|
Name |
Accession |
Description |
Interval |
E-value |
| Rabaptin |
pfam03528 |
Rabaptin; |
9-495 |
0e+00 |
|
Rabaptin;
Pssm-ID: 367545 [Multi-domain] Cd Length: 486 Bit Score: 766.58 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 9 QPDVSLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENI 88
Cdd:pfam03528 1 QPDEDLQQRVAELEKENAEFYRLKQQLEAEFNQKRAKFKELYLAKEEDLKRQNAVLQEAQVELDALQNQLALARAEMENI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 89 KAIATVSENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHHRLEQERTQWAQYRESTEREIADLRRRLSEGQEEE 168
Cdd:pfam03528 81 KAVATVSENTKQEAIDEVKSQWQEEVASLQAIMKETVREYEVQFHRRLEQERAQWNQYRESAEREIADLRRRLSEGQEEE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 169 NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVL 248
Cdd:pfam03528 161 NLEDEMKKAQEDAEKLRSVVMPMEKEIAALKAKLTEAEDKIKELEASKMKELNHYLEAEKSCRTDLEMYVAVLNTQKSVL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 249 QEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEEMKKKDQEEDEQQR 328
Cdd:pfam03528 241 QEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMESVLTSEQLRQVEEIKKKDQEEHKRAR 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 329 LNKRKDHKKPDAEEEMKVPVVCALTHEESLAPLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSKSDnDMFKDGLRRAQST 408
Cdd:pfam03528 321 THKEKETLKSDREHTVSIHAVFSPAGVETSAPLSNVEEQINSAHGSVHSLDTDVVLGAGDSFNKQE-DPFKEGLRRAQST 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 409 DSLGTSGSLQSKALGYNYKAKSAGNLDESDFGPLVGADSVSENFDTASLGSLQMPSGFMLTKDQERAIKAMTPEQEETAS 488
Cdd:pfam03528 400 DSLGSSSSLQHKFLGHNQKAKSAGNLDESDFGPLVGADSVSENFDTSSLGSLKMPSGFMLTKDQEKAIKAMTPEQEETAS 479
|
....*..
gi 1926244577 489 LLSSVTQ 495
Cdd:pfam03528 480 LLSSVTQ 486
|
|
| Rab5-bind |
pfam09311 |
Rabaptin-like protein; Members of this family are predominantly found in Rabaptin and allow ... |
533-790 |
2.31e-93 |
|
Rabaptin-like protein; Members of this family are predominantly found in Rabaptin and allow for binding to the GTPase Rab5. This interaction is necessary and sufficient for Rab5-dependent recruitment of Rabaptin5 to early endosomal membranes.
Pssm-ID: 462752 [Multi-domain] Cd Length: 307 Bit Score: 295.34 E-value: 2.31e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 533 CDMCSNYEKQLQGIQIQEAETRD---------------------------------------QISALVLRAQTSEILLEE 573
Cdd:pfam09311 1 CDMCSNYEKQLQAIQEQEAETRDqvkklqemlrqandqlektmkdkkeledkmnqlseetsnQVSTLAKRNQKSETLLDE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 574 LQQTFSQAKRDVQEQMAVLMQSRQQVSEELVRLQKDNDSLQGKHSLHVSLQQAEDFILPDTTEALRELVLKFRENIINVR 653
Cdd:pfam09311 81 LQQAFSQAKRNFQDQLAVLMDSREQVSDELVRLQKDNESLQGKHSLHVSLQQAEKFDMPDTVQELQELVLKYREELIEVR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 654 TAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLKEKSQQLESL 733
Cdd:pfam09311 161 TAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQAEIENCKEEIASISSLKVELERIKAEKEQLENGLTEKIRQLEDL 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1926244577 734 QEMKVTLEEQLKRETAAKVTIEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQ 790
Cdd:pfam09311 241 QTTKGSLETQLKKETNEKAAVEQLVFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQ 297
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
13-793 |
8.83e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 75.48 E-value: 8.83e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 13 SLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELylakeEDLKRQNAVLQAAQDdlghlrtqlwEAQAEMENIKAia 92
Cdd:TIGR02168 233 RLEELREELEELQEELKEAEEELEELTAELQELEEKL-----EELRLEVSELEEEIE----------ELQKELYALAN-- 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 93 tvsentKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHHRLEQER--TQWAQYRESTEREIADLRRRLSEGQEE-EN 169
Cdd:TIGR02168 296 ------EISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEelAELEEKLEELKEELESLEAELEELEAElEE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 170 LENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCrtdLEMYVAVLNTQKSVLQ 249
Cdd:TIGR02168 370 LESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKL---EEAELKELQAELEELE 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 250 EDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLmRDMQRMEIVLTSEQLRQVEEMKKKDQEEDEQQRL 329
Cdd:TIGR02168 447 EELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARL-DSLERLQENLEGFSEGVKALLKNQSGLSGILGVL 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 330 nkrKDHKKPDAEEEMKVPVVC-----ALTHEESLAPLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSksdndmfkDGLRR 404
Cdd:TIGR02168 526 ---SELISVDEGYEAAIEAALggrlqAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGN--------DREIL 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 405 AQSTDSLGTSGSLQSKALGYnykaksagnldESDFGPLVGADSVSENFDTASLGSLQMPSGFML-TKDQERAIK--AMTP 481
Cdd:TIGR02168 595 KNIEGFLGVAKDLVKFDPKL-----------RKALSYLLGGVLVVDDLDNALELAKKLRPGYRIvTLDGDLVRPggVITG 663
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 482 EQEETASLLSSVTQGMESAyvspsgyrlvsETEWNLLQKEVHNAGNKLGRRCDMCSNYEKQLQGIQIQEAETRDQISAL- 560
Cdd:TIGR02168 664 GSAKTNSSILERRREIEEL-----------EEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALr 732
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 561 --VLRAQTSEILLEELQQTFSQAKRDVQEQMAVLMQSRQQVSEELVRLQKDNDSLQgkhslhvslQQAEDFIlpDTTEAL 638
Cdd:TIGR02168 733 kdLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELE---------AQIEQLK--EELKAL 801
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 639 RELVLKFRENIINVRTAADHMEEKLkaeilflkEQIQAEQCLKENLEETLQLEIENCKEEIAsisSLKAELERIKVEKGQ 718
Cdd:TIGR02168 802 REALDELRAELTLLNEEAANLRERL--------ESLERRIAATERRLEDLEEQIEELSEDIE---SLAAEIEELEELIEE 870
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1926244577 719 LESTLKEKSQQLESLQEMKVTLEEQLKRETAAKVTIEQLMFEEKNKAQRLQTEL-DVSEQVQRDFVKLSQTLQALS 793
Cdd:TIGR02168 871 LESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLaQLELRLEGLEVRIDNLQERLS 946
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
510-792 |
1.73e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.08 E-value: 1.73e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 510 VSETEWNLLQKEVHNAGNKLGRRCDMCSNYEKQLQGIQIQEAETRDQISAL---VLRAQTSEILLEELQQTFSQAKRDVQ 586
Cdd:TIGR02168 229 LLVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELeeeIEELQKELYALANEISRLEQQKQILR 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 587 EQMAVLMQSRQQVSEELVRLQKDNDSLQGKhslhVSLQQAEDFILPDTTEALRELVLKFRENIINVRTAADHMEEKL--- 663
Cdd:TIGR02168 309 ERLANLERQLEELEAQLEELESKLDELAEE----LAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLetl 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 664 KAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKgqLESTLKEKSQQLESLQEMKVTLEEQ 743
Cdd:TIGR02168 385 RSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKE--LQAELEELEEELEELQEELERLEEA 462
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1926244577 744 LKRETAAKVTIEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQAL 792
Cdd:TIGR02168 463 LEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKAL 511
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
14-335 |
3.51e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 63.92 E-value: 3.51e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 14 LQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYL---AKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKA 90
Cdd:TIGR02168 689 LEEKIAELEKALAELRKELEELEEELEQLRKELEELSRqisALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEE 768
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 91 IATVSENTKQEAIDEVKRQwREEVASLQAVMKETVRDYE--HQFHHRLEQERTQWAQYRESTEREIADLRRRLsegqeeE 168
Cdd:TIGR02168 769 RLEEAEEELAEAEAEIEEL-EAQIEQLKEELKALREALDelRAELTLLNEEAANLRERLESLERRIAATERRL------E 841
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 169 NLENEMKKAQEDAEKLrsvvmpmEKEIAALKDKLTEAEDKIKELEASKvKELNHYLEAEKSCRTDLEMYVAVLNTQKSVL 248
Cdd:TIGR02168 842 DLEEQIEELSEDIESL-------AAEIEELEELIEELESELEALLNER-ASLEEALALLRSELEELSEELRELESKRSEL 913
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 249 QEDAEKLRKELHEVCHLLEQERQQHNQLKhtwqkanDQFLESQRLLMRDMQRMEIVLTSEQL---RQVEEMKKKDQE--- 322
Cdd:TIGR02168 914 RRELEELREKLAQLELRLEGLEVRIDNLQ-------ERLSEEYSLTLEEAEALENKIEDDEEearRRLKRLENKIKElgp 986
|
330
....*....|....*...
gi 1926244577 323 -----EDEQQRLNKRKDH 335
Cdd:TIGR02168 987 vnlaaIEEYEELKERYDF 1004
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
13-323 |
8.23e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 59.31 E-value: 8.23e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 13 SLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQ---AAQDDLGHLRTQLWEAQAEMENIK 89
Cdd:TIGR02169 678 RLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQeeeKLKERLEELEEDLSSLEQEIENVK 757
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 90 AiatvsentKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHHRLEQERTQWAQYRESTEREIADLRRRL-SEGQEEE 168
Cdd:TIGR02169 758 S--------ELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLnRLTLEKE 829
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 169 NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEAsKVKELNHYLEAEKSCRTDLEmyvavlnTQKSVL 248
Cdd:TIGR02169 830 YLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEA-ALRDLESRLGDLKKERDELE-------AQLREL 901
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1926244577 249 QEDAEKLRKElhevchlLEQERQQHNQLKHTWQKANDQFLESQRLLMRDmqrMEIVLTSEQLRQVEEMKKKDQEE 323
Cdd:TIGR02169 902 ERKIEELEAQ-------IEKKRKRLSELKAKLEALEEELSEIEDPKGED---EEIPEEELSLEDVQAELQRVEEE 966
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
13-283 |
9.35e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 59.18 E-value: 9.35e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 13 SLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELylakEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAia 92
Cdd:COG1196 257 ELEAELAELEAELEELRLELEELELELEEAQAEEYEL----LAELARLEQDIARLEERRRELEERLEELEEELAELEE-- 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 93 tvsentKQEAIDEVKRQWREEVASLQAVMKETVRDyEHQFHHRLEQERTQWAQYRESTEREIADLRRRLSEGQEEENLEN 172
Cdd:COG1196 331 ------ELEELEEELEELEEELEEAEEELEEAEAE-LAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLE 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 173 EMKKAQEDAEKLRSVvmpMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDA 252
Cdd:COG1196 404 ELEEAEEALLERLER---LEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALA 480
|
250 260 270
....*....|....*....|....*....|...
gi 1926244577 253 EKLRKELHEVC--HLLEQERQQHNQLKHTWQKA 283
Cdd:COG1196 481 ELLEELAEAAArlLLLLEAEADYEGFLEGVKAA 513
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
540-795 |
1.80e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.41 E-value: 1.80e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 540 EKQLQGIQIQEAETRDQISALVLRAQTSEILLEELQQTFSQAKRDV---QEQMAVLMQSRQQVSEELVRLQKDNDSLQGK 616
Cdd:COG1196 252 EAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELarlEQDIARLEERRRELEERLEELEEELAELEEE 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 617 HSLHVSLQQAEDFILPDTTEALRELVLKFRENIINVRTAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEienck 696
Cdd:COG1196 332 LEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELE----- 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 697 eeiASISSLKAELERIKVEKGQLESTLKEKSQQLESLQEMKVTLEEQLKRETAAKVTIEQLMFEEKNKAQRLQTELDVSE 776
Cdd:COG1196 407 ---EAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELL 483
|
250
....*....|....*....
gi 1926244577 777 QVQRDFVKLSQTLQALSWE 795
Cdd:COG1196 484 EELAEAAARLLLLLEAEAD 502
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
135-343 |
1.50e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 51.86 E-value: 1.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 135 RLEQERTQWAQYRESTEREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE 213
Cdd:COG1196 243 ELEAELEELEAELEELEAELAELEAELEELRLElEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 214 ASKVKELNHYLEAEKScrtdlemyVAVLNTQKSVLQEDAEKLRKELHEvchlLEQERQQHNQLKHTWQKANDQFLESQRL 293
Cdd:COG1196 323 EELAELEEELEELEEE--------LEELEEELEEAEEELEEAEAELAE----AEEALLEAEAELAEAEEELEELAEELLE 390
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1926244577 294 LMRDMQRMEIVLTSEQLRQVEEMKKKDQEEDEQQRLNKRKDHKKPDAEEE 343
Cdd:COG1196 391 ALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEE 440
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
14-266 |
1.59e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 51.86 E-value: 1.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 14 LQQRVAELEKInaefLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIAT 93
Cdd:COG1196 293 LLAELARLEQD----IARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALL 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 94 VSENTKQEAIDEVKRQWREEVASLQAvmketvrdyEHQFHHRLEQERTQWAQYRESTEREIADLRRRLSEGQEEENLENE 173
Cdd:COG1196 369 EAEAELAEAEEELEELAEELLEALRA---------AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEE 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 174 MKKAQEDAEKLRSVVmpmEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAE 253
Cdd:COG1196 440 EEEALEEAAEEEAEL---EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLL 516
|
250
....*....|...
gi 1926244577 254 KLRKELHEVCHLL 266
Cdd:COG1196 517 AGLRGLAGAVAVL 529
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
13-795 |
2.09e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.61 E-value: 2.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 13 SLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDL-------KRQNAVLQAAQDDLGHLRTQLWEAQAEM 85
Cdd:TIGR02169 252 ELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIgeleaeiASLERSIAEKERELEDAEERLAKLEAEI 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 86 ENIKAIATVSEnTKQEAIDEVKRQWREEVASLQAVMKETVRdyehqfhhRLEQERTQWAQYREsterEIADLRRRLSEGQ 165
Cdd:TIGR02169 332 DKLLAEIEELE-REIEEERKRRDKLTEEYAELKEELEDLRA--------ELEEVDKEFAETRD----ELKDYREKLEKLK 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 166 EEEN-LENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEAsKVKELNHYLEAEKSCRTDLEmyvavlnTQ 244
Cdd:TIGR02169 399 REINeLKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKAL-EIKKQEWKLEQLAADLSKYE-------QE 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 245 KSVLQEDAEKLRKELHEvchlLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQrmEIVLTSEQLRQVEEMKKKDQEED 324
Cdd:TIGR02169 471 LYDLKEEYDRVEKELSK----LQRELAEAEAQARASEERVRGGRAVEEVLKASIQ--GVHGTVAQLGSVGERYATAIEVA 544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 325 EQQRLNKRKDHKKPDAEEEMKvpvvcaLTHEESLAPLSneeehldsthgsvhsldadlLLPsgdpfsksdndmfkdgLRR 404
Cdd:TIGR02169 545 AGNRLNNVVVEDDAVAKEAIE------LLKRRKAGRAT--------------------FLP----------------LNK 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 405 AQSTDSLGTSGSLQSkALGYNYKAKSAGNLDESDFGPLVGADSVSENFDTAS--LGSLQM---------PSGFMLT-KDQ 472
Cdd:TIGR02169 583 MRDERRDLSILSEDG-VIGFAVDLVEFDPKYEPAFKYVFGDTLVVEDIEAARrlMGKYRMvtlegelfeKSGAMTGgSRA 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 473 ERAIKAMTPEQEETASLLSSVTQGMESayvspsgyrlvsetEWNLLQKEVHNAGNKLGRRCDMCSNYEKQLQGIQIQEAE 552
Cdd:TIGR02169 662 PRGGILFSRSEPAELQRLRERLEGLKR--------------ELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQ 727
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 553 TRDQISALVLRAQTSEILLEELQQTFSQAKRDVQEqmavlmqsrqqVSEELVRLQKDndslqgKHSLHVSLQQAEDFILP 632
Cdd:TIGR02169 728 LEQEEEKLKERLEELEEDLSSLEQEIENVKSELKE-----------LEARIEELEED------LHKLEEALNDLEARLSH 790
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 633 DTTEALRELVLKFRENIINVRTAADHMEEKLKAEiLFLKEQIQAEQclkenleETLQLEIENCKEEIASIsslKAELERI 712
Cdd:TIGR02169 791 SRIPEIQAELSKLEEEVSRIEARLREIEQKLNRL-TLEKEYLEKEI-------QELQEQRIDLKEQIKSI---EKEIENL 859
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 713 KVEKGQLESTLKEKSQQLESLQEMKVTLEEQLKRetaakvtIEQLMFEEKNKAQRLQTELDVSEQVQRDfvkLSQTLQAL 792
Cdd:TIGR02169 860 NGKKEELEEELEELEAALRDLESRLGDLKKERDE-------LEAQLRELERKIEELEAQIEKKRKRLSE---LKAKLEAL 929
|
...
gi 1926244577 793 SWE 795
Cdd:TIGR02169 930 EEE 932
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
19-266 |
2.46e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 51.21 E-value: 2.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 19 AELEKINAEFLRAQQQLEQEFNQKRAKFKELylakeEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENT 98
Cdd:TIGR02168 810 AELTLLNEEAANLRERLESLERRIAATERRL-----EDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERAS 884
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 99 KQEAIDEVKRQWREEVASLQAVmkETVRDYEHQFHHRLEQERTQWAQYRESTEREIADLRRRLSEGQ--EEENLENEMKK 176
Cdd:TIGR02168 885 LEEALALLRSELEELSEELREL--ESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYslTLEEAEALENK 962
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 177 AQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKvKELNHYLEAEKSCRTDLEMYVAVLNTQ-KSVLQEDAEKL 255
Cdd:TIGR02168 963 IEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERY-DFLTAQKEDLTEAKETLEEAIEEIDREaRERFKDTFDQV 1041
|
250
....*....|.
gi 1926244577 256 RKELHEVCHLL 266
Cdd:TIGR02168 1042 NENFQRVFPKL 1052
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
14-312 |
2.86e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 51.09 E-value: 2.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 14 LQQRVAELEKINAEFLRAQQQLEQ----EFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIK 89
Cdd:COG1196 222 LKELEAELLLLKLRELEAELEELEaeleELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 90 AIATVSENTKQEA---IDEVKRQWREEVASLQAVmKETVRDYEHQFHHRLEQERTQWAQYRESTEREIADLRRRLSEGQE 166
Cdd:COG1196 302 QDIARLEERRRELeerLEELEEELAELEEELEEL-EEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEE 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 167 EENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKS 246
Cdd:COG1196 381 LEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEA 460
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1926244577 247 VLQEDAEKLRKElhevchllEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQ 312
Cdd:COG1196 461 LLELLAELLEEA--------ALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAG 518
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
9-342 |
5.53e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 50.12 E-value: 5.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 9 QPDVSLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQnAVLQAAQDDLGHLRT------QLWEAQ 82
Cdd:pfam17380 281 QKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQ-AAIYAEQERMAMEREreleriRQEERK 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 83 AEMENIKAIATVSENTKQEAID--EVKRQWREEVA--SLQAVMKETVRDYEHQfhHRLEQERTQWAQYRESTEREIADLR 158
Cdd:pfam17380 360 RELERIRQEEIAMEISRMRELErlQMERQQKNERVrqELEAARKVKILEEERQ--RKIQQQKVEMEQIRAEQEEARQREV 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 159 RRLSE--GQEEENLENEMKKAQEDAEKLRSvvmpMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEm 236
Cdd:pfam17380 438 RRLEEerAREMERVRLEEQERQQQVERLRQ----QEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEE- 512
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 237 yvavlnTQKSVLQEDAEKLRKELHEvchllEQERQQHNQLKHTWQKAND--QFLESQRLLMRDMQRMEIV-LTSEQLRQV 313
Cdd:pfam17380 513 ------RKRKLLEKEMEERQKAIYE-----EERRREAEEERRKQQEMEErrRIQEQMRKATEERSRLEAMeREREMMRQI 581
|
330 340
....*....|....*....|....*....
gi 1926244577 314 EEMKKKDQEEDEQQRLNKRKDHKKPDAEE 342
Cdd:pfam17380 582 VESEKARAEYEATTPITTIKPIYRPRISE 610
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
15-366 |
6.82e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.14 E-value: 6.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 15 QQRVAELEKINAEFLRAQQQLEQEFNQKRaKFKELYLAKEEDLKRQNAVLQAAQDdlghlRTQLWEAQAEMENIKAIATV 94
Cdd:PTZ00121 1455 EAKKAEEAKKKAEEAKKADEAKKKAEEAK-KADEAKKKAEEAKKKADEAKKAAEA-----KKKADEAKKAEEAKKADEAK 1528
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 95 SENTKQEAiDEVKRQwrEEVASLQAVMK-ETVRDYEhqfhhrleqERTQWAQYRESTEREIADLRRRLSEGQEEENLENE 173
Cdd:PTZ00121 1529 KAEEAKKA-DEAKKA--EEKKKADELKKaEELKKAE---------EKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEE 1596
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 174 MKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVavlntQKSVLQEDAE 253
Cdd:PTZ00121 1597 VMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKI-----KAAEEAKKAE 1671
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 254 KLRKELHEVCHLLEQERQQHNQLKHTWQkandqflESQRLLMRDMQRMEIVLTSEQLRQVEEMKKKDQEEDEQQRLNKRK 333
Cdd:PTZ00121 1672 EDKKKAEEAKKAEEDEKKAAEALKKEAE-------EAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKK 1744
|
330 340 350
....*....|....*....|....*....|...
gi 1926244577 334 DHKKPDAEEEMKVPVVCALTHEESLAPLSNEEE 366
Cdd:PTZ00121 1745 KAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEK 1777
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
20-784 |
2.24e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 48.43 E-value: 2.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 20 ELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTK 99
Cdd:pfam02463 184 NLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKE 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 100 QEAIDEVKRQWREEVASLQavmketvrdyehqfhhRLEQERTQWAQYRESTEREIADLRRRLSEGQEE-ENLENEMKKAQ 178
Cdd:pfam02463 264 EEKLAQVLKENKEEEKEKK----------------LQEEELKLLAKEEEELKSELLKLERRKVDDEEKlKESEKEKKKAE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 179 EDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNH----------YLEAEKSCRTDLEMYVAVLNTQKSVL 248
Cdd:pfam02463 328 KELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLeeellakkklESERLSSAAKLKEEELELKSEEEKEA 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 249 QEDAEKLRKELHEVCHLL---------EQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEEMKKK 319
Cdd:pfam02463 408 QLLLELARQLEDLLKEEKkeeleileeEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLE 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 320 DQEEDEQQRLNKRKDHKkpdAEEEMKVPVVCALTHEESLAPLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSKSDNDMFK 399
Cdd:pfam02463 488 LLLSRQKLEERSQKESK---ARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQ 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 400 DGLRRAQSTDSLGTSGSLQSKALGYNYKAKSAGNLDESDFGPLVGADSVSENFDTASLGSLQMPSGFM-LTKDQERAIKA 478
Cdd:pfam02463 565 KLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTeLTKLKESAKAK 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 479 MTPEQEETASLLSSVTQGMESAYVSPSGYRLVSETEWNLLQKEVHNAGNKLGRRCDMCSNYEKQ-LQGIQIQEAETRDQI 557
Cdd:pfam02463 645 ESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREkEELKKLKLEAEELLA 724
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 558 SALVLRAQTSEILLEELQQTFSQAKRDVQEQMAVLMQSRQQVSEELVRLQKDNDSLQGKHSLHVSLQQaedfilpdtTEA 637
Cdd:pfam02463 725 DRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEK---------EEK 795
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 638 LRELVLKFRENIINVRTAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKG 717
Cdd:pfam02463 796 LKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLK 875
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1926244577 718 QLESTLKEKSQQLESLQEMKVTLEEQLKRETAAKVTIEQLMFEEKNKAQRLQTELDVSEQVQRDFVK 784
Cdd:pfam02463 876 EEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLL 942
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
22-320 |
2.53e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.21 E-value: 2.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 22 EKINAEFLRAQQQLEQEFNQKRAKfkelYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQE 101
Cdd:PTZ00121 1532 EAKKADEAKKAEEKKKADELKKAE----ELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKM 1607
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 102 AIDEVKRQWREEVASLQAVMKETVRDYEHQFHHRLEQERTQWAQYRESTEREIADLRRRLSEGQEEENLENEMKKAQEDA 181
Cdd:PTZ00121 1608 KAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE 1687
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 182 EKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMyvavlntqksvlQEDAEKLRKElhe 261
Cdd:PTZ00121 1688 KKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEED------------KKKAEEAKKD--- 1752
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1926244577 262 vchllEQERQQHNQLKHTWQKANDQFLESQRLLMRDmqrmEIVLTSEQLRQVEEMKKKD 320
Cdd:PTZ00121 1753 -----EEEKKKIAHLKKEEEKKAEEIRKEKEAVIEE----ELDEEDEKRRMEVDKKIKD 1802
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
15-345 |
2.67e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.21 E-value: 2.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 15 QQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIAT- 93
Cdd:PTZ00121 1376 AKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEe 1455
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 94 --VSENTKQEA-----IDEVKRQWREEVASLQAVMKETVRDYEHQFHHRLEQERTQWAQYRESTEREIADLRRRLSEGQE 166
Cdd:PTZ00121 1456 akKAEEAKKKAeeakkADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKK 1535
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 167 EENLEN--EMKKAQE--DAEKLRSVvmpmeKEIAALKDKLTEAEDK---------IKELEASKVKELNHYLEAEKSCRTD 233
Cdd:PTZ00121 1536 ADEAKKaeEKKKADElkKAEELKKA-----EEKKKAEEAKKAEEDKnmalrkaeeAKKAEEARIEEVMKLYEEEKKMKAE 1610
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 234 lEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKhtwqKANdqflESQRLLMRDMQRMEivltSEQLRQV 313
Cdd:PTZ00121 1611 -EAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELK----KAE----EENKIKAAEEAKKA----EEDKKKA 1677
|
330 340 350
....*....|....*....|....*....|..
gi 1926244577 314 EEMKKKDQEEDEQQRLNKRKDHKKPDAEEEMK 345
Cdd:PTZ00121 1678 EEAKKAEEDEKKAAEALKKEAEEAKKAEELKK 1709
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
108-337 |
2.92e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 48.01 E-value: 2.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 108 RQWREEVASLQAVMKETVRDYEhqfhhRLEQERTQWAQYRESTEREIADLRRRLSEGQEEEN-LENEMKKAQEDAEKLRS 186
Cdd:COG1196 235 RELEAELEELEAELEELEAELE-----ELEAELAELEAELEELRLELEELELELEEAQAEEYeLLAELARLEQDIARLEE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 187 VVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLL 266
Cdd:COG1196 310 RRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELL 389
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1926244577 267 EQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEEMKKKDQEEDEQQRLNKRKDHKK 337
Cdd:COG1196 390 EALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEA 460
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
13-214 |
4.37e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.22 E-value: 4.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 13 SLQQRVAELEKINAEFLRAQQQLE---------QEFNQKRAKFKEL-YLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQ 82
Cdd:COG4913 229 ALVEHFDDLERAHEALEDAREQIEllepirelaERYAAARERLAELeYLRAALRLWFAQRRLELLEAELEELRAELARLE 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 83 AEMENIKAiatvSENTKQEAIDEVKRQWRE----EVASLQAVMKetvrdyehqfhhRLEQERTQWAQYRESTEREIADLr 158
Cdd:COG4913 309 AELERLEA----RLDALREELDELEAQIRGnggdRLEQLEREIE------------RLERELEERERRRARLEALLAAL- 371
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1926244577 159 rRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEA 214
Cdd:COG4913 372 -GLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEA 426
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
16-346 |
4.99e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.06 E-value: 4.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 16 QRVAELEKINAEFLRAQQQLE-QEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLghlRTQLWEAQAEMENIKAIATV 94
Cdd:PTZ00121 1335 KKKAEEAKKAAEAAKAEAEAAaDEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKK---KADEAKKKAEEDKKKADELK 1411
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 95 SENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHHRLEQERTQWAQYRESTEREIAD-LRRRLSEGQEEENLENE 173
Cdd:PTZ00121 1412 KAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADeAKKKAEEAKKADEAKKK 1491
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 174 MKKAQEDAEKLRSvvmpmEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKScrtdlEMYVAVLNTQKSVLQEDAE 253
Cdd:PTZ00121 1492 AEEAKKKADEAKK-----AAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKA-----EEKKKADELKKAEELKKAE 1561
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 254 KLRKElhEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRM---------EIVLTSEQLRQVEEMKKKDQEED 324
Cdd:PTZ00121 1562 EKKKA--EEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMkaeeakkaeEAKIKAEELKKAEEEKKKVEQLK 1639
|
330 340
....*....|....*....|..
gi 1926244577 325 EQQRLNKRKDHKKPDAEEEMKV 346
Cdd:PTZ00121 1640 KKEAEEKKKAEELKKAEEENKI 1661
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
59-776 |
5.67e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.06 E-value: 5.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 59 RQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAVMK--ETVRDYEH----QF 132
Cdd:PTZ00121 1059 KAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKkaEDARKAEEarkaED 1138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 133 HHRLEQERTQWAQYRESTEREIADLRR-RLSEGQEEENLENEMKKAQE--DAEKLRSVVMPMEKEIAALKDKLTEAEDKI 209
Cdd:PTZ00121 1139 ARKAEEARKAEDAKRVEIARKAEDARKaEEARKAEDAKKAEAARKAEEvrKAEELRKAEDARKAEAARKAEEERKAEEAR 1218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 210 KELEASKVKELNHYLEAEKScrtdlemyvavlntqksvlQEDAEKLRKE-LHEVCHLLEQERQQHNQLKHTWQKANDQFL 288
Cdd:PTZ00121 1219 KAEDAKKAEAVKKAEEAKKD-------------------AEEAKKAEEErNNEEIRKFEEARMAHFARRQAAIKAEEARK 1279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 289 ESQRLLMRDMQRMEIVLTSEQLRQVEEMKKKDQEEDEQQRLNKRKDHKKPDAE------EEMKVPVVCALTHEESLA--- 359
Cdd:PTZ00121 1280 ADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADaakkkaEEAKKAAEAAKAEAEAAAdea 1359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 360 PLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSKSDnDMFKDGLRRAQSTDSLGTSGSLQSKALGYNYKAKSAGNLDEsdf 439
Cdd:PTZ00121 1360 EAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKAD-EAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADE--- 1435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 440 gplvgadsvsenfdtaslgslqmpsgfmLTKDQERAIKA--MTPEQEETASLLSSVTQGMESAYVSPSGYRLVSETEWNL 517
Cdd:PTZ00121 1436 ----------------------------AKKKAEEAKKAdeAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADE 1487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 518 LQKEVHNAGNKLGRRCDMCSNYEKQLQGIQIQEAETRDQisalvLRAQTSEILLEELQQTFSQAKRDVQEQMAVLMQSRQ 597
Cdd:PTZ00121 1488 AKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADE-----AKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEE 1562
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 598 QVSEELVRLQKDNDSLqgkhslhvSLQQAEdfILPDTTEALRELVLKFRENIINVRTaadhmEEKLKAEilflKEQIQAE 677
Cdd:PTZ00121 1563 KKKAEEAKKAEEDKNM--------ALRKAE--EAKKAEEARIEEVMKLYEEEKKMKA-----EEAKKAE----EAKIKAE 1623
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 678 QCLK-ENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQL---ESTLKEKSQQLESLQEMKVTLEEQLKRETAAKVT 753
Cdd:PTZ00121 1624 ELKKaEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEakkAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKK 1703
|
730 740
....*....|....*....|....*.
gi 1926244577 754 IEQL---MFEEKNKAQRLQTELDVSE 776
Cdd:PTZ00121 1704 AEELkkkEAEEKKKAEELKKAEEENK 1729
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
13-299 |
7.43e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 46.65 E-value: 7.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 13 SLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEE-DLKRQNavLQAAQDDLghlrtqlweaqaEMENIKAI 91
Cdd:pfam15921 573 NMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKkDAKIRE--LEARVSDL------------ELEKVKLV 638
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 92 ATVSENTKQ-EAIDEVKRQWREEVASLQAVMKETVRDYE---HQFHHRLEQERTqwaqyreSTEREIADLRRRLSEGQEE 167
Cdd:pfam15921 639 NAGSERLRAvKDIKQERDQLLNEVKTSRNELNSLSEDYEvlkRNFRNKSEEMET-------TTNKLKMQLKSAQSELEQT 711
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 168 ENLENEMKKAQEDAEKlrsVVMPMEKEIAALKDKLTEAEDKIKELEA--SKVKELNHYLEAEKScrtDLEMYVAVLNTQK 245
Cdd:pfam15921 712 RNTLKSMEGSDGHAMK---VAMGMQKQITAKRGQIDALQSKIQFLEEamTNANKEKHFLKEEKN---KLSQELSTVATEK 785
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1926244577 246 SVLQEDAEKLRKELHEVchlleqeRQQHNQLKHTWQKANDQFLESQRLLMRDMQ 299
Cdd:pfam15921 786 NKMAGELEVLRSQERRL-------KEKVANMEVALDKASLQFAECQDIIQRQEQ 832
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
540-773 |
1.05e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 1.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 540 EKQLQGIQIQEAETRDQISALVLRAQTSEILLEELQQTFSQAKRDVQEqmavLMQSRQQVSEELVRLQKDNDSLQGKhsl 619
Cdd:COG4942 26 EAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRA----LEQELAALEAELAELEKEIAELRAE--- 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 620 hvsLQQAEDFIlpdtTEALRELVLKFRENIINVRTAADHMEEKLKAEILFlkeqiqaeqclkENLEETLQLEIENCKEEI 699
Cdd:COG4942 99 ---LEAQKEEL----AELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYL------------KYLAPARREQAEELRADL 159
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1926244577 700 ASISSLKAELERIKVEKGQLESTLKEKSQQLESLQEMKVTLEEQLKRETAAKvtiEQLMFEEKNKAQRLQTELD 773
Cdd:COG4942 160 AELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAEL---AAELAELQQEAEELEALIA 230
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
138-331 |
1.06e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 138 QERTQWAQYRESTEREIADLRRRLSEGQ-EEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASK 216
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKkEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 217 VKELNHYLE----AEKSCR-------------TDLEMYVAVLNTQKSVLQEDAEKLRKELHEvchlLEQERQQHNQLKHT 279
Cdd:COG4942 100 EAQKEELAEllraLYRLGRqpplalllspedfLDAVRRLQYLKYLAPARREQAEELRADLAE----LAALRAELEAERAE 175
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1926244577 280 WQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEEMKKKDQEEDEQQRLNK 331
Cdd:COG4942 176 LEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
147-280 |
1.14e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 45.62 E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 147 RESTEREIADLRRRlsEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEAsKVKELNhyLEA 226
Cdd:COG2433 383 EELIEKELPEEEPE--AEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEEKDERIERLER-ELSEAR--SEE 457
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1926244577 227 EKSCRTDLEMyvavlntqkSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTW 280
Cdd:COG2433 458 RREIRKDREI---------SRLDREIERLERELEEERERIEELKRKLERLKELW 502
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
4-215 |
1.58e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 1.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 4 PGPAPQPDVSLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAkEEDLKRQNAVLQAAQDDLGHLRTQLWEAQA 83
Cdd:COG4942 12 ALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAAL-ERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 84 EMENIKAiatvSENTKQEAIDEV-------KRQWREEVASLQAVMKETVRDYehQFHHRLEQERTQWAQYRESTEREIAD 156
Cdd:COG4942 91 EIAELRA----ELEAQKEELAELlralyrlGRQPPLALLLSPEDFLDAVRRL--QYLKYLAPARREQAEELRADLAELAA 164
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1926244577 157 LRRRLSEGQEEenLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEAS 215
Cdd:COG4942 165 LRAELEAERAE--LEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQE 221
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
576-791 |
1.59e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 45.31 E-value: 1.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 576 QTFSQAKRDVQEQMAVLmqSRQQVSEELVRLQKDNDSLQGKHSLHVSLQQAEDfilpDTTEALRELVLKFRENIINVRTA 655
Cdd:COG1196 216 RELKEELKELEAELLLL--KLRELEAELEELEAELEELEAELEELEAELAELE----AELEELRLELEELELELEEAQAE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 656 adhmEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLKEKSQQLESLQE 735
Cdd:COG1196 290 ----EYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEE 365
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1926244577 736 MKVTLEEQLKRETAAKVTIEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQA 791
Cdd:COG1196 366 ALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEE 421
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
26-219 |
2.77e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.37 E-value: 2.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 26 AEFLRA--QQQLEQEFNQ---KRAKFKELYLAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENIKAIATVSENtKQ 100
Cdd:COG4717 40 LAFIRAmlLERLEKEADElfkPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELRE-EL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 101 EAIDEVKRQWR--EEVASLQAVMKETVRDYEHQFHHRleQERTQWAQYRESTEREIADLRRRLSEGQEEENL--ENEMKK 176
Cdd:COG4717 119 EKLEKLLQLLPlyQELEALEAELAELPERLEELEERL--EELRELEEELEELEAELAELQEELEELLEQLSLatEEELQD 196
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1926244577 177 AQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKE 219
Cdd:COG4717 197 LAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAA 239
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
622-792 |
2.91e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 44.62 E-value: 2.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 622 SLQQAEDFI---LPDTTEALREL---VLKFRE--NIINVRTAADHMEEKLK---AEILFLKEQIQAEQCLKENLEETLQL 690
Cdd:COG3206 172 EARKALEFLeeqLPELRKELEEAeaaLEEFRQknGLVDLSEEAKLLLQQLSeleSQLAEARAELAEAEARLAALRAQLGS 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 691 EIENCKEEIAS--ISSLKAELERIKVEKGQLESTLKEKSQQLESLQEMKVTLEEQLKRETA-AKVTIEQLMFEEKNKAQR 767
Cdd:COG3206 252 GPDALPELLQSpvIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQrILASLEAELEALQAREAS 331
|
170 180
....*....|....*....|....*
gi 1926244577 768 LQTELDVSEQVQRDFVKLSQTLQAL 792
Cdd:COG3206 332 LQAQLAQLEARLAELPELEAELRRL 356
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
540-751 |
3.17e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 3.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 540 EKQLQGIQIQEAETRDQISALVLRAQTSEILLEELQQTFSQAKRDVQEQMAVLMQSRQQVSEELVRLQKdndslQGKHSL 619
Cdd:COG4942 47 KKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRALYR-----LGRQPP 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 620 HVSLQQAEDFilpdtTEALRELVLkFRENIINVRTAADHMEEKLkAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEI 699
Cdd:COG4942 122 LALLLSPEDF-----LDAVRRLQY-LKYLAPARREQAEELRADL-AELAALRAELEAERAELEALLAELEEERAALEALK 194
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1926244577 700 ASISSLKAELERIKVEKGQLESTLKEKSQQLESLQEMKVTLEEQLKRETAAK 751
Cdd:COG4942 195 AERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
19-117 |
3.95e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 44.00 E-value: 3.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 19 AELEkINAEFLRAQQQLEQEFNQKRAKF---------KELYLAKE-EDLKRQNAVLQAAQDDLGHLRTQLWEAQAEMENI 88
Cdd:PRK12704 58 ALLE-AKEEIHKLRNEFEKELRERRNELqklekrllqKEENLDRKlELLEKREEELEKKEKELEQKQQELEKKEEELEEL 136
|
90 100 110
....*....|....*....|....*....|....*...
gi 1926244577 89 KA--------IATVS-ENTKQEAIDEVKRQWREEVASL 117
Cdd:PRK12704 137 IEeqlqelerISGLTaEEAKEILLEKVEEEARHEAAVL 174
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
133-343 |
4.74e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.96 E-value: 4.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 133 HHRLEQERTQWAQYrESTEREiadlrrRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLteAEDKIKEL 212
Cdd:pfam17380 280 HQKAVSERQQQEKF-EKMEQE------RLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERM--AMEREREL 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 213 EASKVKELNHYLEAEKSCRTDLEM-YVAVLNTQKSVLQEDAEKLRKELHEV--CHLLEQERQQHNQLKHTW------QKA 283
Cdd:pfam17380 351 ERIRQEERKRELERIRQEEIAMEIsRMRELERLQMERQQKNERVRQELEAArkVKILEEERQRKIQQQKVEmeqiraEQE 430
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1926244577 284 NDQFLESQRLLMRDMQRMEIVLTSEQLRQVEEMKKKDQEEDEQQR--LNKRKDHKKPDAEEE 343
Cdd:pfam17380 431 EARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKklELEKEKRDRKRAEEQ 492
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
14-322 |
5.21e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.90 E-value: 5.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 14 LQQRVAELEKINAEFLRAQQQLEQEFNQKR-----------AKFKELYLAKEEdLKRQNAVLQAAQDDLGHLRTQLWEAQ 82
Cdd:PRK03918 350 LEKRLEELEERHELYEEAKAKKEELERLKKrltgltpekleKELEELEKAKEE-IEEEISKITARIGELKKEIKELKKAI 428
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 83 AEMENIKAIATV-SENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHHRLEQERTQWAQYRESTEREIADLRRRL 161
Cdd:PRK03918 429 EELKKAKGKCPVcGRELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKEL 508
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 162 SEGQEEENLEnEMKKAQEDAEKLRSVVMPMEKEI----------AALKDKLTEAEDKIKELEaSKVKELNHYLEAEK-SC 230
Cdd:PRK03918 509 EEKLKKYNLE-ELEKKAEEYEKLKEKLIKLKGEIkslkkeleklEELKKKLAELEKKLDELE-EELAELLKELEELGfES 586
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 231 RTDLEM-----------YVAVLNTQKSV---------LQEDAEKLRKELHEVCHLLEQERQQHNQLK-----HTWQKAND 285
Cdd:PRK03918 587 VEELEErlkelepfyneYLELKDAEKELereekelkkLEEELDKAFEELAETEKRLEELRKELEELEkkyseEEYEELRE 666
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1926244577 286 QFLESQRLLMR--------DMQRMEIVLTSEQL-RQVEEMKKKDQE 322
Cdd:PRK03918 667 EYLELSRELAGlraeleelEKRREEIKKTLEKLkEELEEREKAKKE 712
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
540-791 |
5.21e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 43.90 E-value: 5.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 540 EKQLQGIQIQEAETRDQISALVLRAQTSEILLEELQQTFS--------QAKRDVQE----------QMAVLMQSRQQVSE 601
Cdd:TIGR02169 243 ERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKdlgeeeqlRVKEKIGEleaeiaslerSIAEKERELEDAEE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 602 ELVRLQKDNDSLQGKH---SLHVSLQQAEDFILPDTTEALRELVLKFRENIINVRTAADHMEEKLKAeilfLKEQIQAEQ 678
Cdd:TIGR02169 323 RLAKLEAEIDKLLAEIeelEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKD----YREKLEKLK 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 679 CLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLKEK-------SQQLESLQEMKVTLEEQLKRETAAK 751
Cdd:TIGR02169 399 REINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKaleikkqEWKLEQLAADLSKYEQELYDLKEEY 478
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1926244577 752 VTIEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQA 791
Cdd:TIGR02169 479 DRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKA 518
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
87-275 |
5.63e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.75 E-value: 5.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 87 NIKAIATVSEntKQEAIDEVKRQWREEVASLQAVMKETVRDYEHqfHHRLEQerTQWAQYR-ESTEREIADL---RRRLS 162
Cdd:COG4913 608 NRAKLAALEA--ELAELEEELAEAEERLEALEAELDALQERREA--LQRLAE--YSWDEIDvASAEREIAELeaeLERLD 681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 163 EGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE-----ASKVKELNHYLEAEKSCRTDLEM 236
Cdd:COG4913 682 ASSDDlAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQdrleaAEDLARLELRALLEERFAAALGD 761
|
170 180 190
....*....|....*....|....*....|....*....
gi 1926244577 237 yvAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQ 275
Cdd:COG4913 762 --AVERELRENLEERIDALRARLNRAEEELERAMRAFNR 798
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
75-223 |
5.82e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.23 E-value: 5.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 75 RTQLWEAQAEMENIKAIATVS-ENTKQEAIDEVKRQWreevaslqavmketvrdyehqfhHRLEQErtqwaQYRESTER- 152
Cdd:PRK12704 30 EAKIKEAEEEAKRILEEAKKEaEAIKKEALLEAKEEI-----------------------HKLRNE-----FEKELRERr 81
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1926244577 153 -EIADLRRRLSegQEEENLENEMkkaqEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHY 223
Cdd:PRK12704 82 nELQKLEKRLL--QKEENLDRKL----ELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERI 147
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
86-227 |
6.42e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 43.31 E-value: 6.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 86 ENIKAIATVSENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHhRLEQertqwaqYRESTEREIADLRRRLSEGQ 165
Cdd:COG2433 376 LSIEEALEELIEKELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVE-RLEA-------EVEELEAELEEKDERIERLE 447
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1926244577 166 EEenLENEMKKAQEDAEKLRSVVMpMEKEIAALKDKLTEAEDKIKELEaSKVKELNHYLEAE 227
Cdd:COG2433 448 RE--LSEARSEERREIRKDREISR-LDREIERLERELEEERERIEELK-RKLERLKELWKLE 505
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
565-824 |
6.69e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 43.35 E-value: 6.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 565 QTSEILLEELQQTFsqakRDVQEQMAVLMQSRQQVSEELVRLQKDNDSLQGK-HSLHVSLQQAEDFILPDT-----TEAL 638
Cdd:PLN02939 124 QLSDFQLEDLVGMI----QNAEKNILLLNQARLQALEDLEKILTEKEALQGKiNILEMRLSETDARIKLAAqekihVEIL 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 639 RELVLKFRENIINVRTAADHMEEKLKAEILFLKEqiqaeqclkENLeeTLQLEIENCKEEIASISSLKAELERIKVEKGQ 718
Cdd:PLN02939 200 EEQLEKLRNELLIRGATEGLCVHSLSKELDVLKE---------ENM--LLKDDIQFLKAELIEVAETEERVFKLEKERSL 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 719 LESTLKEKSQQLESLQEmKVTLEEQLKRETA-AKV-TIEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQALSWET 796
Cdd:PLN02939 269 LDASLRELESKFIVAQE-DVSKLSPLQYDCWwEKVeNLQDLLDRATNQVEKAALVLDQNQDLRDKVDKLEASLKEANVSK 347
|
250 260 270
....*....|....*....|....*....|..
gi 1926244577 797 FPS----VMAPLLTASTSFLAGSDHATlHTYM 824
Cdd:PLN02939 348 FSSykveLLQQKLKLLEERLQASDHEI-HSYI 378
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
15-345 |
8.01e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.21 E-value: 8.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 15 QQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDdlghlrTQLWEAQAEMENIKAIATV 94
Cdd:PTZ00121 1144 EARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAED------ARKAEAARKAEEERKAEEA 1217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 95 SENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEH--------QFHHRLEQERTQWAQYRESTEREIADLRRRLSE--- 163
Cdd:PTZ00121 1218 RKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEirkfeearMAHFARRQAAIKAEEARKADELKKAEEKKKADEakk 1297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 164 GQEEENLENEMKKAQE--DAEKLRSVVMPMEKEIAALKDKLTEA-----------EDKIKELEASKVKELNHYLEAEKSC 230
Cdd:PTZ00121 1298 AEEKKKADEAKKKAEEakKADEAKKKAEEAKKKADAAKKKAEEAkkaaeaakaeaEAAADEAEAAEEKAEAAEKKKEEAK 1377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 231 RTDLEMYVAVLNTQKS-VLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQflESQRLLMRDMQRMEIVLTSEQ 309
Cdd:PTZ00121 1378 KKADAAKKKAEEKKKAdEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKAD--EAKKKAEEAKKADEAKKKAEE 1455
|
330 340 350
....*....|....*....|....*....|....*.
gi 1926244577 310 LRQVEEMKKKDQEEDEQQRLNKRKDHKKPDAEEEMK 345
Cdd:PTZ00121 1456 AKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKK 1491
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
579-791 |
8.86e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 8.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 579 SQAKRDVQEQMAVLMQSRQQVSEELVRLQKDNDSLQGKhslhvsLQQAEDFILpDTTEALREL---VLKFRENIINVRTA 655
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQ------LAALERRIA-ALARRIRALeqeLAALEAELAELEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 656 ADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKA-------ELERIKVEKGQLESTLKEKSQ 728
Cdd:COG4942 92 IAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYlaparreQAEELRADLAELAALRAELEA 171
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1926244577 729 QLESLQEMKVTLEEQLKRETAAKVTIEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQA 791
Cdd:COG4942 172 ERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
15-160 |
9.07e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.98 E-value: 9.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 15 QQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELyLAKEEDLKRQnaVLQAAQDDLGHLRTQLWEAQAEMENIKAIAT- 93
Cdd:COG4913 287 QRRLELLEAELEELRAELARLEAELERLEARLDAL-REELDELEAQ--IRGNGGDRLEQLEREIERLERELEERERRRAr 363
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1926244577 94 ---------VSENTKQEAIDEVKRQWREEVASLQAVMKETvrdyeHQFHHRLEQERTQWAQYRESTEREIADLRRR 160
Cdd:COG4913 364 leallaalgLPLPASAEEFAALRAEAAALLEALEEELEAL-----EEALAEAEAALRDLRRELRELEAEIASLERR 434
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
80-277 |
1.12e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.59 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 80 EAQAEMENIKAIATVSENTKQ-----EAIDEVKRQWREEVASLQAV--MKETVRDYEHQ-FHHRLEQERTQWAQYRESTE 151
Cdd:COG4913 229 ALVEHFDDLERAHEALEDAREqiellEPIRELAERYAAARERLAELeyLRAALRLWFAQrRLELLEAELEELRAELARLE 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 152 REIADLRRRLSEGQEE-ENLENEMKKAQEDAEKlrsvvmPMEKEIAALKDKLTEAEDKIKELEAsKVKELNHYLEAEksc 230
Cdd:COG4913 309 AELERLEARLDALREElDELEAQIRGNGGDRLE------QLEREIERLERELEERERRRARLEA-LLAALGLPLPAS--- 378
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1926244577 231 RTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLK 277
Cdd:COG4913 379 AEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELE 425
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
35-271 |
1.43e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 42.33 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 35 LEQEFNQKRAKFKELylakEEDLKRQNAVLQAAQDDLG---HLRTQLWEAQAEMENIKAIATVSENTKQEAIDEVKRQwR 111
Cdd:PRK02224 211 LESELAELDEEIERY----EEQREQARETRDEADEVLEeheERREELETLEAEIEDLRETIAETEREREELAEEVRDL-R 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 112 EEVASLQAVMKETVRD--YEHQFHHRLEQERTQWAQYRESTEREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVV 188
Cdd:PRK02224 286 ERLEELEEERDDLLAEagLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEaESLREDADDLEERAEELREEA 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 189 MPMEKEIAALKDKLTEAEDKIKELEaSKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQ 268
Cdd:PRK02224 366 AELESELEEAREAVEDRREEIEELE-EEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEE 444
|
...
gi 1926244577 269 ERQ 271
Cdd:PRK02224 445 AEA 447
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
13-223 |
1.49e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.92 E-value: 1.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 13 SLQQRVAELEKiNAEFLRAQQqlEQEFNQKRAKFKELyLAKEEDLKRQNAVLQAA-----------QDDLGHLRTQLWEA 81
Cdd:PHA02562 192 HIQQQIKTYNK-NIEEQRKKN--GENIARKQNKYDEL-VEEAKTIKAEIEELTDEllnlvmdiedpSAALNKLNTAAAKI 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 82 QAEMENIKAIA------TVSENTKQEAIDEVKRqwreeVASLQAVMKETVRDYEhQFHHRLEQERTQWAQYRESTeREIA 155
Cdd:PHA02562 268 KSKIEQFQKVIkmyekgGVCPTCTQQISEGPDR-----ITKIKDKLKELQHSLE-KLDTAIDELEEIMDEFNEQS-KKLL 340
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1926244577 156 DLRRRLS-EGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLteaeDKIKELEASKVKELNHY 223
Cdd:PHA02562 341 ELKNKIStNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDEL----DKIVKTKSELVKEKYHR 405
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
151-272 |
1.56e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.06 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 151 EREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE-----ASKVKELN--- 221
Cdd:COG1579 16 DSELDRLEHRLKELPAElAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEeqlgnVRNNKEYEalq 95
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1926244577 222 HYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQ 272
Cdd:COG1579 96 KEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAE 146
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
660-767 |
2.55e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 41.30 E-value: 2.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 660 EEKLKAEILFLKEQIQAEQCLKE------NLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLKEKSQQLESL 733
Cdd:PRK12704 57 EALLEAKEEIHKLRNEFEKELRErrnelqKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEEL 136
|
90 100 110
....*....|....*....|....*....|....*..
gi 1926244577 734 QEMKVT-LEE--QLKRETAAKVTIEQLmfEEKNKAQR 767
Cdd:PRK12704 137 IEEQLQeLERisGLTAEEAKEILLEKV--EEEARHEA 171
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
546-779 |
3.43e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.16 E-value: 3.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 546 IQIQEAETRDQISALVLRAQTSEILLEELQQTFSQAKR-----DVQEQMAVLMQSRQQVSEELVRLQKDNDSLQGKHSLH 620
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQknglvDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAAL 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 621 VSLQQAEDFILPDTTEAlrELVLKFRENIINVRTAADHMEEKLKAE---ILFLKEQIQAeqclkenLEETLQLEIEncke 697
Cdd:COG3206 246 RAQLGSGPDALPELLQS--PVIQQLRAQLAELEAELAELSARYTPNhpdVIALRAQIAA-------LRAQLQQEAQ---- 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 698 eiASISSLKAELERIKVEKGQLESTLKEKSQQLESLQEMKVTLEEqLKRE-TAAKVTIEQLMfeeknkaQRLQtELDVSE 776
Cdd:COG3206 313 --RILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRR-LEREvEVARELYESLL-------QRLE-EARLAE 381
|
...
gi 1926244577 777 QVQ 779
Cdd:COG3206 382 ALT 384
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
7-322 |
3.45e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 41.11 E-value: 3.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 7 APQPDVSLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKelylAKEEDLKRQNAvLQAAQDDLGHLRTQ---LWEAQA 83
Cdd:TIGR00618 210 TPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKRE----AQEEQLKKQQL-LKQLRARIEELRAQeavLEETQE 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 84 EMENIKAIATVSENtkQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHHRLEQERTQWAQYRESTEREIADLRRRLSE 163
Cdd:TIGR00618 285 RINRARKAAPLAAH--IKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHE 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 164 gqEEENLENEMKKAQEDAEKLRSvvmpMEKEIAALKDKLteaedKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNT 243
Cdd:TIGR00618 363 --VATSIREISCQQHTLTQHIHT----LQQQKTTLTQKL-----QSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKK 431
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1926244577 244 QKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEEMKKKDQE 322
Cdd:TIGR00618 432 QQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSC 510
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
664-799 |
4.09e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 40.68 E-value: 4.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 664 KAEILFLKEQIQA--EQCLKENLeetlqLEIENCKEEIASISSLKAELERIKVEKG--QLESTLKEKSQQLESLQEMKV- 738
Cdd:PRK05771 8 KVLIVTLKSYKDEvlEALHELGV-----VHIEDLKEELSNERLRKLRSLLTKLSEAldKLRSYLPKLNPLREEKKKVSVk 82
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1926244577 739 TLEEQLKRETAAKVTIEQLMFEEKNKAQRLQTELDvseqvqrdfvKLSQTLQALS-WETFPS 799
Cdd:PRK05771 83 SLEELIKDVEEELEKIEKEIKELEEEISELENEIK----------ELEQEIERLEpWGNFDL 134
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
13-227 |
4.29e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.67 E-value: 4.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 13 SLQQRVAELEKINAEFLRAQQQLEQefnqkrakfkelylAKEEdlkrqnavLQAAQDDLGHLRTQLWEAQAEMENIKAIA 92
Cdd:COG4913 672 ELEAELERLDASSDDLAALEEQLEE--------------LEAE--------LEELEEELDELKGEIGRLEKELEQAEEEL 729
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 93 TVSENTKQEAIDEVKRQWREEVASL--QAVMKETVRDYEHQFHHRLEQERTQWAQYRESTEREIADLRRRLSEgqEEENL 170
Cdd:COG4913 730 DELQDRLEAAEDLARLELRALLEERfaAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPA--ETADL 807
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1926244577 171 ENEMKKAQEDAEKLRSVVmpmekeiaalKDKLTEAEDKIKELEAS----KVKELNHYLEAE 227
Cdd:COG4913 808 DADLESLPEYLALLDRLE----------EDGLPEYEERFKELLNEnsieFVADLLSKLRRA 858
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
14-185 |
5.87e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.14 E-value: 5.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 14 LQQRVAELEKINAEFLRAQ---QQLEQEFNQKRAKFKELY-----LAKEEDLKRQNAVLQAAQDDLGHLRTQLWEAQAEM 85
Cdd:COG4717 76 LEEELKEAEEKEEEYAELQeelEELEEELEELEAELEELReelekLEKLLQLLPLYQELEALEAELAELPERLEELEERL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 86 ENIKaiatvsenTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHhRLEQERTQWAQYRESTEREIADLRRRLSEGQ 165
Cdd:COG4717 156 EELR--------ELEEELEELEAELAELQEELEELLEQLSLATEEELQ-DLAEELEELQQRLAELEEELEEAQEELEELE 226
|
170 180
....*....|....*....|
gi 1926244577 166 EEENLENEMKKAQEDAEKLR 185
Cdd:COG4717 227 EELEQLENELEAAALEERLK 246
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
168-453 |
8.19e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 40.03 E-value: 8.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 168 ENLENEMKKAQEDAEKLRSvvmpmeKEIAAL-KDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDlemyvaVLNTQKS 246
Cdd:PTZ00108 1105 EKLNAELEKKEKELEKLKN------TTPKDMwLEDLDKFEEALEEQEEVEEKEIAKEQRLKSKTKGK------ASKLRKP 1172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 247 VLQEDAEKLR-KELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEEMKKKDQEEDE 325
Cdd:PTZ00108 1173 KLKKKEKKKKkSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKKSSVKRLKSKKNNSSK 1252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 326 QQRLNKRKDHKKPDAEEEMKVPVVCALTHEESLAPLSN----EEEHLDSTHGSVHSLDADLLLPSGDPFSKSdNDMFKDG 401
Cdd:PTZ00108 1253 SSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPSKrpdgESNGGSKPSSPTKKKVKKRLEGSLAALKKK-KKSEKKT 1331
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1926244577 402 LRRAQSTDSLGTSGSLQSKALGYNYKAKSAGNLDESDFGPLVGADSVSENFD 453
Cdd:PTZ00108 1332 ARKKKSKTRVKQASASQSSRLLRRPRKKKSDSSSEDDDDSEVDDSEDEDDED 1383
|
|
| HMMR_N |
pfam15905 |
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of ... |
661-773 |
8.22e-03 |
|
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of eukaryotic hyaluronan-mediated motility receptor proteins. The protein is functionally associated with BRCA1 and thus predicted to be a common, low-penetrance breast cancer candidate.
Pssm-ID: 464932 [Multi-domain] Cd Length: 329 Bit Score: 39.41 E-value: 8.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1926244577 661 EKLKAEILFLKEQIQAEQclKENLEEtlQLEIENCKEEIASISSLKAELERIKVEKGQLESTLKEKSQQLESLQ----EM 736
Cdd:pfam15905 194 EHSKGKVAQLEEKLVSTE--KEKIEE--KSETEKLLEYITELSCVSEQVEKYKLDIAQLEELLKEKNDEIESLKqsleEK 269
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1926244577 737 KVTLEEQLKRETA----AKVTIEQLMFEEKNKAQRLQTELD 773
Cdd:pfam15905 270 EQELSKQIKDLNEkcklLESEKEELLREYEEKEQTLNAELE 310
|
|
| |
