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Conserved domains on  [gi|1927025702|ref|XP_036905412|]
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dnaJ homolog subfamily B member 6 [Sturnira hondurensis]

Protein Classification

molecular chaperone DnaJ( domain architecture ID 1000952)

molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  2.10.230.10
Gene Ontology:  GO:0051082|GO:0005524|GO:0009408|GO:0006457
PubMed:  8016869|15063739|29290615
SCOP:  4003813|4002149

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK10767 super family cl35946
chaperone protein DnaJ; Provisional
 3-107 2.10e-39

chaperone protein DnaJ; Provisional


The actual alignment was detected with superfamily member PRK10767:

Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 142.59  E-value: 2.10e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKeEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGSHF 82
Cdd:PRK10767    5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGGF 83

                          90       100
                  ....*....|....*....|....*
gi 1927025702  83 DSrFGEFGFTFrnpEDVFRDFFGGR 107
Cdd:PRK10767   84 GG-GGGFGDIF---GDIFGDIFGGG 104
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 3-107 2.10e-39

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 142.59  E-value: 2.10e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKeEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGSHF 82
Cdd:PRK10767    5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGGF 83

                          90       100
                  ....*....|....*....|....*
gi 1927025702  83 DSrFGEFGFTFrnpEDVFRDFFGGR 107
Cdd:PRK10767   84 GG-GGGFGDIF---GDIFGDIFGGG 104
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-106 7.16e-37

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 135.42  E-value: 7.16e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDnkEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGSHF 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGG 78

                          90       100
                  ....*....|....*....|....
gi 1927025702  83 DSRFGEFGFtFRNPEDVFRDFFGG 106
Cdd:TIGR02349  79 GFNGFDIGF-FGDFGDIFGDFFGG 101
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 7.99e-37

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 126.43  E-value: 7.99e-37
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKeEAERKFKQVAEAYEVLSDAKKRDIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-68 1.64e-33

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 120.58  E-value: 1.64e-33
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKeEAERKFKQVAEAYEVLSDAKKRDIYDKY 68
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRF 65
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 2.27e-32

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 114.64  E-value: 2.27e-32
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702    2 VDYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKEEAERKFKQVAEAYEVLSDAKK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 3.03e-29

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 106.48  E-value: 3.03e-29
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNkEEAERKFKQVAEAYEVLSD 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-106 5.68e-29

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 115.69  E-value: 5.68e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNpdNKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGkeglngggggshF 82
Cdd:NF037946    6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKYG------------H 71

                          90       100
                  ....*....|....*....|....
gi 1927025702  83 DSRFGEFGFTFrNPEDVFRDFFGG 106
Cdd:NF037946   72 DGVDGEGGFGF-DAFDVFSSFFET 94
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 3-107 2.10e-39

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 142.59  E-value: 2.10e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKeEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGSHF 82
Cdd:PRK10767    5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGGF 83

                          90       100
                  ....*....|....*....|....*
gi 1927025702  83 DSrFGEFGFTFrnpEDVFRDFFGGR 107
Cdd:PRK10767   84 GG-GGGFGDIF---GDIFGDIFGGG 104
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-106 7.16e-37

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 135.42  E-value: 7.16e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDnkEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGSHF 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGG 78

                          90       100
                  ....*....|....*....|....
gi 1927025702  83 DSRFGEFGFtFRNPEDVFRDFFGG 106
Cdd:TIGR02349  79 GFNGFDIGF-FGDFGDIFGDFFGG 101
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 7.99e-37

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 126.43  E-value: 7.99e-37
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKeEAERKFKQVAEAYEVLSDAKKRDIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-68 1.64e-33

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 120.58  E-value: 1.64e-33
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKeEAERKFKQVAEAYEVLSDAKKRDIYDKY 68
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRF 65
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 3-105 3.88e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 125.65  E-value: 3.88e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKeEAERKFKQVAEAYEVLSDAKKRDIYDKYGKE--GLNGGGGGS 80
Cdd:PRK14294    5 DYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDK-EAEELFKEAAEAYEVLSDPKKRGIYDQYGHEglSGTGFSGFS 83

                          90       100
                  ....*....|....*....|....*
gi 1927025702  81 HFDSRFGEFGftfrnpeDVFRDFFG 105
Cdd:PRK14294   84 GFDDIFSSFG-------DIFEDFFG 101
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 2.27e-32

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 114.64  E-value: 2.27e-32
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702    2 VDYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKEEAERKFKQVAEAYEVLSDAKK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 3-107 1.18e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 119.13  E-value: 1.18e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKEEAERKFKQVAEAYEVLSDAKKRDIYDKY-----GKEGLNGGG 77
Cdd:PRK14282    5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFgyvgeQPPYQETES 84

                          90       100       110
                  ....*....|....*....|....*....|
gi 1927025702  78 GGSHFDSRFGEFGFTFRNpeDVFRDFFGGR 107
Cdd:PRK14282   85 GGGFFEDIFKDFENIFNR--DIFDIFFGER 112
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 3-106 1.21e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 118.88  E-value: 1.21e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGSHF 82
Cdd:PRK14290    4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNFNW 83

                          90       100
                  ....*....|....*....|....*
gi 1927025702  83 DSrfgefgFT-FRNPEDVFRDFFGG 106
Cdd:PRK14290   84 DN------FThFSDINDIFNQIFGG 102
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 3-105 2.72e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 117.92  E-value: 2.72e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNkEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGSHF 82
Cdd:PRK14301    5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN-PEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGGF 83

                          90       100
                  ....*....|....*....|....*.
gi 1927025702  83 DSR---FGEFGftfrnpeDVFRDFFG 105
Cdd:PRK14301   84 SSAediFSHFS-------DIFGDLFG 102
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 3.03e-29

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 106.48  E-value: 3.03e-29
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNkEEAERKFKQVAEAYEVLSD 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-106 5.68e-29

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 115.69  E-value: 5.68e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNpdNKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGkeglngggggshF 82
Cdd:NF037946    6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKYG------------H 71

                          90       100
                  ....*....|....*....|....
gi 1927025702  83 DSRFGEFGFTFrNPEDVFRDFFGG 106
Cdd:NF037946   72 DGVDGEGGFGF-DAFDVFSSFFET 94
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 3-106 6.62e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 114.48  E-value: 6.62e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDnkEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGSHF 82
Cdd:PRK14291    4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG 81

                          90       100
                  ....*....|....*....|....
gi 1927025702  83 DSRFGEFGFTfrNPEDVFRDFFGG 106
Cdd:PRK14291   82 QEGFSDFGGG--NIEDILEDVFDI 103
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 3-107 9.96e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 114.13  E-value: 9.96e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKeEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGS-- 80
Cdd:PRK14277    6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDK-EAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQgg 84

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1927025702  81 ---------HFDSRFGEFGFTFrnpEDVFRDFFGGR 107
Cdd:PRK14277   85 fgqggfgggGFDFDFGGFGDIF---EDIFGDFFGTG 117
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 3-106 1.05e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 111.44  E-value: 1.05e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKeEAERKFKQVAEAYEVLSDAKKRDIYDKYgKEGLNGGGGGSHF 82
Cdd:PRK14281    4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNK-EAEEHFKEVNEAYEVLSNDDKRRRYDQF-GHAGVGSSAASGG 81

                          90       100
                  ....*....|....*....|....
gi 1927025702  83 DSRFGEFGFTFRNPEDVFRDFFGG 106
Cdd:PRK14281   82 GPGYGGGGGDFNDIFSAFNDMFGG 105
PRK14280 PRK14280
molecular chaperone DnaJ;
3-109 2.58e-27

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 109.81  E-value: 2.58e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKnpdNKEE-AERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGSH 81
Cdd:PRK14280    5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDI---NKEEgADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGG 81

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1927025702  82 F-DSRFGE-FGFtfrnpEDVFRDFFGG----RDP 109
Cdd:PRK14280   82 FgGGDFGGgFGF-----EDIFSSFFGGggrrRDP 110
PRK14297 PRK14297
molecular chaperone DnaJ;
3-106 3.06e-27

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 109.87  E-value: 3.06e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKeEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGgshF 82
Cdd:PRK14297    5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNK-EAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGG---F 80

                          90       100
                  ....*....|....*....|....*.
gi 1927025702  83 DSR-FGEFGFT-FRNPEDVFRDFFGG 106
Cdd:PRK14297   81 GSGgFGGFDFSdMGGFGDIFDSFFGG 106
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 3-62 5.33e-27

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 100.84  E-value: 5.33e-27
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKeEAERKFKQVAEAYEVLSDAKKR 62
Cdd:COG5407     1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDP-KAEERFKEINEAYELLSDAEKR 59
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 3-109 6.74e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 109.02  E-value: 6.74e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNpdnKEE-AERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLN-----GG 76
Cdd:PRK14276    5 EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDIN---KEPgAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANggfggGA 81

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1927025702  77 GGGSHFDSRFGEFGFtfrnpEDVFRDFFGG----RDP 109
Cdd:PRK14276   82 GGFGGFDGSGGFGGF-----EDIFSSFFGGggarRNP 113
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 3-106 1.04e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 108.40  E-value: 1.04e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDnkEEAERKFKQVAEAYEVLSDAKKRDIYDKYgkeglngggGGSHF 82
Cdd:PRK14298    6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRF---------GHAGI 74

                          90       100
                  ....*....|....*....|....*...
gi 1927025702  83 DSRFGE---F-GFTFRNPEDVFRDFFGG 106
Cdd:PRK14298   75 DNQYSAediFrGADFGGFGDIFEMFFGG 102
PRK14289 PRK14289
molecular chaperone DnaJ;
3-106 1.99e-26

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 107.61  E-value: 1.99e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKeEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGSHF 82
Cdd:PRK14289    6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDK-EAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGGGF 84

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1927025702  83 DSR-------FGEFGftfrnpeDVFRDFFGG 106
Cdd:PRK14289   85 SGEgmsmediFSMFG-------DIFGGHGGG 108
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 3-106 3.22e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 107.24  E-value: 3.22e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKeEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGS-- 80
Cdd:PRK14284    2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA-EAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFgg 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1927025702  81 --------HFDSRFGEFGFTFRNPEDVFRDFFGG 106
Cdd:PRK14284   81 agmgnmedALRTFMGAFGGEFGGGGSFFEGLFGG 114
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 3-107 6.06e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 106.23  E-value: 6.06e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKEeAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGSHF 82
Cdd:PRK14285    4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKE-AESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEGF 82

                          90       100
                  ....*....|....*....|....*
gi 1927025702  83 DSRFGEFGFTFRNPEDVFRDFFGGR 107
Cdd:PRK14285   83 SGGFSGFSDIFEDFGDIFDSFFTGN 107
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 3-106 6.10e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 106.29  E-value: 6.10e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDnkEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGSHF 82
Cdd:PRK14278    4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGGGGF 81

                          90       100
                  ....*....|....*....|....
gi 1927025702  83 DSRFGEFGftfrnpeDVFRDFFGG 106
Cdd:PRK14278   82 GGGFGGLG-------DVFEAFFGG 98
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-66 3.30e-25

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 97.10  E-value: 3.30e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1927025702   1 MVDYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKEEAERKFKQVAEAYEVLSDAKKRDIYD 66
Cdd:COG2214     4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYD 69
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 4-106 6.77e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 103.15  E-value: 6.77e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   4 YYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKeEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNG------GG 77
Cdd:PRK14286    6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNK-ESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAgaggfgQG 84

                          90       100
                  ....*....|....*....|....*....
gi 1927025702  78 GGSHFDSRFGEFGftfrnpeDVFRDFFGG 106
Cdd:PRK14286   85 AYTDFSDIFGDFG-------DIFGDFFGG 106
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-106 1.24e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 102.66  E-value: 1.24e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   1 MVDYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDnkEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGs 80
Cdd:PRK14292    1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGG- 77

                          90       100
                  ....*....|....*....|....*.
gi 1927025702  81 hfdSRFGEFGFtfrNPEDVFRDFFGG 106
Cdd:PRK14292   78 ---DPFGGMGF---DPMDIFEQLFGG 97
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 3-106 1.38e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 102.60  E-value: 1.38e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDnkEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGS-- 80
Cdd:PRK14283    6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQEDif 83

                          90       100
                  ....*....|....*....|....*....
gi 1927025702  81 ---HFDSRFGEFGFTFRNPEDVFRdfFGG 106
Cdd:PRK14283   84 nniNFEDIFQGFGFGIGNIFDMFG--FGG 110
PRK14279 PRK14279
molecular chaperone DnaJ;
3-106 3.34e-23

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 98.65  E-value: 3.34e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKEEAERkFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGSHF 82
Cdd:PRK14279   10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEER-FKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGRRF 88

                          90       100
                  ....*....|....*....|....*.
gi 1927025702  83 DSR--FGEFGFTFRNPEDVFRDFFGG 106
Cdd:PRK14279   89 DGGggFGGFGTGGDGAEFNLNDLFDA 114
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 3-104 1.62e-21

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 95.27  E-value: 1.62e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNpdNKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGkeglngggggshF 82
Cdd:TIGR03835   3 DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRN--KAPDAASIFAEINEANDVLSNPKKRANYDKYG------------H 68

                          90       100
                  ....*....|....*....|..
gi 1927025702  83 DSRFGEFGFTFRnpEDVFRDFF 104
Cdd:TIGR03835  69 DGVDREDDFDFQ--ADVFNSFF 88
PRK14293 PRK14293
molecular chaperone DnaJ;
1-106 1.76e-21

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 93.52  E-value: 1.76e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   1 MVDYYEVLGVQRHASAEDIKKAYRKLALKWHPDKnpdNKEE-AERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGG 79
Cdd:PRK14293    2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDV---NKEPgAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGF 78

                          90       100
                  ....*....|....*....|....*..
gi 1927025702  80 SHFDSrFGEFGftfrnpeDVFRDFFGG 106
Cdd:PRK14293   79 PDMGD-MGGFA-------DIFETFFSG 97
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 3-107 1.49e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 90.00  E-value: 1.49e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDnkEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGG-SH 81
Cdd:PRK14299    5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGpPP 82

                          90       100
                  ....*....|....*....|....*..
gi 1927025702  82 FDSRFGEF-GFTFRNPEDVFRDFFGGR 107
Cdd:PRK14299   83 GPPGGGDFsGFNVGDFSDFFQQLFGGR 109
PRK14295 PRK14295
molecular chaperone DnaJ;
3-66 1.07e-19

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 88.75  E-value: 1.07e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKeEAERKFKQVAEAYEVLSDAKKRDIYD 66
Cdd:PRK14295   10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDA-KAEERFKEISEAYDVLSDEKKRKEYD 72
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 3-105 1.50e-19

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 88.08  E-value: 1.50e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNpdNKEEAERKFKQVAEAYEVLSDAKKRDIYDKYgkeGLNGGGGGSHF 82
Cdd:PRK14296    5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLN--KSPDAHDKMVEINEAADVLLDKDKRKQYDQF---GHAAFDGSSGF 79

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1927025702  83 DSRFGEFGFTFRNP--------EDVFRDFFG 105
Cdd:PRK14296   80 SSNFGDFEDLFSNMgssgfssfTNIFSDFFG 110
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 4-106 5.04e-19

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 87.18  E-value: 5.04e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   4 YYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDnkeeaERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLngggggshfd 83
Cdd:PTZ00037   30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGL---------- 94

                          90       100
                  ....*....|....*....|...
gi 1927025702  84 srfgEFGFTFRNPEDVFRDFFGG 106
Cdd:PTZ00037   95 ----EGGEQPADASDLFDLIFGG 113
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 3-106 9.62e-19

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 85.83  E-value: 9.62e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNpdNKEEAERKFKQVAEAYEVLSDAKKRDIYDKYgkeglngggggSHF 82
Cdd:PRK14287    5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVN--KAPDAEDKFKEVKEAYDTLSDPQKKAHYDQF-----------GHT 71

                          90       100
                  ....*....|....*....|....*..
gi 1927025702  83 DSR--FGEFGF-TFRNPEDVFRDFFGG 106
Cdd:PRK14287   72 DPNqgFGGGGAgDFGGFSDIFDMFFGG 98
PRK14288 PRK14288
molecular chaperone DnaJ;
2-107 3.44e-18

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 84.36  E-value: 3.44e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   2 VDYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNKeEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEG-LNGGGGGS 80
Cdd:PRK14288    3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK-EAEEKFKLINEAYGVLSDEKKRALYDRYGKKGlNQAGASQS 81

                          90       100
                  ....*....|....*....|....*..
gi 1927025702  81 HFDSRFGEFGFTFrnpEDVFRdfFGGR 107
Cdd:PRK14288   82 DFSDFFEDLGSFF---EDAFG--FGAR 103
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 3-104 1.48e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 79.67  E-value: 1.48e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDKNpdNKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGgggshf 82
Cdd:PRK14300    4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTT--DAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQ------ 75

                          90       100
                  ....*....|....*....|....
gi 1927025702  83 DSRFGEFGFTFRNPE--DVFRDFF 104
Cdd:PRK14300   76 QSRGGGGNHGGFHPDinDIFGDFF 99
PRK10266 PRK10266
curved DNA-binding protein;
3-105 2.68e-16

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 77.94  E-value: 2.68e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPD--KNPDnkeeAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLngggggs 80
Cdd:PRK10266    5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEPD----AEARFKEVAEAWEVLSDEQRRAEYDQLWQHRN------- 73

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1927025702  81 hfDSRFGEF-------GFTFRNPEDVFRDFFG 105
Cdd:PRK10266   74 --DPQFNRQfqhgdgqSFNAEDFDDIFSSIFG 103
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-64 6.50e-15

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 68.67  E-value: 6.50e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1927025702   1 MVDYYEVLGVQRHASAEDIKKAYRKLALKWHPDK-----NPDNKEEAERKFKQVAEAYEVLSDAKKRDI 64
Cdd:COG1076     3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLALQKAAAINEAYETLKDPRGIDL 71
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 4-68 1.97e-10

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 62.11  E-value: 1.97e-10
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1927025702    4 YYEVLGVQRHASAEDIKKAYRKLALKWHPDKNPDNkeEAERKFKQVAEAYEVLSDAKKRDIYDKY 68
Cdd:PTZ00341   575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKF 637
djlA PRK09430
co-chaperone DjlA;
3-61 2.08e-07

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 51.35  E-value: 2.08e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1927025702   3 DYYEVLGVQRHASAEDIKKAYRKLALKWHPDK------NPDNKEEAERKFKQVAEAYEVLSDAKK 61
Cdd:PRK09430  201 DAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvakglPPEMMEMAKEKAQEIQAAYELIKKQKG 265
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 2-66 8.23e-07

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 50.03  E-value: 8.23e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1927025702   2 VDYYEVLGVQRH---ASAEDIKKAYRKLALKWHPDKNPDNKEEAERK-FKQVAEAYEVLSDAKKRDIYD 66
Cdd:COG5269    43 VDLYALLGLSKYrtkAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEfFKLIQKAREVLGDRKLRLQYD 111
hscB PRK01356
co-chaperone HscB; Provisional
 1-65 1.00e-04

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 42.17  E-value: 1.00e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1927025702   1 MVDYYEVLGVQRHASA--EDIKKAYRKLALKWHPDKnPDNKEEAERKFKQVAE---AYEVLSDAKKRDIY 65
Cdd:PRK01356    1 MQNYFQLLGLPQEYNIdlKILEKQYFAMQVKYHPDK-AKTLQEKEQNLIIASElnnAYSTLKDALKRAEY 69
PHA03102 PHA03102
Small T antigen; Reviewed
 6-62 1.52e-04

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 41.58  E-value: 1.52e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1927025702   6 EVLGVQRHA--SAEDIKKAYRKLALKWHPDKNPDnkeeaERKFKQVAEAYEVLSDAKKR 62
Cdd:PHA03102    9 DLLGLPRSAwgNLPLMRKAYLRKCLEFHPDKGGD-----EEKMKELNTLYKKFRESVKS 62
PHA02624 PHA02624
large T antigen; Provisional
 6-62 4.45e-04

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 41.89  E-value: 4.45e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1927025702   6 EVLGVQRHA--SAEDIKKAYRKLALKWHPDKNPDnkeeaERKFKQVAEAYEVLSDAKKR 62
Cdd:PHA02624   15 DLLGLPMAAwgNLPLMRKAYLRKCKEYHPDKGGD-----EEKMKRLNSLYKKLQEGVKS 68
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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