606 505 SLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFpnkKQLEDWLHSKSK 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1135 TRDVLRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQnSLESELMELHETMAslQSRLRRAELQRM 1214
Cdd:TIGR00606 585 EINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQ-DEESDLERLKEEIE--KSSKQRAMLAGA 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1215 EAQGERELLQAAKEN-----LTAQVEHLQAAVVEARAQASAAGILEED-LRTARSALKLKNEEVESERERAQALQEQGEL 1288
Cdd:TIGR00606 662 TAVYSQFITQLTDENqsccpVCQRVFQTEAELQEFISDLQSKLRLAPDkLKSTESELKKKEKRRDEMLGLAPGRQSIIDL 741
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1289 KVAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAAL------ELLSLDLKKRNQEVDLQQEQIQELEKC 1362
Cdd:TIGR00606 742 KEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLtdvtimERFQMELKDVERKIAQQAAKLQGSDLD 821
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1363 RSV--LEHLPMAVQEREQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLVTLECLALELE 1440
Cdd:TIGR00606 822 RTVqqVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLI 901
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1441 ENHHKMECQQKLIKELEGQRETQRVALTHLTLDLEERSQ-ELQAQSSQIHDLESHSTVLARELQERDQEVKSQRE----- 1514
Cdd:TIGR00606 902 REIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQdKVNDIKEKVKNIHGYMKDIENKIQDGKDDYLKQKEtelnt 981
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1515 ---QIEELQRQKEHLTQDLERRDQELMLQKERIQVLEDQRTRqtKILEEDLEQIKLSLRERGRELtTQRQLMQERAEEGK 1591
Cdd:TIGR00606 982 vnaQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTL--RKRENELKEVEEELKQHLKEM-GQMQVLQMKQEHQK 1058
|
890 900
....*....|....*....|....*
gi 2462579258 1592 GPSKAQRGSLEHMKLILRDKEKEVE 1616
Cdd:TIGR00606 1059 LEENIDLIKRNHVLALGRQKGYEKE 1083
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1238-1554 |
2.92e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 49.35 E-value: 2.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1238 QAAVVEARAQASAAGILEEDLRTARSALKLKNEE----VESERERAQALQEQGELKVAQGK-ALQENLALLTQTLAEREE 1312
Cdd:pfam17380 281 QKAVSERQQQEKFEKMEQERLRQEKEEKAREVERrrklEEAEKARQAEMDRQAAIYAEQERmAMERERELERIRQEERKR 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1313 EVETLRGQ--IQELEKQREMQKAALELLSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQEREQKLTVQREQIREL 1390
Cdd:pfam17380 361 ELERIRQEeiAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRL 440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1391 EKDRETQrnvLEHQLLELEKKDQMIESQRGQVQDLKKQlvtlecLALELEENHHKMECQQKLIKELEGQRETQRVALTHl 1470
Cdd:pfam17380 441 EEERARE---MERVRLEEQERQQQVERLRQQEEERKRK------KLELEKEKRDRKRAEEQRRKILEKELEERKQAMIE- 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1471 tldlEERSQELQAQssqihDLESHSTVLARELQERDQEVKSQREQ-IEELQRQKEHLTQDLERRDQELMLQKER---IQV 1546
Cdd:pfam17380 511 ----EERKRKLLEK-----EMEERQKAIYEEERRREAEEERRKQQeMEERRRIQEQMRKATEERSRLEAMERERemmRQI 581
|
....*...
gi 2462579258 1547 LEDQRTRQ 1554
Cdd:pfam17380 582 VESEKARA 589
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
1143-1428 |
3.41e-05 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 49.26 E-value: 3.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1143 VQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELhetmasLQSRLRRAELQRMEAQGERel 1222
Cdd:pfam05667 228 SQGLASRLTPEEYRKRKRTKLLKRIAEQLRSAALAGTEATSGASRSAQDLAEL------LSSFSGSSTTDTGLTKGSR-- 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1223 lQAAKENLTAQVEHLQAAVVEARAQASaagilEEDLRTARSalklknEEVESERERAQALQEQGElkvaqgkALQENLAL 1302
Cdd:pfam05667 300 -FTHTEKLQFTNEAPAATSSPPTKVET-----EEELQQQRE------EELEELQEQLEDLESSIQ-------ELEKEIKK 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1303 LTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSLD---LKKRNQEVDLQQEQIQEL----EKCRS--VLEHLPMAV 1373
Cdd:pfam05667 361 LESSIKQVEEELEELKEQNEELEKQYKVKKKTLDLLPDAeenIAKLQALVDASAQRLVELagqwEKHRVplIEEYRALKE 440
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 2462579258 1374 QEREQKLTVQReQIRELEKDRETQRNVLEhqllELEKKDQMIESQRGQVQDLKKQ 1428
Cdd:pfam05667 441 AKSNKEDESQR-KLEEIKELREKIKEVAE----EAKQKEELYKQLVAEYERLPKD 490
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
285-896 |
3.84e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 49.07 E-value: 3.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 285 QLAGCQEAVNLLQQQHDQWEEEGKALRQRLqklTGERDTLAGQTVDLQGEVDSLSKERELLQKAR-EELRQQLEVLEQEA 363
Cdd:pfam12128 277 RQEERQETSAELNQLLRTLDDQWKEKRDEL---NGELSAADAAVAKDRSELEALEDQHGAFLDADiETAAADQEQLPSWQ 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 364 WRLRRVNVELQLQGDSAQGQKEEQQEELHLAVrerERLQEMLMGLEAKQsESLSELITLREALESSHLEGelLRQEQTEv 443
Cdd:pfam12128 354 SELENLEERLKALTGKHQDVTAKYNRRRSKIK---EQNNRDIAGIKDKL-AKIREARDRQLAVAEDDLQA--LESELRE- 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 444 taalaRAEQSIAELSSSENTLKTEVADLRaaavklsalneaLALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNA---- 519
Cdd:pfam12128 427 -----QLEAGKLEFNEEEYRLKSRLGELK------------LRLNQATATPELLLQLENFDERIERAREEQEAANAever 489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 520 LQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEE 599
Cdd:pfam12128 490 LQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHFLRKEAPDWEQSIGKVISPELLHRTDLDPEV 569
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 600 VLARAVQEKEALvrekaALEVRLQAVER-DRQDLAEQLQG-LSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQA 677
Cdd:pfam12128 570 WDGSVGGELNLY-----GVKLDLKRIDVpEWAASEEELRErLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFA 644
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 678 KeviqgevrclkleldtersQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESL 757
Cdd:pfam12128 645 R-------------------TALKNARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQ 705
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 758 EREKMELEMRLKEQQTEME--------AIQAQREEERTQAESALCQMQLETEKERVSL---LETLLQTQKELADASQQLE 826
Cdd:pfam12128 706 KEQKREARTEKQAYWQVVEgaldaqlaLLKAAIAARRSGAKAELKALETWYKRDLASLgvdPDVIAKLKREIRTLERKIE 785
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462579258 827 RLRQD-MKVQKLKE--QETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQL 896
Cdd:pfam12128 786 RIAVRrQEVLRYFDwyQETWLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRL 858
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1117-1829 |
3.95e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 49.30 E-value: 3.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1117 AVASALHKLHQDLWKTQQTRDVLRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELH 1196
Cdd:TIGR02169 291 RVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLR 370
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1197 ETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVEHLQAAVVEARAQASAagiLEEDLRTARSALKLKNEEVESER 1276
Cdd:TIGR02169 371 AELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELAD---LNAAIAGIEAKINELEEEKEDKA 447
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1277 ERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQREM-------QKAALELLSLDLKKRnqeV 1349
Cdd:TIGR02169 448 LEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARAseervrgGRAVEEVLKASIQGV---H 524
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1350 DLQQEQIQELEKCRSVLEhlpMAVQEREQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQL 1429
Cdd:TIGR02169 525 GTVAQLGSVGERYATAIE---VAAGNRLNNVVVEDDAVAKEAIELLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGF 601
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1430 VTLECLALELEENHHKMECQQKLIKE--LEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQErdq 1507
Cdd:TIGR02169 602 AVDLVEFDPKYEPAFKYVFGDTLVVEdiEAARRLMGKYRMVTLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQR--- 678
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1508 evksQREQIEELQRQKEHLTQDLERRDQELMLQKERIQVLEdqrtRQTKILEEDLEQIKLSLRERGRELTTQRQLMQERA 1587
Cdd:TIGR02169 679 ----LRERLEGLKRELSSLQSELRRIENRLDELSQELSDAS----RKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLE 750
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1588 EEgkgpskaqrgsLEHMKLILRDKEKEVECQQEHIHELQELKDQLEQQLqglhrkvgetslllsqREQEIVVLQQQLQEA 1667
Cdd:TIGR02169 751 QE-----------IENVKSELKELEARIEELEEDLHKLEEALNDLEARL----------------SHSRIPEIQAELSKL 803
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1668 REQgelkEQSLQSQLDEAQRALAQRDQELEALQQEQQQAQGQEERVKEKadalqgaleqahmtLKERHGELQDHKEQARR 1747
Cdd:TIGR02169 804 EEE----VSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQ--------------IKSIEKEIENLNGKKEE 865
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1748 LEEELAVEGRRVQALEEVLGDLRAESREQEKALLALQQQCAEQAQehEVETRALQDSWLQAQA-VLKERDQELEALRAES 1826
Cdd:TIGR02169 866 LEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEA--QIEKKRKRLSELKAKLeALEEELSEIEDPKGED 943
|
...
gi 2462579258 1827 QSS 1829
Cdd:TIGR02169 944 EEI 946
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
430-880 |
6.03e-05 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 48.80 E-value: 6.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 430 HLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSR 509
Cdd:PRK04863 257 DLFKHLITESTNYVAADYMRHANERRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDH 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 510 MEAAEQARNAlqvdlAEAEKR-REALWEKNTHLEAQLQKAEEAG---AELQADLRDIQEEKEEIQKKLSESRHQQEAATT 585
Cdd:PRK04863 337 LNLVQTALRQ-----QEKIERyQADLEELEERLEEQNEVVEEADeqqEENEARAEAAEEEVDELKSQLADYQQALDVQQT 411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 586 QLEQLHQEAKRQEEvlARAVQEKEALVREKAalEVRLQAVERDRQDLAEQlqglssakellessLFEAQQQNSVIEVTKG 665
Cdd:PRK04863 412 RAIQYQQAVQALER--AKQLCGLPDLTADNA--EDWLEEFQAKEQEATEE--------------LLSLEQKLSVAQAAHS 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 666 QLEVQIQTVTQA-----KEVIQGEVRCLKLELDTERSQAEQErDAAARQLAQAEQEgktaLEQQKAAhekevNQLREKWE 740
Cdd:PRK04863 474 QFEQAYQLVRKIagevsRSEAWDVARELLRRLREQRHLAEQL-QQLRMRLSELEQR----LRQQQRA-----ERLLAEFC 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 741 KErswHQQELAKAlESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAEsalcqmQLETEKERVSLLETLLQTqkelad 820
Cdd:PRK04863 544 KR---LGKNLDDE-DELEQLQEELEARLESLSESVSEARERRMALRQQLE------QLQARIQRLAARAPAWLA------ 607
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 821 ASQQLERLRQDMKVQKLKEQETTGILQtQLQEAQRELKEAARQHRDDLAALQEESSSLLQ 880
Cdd:PRK04863 608 AQDALARLREQSGEEFEDSQDVTEYMQ-QLLERERELTVERDELAARKQALDEEIERLSQ 666
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
801-1428 |
6.06e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 48.43 E-value: 6.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 801 EKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQ 880
Cdd:TIGR00618 225 EKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQ 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 881 DKMDLQKQVEDLKSQL------------VAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVL 948
Cdd:TIGR00618 305 IEQQAQRIHTELQSKMrsrakllmkraaHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTL 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 949 QEADSIRQQELSALRQDMQEAQGEQkelsAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQEAKAAQ 1028
Cdd:TIGR00618 385 QQQKTTLTQKLQSLCKELDILQREQ----ATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIH 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1029 LQLRLRSTESQLEALAAEQQPGNQAQAQAQLASLYSALQQAL-----GSVCESRPELSGGGDSAPSVWGLEPDQNGARSL 1103
Cdd:TIGR00618 461 LQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEpcplcGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQL 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1104 FKrgplltalSAEAVASALHKLHQDLWKTQQTRDVLRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEG 1183
Cdd:TIGR00618 541 ET--------SEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLAC 612
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1184 KQNSLESEL-MELHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTA--------QVEHLQAAVVEARAQASAAGIL 1254
Cdd:TIGR00618 613 EQHALLRKLqPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERVREhalsirvlPKELLASRQLALQKMQSEKEQL 692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1255 EEDLRTARSALKLKNEEVESERERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAA 1334
Cdd:TIGR00618 693 TYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTA 772
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1335 LELLSLDLKKRNQEVDLQQEQIQEL-EKCRSVLEHLPMAVQEREQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQ 1413
Cdd:TIGR00618 773 ALQTGAELSHLAAEIQFFNRLREEDtHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLL 852
|
650
....*....|....*
gi 2462579258 1414 MIESQRGQVQDLKKQ 1428
Cdd:TIGR00618 853 KYEECSKQLAQLTQE 867
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1184-1418 |
6.53e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 6.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1184 KQNSLESELMELHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVEHLQAAVVEARAQASAagiLEEDLRTARS 1263
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAE---LEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1264 ALKLKNEEVESERERAQALQEQGELKV----AQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELLS 1339
Cdd:COG4942 98 ELEAQKEELAELLRALYRLGRQPPLALllspEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579258 1340 LDLKKrnqevdlQQEQIQELEKCRSVLEHLpmaVQEREQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQ 1418
Cdd:COG4942 178 ALLAE-------LEEERAALEALKAERQKL---LARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
315-1073 |
8.12e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 48.25 E-value: 8.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 315 QKLTGERDTLAGQTVDLQGEVDSLskeRELLQKAREELRQQLEVLEQEAWR---LRRVNVELQLQGDSAQGQKEEQQEEL 391
Cdd:pfam01576 211 RKLEGESTDLQEQIAELQAQIAEL---RAQLAKKEEELQAALARLEEETAQknnALKKIRELEAQISELQEDLESERAAR 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 392 HLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHLE-GELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVAD 470
Cdd:pfam01576 288 NKAEKQRRDLGEELEALKTELEDTLDTTAAQQELRSKREQEvTELKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQ 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 471 LRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQ---- 546
Cdd:pfam01576 368 AKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELEsvss 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 547 ---KAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQ 623
Cdd:pfam01576 448 llnEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLS 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 624 AVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEvqiqtvtQAKEVIQGEVRCLKLELDTERsQAEQER 703
Cdd:pfam01576 528 DMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLE-------KTKNRLQQELDDLLVDLDHQR-QLVSNL 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 704 DAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSwhqqeLAKALESLEREKMELEMRLKEQQTEMEAIQAQRE 783
Cdd:pfam01576 600 EKKQKKFDQMLAEEKAISARYAEERDRAEAEAREKETRALS-----LARALEEALEAKEELERTNKQLRAEMEDLVSSKD 674
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 784 E------ERTQAESALCQmQLETEKERVSLLETLLQTQKelaDASQQLERLRQDMKVQKLKEQETTgilQTQLQEAQREL 857
Cdd:pfam01576 675 DvgknvhELERSKRALEQ-QVEEMKTQLEELEDELQATE---DAKLRLEVNMQALKAQFERDLQAR---DEQGEEKRRQL 747
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 858 KEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLS 937
Cdd:pfam01576 748 VKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQIDAANKGREEAVKQLKKLQAQMKDLQRELEEARASRDEILAQ 827
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 938 LMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELS---AQMELLRQEVKEKEADFLAQEAQLLEELEashitEQQ 1014
Cdd:pfam01576 828 SKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDELAdeiASGASGKSALQDEKRRLEARIAQLEEELE-----EEQ 902
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579258 1015 LRASLWAQEAKAAQLQLRLRSTESQLEALAAEQQPGNQAQAQAQLASLYSALQQALGSV 1073
Cdd:pfam01576 903 SNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQNKELKAKLQEMEGTV 961
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1191-1404 |
8.58e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.99 E-value: 8.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1191 ELMELHETMASLQSRLRRaeLQRMEAQGERelLQAAKENLTAQVEHLQAAVVEARAQASAAgiLEEDLRTARSAL-KLKN 1269
Cdd:COG4913 236 DLERAHEALEDAREQIEL--LEPIRELAER--YAAARERLAELEYLRAALRLWFAQRRLEL--LEAELEELRAELaRLEA 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1270 EEVESERERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSLDLKKRNQEV 1349
Cdd:COG4913 310 ELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEA 389
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2462579258 1350 DLQQEQIQELEKcrsvlehlpmAVQEREQKLTVQREQIRELEKDRETQRNVLEHQ 1404
Cdd:COG4913 390 AALLEALEEELE----------ALEEALAEAEAALRDLRRELRELEAEIASLERR 434
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1863-2293 |
1.06e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.83 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1863 EQAELSRSLEASTATLQASLDACQAHSRQLEEALRIQEGEIQDQDLRYQEDVQQLQQALaqRDEELRHQQEREQLlekSL 1942
Cdd:PTZ00121 1082 DAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDAR--KAEEARKAEDAKRV---EI 1156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1943 AQRVQE-NMIQEKQNLGQEREEEEIRGLHQSVRELQLTLAQKEQEILELRETQQRNNLEALPHSHKTSPMEE----QSLK 2017
Cdd:PTZ00121 1157 ARKAEDaRKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAvkkaEEAK 1236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 2018 LDSLEPRLQRELERLQAALRQTEAREIEWREKAQDLALSLAQTKASVSSLQEVAMFLQASVLERDSEQQRLQDELELTRR 2097
Cdd:PTZ00121 1237 KDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKK 1316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 2098 ALEKERLHSPGATSTAELGSRGEQGVQLGEVSGVEAEPSPDGMEKQSWRQRLEHLQQAVARLEIDRSRLQRHNVQLRSTL 2177
Cdd:PTZ00121 1317 ADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEA 1396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 2178 EQVERERRKLKREAMRAAQA-GSLEISKATASSPTQQDGRGQKNSDAKCVAELQKEV----VLLQAQLTLERKQKQDYIT 2252
Cdd:PTZ00121 1397 KKKAEEDKKKADELKKAAAAkKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAeeakKAEEAKKKAEEAKKADEAK 1476
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 2462579258 2253 RSAQTSRElagLHHSLSHSLLAVAQAPEATVLEAETRRLDE 2293
Cdd:PTZ00121 1477 KKAEEAKK---ADEAKKKAEEAKKKADEAKKAAEAKKKADE 1514
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1159-2000 |
1.09e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 47.66 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1159 QVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVEHLQ 1238
Cdd:pfam02463 189 IIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLA 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1239 AAVVEARAQASAAGILEEDLRTARSALKLKNEEVESERERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVETLR 1318
Cdd:pfam02463 269 QVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELE 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1319 GQIQELEKQREMQKAALELLSLDLKKRNQEVDLQQEQIQELEKCRSVLEhlpmavQEREQKLTVQREQIRELEKDRETQR 1398
Cdd:pfam02463 349 IKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEEL------ELKSEEEKEAQLLLELARQLEDLLK 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1399 NVLEHQLLELEKKDQMIESQRGQVQDLKKQLVTLECLALELEENHHKMECQQKLIKELEGQRetQRVALTHLTLDLEERS 1478
Cdd:pfam02463 423 EEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQE--QLELLLSRQKLEERSQ 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1479 QELQAQSSQIHDLESHSTVLARELQERDQEVKSQREQIEELQRQKEHLTQDLE---RRDQELMLQKERIQVLEDQRTRQT 1555
Cdd:pfam02463 501 KESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVsatADEVEERQKLVRALTELPLGARKL 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1556 KILEEDLEQIKLSLRERGRELTTQRQLMQERAEEGKGPSKAQRGSLEHMKLILRDKEKE-----------VECQQEHIHE 1624
Cdd:pfam02463 581 RLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKEsakakesglrkGVSLEEGLAE 660
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1625 LQELKDQLEQQLQGLHRKVgETSLLLSQREQEIVVLQQQLQEAREQGELKEQSLQSQLDEAQRALAQRDQELEALQQEQQ 1704
Cdd:pfam02463 661 KSEVKASLSELTKELLEIQ-ELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELK 739
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1705 QAQGQEERVKEKADALQGALEQAHMTLKERHGELQDHKEQARRLEEELAVEGRRVQALEEVLGDLRAESREQEKALLALQ 1784
Cdd:pfam02463 740 LLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEE 819
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1785 QQCAEQAQEHEVETRALQdswLQAQAVLKERDQELEALRAESQSSRHQEEAARARAEALQEALGKAHAALQGKEQHLLEQ 1864
Cdd:pfam02463 820 EQLLIEQEEKIKEEELEE---LALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEK 896
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1865 AELSRSLEASTATLQASLDACQAHSRQLEEALRIQEGEIQDQDLRYQEDVQQLQQALAQRDEELRHQQEREQLLEKSLAQ 1944
Cdd:pfam02463 897 EEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVN 976
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*.
gi 2462579258 1945 RVQENMIQEKQNLGQEREEEEIRGLHQSVRELQLTLAQKEQEILELRETQQRNNLE 2000
Cdd:pfam02463 977 LMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQRLKEFLELFVSINKG 1032
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
339-617 |
1.21e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.68 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 339 SKERELLQKAREELRQQLEVLEQEawrlrrvnvelqlqgdsaqgqkeeqqeelhlavrererlqemLMGLEAKQSESLSE 418
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKE------------------------------------------LAALKKEEKALLKQ 56
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 419 LITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALAldkvglnqqLLQ 498
Cdd:COG4942 57 LAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLAL---------LLS 127
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 499 LEEENQSVcSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRH 578
Cdd:COG4942 128 PEDFLDAV-RRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEK 206
|
250 260 270
....*....|....*....|....*....|....*....
gi 2462579258 579 QQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAA 617
Cdd:COG4942 207 ELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
442-992 |
1.21e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 47.37 E-value: 1.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 442 EVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALAldkvGLNQQLLQLEEENQSVCSRMEAAEQARNALQ 521
Cdd:PRK03918 197 EKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIE----ELEKELESLEGSKRKLEEKIRELEERIEELK 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 522 VDLAEAEKRREALWE------KNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSEsRHQQEAATTQLEQLHQEAK 595
Cdd:PRK03918 273 KEIEELEEKVKELKElkekaeEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKE-LEEKEERLEELKKKLKELE 351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 596 RQEEVLARAVQEKEALVREKAALE-VRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTV 674
Cdd:PRK03918 352 KRLEELEERHELYEEAKAKKEELErLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEEL 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 675 TQAKeviqGEVRCLKLELDTERSqaeqerdaaARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKAL 754
Cdd:PRK03918 432 KKAK----GKCPVCGRELTEEHR---------KELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKL 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 755 ESLEREKMELEMRLKEQQTEmEAIQAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMkv 834
Cdd:PRK03918 499 KELAEQLKELEEKLKKYNLE-ELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAEL-- 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 835 qkLKEQETTGIlqTQLQEAQRELKEAARQHRDDLAALQEESssllqDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKL 914
Cdd:PRK03918 576 --LKELEELGF--ESVEELEERLKELEPFYNEYLELKDAEK-----ELEREEKELKKLEEELDKAFEELAETEKRLEELR 646
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579258 915 RETQEYNRIQKELEREKAS-LTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEA 992
Cdd:PRK03918 647 KELEELEKKYSEEEYEELReEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEE 725
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
525-917 |
1.46e-04 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 46.93 E-value: 1.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 525 AEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLrdiqeekEEIQKKLSESRHQQEAA-TTQLEQLHQEAKRQEEVLaR 603
Cdd:NF033838 37 AEEVRGGNNPTVTSSGNESQKEHAKEVESHLEKIL-------SEIQKSLDKRKHTQNVAlNKKLSDIKTEYLYELNVL-K 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 604 AVQEKEALVREKAALEVrlqAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQnsvievtKGQLEVQIQTVTQAK---EV 680
Cdd:NF033838 109 EKSEAELTSKTKKELDA---AFEQFKKDTLEPGKKVAEATKKVEEAEKKAKDQ-------KEEDRRNYPTNTYKTlelEI 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 681 IQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTAleqqKAAHEKEVNQLREKWEKE-RSWHQQELAKALESL-- 757
Cdd:NF033838 179 AESDVEVKKAELELVKEEAKEPRDEEKIKQAKAKVESKKA----EATRLEKIKTDREKAEEEaKRRADAKLKEAVEKNva 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 758 EREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQmqlETekervsLLETLLQTQKELADASQQLERLRQDMKVQKL 837
Cdd:NF033838 255 TSEQDKPKRRAKRGVLGEPATPDKKENDAKSSDSSVGE---ET------LPSPSLKPEKKVAEAEKKVEEAKKKAKDQKE 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 838 KEQE-----TTGILQTQLQEAQRELKEA--------ARQHRDD--LAALQEESSSLLQDKMDLQKQVEDLKSqlvAQDDS 902
Cdd:NF033838 326 EDRRnyptnTYKTLELEIAESDVKVKEAelelvkeeAKEPRNEekIKQAKAKVESKKAEATRLEKIKTDRKK---AEEEA 402
|
410
....*....|....*..
gi 2462579258 903 QRLVEQE--VQEKLRET 917
Cdd:NF033838 403 KRKAAEEdkVKEKPAEQ 419
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
106-362 |
1.59e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 47.37 E-value: 1.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 106 SREPNGSGRMDGREPAQLLLLLAKTQELEKEAHERSQELiqlksqgdlekAELQDRVTELSALLTQSQKQNEDYEKMIKA 185
Cdd:TIGR02169 659 SRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSEL-----------RRIENRLDELSQELSDASRKIGEIEKEIEQ 727
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 186 LRETVEILETNHTELMEHEASLSRNAQEEKLSLQQVIKDITQVMVEegdnIAQGSGHENSLE--LDSSIFSQFD--YQDA 261
Cdd:TIGR02169 728 LEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEED----LHKLEEALNDLEarLSHSRIPEIQaeLSKL 803
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 262 DKALTLVRSVLTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKE 341
Cdd:TIGR02169 804 EEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESR 883
|
250 260
....*....|....*....|.
gi 2462579258 342 RELLQKAREELRQQLEVLEQE 362
Cdd:TIGR02169 884 LGDLKKERDELEAQLRELERK 904
|
|
| TPH |
pfam13868 |
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ... |
694-1017 |
1.67e-04 |
|
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.
Pssm-ID: 464007 [Multi-domain] Cd Length: 341 Bit Score: 46.45 E-value: 1.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 694 TERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMELEMRLKEQQT 773
Cdd:pfam13868 22 KERDAQIAEKKRIKAEEKEEERRLDEMMEEERERALEEEEEKEEERKEERKRYRQELEEQIEEREQKRQEEYEEKLQERE 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 774 EMEAIQAQREEERtqaesalcqmqletEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEA 853
Cdd:pfam13868 102 QMDEIVERIQEED--------------QAEAEEKLEKQRQLREEIDEFNEEQAEWKELEKEEEREEDERILEYLKEKAER 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 854 QRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKAS 933
Cdd:pfam13868 168 EEEREAEREEIEEEKEREIARLRAQQEKAQDEKAERDELRAKLYQEEQERKERQKEREEAEKKARQRQELQQAREEQIEL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 934 ltLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQ 1013
Cdd:pfam13868 248 --KERRLAEEAEREEEEFERMLRKQAEDEEIEQEEAEKRRMKRLEHRRELEKQIEEREEQRAAEREEELEEGERLREEEA 325
|
....
gi 2462579258 1014 QLRA 1017
Cdd:pfam13868 326 ERRE 329
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
498-1001 |
1.89e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.94 E-value: 1.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 498 QLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQ-------LQKAEEAGAELQADLRDIQEE----K 566
Cdd:TIGR04523 37 QLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQikdlndkLKKNKDKINKLNSDLSKINSEikndK 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 567 EEIQKK---LSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSS-- 641
Cdd:TIGR04523 117 EQKNKLeveLNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNkl 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 642 -AKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLEL---DTERSQAEQERDAAARQLAQAEQEG 717
Cdd:TIGR04523 197 lKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEIsntQTQLNQLKDEQNKIKKQLSEKQKEL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 718 KTAlEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESlerekmelemRLKEQQTEMEAIQAQREEErTQAESALCQMQ 797
Cdd:TIGR04523 277 EQN-NKKIKELEKQLNQLKSEISDLNNQKEQDWNKELKS----------ELKNQEKKLEEIQNQISQN-NKIISQLNEQI 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 798 LETEKERVSLLETLLQTQKELADASQQLERLR--QDMKVQKLKEQET-TGILQTQLQEAQRELKEaarqhrddlaaLQEE 874
Cdd:TIGR04523 345 SQLKKELTNSESENSEKQRELEEKQNEIEKLKkeNQSYKQEIKNLESqINDLESKIQNQEKLNQQ-----------KDEQ 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 875 SSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSI 954
Cdd:TIGR04523 414 IKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKS 493
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 2462579258 955 RQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQL 1001
Cdd:TIGR04523 494 KEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKI 540
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
541-682 |
2.05e-04 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 46.74 E-value: 2.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 541 LEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSEsrhQQEAATTQLEQLHQEAKrqeEVLARAVQEKEALVREKAALEv 620
Cdd:PRK00409 525 LEELERELEQKAEEAEALLKEAEKLKEELEEKKEK---LQEEEDKLLEEAEKEAQ---QAIKEAKKEADEIIKELRQLQ- 597
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462579258 621 RLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVtkGQlEVQIQTVTQAKEVIQ 682
Cdd:PRK00409 598 KGGYASVKAHELIEARKRLNKANEKKEKKKKKQKEKQEELKV--GD-EVKYLSLGQKGEVLS 656
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1655-1832 |
2.15e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.83 E-value: 2.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1655 QEIVVLQQQLQEAREQ-GELKEQSLQSQLDEAQRALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKE 1733
Cdd:COG4913 255 EPIRELAERYAAARERlAELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRG 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1734 RHGE-LQDHKEQARRLEEELAVEGRRVQALEEVLGDLRAESREQEKALLALQQQCAEQAQEHEVETRALQDSWLQAQAVL 1812
Cdd:COG4913 335 NGGDrLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAAL 414
|
170 180
....*....|....*....|
gi 2462579258 1813 KERDQELEALRAESQSSRHQ 1832
Cdd:COG4913 415 RDLRRELRELEAEIASLERR 434
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
734-910 |
2.26e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.30 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 734 QLREKWEKERSWhqQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERvslLETLLQ 813
Cdd:COG4717 79 ELKEAEEKEEEY--AELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALEAELAELPER---LEELEE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 814 TQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLK 893
Cdd:COG4717 154 RLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLE 233
|
170
....*....|....*..
gi 2462579258 894 SQLVAQDDSQRLVEQEV 910
Cdd:COG4717 234 NELEAAALEERLKEARL 250
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
430-803 |
2.42e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 46.48 E-value: 2.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 430 HLEGELL--RQEQTEVTAALARAEQSIAELSSSENTLKTevaDLRAAAVKLSALNEALALdkvglNQQLLQLEEENQSVC 507
Cdd:COG3096 289 ELRRELFgaRRQLAEEQYRLVEMARELEELSARESDLEQ---DYQAASDHLNLVQTALRQ-----QEKIERYQEDLEELT 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 508 SRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQL-----------------QKAEEAGAELQADLRDIQEEKEEIQ 570
Cdd:COG3096 361 ERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLadyqqaldvqqtraiqyQQAVQALEKARALCGLPDLTPENAE 440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 571 KKLSESRHQQEAATTQLEQLHQ------EAKRQEEVLARAVQEKEALVREKAALEVRLQAVE--RDRQDLAEQLQGLssa 642
Cdd:COG3096 441 DYLAAFRAKEQQATEEVLELEQklsvadAARRQFEKAYELVCKIAGEVERSQAWQTARELLRryRSQQALAQRLQQL--- 517
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 643 kellESSLFEAQQQnsvievtkgqLEVQIQTVTQAKEVIQGEVRCL--KLELDTERSQAEQERDAAARQLAQAeQEGKTA 720
Cdd:COG3096 518 ----RAQLAELEQR----------LRQQQNAERLLEEFCQRIGQQLdaAEELEELLAELEAQLEELEEQAAEA-VEQRSE 582
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 721 LEQQKAAHEKEVNQLRekwEKERSWHqqelaKALESLEREKMELEMRLKEQQTEMEAIQ--AQREEERTQAESALCQMQL 798
Cdd:COG3096 583 LRQQLEQLRARIKELA---ARAPAWL-----AAQDALERLREQSGEALADSQEVTAAMQqlLEREREATVERDELAARKQ 654
|
....*
gi 2462579258 799 ETEKE 803
Cdd:COG3096 655 ALESQ 659
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1133-1825 |
2.62e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.58 E-value: 2.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1133 QQTRDVLRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRLRRAELQ 1212
Cdd:TIGR00606 348 EQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQ 427
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1213 ----RMEAQGERELLQAAKENLTAQVEHLQAAVVEAR-AQASAAGILE--EDLRTARSALKL--KNEEVESERERAQALQ 1283
Cdd:TIGR00606 428 adeiRDEKKGLGRTIELKKEILEKKQEELKFVIKELQqLEGSSDRILEldQELRKAERELSKaeKNSLTETLKKEVKSLQ 507
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1284 -EQGELKVAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSL--DLKKRNQEVDLQQEQIQELE 1360
Cdd:TIGR00606 508 nEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLlgYFPNKKQLEDWLHSKSKEIN 587
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1361 KCRSVLEHLPMAVQEREQkltvQREQIRELEKDRETQRNVLEHQLLEL---EKKDQMIESQRGQVQDLKKQLV-----TL 1432
Cdd:TIGR00606 588 QTRDRLAKLNKELASLEQ----NKNHINNELESKEEQLSSYEDKLFDVcgsQDEESDLERLKEEIEKSSKQRAmlagaTA 663
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1433 ECLALELEENHHKMECQQKLIKELEGQRETQRVA------LTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQERD 1506
Cdd:TIGR00606 664 VYSQFITQLTDENQSCCPVCQRVFQTEAELQEFIsdlqskLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKE 743
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1507 QEVKSQREQIEELQRQKEHLTQDLERRDQELMLQKERIQVLEDQRTRQTKIleedlEQIKLSLRERGRELTTQRQLMQer 1586
Cdd:TIGR00606 744 KEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIM-----ERFQMELKDVERKIAQQAAKLQ-- 816
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1587 aeegkgpSKAQRGSLEHMKLILRDKEKEVECQQEHIHELQELKDQLEQQLQGLHRKVGEtsllLSQREQEIVVLQQQLQE 1666
Cdd:TIGR00606 817 -------GSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNE----LKSEKLQIGTNLQRRQQ 885
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1667 AREQGELKEQSLQSQLDEAQRALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKERHGELQDHKEQAR 1746
Cdd:TIGR00606 886 FEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQ 965
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579258 1747 RLEEELAVEgrRVQALEEVLGDLRAESREQEKallalqQQCAEQAQEHEVETRALQDSWLQAQAVLKERDQELEALRAE 1825
Cdd:TIGR00606 966 DGKDDYLKQ--KETELNTVNAQLEECEKHQEK------INEDMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVEEE 1036
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
449-661 |
3.27e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.78 E-value: 3.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 449 RAEQSIAELSSSENTLKTEVADLRAaavKLSALNEALAldKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAE 528
Cdd:COG3206 165 NLELRREEARKALEFLEEQLPELRK---ELEEAEAALE--EFRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 529 KRREALWEKN----------------THLEAQLQKAEEAGAELQADLRD----IQEEKEEIQKKLSESRHQQEAATTQLE 588
Cdd:COG3206 240 ARLAALRAQLgsgpdalpellqspviQQLRAQLAELEAELAELSARYTPnhpdVIALRAQIAALRAQLQQEAQRILASLE 319
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462579258 589 QLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIE 661
Cdd:COG3206 320 AELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEARLAEALTVGNVRVID 392
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
257-784 |
3.34e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 46.21 E-value: 3.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 257 DYQDADKALTLVRSVLTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAG---------- 326
Cdd:PRK03918 159 DYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKevkeleelke 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 327 -------QTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVN------VELQLQGDSAQGQKEEQQEELHL 393
Cdd:PRK03918 239 eieelekELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKekaeeyIKLSEFYEEYLDELREIEKRLSR 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 394 AVRERERLQEMLMGLEAKQSE------SLSELITLREALESSHLEGELLRQEQT---------------EVTAALARAEQ 452
Cdd:PRK03918 319 LEEEINGIEERIKELEEKEERleelkkKLKELEKRLEELEERHELYEEAKAKKEelerlkkrltgltpeKLEKELEELEK 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 453 SIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARnaLQVDLAEAEKRRE 532
Cdd:PRK03918 399 AKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELLEEYTAELKR--IEKELKEIEEKER 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 533 ALWEKNTHLEAQLQKAEEAGAelqadLRDIQEEKEEIQKKLSESRHQQ-EAATTQLEQLHQEA---KRQEEVLARAVQEK 608
Cdd:PRK03918 477 KLRKELRELEKVLKKESELIK-----LKELAEQLKELEEKLKKYNLEElEKKAEEYEKLKEKLiklKGEIKSLKKELEKL 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 609 EALVREKAALEVRLQAVERDRQDLAEQLQ--GLSSAKELlesslfeaqqqnsviEVTKGQLEVQIQTVTQAKEVIQgEVR 686
Cdd:PRK03918 552 EELKKKLAELEKKLDELEEELAELLKELEelGFESVEEL---------------EERLKELEPFYNEYLELKDAEK-ELE 615
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 687 CLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKaLESLEREKMELEM 766
Cdd:PRK03918 616 REEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEYLELSRELAGLRAE-LEELEKRREEIKK 694
|
570
....*....|....*...
gi 2462579258 767 RLKEQQTEMEAIQAQREE 784
Cdd:PRK03918 695 TLEKLKEELEEREKAKKE 712
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
708-934 |
3.36e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.06 E-value: 3.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 708 RQLAQAEQEGKTALEQQKAahekeVNQLREKWEKerswhQQELAKALESLEREKMELemRLKEQQTEMEAIQAQREEERT 787
Cdd:COG4913 235 DDLERAHEALEDAREQIEL-----LEPIRELAER-----YAAARERLAELEYLRAAL--RLWFAQRRLELLEAELEELRA 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 788 QAESALCQMQlETEKERVSLLETLLQTQKELADAS-QQLERLRQDMKVQKLKEQETTGILQtQLQEAQRELKEAARQHRD 866
Cdd:COG4913 303 ELARLEAELE-RLEARLDALREELDELEAQIRGNGgDRLEQLEREIERLERELEERERRRA-RLEALLAALGLPLPASAE 380
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462579258 867 DLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQddsqrlvEQEVQEKLREtqeynriqkeLEREKASL 934
Cdd:COG4913 381 EFAALRAEAAALLEALEEELEALEEALAEAEAA-------LRDLRRELRE----------LEAEIASL 431
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1926-2103 |
3.82e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.06 E-value: 3.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1926 EELRHQQEREQLLEKSLAQRVQENMIQEKQNLGQERE--EEEIRGLHQSVRELQLTLAQKEQEILELRETQQRNNLEALP 2003
Cdd:COG4913 262 ERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEelRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLE 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 2004 hshktspmeeqslkldslepRLQRELERLQAALRQTEAREIEWREKAQDLALSLAQTKASVSSLQEVAMFLQASVLERDS 2083
Cdd:COG4913 342 --------------------QLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELE 401
|
170 180
....*....|....*....|
gi 2462579258 2084 EQQRLQDELELTRRALEKER 2103
Cdd:COG4913 402 ALEEALAEAEAALRDLRREL 421
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
1166-1658 |
3.84e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 45.98 E-value: 3.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1166 DLQRQLSQNQEEKSKWEGKQNSLESELMELhetmASLQSRLRRAELQRMEAQGERELLQAAKENLTAQvehLQAAVVEAR 1245
Cdd:pfam12128 231 QAIAGIMKIRPEFTKLQQEFNTLESAELRL----SHLHFGYKSDETLIASRQEERQETSAELNQLLRT---LDDQWKEKR 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1246 AQASAagileeDLRTARSALKLKNEEVESERERAQALQEQGelkVAQGKALQENLALLTQTLAEREEEVETLRGQIQELE 1325
Cdd:pfam12128 304 DELNG------ELSAADAAVAKDRSELEALEDQHGAFLDAD---IETAAADQEQLPSWQSELENLEERLKALTGKHQDVT 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1326 KQREMQKAALEL-LSLDLKKRNQEVDLQQEQI-QELEKCRSVLEHLPMAVQER-EQKLTVQREQIRELE------KDRET 1396
Cdd:pfam12128 375 AKYNRRRSKIKEqNNRDIAGIKDKLAKIREARdRQLAVAEDDLQALESELREQlEAGKLEFNEEEYRLKsrlgelKLRLN 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1397 QRNVLEHQLLELEKKDQMIESQRGQVQDLKKqlvtleclaleleenhhKMECQQKLIKELEGQRETQRVALTHLTLDLEE 1476
Cdd:pfam12128 455 QATATPELLLQLENFDERIERAREEQEAANA-----------------EVERLQSELRQARKRRDQASEALRQASRRLEE 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1477 RSQELQAQSSQ--------IHDL--------ESHSTVLARELQERDQEVKSQREQIEELQRQKEHLTQDLERRD------ 1534
Cdd:pfam12128 518 RQSALDELELQlfpqagtlLHFLrkeapdweQSIGKVISPELLHRTDLDPEVWDGSVGGELNLYGVKLDLKRIDvpewaa 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1535 QELMLQKERIQVLEDQRTRQTKI--LEEDLEQIKLSLRERGRELTTQRQ-LMQERAEEGKGPSKAQRGSLEHMKLILRDK 1611
Cdd:pfam12128 598 SEEELRERLDKAEEALQSAREKQaaAEEQLVQANGELEKASREETFARTaLKNARLDLRRLFDEKQSEKDKKNKALAERK 677
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 2462579258 1612 EKEVECQQEHIHELQELKDQLEQQLQGLHRKVGETSLLLSQREQEIV 1658
Cdd:pfam12128 678 DSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQVVE 724
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
618-873 |
3.88e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.78 E-value: 3.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 618 LEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIevtkgQLEVQIQTVTQAKEviqgevrclklELDTERS 697
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLV-----DLSEEAKLLLQQLS-----------ELESQLA 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 698 QAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQlrekwekerswhqqELAKALESLEREKMELEMRLKEQQTEMEA 777
Cdd:COG3206 230 EARAELAEAEARLAALRAQLGSGPDALPELLQSPVIQ--------------QLRAQLAELEAELAELSARYTPNHPDVIA 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 778 IQAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQdmkvqklkeqettgiLQTQLQEAQREL 857
Cdd:COG3206 296 LRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPE---------------LEAELRRLEREV 360
|
250
....*....|....*.
gi 2462579258 858 KEAARQHRDDLAALQE 873
Cdd:COG3206 361 EVARELYESLLQRLEE 376
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
1207-1589 |
4.01e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 46.10 E-value: 4.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1207 RRAELQRMEAQGERELlQAAKENLTAQVEHLQAAVVEARAQASAAGILEEDLRTARSALKLKNEevesererAQALQEqg 1286
Cdd:COG3096 279 ERRELSERALELRREL-FGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAASDHLNLVQT--------ALRQQE-- 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1287 elKVAQgkaLQENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSLDLKKRNQEVDLQQ-------EQIQEL 1359
Cdd:COG3096 348 --KIER---YQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQtraiqyqQAVQAL 422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1360 EKCRSVLEHLPMA---VQEREQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIES-----QRGQVQDLKKQLVT 1431
Cdd:COG3096 423 EKARALCGLPDLTpenAEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKiagevERSQAWQTARELLR 502
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1432 LECLALELEENHHKMECQQK-LIKELEGQRETQRValthltldLEERSQELQAQSSQIHDLESHSTVLARELQERDQEVK 1510
Cdd:COG3096 503 RYRSQQALAQRLQQLRAQLAeLEQRLRQQQNAERL--------LEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAA 574
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1511 SQREQIEELQRQKEHLTQD---LERRDQELMLQKERIQVLEDQRTRQTKILEEDLEQIKLSLrERGRELTTQRQLMQERA 1587
Cdd:COG3096 575 EAVEQRSELRQQLEQLRARikeLAARAPAWLAAQDALERLREQSGEALADSQEVTAAMQQLL-EREREATVERDELAARK 653
|
..
gi 2462579258 1588 EE 1589
Cdd:COG3096 654 QA 655
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
597-827 |
4.76e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 4.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 597 QEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQ 676
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 677 AKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGkTALEQQKAAHEKEVNQLREKwekerswhQQELAKALES 756
Cdd:COG4942 98 ELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRL-QYLKYLAPARREQAEELRAD--------LAELAALRAE 168
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2462579258 757 LEREKMELEMRLKEQQTEMEAIQAQREEERTQAESAlcQMQLETEKERvslLETLLQTQKELADASQQLER 827
Cdd:COG4942 169 LEAERAELEALLAELEEERAALEALKAERQKLLARL--EKELAELAAE---LAELQQEAEELEALIARLEA 234
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
769-1037 |
5.16e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 45.67 E-value: 5.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 769 KEQQTEMEAIQAQREEErtqAESALCQMQLET-----------EKERVSLLETLLQTQKELADASQQLERLRQDMKVQKL 837
Cdd:PRK11281 39 ADVQAQLDALNKQKLLE---AEDKLVQQDLEQtlalldkidrqKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 838 KEQETTgilqtqlqeaqrelkeaarqhrdDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRET 917
Cdd:PRK11281 116 ETLSTL-----------------------SLRQLESRLAQTLDQLQNAQNDLAEYNSQLVSLQTQPERAQAALYANSQRL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 918 QEYNRIQKELEREKASLTLS---LMEKEQRLLVLQeaDSIRQQELSA--LRQDMQEAQ-----GEQKELSAQMELLRQEV 987
Cdd:PRK11281 173 QQIRNLLKGGKVGGKALRPSqrvLLQAEQALLNAQ--NDLQRKSLEGntQLQDLLQKQrdyltARIQRLEHQLQLLQEAI 250
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2462579258 988 KEKEadfLAQEAQLLEELEASHITEQQLRASLWAQEAkAAQLQLR---LRSTE 1037
Cdd:PRK11281 251 NSKR---LTLSEKTVQEAQSQDEAARIQANPLVAQEL-EINLQLSqrlLKATE 299
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
562-840 |
5.59e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 45.11 E-value: 5.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 562 IQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEvlaravQEKEALVREKAALEVRLQAVERDRQDLAEQ--LQGL 639
Cdd:pfam17380 301 LRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAE------QERMAMERERELERIRQEERKRELERIRQEeiAMEI 374
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 640 SSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQER---DAAARQLAQAEQE 716
Cdd:pfam17380 375 SRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRrleEERAREMERVRLE 454
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 717 GKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALES--LEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALC 794
Cdd:pfam17380 455 EQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRkiLEKELEERKQAMIEEERKRKLLEKEMEERQKAIYEEER 534
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2462579258 795 QMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQ 840
Cdd:pfam17380 535 RREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMEREREMMRQ 580
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1499-1727 |
5.77e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.29 E-value: 5.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1499 ARELQERDQEVKSQREQIEELQRQKEHLTQdLERRDQELMLQKERIQVLEDQRTRQTkiLEEDLEQIKLsLRERGRELTT 1578
Cdd:COG4913 227 ADALVEHFDDLERAHEALEDAREQIELLEP-IRELAERYAAARERLAELEYLRAALR--LWFAQRRLEL-LEAELEELRA 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1579 QRQLMQERAEEGKGPSKAQRGSLEHMKLILRDKE-KEVECQQEHIHELQELKDQLEQQLQGLHRKVGETSLLLSQREQEI 1657
Cdd:COG4913 303 ELARLEAELERLEARLDALREELDELEAQIRGNGgDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEF 382
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1658 VVLQQQLQEAREQGELKEQSLQSQLDEAQRALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQA 1727
Cdd:COG4913 383 AALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDALAEA 452
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
859-1679 |
5.99e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 45.42 E-value: 5.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 859 EAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKAsltlSL 938
Cdd:TIGR00606 189 ETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLS----KI 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 939 MEKEQRLLVLQEADSIRQQELSALRQDMQEA-QGEQKELSAQMELLRQEVKEKEADF---------LAQEAQLLEELEas 1008
Cdd:TIGR00606 265 MKLDNEIKALKSRKKQMEKDNSELELKMEKVfQGTDEQLNDLYHNHQRTVREKERELvdcqrelekLNKERRLLNQEK-- 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1009 hiTEQQLRASLWAQEAKAAQLQLRLRSTESQLEALAAEQQPGNQAQAQAQLASLYSALQQAlGSVCESRPELSGGGDSAP 1088
Cdd:TIGR00606 343 --TELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFHTLVIE-RQEDEAKTAAQLCADLQS 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1089 SVWGLEPDQNGARSLFKRGPLLTALSAEAVASALHKLHQDLWKTQQTRDVLrDQVQKLEERLTDTEAE--KSQVHTELQD 1166
Cdd:TIGR00606 420 KERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSS-DRILELDQELRKAERElsKAEKNSLTET 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1167 LQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRLRRAELQRMEAQGERELLQAAKENLTAQVEHLQAAVVEARA 1246
Cdd:TIGR00606 499 LKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDW 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1247 QASaagiLEEDLRTARSALKLKNEEVESERERAQALQEQGELKVAQGKALQENLALLTQTLAErEEEVETLRGQIQELEK 1326
Cdd:TIGR00606 579 LHS----KSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDE-ESDLERLKEEIEKSSK 653
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1327 QREMQKAALELLSLDLKKRNQE----VDLQQEQIQELEKCRSVLEHLPMAVQEREQKLTVQREQIRELEKDRETQRNVLE 1402
Cdd:TIGR00606 654 QRAMLAGATAVYSQFITQLTDEnqscCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAP 733
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1403 HQLLELEKKDQMIESQRGQVQDLKKQLVTLECLALELEENHHKMECQQKLIKELegQRETQRVALTHLTLDLEERSQELQ 1482
Cdd:TIGR00606 734 GRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVC--LTDVTIMERFQMELKDVERKIAQQ 811
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1483 AQSSQIHDLESHSTVLARELQERDQEVKSQREQIEELQRQKEHLTQDLERRDQEL-MLQKERIQVLEDQRTRQTkiLEED 1561
Cdd:TIGR00606 812 AAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTnELKSEKLQIGTNLQRRQQ--FEEQ 889
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1562 LEQIKLSLRERGRELTTQRqlmqeraEEGKGPSKAQRGSLEHMKLILRDKEKEVECQQEHIHELQELKDQLEQQLQGLHR 1641
Cdd:TIGR00606 890 LVELSTEVQSLIREIKDAK-------EQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIEN 962
|
810 820 830
....*....|....*....|....*....|....*....
gi 2462579258 1642 KVGE-TSLLLSQREQEIVVLQQQLQEAREQGELKEQSLQ 1679
Cdd:TIGR00606 963 KIQDgKDDYLKQKETELNTVNAQLEECEKHQEKINEDMR 1001
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
499-790 |
6.02e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 44.51 E-value: 6.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 499 LEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRH 578
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 579 QQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNS 658
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDEL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 659 VIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREK 738
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAIL 268
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2462579258 739 WEKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAE 790
Cdd:COG4372 269 VEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAA 320
|
|
| hsdR |
PRK11448 |
type I restriction enzyme EcoKI subunit R; Provisional |
918-1020 |
6.59e-04 |
|
type I restriction enzyme EcoKI subunit R; Provisional
Pssm-ID: 236912 [Multi-domain] Cd Length: 1123 Bit Score: 45.33 E-value: 6.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 918 QEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADsirqQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQ 997
Cdd:PRK11448 142 NLLHALQQEVLTLKQQLELQAREKAQSQALAEAQQ----QELVALEGLAAELEEKQQELEAQLEQLQEKAAETSQERKQK 217
|
90 100 110
....*....|....*....|....*....|..
gi 2462579258 998 EAQL---------LEELEASHITEQQLRASLW 1020
Cdd:PRK11448 218 RKEItdqaakrleLSEEETRILIDQQLRKAGW 249
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
330-554 |
7.14e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.37 E-value: 7.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 330 DLQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLmgle 409
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL---- 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 410 AKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAElsssenTLKTEVADLRAAAVKLSALNEALALDK 489
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAP------ARREQAEELRADLAELAALRAELEAER 173
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462579258 490 VGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAE 554
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
748-1020 |
7.30e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 44.90 E-value: 7.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 748 QELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKErvSLLETLLQTQKELADASQQLER 827
Cdd:PRK11281 76 DRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLSTLSLRQLESRLA--QTLDQLQNAQNDLAEYNSQLVS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 828 lrqdmkvqklkeqettgiLQTQLQEAQRELKEAARQhrddlaaLQEESSSLLQDKMDLQKQVEDLKSQLVAQddsQRLVE 907
Cdd:PRK11281 154 ------------------LQTQPERAQAALYANSQR-------LQQIRNLLKGGKVGGKALRPSQRVLLQAE---QALLN 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 908 QEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEAdsIRQQELSALRQDMQEAQGEQKELSAQM-ELLRQE 986
Cdd:PRK11281 206 AQNDLQRKSLEGNTQLQDLLQKQRDYLTARIQRLEHQLQLLQEA--INSKRLTLSEKTVQEAQSQDEAARIQAnPLVAQE 283
|
250 260 270
....*....|....*....|....*....|....*.
gi 2462579258 987 --VKEKEADFLAQEAQLLEELeashiTEQQLRASLW 1020
Cdd:PRK11281 284 leINLQLSQRLLKATEKLNTL-----TQQNLRVKNW 314
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
425-865 |
7.50e-04 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 45.04 E-value: 7.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 425 ALESSHLEGELLRQEQTEVTAALARAEQSIAE-LSSSENTLKTEVADLRAAAVKLSALNEALALDKvGLNQQLLQLEEEN 503
Cdd:PRK10929 17 AYAATAPDEKQITQELEQAKAAKTPAQAEIVEaLQSALNWLEERKGSLERAKQYQQVIDNFPKLSA-ELRQQLNNERDEP 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 504 QSVCSRMEAAEQARNALQVDLAEAEKRRealweknthleaQLQKAEEAGAELQADLRDIQEEKEEIQKKLS--ESRHQ-Q 580
Cdd:PRK10929 96 RSVPPNMSTDALEQEILQVSSQLLEKSR------------QAQQEQDRAREISDSLSQLPQQQTEARRQLNeiERRLQtL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 581 EAATTQLEQLhQEAKRQEEVLARAVQEKEAlvrEKAALEVR-LQAVERDRQDLAE-QLQGLSSAKELLESSLFEAQQQNs 658
Cdd:PRK10929 164 GTPNTPLAQA-QLTALQAESAALKALVDEL---ELAQLSANnRQELARLRSELAKkRSQQLDAYLQALRNQLNSQRQRE- 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 659 vievTKGQLEVQIQTVTQAKEVIQGEVRCLKL--ELDTERSQAEQERDAAARQLAQAEQEgktaLEQQKAAhekeVNQLR 736
Cdd:PRK10929 239 ----AERALESTELLAEQSGDLPKSIVAQFKInrELSQALNQQAQRMDLIASQQRQAASQ----TLQVRQA----LNTLR 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 737 EK--WEKERSwhqqelakAL-ESLEREKMELEMRLKEQQ--TEMEAIQAQR---EE--ERTQAESALCQ---MQLETEKE 803
Cdd:PRK10929 307 EQsqWLGVSN--------ALgEALRAQVARLPEMPKPQQldTEMAQLRVQRlryEDllNKQPQLRQIRQadgQPLTAEQN 378
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462579258 804 RVslLETLLQTQKELADA------SQQLErlrqdmkVQKLKeqettgILQTQLQEAQRELKEAArqHR 865
Cdd:PRK10929 379 RI--LDAQLRTQRELLNSllsggdTLILE-------LTKLK------VANSQLEDALKEVNEAT--HR 429
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1162-1403 |
7.94e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 44.89 E-value: 7.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1162 TELQDLQRQLSqnqeEKSKWEGKQNSLESELMELH-------------ETMASLQSRLRRAELQRMEAQG--------ER 1220
Cdd:PLN02939 153 QALEDLEKILT----EKEALQGKINILEMRLSETDariklaaqekihvEILEEQLEKLRNELLIRGATEGlcvhslskEL 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1221 ELLQAAKENLTAQVEHLQAAVVEARAQASAAGILEEDlrtaRSALKLKNEEVESERERAQA-LQEQGELKVAQGKALQEN 1299
Cdd:PLN02939 229 DVLKEENMLLKDDIQFLKAELIEVAETEERVFKLEKE----RSLLDASLRELESKFIVAQEdVSKLSPLQYDCWWEKVEN 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1300 LALLTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSLDlKKRNQEVDLQQEQIQELEkcrsvlEHLPMAVQEREQK 1379
Cdd:PLN02939 305 LQDLLDRATNQVEKAALVLDQNQDLRDKVDKLEASLKEANVS-KFSSYKVELLQQKLKLLE------ERLQASDHEIHSY 377
|
250 260
....*....|....*....|....*....
gi 2462579258 1380 LTVQREQIRELEKD-----RETQRNVLEH 1403
Cdd:PLN02939 378 IQLYQESIKEFQDTlsklkEESKKRSLEH 406
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
721-947 |
8.28e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 44.62 E-value: 8.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 721 LEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMELEmRLKEQQTEMEAIQaqreEERTQAESALCQ--MQL 798
Cdd:PHA02562 193 IQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIE-ELTDELLNLVMDI----EDPSAALNKLNTaaAKI 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 799 ETEKERVSLLETLLQTQKELADASQQLERlrQDMKVQKLKEQETTgiLQTQLQEAQrelkeaarQHRDDLAALQEESSSL 878
Cdd:PHA02562 268 KSKIEQFQKVIKMYEKGGVCPTCTQQISE--GPDRITKIKDKLKE--LQHSLEKLD--------TAIDELEEIMDEFNEQ 335
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462579258 879 LQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQ----EKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLV 947
Cdd:PHA02562 336 SKKLLELKNKISTNKQSLITLVDKAKKVKAAIEelqaEFVDNAEELAKLQDELDKIVKTKSELVKEKYHRGIV 408
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
432-729 |
8.74e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 44.12 E-value: 8.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 432 EGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALdkvgLNQQLLQLEEENQSVCSRME 511
Cdd:COG4372 22 TGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQ----LEEELEELNEQLQAAQAELA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 512 AAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLH 591
Cdd:COG4372 98 QAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALS 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 592 QEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQI 671
Cdd:COG4372 178 EAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVIL 257
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 2462579258 672 QTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHE 729
Cdd:COG4372 258 KEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALED 315
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1685-1909 |
9.67e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 9.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1685 AQRALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKERHGELQDHKEQARRLEEELAVEGRRVQALEE 1764
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1765 VLGDLRAESREQEKALLALQQQCAEQAQEHEVETRALQDSWLQAQAVLKERDQELEALRAESQSSRHQEEAARARAEALQ 1844
Cdd:COG4942 98 ELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462579258 1845 EALGKAHAALQGKEQHLLEQAELSRSLEASTATLQASLDACQAHSRQLEEALRIQEGEIQDQDLR 1909
Cdd:COG4942 178 ALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
525-751 |
1.03e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 44.05 E-value: 1.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 525 AEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVL--- 601
Cdd:COG3883 12 AFADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELger 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 602 ARAVQEKEALVREKAALEV---------RLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQ 672
Cdd:COG3883 92 ARALYRSGGSVSYLDVLLGsesfsdfldRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKA 171
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579258 673 TVTQAKEVIQGEVRclklELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELA 751
Cdd:COG3883 172 ELEAQQAEQEALLA----QLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASA 246
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
564-937 |
1.13e-03 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 43.90 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 564 EEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAK 643
Cdd:pfam19220 20 EDLRSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERAAYGKLRRELAGLTRRLSAAEGELEELVARLAKLEAAL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 644 ELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLEL---DTERSQAEQERDAAARQLAQAEQEGKta 720
Cdd:pfam19220 100 REAEAAKEELRIELRDKTAQAEALERQLAAETEQNRALEEENKALREEAqaaEKALQRAEGELATARERLALLEQENR-- 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 721 leQQKAAHEKEVNQLREKWEKerswhQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERT--QAESALCQMQL 798
Cdd:pfam19220 178 --RLQALSEEQAAELAELTRR-----LAELETQLDATRARLRALEGQLAAEQAERERAEAQLEEAVEahRAERASLRMKL 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 799 ETEKERVSLLETLLQ----TQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAARQhRDDLAALQEE 874
Cdd:pfam19220 251 EALTARAAATEQLLAearnQLRDRDEAIRAAERRLKEASIERDTLERRLAGLEADLERRTQQFQEMQRA-RAELEERAEM 329
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2462579258 875 SSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEynRIQKELEREKASLTLS 937
Cdd:pfam19220 330 LTKALAAKDAALERAEERIASLSDRIAELTKRFEVERAALEQANR--RLKEELQRERAERALA 390
|
|
| TPH |
pfam13868 |
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of ... |
564-863 |
1.13e-03 |
|
Trichohyalin-plectin-homology domain; This family is a mixtrue of two different families of eukaryotic proteins. Trichoplein or mitostatin, was first defined as a meiosis-specific nuclear structural protein. It has since been linked with mitochondrial movement. It is associated with the mitochondrial outer membrane, and over-expression leads to reduction in mitochondrial motility whereas lack of it enhances mitochondrial movement. The activity appears to be mediated through binding the mitochondria to the actin intermediate filaments (IFs). The family is in the trichohyalin-plectin-homology domain.
Pssm-ID: 464007 [Multi-domain] Cd Length: 341 Bit Score: 43.75 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 564 EEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAK 643
Cdd:pfam13868 29 AEKKRIKAEEKEEERRLDEMMEEERERALEEEEEKEEERKEERKRYRQELEEQIEEREQKRQEEYEEKLQEREQMDEIVE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 644 ELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVR---------CLKLELDTERSQAEQERDAAARQLAQAE 714
Cdd:pfam13868 109 RIQEEDQAEAEEKLEKQRQLREEIDEFNEEQAEWKELEKEEEReederileyLKEKAEREEEREAEREEIEEEKEREIAR 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 715 QEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALC 794
Cdd:pfam13868 189 LRAQQEKAQDEKAERDELRAKLYQEEQERKERQKEREEAEKKARQRQELQQAREEQIELKERRLAEEAEREEEEFERMLR 268
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579258 795 QMQLETEKERVSLLETLLQtQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAARQ 863
Cdd:pfam13868 269 KQAEDEEIEQEEAEKRRMK-RLEHRRELEKQIEEREEQRAAEREEELEEGERLREEEAERRERIEEERQ 336
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1312-1532 |
1.33e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.14 E-value: 1.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1312 EEVETLRGQIQELEKQREmQKAALEllslDLKKRNQEVDLQQEQIQELEKCRSVLEHlpmavQEREQKLTVQREQIRELE 1391
Cdd:COG4913 232 EHFDDLERAHEALEDARE-QIELLE----PIRELAERYAAARERLAELEYLRAALRL-----WFAQRRLELLEAELEELR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1392 KDR---ETQRNVLEHQLLELEKKDQMIESQR-----GQVQDLKKQLVTLeclaleleenhhkmecqQKLIKELEGQRETQ 1463
Cdd:COG4913 302 AELarlEAELERLEARLDALREELDELEAQIrgnggDRLEQLEREIERL-----------------ERELEERERRRARL 364
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579258 1464 RVALTHLTLDLEERSQELQAQSSQIHDLeshSTVLARELQERDQEVKSQREQIEELQRQKEHLTQDLER 1532
Cdd:COG4913 365 EALLAALGLPLPASAEEFAALRAEAAAL---LEALEEELEALEEALAEAEAALRDLRRELRELEAEIAS 430
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
500-1015 |
1.41e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 44.01 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 500 EEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQ-------KAEEAGAELQADLRDIQEEKEEIQKK 572
Cdd:pfam01576 4 EEEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQaetelcaEAEEMRARLAARKQELEEILHELESR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 573 LSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFE 652
Cdd:pfam01576 84 LEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEERISE 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 653 AQQQ-NSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTA-LEQQKAAHEK 730
Cdd:pfam01576 164 FTSNlAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAeLRAQLAKKEE 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 731 EVNQLREKWEKERSWHQQELAKAleslerekMELEMRLKEQQTEMEAIQAQREeertQAESALCQMQLETEKERVSLLET 810
Cdd:pfam01576 244 ELQAALARLEEETAQKNNALKKI--------RELEAQISELQEDLESERAARN----KAEKQRRDLGEELEALKTELEDT 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 811 LLQTqkeladASQQLERLRQDMKVQKLKE--QETTGILQTQLQE-------AQRELKEAARQHRDDLAALQEESSSLLQD 881
Cdd:pfam01576 312 LDTT------AAQQELRSKREQEVTELKKalEEETRSHEAQLQEmrqkhtqALEELTEQLEQAKRNKANLEKAKQALESE 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 882 KMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSA 961
Cdd:pfam01576 386 NAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSS 465
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 2462579258 962 LRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQL 1015
Cdd:pfam01576 466 LESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQL 519
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
846-1044 |
1.41e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.35 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 846 LQTQLQEAQRELKEAarqhRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQK 925
Cdd:COG4372 43 LQEELEQLREELEQA----REELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELE 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 926 ELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEEL 1005
Cdd:COG4372 119 ELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAEK 198
|
170 180 190
....*....|....*....|....*....|....*....
gi 2462579258 1006 EASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEALA 1044
Cdd:COG4372 199 EEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSA 237
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
497-1234 |
1.55e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 43.80 E-value: 1.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 497 LQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGaELQADLRDIQEEKEEIQKKLSES 576
Cdd:TIGR00618 208 LCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLK-QLRARIEELRAQEAVLEETQERI 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 577 RHQQEAATTQLEQLHQEAKRQEevLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQ 656
Cdd:TIGR00618 287 NRARKAAPLAAHIKAVTQIEQQ--AQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVA 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 657 NSVIEVTKGQLEVQ--IQTVTQAKEVIQGEVRCLKLELDTERSQAEQE--RDAAARQLAQ--AEQEGKTALEQQKAAHEK 730
Cdd:TIGR00618 365 TSIREISCQQHTLTqhIHTLQQQKTTLTQKLQSLCKELDILQREQATIdtRTSAFRDLQGqlAHAKKQQELQQRYAELCA 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 731 EVNQLREKWEKERSWHQQELAKALESLEREKMELEMrLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLET 810
Cdd:TIGR00618 445 AAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQ-IHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNP 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 811 LLQTQKeladasqqLERLRQDMKVQKLKEQETTGILQTQLQEAQReLKEAARQHRDDLAALQEESSSLLQDKMDLQKQVE 890
Cdd:TIGR00618 524 GPLTRR--------MQRGEQTYAQLETSEEDVYHQLTSERKQRAS-LKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITV 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 891 DLKSQLVAQD---DSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEaDSIRQQELSALRQDMQ 967
Cdd:TIGR00618 595 RLQDLTEKLSeaeDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQ-ERVREHALSIRVLPKE 673
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 968 EAQGEQKELSAQMELLRQEVKEKEADFLAQEA--QLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEALAA 1045
Cdd:TIGR00618 674 LLASRQLALQKMQSEKEQLTYWKEMLAQCQTLlrELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQAR 753
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1046 EQQPGNQAQAQAQLASLYSALQQALGSVCESRPELSGGGDSAPSVWGLEPDQNGARSLFKRGPLLTALSAEAVASALHKL 1125
Cdd:TIGR00618 754 TVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQF 833
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1126 HQDLWKTQQTRDVLRDQVQKLEERltdteaekSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELME--LHETMASLQ 1203
Cdd:TIGR00618 834 LSRLEEKSATLGEITHQLLKYEEC--------SKQLAQLTQEQAKIIQLSDKLNGINQIKIQFDGDALIkfLHEITLYAN 905
|
730 740 750
....*....|....*....|....*....|.
gi 2462579258 1204 SRLRRAELQRMEAQGERELLQAAKENLTAQV 1234
Cdd:TIGR00618 906 VRLANQSEGRFHGRYADSHVNARKYQGLALL 936
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1608-1829 |
1.58e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1608 LRDKEKEVECQQEHIHELQELKDQLEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQEAREQGELKEQSLQSQLDEAQR 1687
Cdd:COG4942 36 IAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRALYR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1688 ALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEqahmtlkerhgELQDHKEQARRLEEELAVEGRRVQALEEVLG 1767
Cdd:COG4942 116 LGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAE-----------ELRADLAELAALRAELEAERAELEALLAELE 184
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462579258 1768 DLRAESREQEKALLALQQQCAEQAQEHEVETRALQDSWLQAQAVLKERDQELEALRAESQSS 1829
Cdd:COG4942 185 EERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1924-2201 |
2.01e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 43.52 E-value: 2.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1924 RDEELRHQQEREQLLE---KSLAQRVQENMIQEKQNLGQ-EREEEEIRGLHQSVRELQLTLAQKEQEILEL-RETQQRNN 1998
Cdd:TIGR02169 207 REKAERYQALLKEKREyegYELLKEKEALERQKEAIERQlASLEEELEKLTEEISELEKRLEEIEQLLEELnKKIKDLGE 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1999 LEALPHSHKTSPMEEQSLKLDSLEPRLQRELERLQAALRQTEAR------EIE-WREKAQDLALSLAQTKASVSSLQEVA 2071
Cdd:TIGR02169 287 EEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEidkllaEIEeLEREIEEERKRRDKLTEEYAELKEEL 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 2072 MFLQASVLERDSEQQRLQDELELTRRALEK-ERLHSPGATSTAELGSRGEQGVQLG-----EVSGVEAEPSPDGMEKQSW 2145
Cdd:TIGR02169 367 EDLRAELEEVDKEFAETRDELKDYREKLEKlKREINELKRELDRLQEELQRLSEELadlnaAIAGIEAKINELEEEKEDK 446
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2462579258 2146 RQRLEHLQQAVARLEIDRSRLQRHNVQLRSTLEQVERERRKLKREAMRA-AQAGSLE 2201
Cdd:TIGR02169 447 ALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAeAQARASE 503
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
770-1350 |
2.24e-03 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 43.25 E-value: 2.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 770 EQQTEMEAIQAQREEERTQAESALCQMQL--------ETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLK--- 838
Cdd:PRK10246 217 QVQSLTASLQVLTDEEKQLLTAQQQQQQSlnwltrldELQQEASRRQQALQQALAAEEKAQPQLAALSLAQPARQLRphw 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 839 ---EQETTGILQT--QLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLqkqvedlkSQLVAQDDSQRLVEQEV--- 910
Cdd:PRK10246 297 eriQEQSAALAHTrqQIEEVNTRLQSTMALRARIRHHAAKQSAELQAQQQSL--------NTWLAEHDRFRQWNNELagw 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 911 ----QEKLRETQEYNRIQKEL---EREKASL---TLSLMEKE---------------QRLLVLQEADSIRQQELSALRQD 965
Cdd:PRK10246 369 raqfSQQTSDREQLRQWQQQLthaEQKLNALpaiTLTLTADEvaaalaqhaeqrplrQRLVALHGQIVPQQKRLAQLQVA 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 966 MQEAQGEQKELSAQMELLRQEVKEKEADFL----------------AQEAQL----------------LEELEASHITEQ 1013
Cdd:PRK10246 449 IQNVTQEQTQRNAALNEMRQRYKEKTQQLAdvkticeqearikdleAQRAQLqagqpcplcgstshpaVEAYQALEPGVN 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1014 QLRasLWAQEAKAAQLQLRLRSTESQLEALAAEQQPGNQAQAQAQLASlySALQQALGSVCES-RPELSGGGDSAPSVWG 1092
Cdd:PRK10246 529 QSR--LDALEKEVKKLGEEGAALRGQLDALTKQLQRDESEAQSLRQEE--QALTQQWQAVCASlNITLQPQDDIQPWLDA 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1093 LEPDQNGARSLFKRGPLLTALSAEAvasalHKLHQDLWKTQQTRDVLRDQVQKLEERLTDTEAEKS-------------Q 1159
Cdd:PRK10246 605 QEEHERQLRLLSQRHELQGQIAAHN-----QQIIQYQQQIEQRQQQLLTALAGYALTLPQEDEEASwlatrqqeaqswqQ 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1160 VHTELQDLQRQLSQNQ-------EEKSKWEGKQNSLESELMELHETMASLQSRLrrAELQRMEAQgERELLQAAkenlTA 1232
Cdd:PRK10246 680 RQNELTALQNRIQQLTplletlpQSDDLPHSEETVALDNWRQVHEQCLSLHSQL--QTLQQQDVL-EAQRLQKA----QA 752
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1233 QVEHLQAAVVEARAQASAAGILEEDLRTARSALKlknEEVESERERAQALQEQGELKVAQGKALQ----------ENLAL 1302
Cdd:PRK10246 753 QFDTALQASVFDDQQAFLAALLDEETLTQLEQLK---QNLENQRQQAQTLVTQTAQALAQHQQHRpdgldltvtvEQIQQ 829
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 2462579258 1303 LTQTLAEREEEVETLRGQIQELEKQREMQKAALELLSLDLKKRNQEVD 1350
Cdd:PRK10246 830 ELAQLAQQLRENTTRQGEIRQQLKQDADNRQQQQALMQQIAQATQQVE 877
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
322-590 |
2.77e-03 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 42.75 E-value: 2.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 322 DTLAGQTVDLQgEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQlqgdsaqgqkeeqqeELHLAVRERERL 401
Cdd:COG0497 148 DAFAGLEELLE-EYREAYRAWRALKKELEELRADEAERARELDLLRFQLEELE---------------AAALQPGEEEEL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 402 QEmlmgleakQSESLSELITLREALESSHlegELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSAL 481
Cdd:COG0497 212 EE--------ERRRLSNAEKLREALQEAL---EALSGGEGGALDLLGQALRALERLAEYDPSLAELAERLESALIELEEA 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 482 NEALA--LDKVGLNQQLLQLEEEnqsvcsRMEAAEQARNALQVDLAE----AEKRREALweknthleAQLQKAEEAGAEL 555
Cdd:COG0497 281 ASELRryLDSLEFDPERLEEVEE------RLALLRRLARKYGVTVEEllayAEELRAEL--------AELENSDERLEEL 346
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 2462579258 556 QADLRDIQEEKEEIQKKLSESRHQ-----QEAATTQLEQL 590
Cdd:COG0497 347 EAELAEAEAELLEAAEKLSAARKKaakklEKAVTAELADL 386
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
887-1339 |
2.84e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.83 E-value: 2.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 887 KQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLslMEKEQRLLVLQEADSIRQQELSALRQDM 966
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEK--LEKLLQLLPLYQELEALEAELAELPERL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 967 QEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTESQLEALAAE 1046
Cdd:COG4717 149 EELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEE 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1047 QQPGNQAQAQAQLASLYSALQQALGsvcesrpelsgggdSAPSVWGLEPDQNGARSLFKRGPLLTALsaeaVASALHKLH 1126
Cdd:COG4717 229 LEQLENELEAAALEERLKEARLLLL--------------IAAALLALLGLGGSLLSLILTIAGVLFL----VLGLLALLF 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1127 QDLWKTQQTRDVLRDQVQKLEERLTDTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRL 1206
Cdd:COG4717 291 LLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQ 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1207 RRAELQRMEAQGERELLQAAKENLTAQVEhLQAAVVEARAQASAAGILEEDLRTARSALKLKNEEVESERERAQALQEQG 1286
Cdd:COG4717 371 EIAALLAEAGVEDEEELRAALEQAEEYQE-LKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELE 449
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2462579258 1287 ELKVAQGKALQENLALLT-QTLAEREEEVETLRGQIQELEKQREMQKAALELLS 1339
Cdd:COG4717 450 ELREELAELEAELEQLEEdGELAELLQELEELKAELRELAEEWAALKLALELLE 503
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
305-517 |
2.85e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 2.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 305 EEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQEAWRLRRVNVELQLQGDSAQGQK 384
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 385 EEQQEEL--HLAVRERERLQEMLMGLEAKQS--ESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSS 460
Cdd:COG4942 100 EAQKEELaeLLRALYRLGRQPPLALLLSPEDflDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2462579258 461 ENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQAR 517
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
|
| PTZ00491 |
PTZ00491 |
major vault protein; Provisional |
701-821 |
2.93e-03 |
|
major vault protein; Provisional
Pssm-ID: 240439 [Multi-domain] Cd Length: 850 Bit Score: 43.08 E-value: 2.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 701 QERDAAARQLAQA-EQEGKTALEQQKAAHEKEVNQLREKWEKERSwHQQELAKALESLEREKMELEMRLKEQQTEMEAIQ 779
Cdd:PTZ00491 662 KSQEAAARHQAELlEQEARGRLERQKMHDKAKAEEQRTKLLELQA-ESAAVESSGQSRAEALAEAEARLIEAEAEVEQAE 740
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 2462579258 780 AQREEERTQAESALCQMQLETEKE---RVSLLETLLQTQKELADA 821
Cdd:PTZ00491 741 LRAKALRIEAEAELEKLRKRQELEleyEQAQNELEIAKAKELADI 785
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
723-1046 |
3.20e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 43.02 E-value: 3.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 723 QQKAAHEKEVNQLREKWEKERSWHQqELAKALESLEREKMELEMRLKE----QQTEMEAIQAQREEERTQAESALCQMQL 798
Cdd:PRK04863 286 EEALELRRELYTSRRQLAAEQYRLV-EMARELAELNEAESDLEQDYQAasdhLNLVQTALRQQEKIERYQADLEELEERL 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 799 ETEKERVSLL-ETLLQTQKELADASQQLERLRQDMK--VQKLKEQETTGIlqtQLQEAQRELKEAARQ-HRDDLAAlqee 874
Cdd:PRK04863 365 EEQNEVVEEAdEQQEENEARAEAAEEEVDELKSQLAdyQQALDVQQTRAI---QYQQAVQALERAKQLcGLPDLTA---- 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 875 sssllqdkmdlqKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYN-----------RIQKELEREKASltlslmEKEQ 943
Cdd:PRK04863 438 ------------DNAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHsqfeqayqlvrKIAGEVSRSEAW------DVAR 499
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 944 RLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEaqlleELEASHITEQQLRASLWAQE 1023
Cdd:PRK04863 500 ELLRRLREQRHLAEQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDDED-----ELEQLQEELEARLESLSESV 574
|
330 340
....*....|....*....|...
gi 2462579258 1024 AKAAQLQLRLRSTESQLEALAAE 1046
Cdd:PRK04863 575 SEARERRMALRQQLEQLQARIQR 597
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
168-656 |
3.23e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.98 E-value: 3.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 168 LLTQSQKQNEDYEKMIKALRETVEILETNHTELMEHEASLSRNAQ----------EEKLSLQQVIKDITQVMVEEGDNIA 237
Cdd:COG4913 253 LLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELeelraelarlEAELERLEARLDALREELDELEAQI 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 238 QGSGHENSLELDSSIfsqfdyQDADKALTLVRSVLTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKl 317
Cdd:COG4913 333 RGNGGDRLEQLEREI------ERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEE- 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 318 tgERDTLAGQTVDLQGEVDSLSKERELLQK-----------AREELRQQLEV---------------LEQEAWRLrrvNV 371
Cdd:COG4913 406 --ALAEAEAALRDLRRELRELEAEIASLERrksniparllaLRDALAEALGLdeaelpfvgelievrPEEERWRG---AI 480
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 372 ELQLQG--------DSAQGQKEEQQEELHLAVR---ERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQ-- 438
Cdd:COG4913 481 ERVLGGfaltllvpPEHYAAALRWVNRLHLRGRlvyERVRTGLPDPERPRLDPDSLAGKLDFKPHPFRAWLEAELGRRfd 560
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 439 -EQTEVTAALARAEQSI--AELSSSENTL---KTEVADLRA------AAVKLSALNEALAldkvGLNQQLLQLEEENQSV 506
Cdd:COG4913 561 yVCVDSPEELRRHPRAItrAGQVKGNGTRhekDDRRRIRSRyvlgfdNRAKLAALEAELA----ELEEELAEAEERLEAL 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 507 CSRMEAAEQARNALQ---------VDLAEAEKRREALWEKNTHLEA---QLQKAEEAGAELQADLRDIQEEKEEIQKKLS 574
Cdd:COG4913 637 EAELDALQERREALQrlaeyswdeIDVASAEREIAELEAELERLDAssdDLAALEEQLEELEAELEELEEELDELKGEIG 716
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 575 ESRHQQEAATTQLEQLhqeAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQ 654
Cdd:COG4913 717 RLEKELEQAEEELDEL---QDRLEAAEDLARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAM 793
|
..
gi 2462579258 655 QQ 656
Cdd:COG4913 794 RA 795
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
396-1046 |
3.48e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 42.65 E-value: 3.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 396 RERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAA 475
Cdd:pfam02463 180 EETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQE 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 476 VKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQ-ARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAE 554
Cdd:pfam02463 260 IEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKsELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEE 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 555 LQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAE 634
Cdd:pfam02463 340 LEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLED 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 635 QLQGLSSAKELLESSLFEAqQQNSVIEVTKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAE 714
Cdd:pfam02463 420 LLKEEKKEELEILEEEEES-IELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEER 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 715 QEGKTALEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALC 794
Cdd:pfam02463 499 SQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGAR 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 795 QMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEE 874
Cdd:pfam02463 579 KLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGL 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 875 SSSLLQDKMDLQKQVEDLKSQLVAQDdsqrlvEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSI 954
Cdd:pfam02463 659 AEKSEVKASLSELTKELLEIQELQEK------AESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQD 732
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 955 RQQELSALRQdMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLR 1034
Cdd:pfam02463 733 KINEELKLLK-QKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELK 811
|
650
....*....|..
gi 2462579258 1035 STESQLEALAAE 1046
Cdd:pfam02463 812 EEAELLEEEQLL 823
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1152-1913 |
3.52e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.82 E-value: 3.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1152 DTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRLRRAELQRME----AQGERELLQAAK 1227
Cdd:PTZ00121 1080 DFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEearkAEDAKRVEIARK 1159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1228 ENLTAQVEHLQAAVVEARAQASAAGI---------LEEDLRTARSALKLKNEEVESERERAQALQEQGELKVAQGKALQE 1298
Cdd:PTZ00121 1160 AEDARKAEEARKAEDAKKAEAARKAEevrkaeelrKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDA 1239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1299 NLAlltqtlaeREEEVETLRGQIQELEKQREMQKAALELLSLDLKKRNQEVDLQQEQIQELEKCRSVLEhlpMAVQEREQ 1378
Cdd:PTZ00121 1240 EEA--------KKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEE---KKKADEAK 1308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1379 KLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLvtlECLALELEENHHKMECQQKLIKELEG 1458
Cdd:PTZ00121 1309 KKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEA---EAAEEKAEAAEKKKEEAKKKADAAKK 1385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1459 QRETQRVALthltlDLEERSQELQAQSSQIHDLESHSTVlARELQERDQEVKsqreQIEELQRQKEHltqdlERRDQELM 1538
Cdd:PTZ00121 1386 KAEEKKKAD-----EAKKKAEEDKKKADELKKAAAAKKK-ADEAKKKAEEKK----KADEAKKKAEE-----AKKADEAK 1450
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1539 LQKERIQVLEDQRTRQTKILEEDLEQIKLSLRERGRELTTQRQLMQERAEEGKGPSKAQRGSLEHMKLILRDKEKEVEcQ 1618
Cdd:PTZ00121 1451 KKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAK-K 1529
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1619 QEHIHELQELKDQLEQQLQGLHRKVGEtsllLSQREQEIVVLQQQLQEAREQGELKEQSLQSQLDEAQRALAQRDQELEA 1698
Cdd:PTZ00121 1530 AEEAKKADEAKKAEEKKKADELKKAEE----LKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEK 1605
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1699 LQQEQQQAQGQEERVKEKADALQGALEQAHMTLKERHGELQDHKEQARRLEEElavegRRVQALEEVlgdlRAESREQEK 1778
Cdd:PTZ00121 1606 KMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEE-----NKIKAAEEA----KKAEEDKKK 1676
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1779 AllalqqqcaEQAQEHEVETRALQDSwLQAQAVLKERDQELEALRAESQSSRHQEEAARARAEALQEALGKAhaalQGKE 1858
Cdd:PTZ00121 1677 A---------EEAKKAEEDEKKAAEA-LKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKE----AEED 1742
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 2462579258 1859 QHLLEQAELSRSLEASTATLQASLDACQAHSRQLEEALRIQEGEIQDQDLRYQED 1913
Cdd:PTZ00121 1743 KKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVD 1797
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
304-859 |
3.54e-03 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 42.87 E-value: 3.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 304 EEEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKEREL---LQKAREELRQQLEVLEQEAWRLRRVNV--------- 371
Cdd:PRK10246 215 PEQVQSLTASLQVLTDEEKQLLTAQQQQQQSLNWLTRLDELqqeASRRQQALQQALAAEEKAQPQLAALSLaqparqlrp 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 372 --ELQLQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQT---EVTAA 446
Cdd:PRK10246 295 hwERIQEQSAALAHTRQQIEEVNTRLQSTMALRARIRHHAAKQSAELQAQQQSLNTWLAEHDRFRQWNNELAgwrAQFSQ 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 447 LARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVG----LNQQLLQLEEENQSVCSRMEAAEQARNALQV 522
Cdd:PRK10246 375 QTSDREQLRQWQQQLTHAEQKLNALPAITLTLTADEVAAALAQHAeqrpLRQRLVALHGQIVPQQKRLAQLQVAIQNVTQ 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 523 DLAEA----EKRREALWEKNTHL---------EAQLQKAEEAGAELQA---------------------DLRDIQEEKEE 568
Cdd:PRK10246 455 EQTQRnaalNEMRQRYKEKTQQLadvkticeqEARIKDLEAQRAQLQAgqpcplcgstshpaveayqalEPGVNQSRLDA 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 569 IQKKLSESRHQQEAATTQLEQLHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQglssAKELLES 648
Cdd:PRK10246 535 LEKEVKKLGEEGAALRGQLDALTKQLQRDESEAQSLRQEEQALTQQWQAVCASLNITLQPQDDIQPWLD----AQEEHER 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 649 SLFEAQQQNSVievtKGQLEVQIQTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAA--------RQLAQAEQEGKTA 720
Cdd:PRK10246 611 QLRLLSQRHEL----QGQIAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQEDEEASwlatrqqeAQSWQQRQNELTA 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 721 LEQQKAAHEKEVNQLREK-----------WEKERSWHQQ--ELAKALESLEREKMELEMRLKEQQTEME-AIQAQREEER 786
Cdd:PRK10246 687 LQNRIQQLTPLLETLPQSddlphseetvaLDNWRQVHEQclSLHSQLQTLQQQDVLEAQRLQKAQAQFDtALQASVFDDQ 766
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2462579258 787 TQAESALCQ----MQLETEKERvslLETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKE 859
Cdd:PRK10246 767 QAFLAALLDeetlTQLEQLKQN---LENQRQQAQTLVTQTAQALAQHQQHRPDGLDLTVTVEQIQQELAQLAQQLRE 840
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
666-1018 |
3.54e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.45 E-value: 3.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 666 QLEVQIQTVTQAKEVIQGEVRCLK-----LELDTERSQAEQERDAAARQLAQAEQEGKT--ALEQQKAAHEKEVNQLREK 738
Cdd:COG4717 99 ELEEELEELEAELEELREELEKLEkllqlLPLYQELEALEAELAELPERLEELEERLEElrELEEELEELEAELAELQEE 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 739 WEKERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESALCQMQLETEKERVSLLETLL------ 812
Cdd:COG4717 179 LEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLliaaal 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 813 ---------------------------------QTQKELADASQQLERLRQDMKVQKLKEQETTGILQtQLQEAQRELKE 859
Cdd:COG4717 259 lallglggsllsliltiagvlflvlgllallflLLAREKASLGKEAEELQALPALEELEEEELEELLA-ALGLPPDLSPE 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 860 AARQHRDDLAALQEESSSLLQDKMDLQ-KQVEDLKSQLVAQDDSQRlvEQEVQEKLRETQEYNRIQKELEREKASLTLSL 938
Cdd:COG4717 338 ELLELLDRIEELQELLREAEELEEELQlEELEQEIAALLAEAGVED--EEELRAALEQAEEYQELKEELEELEEQLEELL 415
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 939 MEKEQRLLVLQEADsiRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRAS 1018
Cdd:COG4717 416 GELEELLEALDEEE--LEEELEELEEELEELEEELEELREELAELEAELEQLEEDGELAELLQELEELKAELRELAEEWA 493
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
547-871 |
3.60e-03 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 42.53 E-value: 3.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 547 KAEEAGAelqADLRDIQEEKEEIQKKLSESRHQ-----QEAATTQLEQLHQEAKRQ--EEVLARAVQEKEALVREKAAle 619
Cdd:PLN03229 422 KKREAVK---TPVRELEGEVEKLKEQILKAKESsskpsELALNEMIEKLKKEIDLEytEAVIAMGLQERLENLREEFS-- 496
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 620 vrlqavERDRQD------LAEQLQGLssaKELLESSLFEAQQQNSVievtKGQLEVqIQTVTQAKEVIQGEVRCLKLELD 693
Cdd:PLN03229 497 ------KANSQDqlmhpvLMEKIEKL---KDEFNKRLSRAPNYLSL----KYKLDM-LNEFSRAKALSEKKSKAEKLKAE 562
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 694 TERSQAEQERDAAARQLAQAEqegKTALEQQKAAHEKEVNQ-LREKWEKERSWHQQELAKALESLEREKMELEMRLKE-- 770
Cdd:PLN03229 563 INKKFKEVMDRPEIKEKMEAL---KAEVASSGASSGDELDDdLKEKVEKMKKEIELELAGVLKSMGLEVIGVTKKNKDta 639
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 771 QQTEMEAIQAQREEERTQAESALCQMQLETE-KERVSLL--ETLLQTQKELADASQQLERLRQdmkvqKLKEQETTGILQ 847
Cdd:PLN03229 640 EQTPPPNLQEKIESLNEEINKKIERVIRSSDlKSKIELLklEVAKASKTPDVTEKEKIEALEQ-----QIKQKIAEALNS 714
|
330 340
....*....|....*....|....
gi 2462579258 848 TQLQEAQRELKEAARQHRDDLAAL 871
Cdd:PLN03229 715 SELKEKFEELEAELAAARETAAES 738
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
465-649 |
3.91e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 42.31 E-value: 3.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 465 KTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRrEALWEKNTHL--- 541
Cdd:PHA02562 212 GENIARKQNKYDELVEEAKTIKAEIEELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQFQKV-IKMYEKGGVCptc 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 542 -------EAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAAT---TQLEQLHQ-------EAKRQEEVLARA 604
Cdd:PHA02562 291 tqqisegPDRITKIKDKLKELQHSLEKLDTAIDELEEIMDEFNEQSKKLLelkNKISTNKQslitlvdKAKKVKAAIEEL 370
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 2462579258 605 VQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESS 649
Cdd:PHA02562 371 QAEFVDNAEELAKLQDELDKIVKTKSELVKEKYHRGIVTDLLKDS 415
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
127-964 |
4.02e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.64 E-value: 4.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 127 LAKTQELEKEAHERSQELIQLKSQGDLEKAELQDRVTELSALLTQSQKQNEDYEKMIKALRE----------TVEILETN 196
Cdd:PRK04863 364 LEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQTRAIQYQQAVQALERakqlcglpdlTADNAEDW 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 197 HTELM--EHEASLSRNAQEEKLSLQQVIKDItqvmveegdniaqgsgHENSLELDSSIFSQFDYQDA-DKALTLVRSVLT 273
Cdd:PRK04863 444 LEEFQakEQEATEELLSLEQKLSVAQAAHSQ----------------FEQAYQLVRKIAGEVSRSEAwDVARELLRRLRE 507
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 274 RRRQA--VQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQkltgERDTLAGQTVDLQGEVDSLSKERELLQKAREE 351
Cdd:PRK04863 508 QRHLAeqLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLD----DEDELEQLQEELEARLESLSESVSEARERRMA 583
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 352 LRQQLEVLEQEAWRLRRVNVELQLQGDSAqgqkeeqqeelhlavrerERLQEMlMGLEAKQSESLSELItlrealeSSHL 431
Cdd:PRK04863 584 LRQQLEQLQARIQRLAARAPAWLAAQDAL------------------ARLREQ-SGEEFEDSQDVTEYM-------QQLL 637
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 432 EGEL-LRQEQTEVTAALARAEQSIAELSSSENTLKTEVADL--RAAAVKLSALNEALALDKVGLNQQLLQleeenqsvcs 508
Cdd:PRK04863 638 EREReLTVERDELAARKQALDEEIERLSQPGGSEDPRLNALaeRFGGVLLSEIYDDVSLEDAPYFSALYG---------- 707
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 509 rmeaaeQARNALQV-DLAEAEKRREALWEKNTHL---EAQLQKAEEAGAELQADLRDIQEEKEEIQKKLS----ESRHQQ 580
Cdd:PRK04863 708 ------PARHAIVVpDLSDAAEQLAGLEDCPEDLyliEGDPDSFDDSVFSVEELEKAVVVKIADRQWRYSrfpeVPLFGR 781
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 581 EAATTQLEQLHQEAkrqeevlaravqekEALVREKAALEVRLQAVERDRQDLaEQLQGLSSAKELL---ESSLFEAQQQN 657
Cdd:PRK04863 782 AAREKRIEQLRAER--------------EELAERYATLSFDVQKLQRLHQAF-SRFIGSHLAVAFEadpEAELRQLNRRR 846
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 658 SVIEVTKGQLEVQIQTVT----QAKEVIQGEVRCLKLELDTERSQAEQERDAAARQLAQAEQEGKTALEQQKAAH--EKE 731
Cdd:PRK04863 847 VELERALADHESQEQQQRsqleQAKEGLSALNRLLPRLNLLADETLADRVEEIREQLDEAEEAKRFVQQHGNALAqlEPI 926
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 732 VNQLREKWEK-ERSWHQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQRE-EERTQAESALCQMQLETEKERVSLLE 809
Cdd:PRK04863 927 VSVLQSDPEQfEQLKQDYQQAQQTQRDAKQQAFALTEVVQRRAHFSYEDAAEMlAKNSDLNEKLRQRLEQAEQERTRARE 1006
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 810 TLLQTQKELADASQQLERLRQ--DMKVQKLKEqettgiLQTQLQE----AQRELKEAARQHRDDLaalQEESSSLLQDKM 883
Cdd:PRK04863 1007 QLRQAQAQLAQYNQVLASLKSsyDAKRQMLQE------LKQELQDlgvpADSGAEERARARRDEL---HARLSANRSRRN 1077
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 884 DLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRE-TQEYNRIQKELEREKASLTLS-LMEKEQRLLVLQEADSIRQQELSA 961
Cdd:PRK04863 1078 QLEKQLTFCEAEMDNLTKKLRKLERDYHEMREQvVNAKAGWCAVLRLVKDNGVERrLHRRELAYLSADELRSMSDKALGA 1157
|
...
gi 2462579258 962 LRQ 964
Cdd:PRK04863 1158 LRL 1160
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1372-1601 |
4.13e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 4.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1372 AVQEREQKLTVQREQIRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLVTLECLALELEENHHKMECQQK 1451
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1452 LIKELEGQ--RETQRVALTHLTLDLEERSQELQAQSSQ--IHDLESHSTVLARELQERDQEVKSQREQIEELQRQKEHLT 1527
Cdd:COG4942 101 AQKEELAEllRALYRLGRQPPLALLLSPEDFLDAVRRLqyLKYLAPARREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2462579258 1528 QDLERRDQELMLQKERIQVLEDQRTRQTKILEEDLEQIKLSLRERGRELTTQRQLMQERAEEGK-GPSKAQRGSL 1601
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPaAGFAALKGKL 255
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1492-1585 |
4.58e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.15 E-value: 4.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1492 ESHSTVLARELQERDQEVKSQREQIEELQRQKEHLTQDLERRDQEL---------MLQKERIQVLEDqrtRQTKILEEDL 1562
Cdd:COG2433 398 EREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIerlerelseARSEERREIRKD---REISRLDREI 474
|
90 100
....*....|....*....|....*.
gi 2462579258 1563 EQIKLSL---RERGRELTTQRQLMQE 1585
Cdd:COG2433 475 ERLERELeeeRERIEELKRKLERLKE 500
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
274-1037 |
4.61e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 42.25 E-value: 4.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 274 RRRQAVQDLRQQLAGCQEAVNLLQQQHdqweeegKALRQRLQKLTGERDTLagqTVDLQGEVDSLSKERELLQKAREELR 353
Cdd:COG3096 282 ELSERALELRRELFGARRQLAEEQYRL-------VEMARELEELSARESDL---EQDYQAASDHLNLVQTALRQQEKIER 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 354 QQLEVLEQEAwRLRrvnvELQLQGDSAQGQKEEQQEELHLAVRERERLQEML----MGLEAKQSESLS---ELITLREAL 426
Cdd:COG3096 352 YQEDLEELTE-RLE----EQEEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLadyqQALDVQQTRAIQyqqAVQALEKAR 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 427 ESSHLEGelLRQEQTEVTAALARAEQSiaELSSSENTLKTEVADLRAAAVKLSALNEALAL--------DKVGLNQQLLQ 498
Cdd:COG3096 427 ALCGLPD--LTPENAEDYLAAFRAKEQ--QATEEVLELEQKLSVADAARRQFEKAYELVCKiageversQAWQTARELLR 502
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 499 LEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAG---AELQADLRDIQEEKEEIQKKLSE 575
Cdd:COG3096 503 RYRSQQALAQRLQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEellAELEAQLEELEEQAAEAVEQRSE 582
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 576 SRHQQEAATTQLEQLHQEA----------KRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGL-SSAKE 644
Cdd:COG3096 583 LRQQLEQLRARIKELAARApawlaaqdalERLREQSGEALADSQEVTAAMQQLLEREREATVERDELAARKQALeSQIER 662
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 645 LLESSLFEAQQQNSVIEVTKGQLEVQIQ---TVTQAK--EVIQGEVRCLKLELDTERSQA---------------EQERD 704
Cdd:COG3096 663 LSQPGGAEDPRLLALAERLGGVLLSEIYddvTLEDAPyfSALYGPARHAIVVPDLSAVKEqlagledcpedlyliEGDPD 742
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 705 AAARQLAQAEQEGKTALEQQ-----------------KAAHEKEVNQLREKWEK------ERSWHQQELAKALESLER-- 759
Cdd:COG3096 743 SFDDSVFDAEELEDAVVVKLsdrqwrysrfpevplfgRAAREKRLEELRAERDElaeqyaKASFDVQKLQRLHQAFSQfv 822
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 760 ---------EKMELEMR-LKEQQTEMEAIQAQREEERTQAESALCQMqleteKERVSLLETLLQTQKELADAS--QQLER 827
Cdd:COG3096 823 gghlavafaPDPEAELAaLRQRRSELERELAQHRAQEQQLRQQLDQL-----KEQLQLLNKLLPQANLLADETlaDRLEE 897
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 828 LRQDMkvqklkeqettgilqTQLQEAQRELK---EAARQHRDDLAALQ---EESSSLLQDKMDLQKQVEDLKSQLVA--- 898
Cdd:COG3096 898 LREEL---------------DAAQEAQAFIQqhgKALAQLEPLVAVLQsdpEQFEQLQADYLQAKEQQRRLKQQIFAlse 962
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 899 ----------QDDSQRLVE-QEVQEKLRETQEynriQKELEREKASLTLSLMEKE--QRLLVLQEADSIRQqelsALRQD 965
Cdd:COG3096 963 vvqrrphfsyEDAVGLLGEnSDLNEKLRARLE----QAEEARREAREQLRQAQAQysQYNQVLASLKSSRD----AKQQT 1034
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2462579258 966 MQEAQGEQKELSAQMEllrqevKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRSTE 1037
Cdd:COG3096 1035 LQELEQELEELGVQAD------AEAEERARIRRDELHEELSQNRSRRSQLEKQLTRCEAEMDSLQKRLRKAE 1100
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
1737-2115 |
5.30e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.25 E-value: 5.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1737 ELQDHKEQARRLEEELAVEGRRVQALEEVLGDLRAESREQEKALLALQQQ----------------CAEQAQEHEVETRA 1800
Cdd:PRK04863 280 ERRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDyqaasdhlnlvqtalrQQEKIERYQADLEE 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1801 LQDSWLQAQAVLKERDQELEALRAESQSSRHQEEAARARAEALQEAL-------GKAHAALQG--KEQHLLEQAELS-RS 1870
Cdd:PRK04863 360 LEERLEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALdvqqtraIQYQQAVQAleRAKQLCGLPDLTaDN 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1871 LEASTATLQASLDACQAHSRQLEEALRIQEGEIQDQDLRYQ-----------EDVQQLQQALAQRDEELRHQQEREQLLE 1939
Cdd:PRK04863 440 AEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQlvrkiagevsrSEAWDVARELLRRLREQRHLAEQLQQLR 519
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1940 KSLAQRvqenmiqeKQNLGQEREEEEIRGLHQSVRELQLTLAQKEQEILELRETQqrnnLEALphshktspmEEQSLKLD 2019
Cdd:PRK04863 520 MRLSEL--------EQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEAR----LESL---------SESVSEAR 578
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 2020 SLEPRLQRELERLQAALRQTEAREIEWREKAQDLALSLAQTKASVSSLQEVAMFLQAsVLERDSEQQRLQDELELTRRAL 2099
Cdd:PRK04863 579 ERRMALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQDVTEYMQQ-LLERERELTVERDELAARKQAL 657
|
410
....*....|....*...
gi 2462579258 2100 EK--ERLHSPGATSTAEL 2115
Cdd:PRK04863 658 DEeiERLSQPGGSEDPRL 675
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
395-763 |
5.66e-03 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 41.59 E-value: 5.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 395 VRERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAA 474
Cdd:pfam19220 40 LRELPQAKSRLLELEALLAQERAAYGKLRRELAGLTRRLSAAEGELEELVARLAKLEAALREAEAAKEELRIELRDKTAQ 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 475 AvklsalnEALALDKVGLNQQLLQLEEENQSVCSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAE 554
Cdd:pfam19220 120 A-------EALERQLAAETEQNRALEEENKALREEAQAAEKALQRAEGELATARERLALLEQENRRLQALSEEQAAELAE 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 555 LQADLRDIQEEKEEIQKKLSEsrhqQEAATTQLEQLHQEAKRQ-EEVLARAVQEKEALVREKAALEVRLQAVERDRQDLA 633
Cdd:pfam19220 193 LTRRLAELETQLDATRARLRA----LEGQLAAEQAERERAEAQlEEAVEAHRAERASLRMKLEALTARAAATEQLLAEAR 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 634 EQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKeviqgevrclkLELDTERSQAEQERDAAARQLAQA 713
Cdd:pfam19220 269 NQLRDRDEAIRAAERRLKEASIERDTLERRLAGLEADLERRTQQF-----------QEMQRARAELEERAEMLTKALAAK 337
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 2462579258 714 EQEGKTAlEQQKAAHEKEVNQLREKWEKERSWHQQELAKALESLEREKME 763
Cdd:pfam19220 338 DAALERA-EERIASLSDRIAELTKRFEVERAALEQANRRLKEELQRERAE 386
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1712-1934 |
6.72e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 6.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1712 RVKEKADALQGALEqahmTLKERHGELQDHKEQARRLE------EELAVEGRRVQALEEVLGDLRAESREQEKALLAlqq 1785
Cdd:COG4913 222 DTFEAADALVEHFD----DLERAHEALEDAREQIELLEpirelaERYAAARERLAELEYLRAALRLWFAQRRLELLE--- 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1786 qcaEQAQEHEVETRALQDSWLQAQAVLKERDQELEALRAESQSSRHQEEAAraraeaLQEALGKAHAALQGKEQHLLEQA 1865
Cdd:COG4913 295 ---AELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQ------LEREIERLERELEERERRRARLE 365
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2462579258 1866 ELSRSLEASTATLQASLDACQAHSRQLEEALRIQEGEIQDQDLRYQEDVQQLQQALAQRDEELRHQQER 1934
Cdd:COG4913 366 ALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERR 434
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
590-929 |
6.83e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.87 E-value: 6.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 590 LHQEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESslfEAQQQNSVIEVTKgQLEV 669
Cdd:PRK04863 291 LRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLVQTALRQQEK---IERYQADLEELEE-RLEE 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 670 QIQTVTQAKEViqgevrclKLELDTERSQAEQERDAAARQLAQAEQegktALE-QQKAAheKEVNQLREKWEKERSW--- 745
Cdd:PRK04863 367 QNEVVEEADEQ--------QEENEARAEAAEEEVDELKSQLADYQQ----ALDvQQTRA--IQYQQAVQALERAKQLcgl 432
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 746 ---HQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEeRTQAESALCQMQLETEKER-----VSLLETLlQTQKE 817
Cdd:PRK04863 433 pdlTADNAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHSQ-FEQAYQLVRKIAGEVSRSEawdvaRELLRRL-REQRH 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 818 LADASQQLErlrqdmkvQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLV 897
Cdd:PRK04863 511 LAEQLQQLR--------MRLSELEQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRM 582
|
330 340 350
....*....|....*....|....*....|..
gi 2462579258 898 AQDDSQRLVEQEVQEKLRETQEYNRIQKELER 929
Cdd:PRK04863 583 ALRQQLEQLQARIQRLAARAPAWLAAQDALAR 614
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1449-1712 |
6.93e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 41.65 E-value: 6.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1449 QQKLIKELEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQERDQEVKSQREQIEELQR-QKEHLT 1527
Cdd:pfam17380 280 HQKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAMERERELERiRQEERK 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1528 QDLER-RDQELMLQKERIQVLEDQRTRQTKILEEDLEQIKLSLRERGRELTTQRQLMQERAEEGKGPSKAQRGSLEHMKL 1606
Cdd:pfam17380 360 RELERiRQEEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRR 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1607 ILRDKEKEVECQQEHIHELQELKDQLEQQLQGLHRKVGETSLLLSQR----EQEIVVLQQQLQEARE---QGELKEQSLQ 1679
Cdd:pfam17380 440 LEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKLELEKEKRDRkraeEQRRKILEKELEERKQamiEEERKRKLLE 519
|
250 260 270
....*....|....*....|....*....|...
gi 2462579258 1680 SQLDEAQRALAQRDQELEALQQEQQQAQGQEER 1712
Cdd:pfam17380 520 KEMEERQKAIYEEERRREAEEERRKQQEMEERR 552
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
379-576 |
8.40e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 8.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 379 SAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAELS 458
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 459 SSENTLKTEVADLRAAAVKLSALN--------------------------------EALALDKVGLNQQLLQLEEENQSV 506
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQPplalllspedfldavrrlqylkylaparreqaEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 507 CSRMEAAEQARNALQVDLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSES 576
Cdd:COG4942 177 EALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
900-1046 |
8.44e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 41.30 E-value: 8.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 900 DDSQRLVEQEVQEKLRETQ-EYNRIQKELEREKASLTLSLMEKEQRLlvLQEADSIRqQELSALRQDMQEAQGEQKELSA 978
Cdd:PRK12704 45 EEAKKEAEAIKKEALLEAKeEIHKLRNEFEKELRERRNELQKLEKRL--LQKEENLD-RKLELLEKREEELEKKEKELEQ 121
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2462579258 979 QMEllrqEVKEKEADFLAQEAQLLEELEasHIteqqlrASLWAQEAKaaqlQLRLRSTESQLEALAAE 1046
Cdd:PRK12704 122 KQQ----ELEKKEEELEELIEEQLQELE--RI------SGLTAEEAK----EILLEKVEEEARHEAAV 173
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
674-803 |
8.59e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 41.35 E-value: 8.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 674 VTQAKEVIQGEVrcLKLE-----LDTERSQAEQERDAAARQLAQAEQEgKTALEQQKaahekevNQLREKWEKERSWHQQ 748
Cdd:PRK00409 504 IEEAKKLIGEDK--EKLNeliasLEELERELEQKAEEAEALLKEAEKL-KEELEEKK-------EKLQEEEDKLLEEAEK 573
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 2462579258 749 ELAKALESLEREKMELEMRLKEQQTEMEAiqAQREEERTQAESALCQMQLETEKE 803
Cdd:PRK00409 574 EAQQAIKEAKKEADEIIKELRQLQKGGYA--SVKAHELIEARKRLNKANEKKEKK 626
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
702-1356 |
8.81e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.48 E-value: 8.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 702 ERDAAARQLAQAEQEGKTALEQQKAAHEKEVNQLREKWEKERSwhQQELAKALESLE------------REKM------- 762
Cdd:COG3096 279 ERRELSERALELRRELFGARRQLAEEQYRLVEMARELEELSAR--ESDLEQDYQAASdhlnlvqtalrqQEKIeryqedl 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 763 -ELEMRLKEQQTEMEAIQAQREEERTQAEsaLCQMQLETEKERVSLLETLLQTQKELADASQQ-LERLRQDMKVQKLKE- 839
Cdd:COG3096 357 eELTERLEEQEEVVEEAAEQLAEAEARLE--AAEEEVDSLKSQLADYQQALDVQQTRAIQYQQaVQALEKARALCGLPDl 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 840 -----QETTGILQTQLQEAQREL----------KEAARQHRDDLAALQ------------EESSSLLQDKMDLQ---KQV 889
Cdd:COG3096 435 tpenaEDYLAAFRAKEQQATEEVleleqklsvaDAARRQFEKAYELVCkiageversqawQTARELLRRYRSQQalaQRL 514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 890 EDLKSQLvaQDDSQRLVEQEVQEKLREtqEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEA 969
Cdd:COG3096 515 QQLRAQL--AELEQRLRQQQNAERLLE--EFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQL 590
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 970 QGEQKELSAQ----------MELLRQEVKEKEAD---FLAQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLRLRST 1036
Cdd:COG3096 591 RARIKELAARapawlaaqdaLERLREQSGEALADsqeVTAAMQQLLEREREATVERDELAARKQALESQIERLSQPGGAE 670
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1037 ESQLEALA--------AEQQPGNQAQAQAQLASLYSALQQAL--GSVCESRPELSGGGDSAPSVWGLEPD---------- 1096
Cdd:COG3096 671 DPRLLALAerlggvllSEIYDDVTLEDAPYFSALYGPARHAIvvPDLSAVKEQLAGLEDCPEDLYLIEGDpdsfddsvfd 750
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1097 ----------QNGAR----SLFKRGPLLTALSAEAVASALHKLHQDLWKTQQTRDVLRDQVQKLEERLT----------- 1151
Cdd:COG3096 751 aeeledavvvKLSDRqwrySRFPEVPLFGRAAREKRLEELRAERDELAEQYAKASFDVQKLQRLHQAFSqfvgghlavaf 830
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1152 --DTEAEKSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETM--------ASLQSRLRRAELQRMEAQGERE 1221
Cdd:COG3096 831 apDPEAELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQLQLLNKLLpqanlladETLADRLEELREELDAAQEAQA 910
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1222 LLQAAKENLT-------------AQVEHLQAAVVEARAQ-----------------------ASAAGILEEDlRTARSAL 1265
Cdd:COG3096 911 FIQQHGKALAqleplvavlqsdpEQFEQLQADYLQAKEQqrrlkqqifalsevvqrrphfsyEDAVGLLGEN-SDLNEKL 989
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 1266 KLKNEEVESERERA------------QALQEQGELKVAQGkALQENLALLTQTLA-------------------EREEEV 1314
Cdd:COG3096 990 RARLEQAEEARREAreqlrqaqaqysQYNQVLASLKSSRD-AKQQTLQELEQELEelgvqadaeaeerarirrdELHEEL 1068
|
810 820 830 840
....*....|....*....|....*....|....*....|..
gi 2462579258 1315 ETLRGQIQELEKQREMQKAALELLSLDLKKRNQEVDLQQEQI 1356
Cdd:COG3096 1069 SQNRSRRSQLEKQLTRCEAEMDSLQKRLRKAERDYKQEREQV 1110
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
124-709 |
8.81e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 41.26 E-value: 8.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 124 LLLLAKTQELEKEAHERSQELIQLKSQGDLEKAELQDRVTELSALLTQSQKQNEDYEKMIKALRETVEILETnhtELMEH 203
Cdd:pfam15921 260 LLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRS---ELREA 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 204 EASLSRNAQEEKLSLQQVIKDITQVMVEEgDNIAQGSGHensleLDSSIFSQF-DYQDADKALTLvrsvltrRRQAVQDL 282
Cdd:pfam15921 337 KRMYEDKIEELEKQLVLANSELTEARTER-DQFSQESGN-----LDDQLQKLLaDLHKREKELSL-------EKEQNKRL 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 283 RQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGE-RDTLAGQTVDLQGEVDSLSK----------ERELLQKAREE 351
Cdd:pfam15921 404 WDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSEcQGQMERQMAAIQGKNESLEKvssltaqlesTKEMLRKVVEE 483
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 352 LRQQLEVLEQEAWRLRRVNVELQlQGDSAQGQKEEQQEELHLAVRERERLQEMLMGLEAKQSESLSELITLREALESSHL 431
Cdd:pfam15921 484 LTAKKMTLESSERTVSDLTASLQ-EKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALKLQMAEKDK 562
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 432 EGELLRQEQTEVTAALARAEQSIAELSSSENTLKTEVADLRAAAVKLSALNEALALDKVGLNQQLLQLEEENQSVCSrmE 511
Cdd:pfam15921 563 VIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVN--A 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 512 AAEQARNalqvdLAEAEKRREALWEKNTHLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLsesRHQQEAATTQLEQLH 591
Cdd:pfam15921 641 GSERLRA-----VKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKL---KMQLKSAQSELEQTR 712
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 592 QEAKRQEEVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQQQNSVIEVTKGQLEVQI 671
Cdd:pfam15921 713 NTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGEL 792
|
570 580 590
....*....|....*....|....*....|....*...
gi 2462579258 672 QTVTQAKEVIQGEVRCLKLELDTERSQAEQERDAAARQ 709
Cdd:pfam15921 793 EVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQ 830
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
662-829 |
9.94e-03 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 40.42 E-value: 9.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 662 VTKGQLEVQIQTVtqakeviqgevrclklELDTERSQAEQERDAAARQLAQAEQEgkTALEQQKAAHEKEVNQLREKWEK 741
Cdd:COG1566 67 VKKGQVLARLDPT----------------DLQAALAQAEAQLAAAEAQLARLEAE--LGAEAEIAAAEAQLAAAQAQLDL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462579258 742 erswhQQELAKALESLEREKMELEMRLKEQQTEMEAIQAQREEERTQAESAlcQMQLETEKERVSLLETLLQTQKELADA 821
Cdd:COG1566 129 -----AQRELERYQALYKKGAVSQQELDEARAALDAAQAQLEAAQAQLAQA--QAGLREEEELAAAQAQVAQAEAALAQA 201
|
....*...
gi 2462579258 822 SQQLERLR 829
Cdd:COG1566 202 ELNLARTT 209
|
|
| |
