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Conserved domains on  [gi|2092043637|ref|XP_043429539|]
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centrosomal protein of 104 kDa isoform X1 [Prionailurus bengalensis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK07003 super family cl35530
DNA polymerase III subunit gamma/tau;
318-435 7.55e-06

DNA polymerase III subunit gamma/tau;


The actual alignment was detected with superfamily member PRK07003:

Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 49.85  E-value: 7.55e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2092043637 318 QQPALSRPREDRAPESLRAEPFLQEKPPANPLGPPQPATADQAPPAADPHFRTHLQAVPYDERPLPATRK-QPAAALEPe 396
Cdd:PRK07003  450 PAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREdAPAAAAPP- 528

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 2092043637 397 ksdwdsseAPRGAAtgePEPLTEKALRE---ASAAVDVLGEA 435
Cdd:PRK07003  529 --------APEARP---PTPAAAAPAARaggAAAALDVLRNA 559
 
Name Accession Description Interval E-value
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
318-435 7.55e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 49.85  E-value: 7.55e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2092043637 318 QQPALSRPREDRAPESLRAEPFLQEKPPANPLGPPQPATADQAPPAADPHFRTHLQAVPYDERPLPATRK-QPAAALEPe 396
Cdd:PRK07003  450 PAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREdAPAAAAPP- 528

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 2092043637 397 ksdwdsseAPRGAAtgePEPLTEKALRE---ASAAVDVLGEA 435
Cdd:PRK07003  529 --------APEARP---PTPAAAAPAARaggAAAALDVLRNA 559
 
Name Accession Description Interval E-value
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
318-435 7.55e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 49.85  E-value: 7.55e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2092043637 318 QQPALSRPREDRAPESLRAEPFLQEKPPANPLGPPQPATADQAPPAADPHFRTHLQAVPYDERPLPATRK-QPAAALEPe 396
Cdd:PRK07003  450 PAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREdAPAAAAPP- 528

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 2092043637 397 ksdwdsseAPRGAAtgePEPLTEKALRE---ASAAVDVLGEA 435
Cdd:PRK07003  529 --------APEARP---PTPAAAAPAARaggAAAALDVLRNA 559
PHA03247 PHA03247
large tegument protein UL36; Provisional
 299-396 9.37e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 49.94  E-value: 9.37e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2092043637  299 RRPPdlPLQPLAHSGSPRHQqPA--LSRPREDRAPESLrAEPFLQEKPPANPLGPPQPATADQAPPAADPHFRTHLQAVP 376
Cdd:PHA03247  2864 RRPP--SRSPAAKPAAPARP-PVrrLARPAVSRSTESF-ALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRP 2939

                           90       100
                   ....*....|....*....|
gi 2092043637  377 ydeRPLPATRKQPAAALEPE 396
Cdd:PHA03247  2940 ---QPPLAPTTDPAGAGEPS 2956
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 286-437 1.29e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 45.57  E-value: 1.29e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2092043637 286 QLRRHS---------LVDAELVRRPPDLPLQPLAHSGSPRHQQPA-LSRPREDRA----PESLRAEPFLQEKPPANPLGP 351
Cdd:PRK14950  340 QLRTTSygqlplelaVIEALLVPVPAPQPAKPTAAAPSPVRPTPApSTRPKAAAAanipPKEPVRETATPPPVPPRPVAP 419

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2092043637 352 PQPATADQAPPAADphfrthlQAVPYDERPLpatrkqpAAALEPEKSDWDSSEAPrGAATGEPEPLTEKALREA---SAA 428
Cdd:PRK14950  420 PVPHTPESAPKLTR-------AAIPVDEKPK-------YTPPAPPKEEEKALIAD-GDVLEQLEAIWKQILRDVpprSPA 484


                  ....*....
gi 2092043637 429 VDVLGEALV 437
Cdd:PRK14950  485 VQALLSSGV 493
PHA03378 PHA03378
EBNA-3B; Provisional
 300-416 1.30e-04

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 45.83  E-value: 1.30e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2092043637 300 RPPDLPLQPL---AHSGSPRHQQPALSRPrEDRAPESLRaepflqekPPANPLG---PPQPATADQAPPAADPHFRTHLQ 373
Cdd:PHA03378  668 QIGHIPYQPSptgANTMLPIQWAPGTMQP-PPRAPTPMR--------PPAAPPGraqRPAAATGRARPPAAAPGRARPPA 738

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 2092043637 374 AVPYDERP---LPATRKQPAAALEPEKsdwdSSEAPRGAATGEPEP 416
Cdd:PHA03378  739 AAPGRARPpaaAPGRARPPAAAPGRAR----PPAAAPGAPTPQPPP 780
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 305-436 1.45e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 45.75  E-value: 1.45e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2092043637 305 PLQPLAHSGSPRHQQPALSRPRED-RAPESLRAEPFLQEKPPANPLGPPQPATADQAPPAADPHFRTHLQAVPYDERPLP 383
Cdd:PRK07764  683 PAPAPAAPAAPAGAAPAQPAPAPAaTPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPP 762

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2092043637 384 ATRKQPAAALEPEKSDWDSSEAPRGAATGEPEPlteKALREASA-AVDVLGEAL 436
Cdd:PRK07764  763 APAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDD---EDRRDAEEvAMELLEEEL 813
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 301-498 2.09e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 41.77  E-value: 2.09e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2092043637 301 PPDLPLQPLAHSGSPrhqQPALSRPREDRAPESLRAEPFLQEKPPANPLGPPQPATADQAPPAADPHFRthLQAVPyder 380
Cdd:PRK07994  393 PPQAPAVPPPPASAP---QQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAASRARPVNSALER--LASVR---- 463

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2092043637 381 plPATRKQPAAALEPEKSDWDSSEAprgAATGEPEPLTEKALREASAAVDV--LGEALVAGAYSK-TWSyREDALLALCK 457
Cdd:PRK07994  464 --PAPSALEKAPAKKEAYRWKATNP---VEVKKEPVATPKALKKALEHEKTpeLAAKLAAEAIERdPWA-ALVSQLGLPG 537

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 2092043637 458 RLMQMPAGAPKEELK-NVLRasiFLVRRAVRDLVTPVFQASL 498
Cdd:PRK07994  538 LVEQLALNAWKEEHDnGEVC---LHLRPSQRHLNSPRAQQRL 576
PHA03247 PHA03247
large tegument protein UL36; Provisional
 300-432 2.82e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.85  E-value: 2.82e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2092043637  300 RPPDLP--LQPLAHSGSPrhqqPALSRPREDRAPESLRAEPFLQEKPPANPLGPPQPATADQAPPAADPhfrthlqAVPY 377
Cdd:PHA03247  2684 RRRAARptVGSLTSLADP----PPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGP-------ATPG 2752

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 2092043637  378 DERPlPATRKQPAAALEPeksdwdssEAPRGAATGEPEPLTEKALREASAAVDVL 432
Cdd:PHA03247  2753 GPAR-PARPPTTAGPPAP--------APPAAPAAGPPRRLTRPAVASLSESRESL 2798
PHA03247 PHA03247
large tegument protein UL36; Provisional
 297-405 3.67e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.46  E-value: 3.67e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2092043637  297 LVRRPPDLPLQPLAH--SGSPRHQQPALSRPREDRAPESLRAEPFLQEKPPANPLGPPQPATADQAPPAADP-------- 366
Cdd:PHA03247  2886 LARPAVSRSTESFALppDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGavpqpwlg 2965

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*..
gi 2092043637  367 HFRTHLQAVPYDERPLPA-TRKQPAAALEPEK-------SDWDSSEA 405
Cdd:PHA03247  2966 ALVPGRVAVPRFRVPQPApSREAPASSTPPLTghslsrvSSWASSLA 3012
dnaA PRK14086
chromosomal replication initiator protein DnaA;
286-442 7.82e-03

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 39.81  E-value: 7.82e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2092043637 286 QLRRHSLVDAELVRRPPDLPLQPLAHS----GSPRHQQPALSRPREDRAPESLRAEPFLQEKPPANPL-----------G 350
Cdd:PRK14086   81 PIRIAITVDPSAGEPAPPPPHARRTSEpelpRPGRRPYEGYGGPRADDRPPGLPRQDQLPTARPAYPAyqqrpepgawpR 160

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2092043637 351 PPQPATADQ---APPAADPHfrthlqAVPYDERPLPATRKQPAAALEPEKS-DWDSSEAPRGAATG---------EPEPL 417
Cdd:PRK14086  161 AADDYGWQQqrlGFPPRAPY------ASPASYAPEQERDREPYDAGRPEYDqRRRDYDHPRPDWDRprrdrtdrpEPPPG 234

                         170       180
                  ....*....|....*....|....*
gi 2092043637 418 TEKALREASAAVDVLGEALVAGAYS 442
Cdd:PRK14086  235 AGHVHRGGPGPPERDDAPVVPIRPS 259
PHA03247 PHA03247
large tegument protein UL36; Provisional
 301-416 7.97e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 40.31  E-value: 7.97e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2092043637  301 PPDL-PLQPLAHSGSPR-------HQQPALSRPREDRAPESLRAEPFLQEKPPANPLGPPQPATADQAPPAADPHFRTHL 372
Cdd:PHA03247  2618 PPDThAPDPPPPSPSPAanepdphPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTS 2697

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 2092043637  373 QAVPYDERPLPATRKQPAAALEPEKSDWDSSEAPRGAATGEPEP 416
Cdd:PHA03247  2698 LADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAP 2741
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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