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Conserved domains on  [gi|2077622636|ref|XP_042751071|]
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feather keratin 4-like isoform X1 [Lagopus leucura]

Protein Classification

keratin( domain architecture ID 10493429)

keratin is a fibrous structural protein making up hair, nails, horns, claws, hooves, and the outer layer of animal skin

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Keratin pfam02422
Keratin; This family represents avian keratin proteins, found in feathers, scale and claw.
 14-87 7.42e-33

Keratin; This family represents avian keratin proteins, found in feathers, scale and claw.


:

Pssm-ID: 460553  Cd Length: 81  Bit Score: 109.45  E-value: 7.42e-33
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2077622636  14 CFDLCRP----CGPTPLANSCNEPCVRQCQDSRVVIQPSPVVVTLPGPILSSFPQNTAVGSSTSAAVGSILSEEGVPI 87
Cdd:pfam02422   1 CYDLCPPccgvAGPQPLANSCNEPCVRQCPDSTVVIQPPPVVVTFPGPILSSFPQNSVVGSSGSAAVGGSLGYGGVYG 78
 
Name Accession Description Interval E-value
Keratin pfam02422
Keratin; This family represents avian keratin proteins, found in feathers, scale and claw.
 14-87 7.42e-33

Keratin; This family represents avian keratin proteins, found in feathers, scale and claw.


Pssm-ID: 460553  Cd Length: 81  Bit Score: 109.45  E-value: 7.42e-33
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2077622636  14 CFDLCRP----CGPTPLANSCNEPCVRQCQDSRVVIQPSPVVVTLPGPILSSFPQNTAVGSSTSAAVGSILSEEGVPI 87
Cdd:pfam02422   1 CYDLCPPccgvAGPQPLANSCNEPCVRQCPDSTVVIQPPPVVVTFPGPILSSFPQNSVVGSSGSAAVGGSLGYGGVYG 78
 
Name Accession Description Interval E-value
Keratin pfam02422
Keratin; This family represents avian keratin proteins, found in feathers, scale and claw.
 14-87 7.42e-33

Keratin; This family represents avian keratin proteins, found in feathers, scale and claw.


Pssm-ID: 460553  Cd Length: 81  Bit Score: 109.45  E-value: 7.42e-33
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2077622636  14 CFDLCRP----CGPTPLANSCNEPCVRQCQDSRVVIQPSPVVVTLPGPILSSFPQNTAVGSSTSAAVGSILSEEGVPI 87
Cdd:pfam02422   1 CYDLCPPccgvAGPQPLANSCNEPCVRQCPDSTVVIQPPPVVVTFPGPILSSFPQNSVVGSSGSAAVGGSLGYGGVYG 78
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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