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Conserved domains on  [gi|2238871968|ref|XP_048053003|]
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protein O-glucosyltransferase 1 isoform X1 [Megalobrama amblycephala]

Protein Classification

glycosyltransferase family protein( domain architecture ID 581341)

glycosyltransferase family protein may synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Glyco_transf_90 super family cl23835
Glycosyl transferase family 90; This family of glycosyl transferases are specifically ...
 46-380 2.59e-128

Glycosyl transferase family 90; This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.


The actual alignment was detected with superfamily member pfam05686:

Pssm-ID: 329112  Cd Length: 396  Bit Score: 374.51  E-value: 2.59e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2238871968  46 CSQENCSCHLSVLNNDLRPFKngiSEGLMADTVQRGV---GTHYQIIGNKLYREQ-SCMFPAR----CSGVEHFILKVIN 117
Cdd:pfam05686   1 SSSPTCPDYFRWIHEDLEPWR---ETGITREMVERAKrkaHFRYVIINGRVYVETyGESFQTRdvftIWGILQLLRKYPG 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2238871968 118 RLPDMEMVINVRDYPQVPRW-----VQPVLPVLSFSKTLDYQDIMYPAWTFWEggpavWPiyPTGLGRWDLMRDDLKKSA 192
Cdd:pfam05686  78 RLPDLELMFNCGDWPVVKKRdyrgpNANPPPLFSYCGDDDTLDIVFPDWSFWG-----WP--EVNIGRWDLLRKDLKEGN 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2238871968 193 ARWPWKKKSPKGFFRGSRTSSE-RDPLILLSREAPDLVDAEYTKNqawksEKDTLGRSPAKEIPLVEHCEYKYLFNFRGV 271
Cdd:pfam05686 151 TRVKWEDREPYAYWRGNPSVAEtRLELVKCNRSNPEDWDARLTNQ-----DWDTEYRPGFKHSSLVDQCTHKYKIYIEGV 225

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2238871968 272 AASFRLKHLFLCGSLVFHVGEEWLEFFYSQLKPWVHYIPVK--QDLSDLRELLQFVKENDAVAEEIAVRGQTFILEHLRM 349
Cdd:pfam05686 226 AWSVSLKYILACDSLVLHVGPEYYDFFYRGLKPWVHYWPIKsdDDCRDLKEAVDWGNAHDDEAQKIAERGSEFIRENLKM 305

                         330       340       350
                  ....*....|....*....|....*....|.
gi 2238871968 350 EDVSCYWERLLTDFSKLLKYKPKRKSNYNQI 380
Cdd:pfam05686 306 DDVYDYMFHLLTEYAKLLKYKPTVPKGAVEV 336
 
Name Accession Description Interval E-value
Glyco_transf_90 pfam05686
Glycosyl transferase family 90; This family of glycosyl transferases are specifically ...
 46-380 2.59e-128

Glycosyl transferase family 90; This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.


Pssm-ID: 310354  Cd Length: 396  Bit Score: 374.51  E-value: 2.59e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2238871968  46 CSQENCSCHLSVLNNDLRPFKngiSEGLMADTVQRGV---GTHYQIIGNKLYREQ-SCMFPAR----CSGVEHFILKVIN 117
Cdd:pfam05686   1 SSSPTCPDYFRWIHEDLEPWR---ETGITREMVERAKrkaHFRYVIINGRVYVETyGESFQTRdvftIWGILQLLRKYPG 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2238871968 118 RLPDMEMVINVRDYPQVPRW-----VQPVLPVLSFSKTLDYQDIMYPAWTFWEggpavWPiyPTGLGRWDLMRDDLKKSA 192
Cdd:pfam05686  78 RLPDLELMFNCGDWPVVKKRdyrgpNANPPPLFSYCGDDDTLDIVFPDWSFWG-----WP--EVNIGRWDLLRKDLKEGN 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2238871968 193 ARWPWKKKSPKGFFRGSRTSSE-RDPLILLSREAPDLVDAEYTKNqawksEKDTLGRSPAKEIPLVEHCEYKYLFNFRGV 271
Cdd:pfam05686 151 TRVKWEDREPYAYWRGNPSVAEtRLELVKCNRSNPEDWDARLTNQ-----DWDTEYRPGFKHSSLVDQCTHKYKIYIEGV 225

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2238871968 272 AASFRLKHLFLCGSLVFHVGEEWLEFFYSQLKPWVHYIPVK--QDLSDLRELLQFVKENDAVAEEIAVRGQTFILEHLRM 349
Cdd:pfam05686 226 AWSVSLKYILACDSLVLHVGPEYYDFFYRGLKPWVHYWPIKsdDDCRDLKEAVDWGNAHDDEAQKIAERGSEFIRENLKM 305

                         330       340       350
                  ....*....|....*....|....*....|.
gi 2238871968 350 EDVSCYWERLLTDFSKLLKYKPKRKSNYNQI 380
Cdd:pfam05686 306 DDVYDYMFHLLTEYAKLLKYKPTVPKGAVEV 336
CAP10 smart00672
Putative lipopolysaccharide-modifying enzyme;
118-370 4.98e-95

Putative lipopolysaccharide-modifying enzyme;


Pssm-ID: 214773  Cd Length: 256  Bit Score: 284.70  E-value: 4.98e-95
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2238871968  118 RLPDMEMVINVRDYPQV------PRWVQPVLPVLSFSKTLDYQDIMYPAWTFWEGgpavwpiYPTGLGR-WDLMRDDLKK 190
Cdd:smart00672   1 RVPDLELMFNCRDWPLInkksfaSYNQHAPPPLFSYCGSDEYLDIVFPDWSFWAG-------WPEVNGRpWDKDLMELEE 73

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2238871968  191 SAARWPWKKKSPKGFFRGSRTS-SERDPLILLSREAPDLVDAEYTKNQAWKSEKDTLGRSPAKEIPLVEHCEYKYLFNFR 269
Cdd:smart00672  74 GNKRTKWSDKNAYAYWRGNPTVaSERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIE 153

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2238871968  270 GVAASFRLKHLFLCGSLVFHVGEEWLEFFYSQLKPWVHYIPVKQDLSD--LRELLQFVKENDAVAEEIAVRGQTFILEHL 347
Cdd:smart00672 154 GVAWSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCreLKEAVDWGNEHDKKAQEIGKRGSEFIQQNL 233

                          250       260
                   ....*....|....*....|...
gi 2238871968  348 RMEDVSCYWERLLTDFSKLLKYK 370
Cdd:smart00672 234 SMEDVYDYMFHLLQEYAKLLKYK 256
 
Name Accession Description Interval E-value
Glyco_transf_90 pfam05686
Glycosyl transferase family 90; This family of glycosyl transferases are specifically ...
 46-380 2.59e-128

Glycosyl transferase family 90; This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.


Pssm-ID: 310354  Cd Length: 396  Bit Score: 374.51  E-value: 2.59e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2238871968  46 CSQENCSCHLSVLNNDLRPFKngiSEGLMADTVQRGV---GTHYQIIGNKLYREQ-SCMFPAR----CSGVEHFILKVIN 117
Cdd:pfam05686   1 SSSPTCPDYFRWIHEDLEPWR---ETGITREMVERAKrkaHFRYVIINGRVYVETyGESFQTRdvftIWGILQLLRKYPG 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2238871968 118 RLPDMEMVINVRDYPQVPRW-----VQPVLPVLSFSKTLDYQDIMYPAWTFWEggpavWPiyPTGLGRWDLMRDDLKKSA 192
Cdd:pfam05686  78 RLPDLELMFNCGDWPVVKKRdyrgpNANPPPLFSYCGDDDTLDIVFPDWSFWG-----WP--EVNIGRWDLLRKDLKEGN 150

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2238871968 193 ARWPWKKKSPKGFFRGSRTSSE-RDPLILLSREAPDLVDAEYTKNqawksEKDTLGRSPAKEIPLVEHCEYKYLFNFRGV 271
Cdd:pfam05686 151 TRVKWEDREPYAYWRGNPSVAEtRLELVKCNRSNPEDWDARLTNQ-----DWDTEYRPGFKHSSLVDQCTHKYKIYIEGV 225

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2238871968 272 AASFRLKHLFLCGSLVFHVGEEWLEFFYSQLKPWVHYIPVK--QDLSDLRELLQFVKENDAVAEEIAVRGQTFILEHLRM 349
Cdd:pfam05686 226 AWSVSLKYILACDSLVLHVGPEYYDFFYRGLKPWVHYWPIKsdDDCRDLKEAVDWGNAHDDEAQKIAERGSEFIRENLKM 305

                         330       340       350
                  ....*....|....*....|....*....|.
gi 2238871968 350 EDVSCYWERLLTDFSKLLKYKPKRKSNYNQI 380
Cdd:pfam05686 306 DDVYDYMFHLLTEYAKLLKYKPTVPKGAVEV 336
CAP10 smart00672
Putative lipopolysaccharide-modifying enzyme;
118-370 4.98e-95

Putative lipopolysaccharide-modifying enzyme;


Pssm-ID: 214773  Cd Length: 256  Bit Score: 284.70  E-value: 4.98e-95
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2238871968  118 RLPDMEMVINVRDYPQV------PRWVQPVLPVLSFSKTLDYQDIMYPAWTFWEGgpavwpiYPTGLGR-WDLMRDDLKK 190
Cdd:smart00672   1 RVPDLELMFNCRDWPLInkksfaSYNQHAPPPLFSYCGSDEYLDIVFPDWSFWAG-------WPEVNGRpWDKDLMELEE 73

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2238871968  191 SAARWPWKKKSPKGFFRGSRTS-SERDPLILLSREAPDLVDAEYTKNQAWKSEKDTLGRSPAKEIPLVEHCEYKYLFNFR 269
Cdd:smart00672  74 GNKRTKWSDKNAYAYWRGNPTVaSERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIE 153

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2238871968  270 GVAASFRLKHLFLCGSLVFHVGEEWLEFFYSQLKPWVHYIPVKQDLSD--LRELLQFVKENDAVAEEIAVRGQTFILEHL 347
Cdd:smart00672 154 GVAWSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCreLKEAVDWGNEHDKKAQEIGKRGSEFIQQNL 233

                          250       260
                   ....*....|....*....|...
gi 2238871968  348 RMEDVSCYWERLLTDFSKLLKYK 370
Cdd:smart00672 234 SMEDVYDYMFHLLQEYAKLLKYK 256
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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