|
Name |
Accession |
Description |
Interval |
E-value |
| Rabaptin |
pfam03528 |
Rabaptin; |
107-591 |
0e+00 |
|
Rabaptin;
Pssm-ID: 367545 [Multi-domain] Cd Length: 486 Bit Score: 767.35 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 107 EISLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGQLRTQLWEARAEMENIKA 186
Cdd:pfam03528 3 DEDLQQRVAELEKENAEFYRLKQQLEAEFNQKRAKFKELYLAKEEDLKRQNAVLQEAQVELDALQNQLALARAEMENIKA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 187 IATVSENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEENL 266
Cdd:pfam03528 83 VATVSENTKQEAIDEVKSQWQEEVASLQAIMKETVREYEVQFHRRLEQERAQWNQYRESAEREIADLRRRLSEGQEEENL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 267 ENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQE 346
Cdd:pfam03528 163 EDEMKKAQEDAEKLRSVVMPMEKEIAALKAKLTEAEDKIKELEASKMKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQE 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 347 DAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLN 426
Cdd:pfam03528 243 DAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMESVLTSEQLRQVEEIKKKDQEEHKRARTH 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 427 KRKDPKKTDAEEEVKIPVVCALTHEEPSAQLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSKSDnDMFKDGLRRAQSTDS 506
Cdd:pfam03528 323 KEKETLKSDREHTVSIHAVFSPAGVETSAPLSNVEEQINSAHGSVHSLDTDVVLGAGDSFNKQE-DPFKEGLRRAQSTDS 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 507 LGTSGSLQSKALGYNCKAKSAGNLDESDFGPLVGADSVSENFDTASLGSLQMPSGFMLTKDQERAIKAMTPEQEETASLL 586
Cdd:pfam03528 402 LGSSSSLQHKFLGHNQKAKSAGNLDESDFGPLVGADSVSENFDTSSLGSLKMPSGFMLTKDQEKAIKAMTPEQEETASLL 481
|
....*
gi 1777529483 587 SSVTQ 591
Cdd:pfam03528 482 SSVTQ 486
|
|
| Rab5-bind |
pfam09311 |
Rabaptin-like protein; Members of this family are predominantly found in Rabaptin and allow ... |
629-935 |
2.75e-124 |
|
Rabaptin-like protein; Members of this family are predominantly found in Rabaptin and allow for binding to the GTPase Rab5. This interaction is necessary and sufficient for Rab5-dependent recruitment of Rabaptin5 to early endosomal membranes.
Pssm-ID: 462752 [Multi-domain] Cd Length: 307 Bit Score: 379.31 E-value: 2.75e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 629 CDMCSNYEKQLQGIQIQEAETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKQSTEDSSHQISALVLRAQASEILLEE 708
Cdd:pfam09311 1 CDMCSNYEKQLQAIQEQEAETRDQVKKLQEMLRQANDQLEKTMKDKKELEDKMNQLSEETSNQVSTLAKRNQKSETLLDE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 709 LQQAFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQQAEDFMLPDTAEALRELVLKYRENIINVR 788
Cdd:pfam09311 81 LQQAFSQAKRNFQDQLAVLMDSREQVSDELVRLQKDNESLQGKHSLHVSLQQAEKFDMPDTVQELQELVLKYREELIEVR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 789 TAADHVEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESL 868
Cdd:pfam09311 161 TAADHMEEKLKAEILFLKEQIQAEQCLKENLEETLQAEIENCKEEIASISSLKVELERIKAEKEQLENGLTEKIRQLEDL 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1777529483 869 QEMKITLEEQLKKETAAKVTVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQAD 935
Cdd:pfam09311 241 QTTKGSLETQLKKETNEKAAVEQLVFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQAD 307
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
133-934 |
1.09e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 82.03 E-value: 1.09e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 133 QEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGQLRTQLWEARAEMENIKAiATVSENTKQEAIDEVKRQWREEVAS 212
Cdd:TIGR02168 235 EELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQK-ELYALANEISRLEQQKQILRERLAN 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 213 LQAVMKETVRDYEHQFH--LRLEQERTQWAQYRESAEREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEK 289
Cdd:TIGR02168 314 LERQLEELEAQLEELESklDELAEELAELEEKLEELKEELESLEAELEELEAElEELESRLEELEEQLETLRSKVAQLEL 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 290 EIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCrtdLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQH 369
Cdd:TIGR02168 394 QIASLNNEIERLEARLERLEDRRERLQQEIEELLKKL---EEAELKELQAELEELEEELEELQEELERLEEALEELREEL 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 370 NQLKHTWQKANDQFLESQRLLmRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLnkrKDPKKTDAEEEVKIPVVC--- 446
Cdd:TIGR02168 471 EEAEQALDAAERELAQLQARL-DSLERLQENLEGFSEGVKALLKNQSGLSGILGVL---SELISVDEGYEAAIEAALggr 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 447 --ALTHEEPSAQLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSksdndmfkDGLRRAQSTDSLGTSGSLQSKALGYncka 524
Cdd:TIGR02168 547 lqAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGN--------DREILKNIEGFLGVAKDLVKFDPKL---- 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 525 ksagnldESDFGPLVGADSVSENFDTASLGSLQMPSGFML-TKDQERAIK--AMTPEQEETASLLSSVTQGMESAyvsps 601
Cdd:TIGR02168 615 -------RKALSYLLGGVLVVDDLDNALELAKKLRPGYRIvTLDGDLVRPggVITGGSAKTNSSILERRREIEEL----- 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 602 gyrlvsETEWNLLQKEVHNAgnklgrrcdmcsnyEKQLQGIQIQEAETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFI 681
Cdd:TIGR02168 683 ------EEKIEELEEKIAEL--------------EKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEV 742
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 682 KQSTEDSSHQISALVLRAQASEILLEELQQAFSQAKRdVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSlhvslqqa 761
Cdd:TIGR02168 743 EQLEERIAQLSKELTELEAEIEELEERLEEAEEELAE-AEAEIEELEAQIEQLKEELKALREALDELRAELT-------- 813
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 762 edfmlpDTAEALRELVLKYRENIINVRTAADHVEEkLKAEILFLKEQIqaeqclkenleETLQLEIENCKEEIASISSlk 841
Cdd:TIGR02168 814 ------LLNEEAANLRERLESLERRIAATERRLED-LEEQIEELSEDI-----------ESLAAEIEELEELIEELES-- 873
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 842 aELERIKVEKGQLESTLREKSQQLESL-----------QEMKITLEEQLKKETAAKVTVEQLMFEEKNKAQRL----QTE 906
Cdd:TIGR02168 874 -ELEALLNERASLEEALALLRSELEELseelreleskrSELRRELEELREKLAQLELRLEGLEVRIDNLQERLseeySLT 952
|
810 820
....*....|....*....|....*...
gi 1777529483 907 LDVSEQVQRDFVKLSQTLQVQLERIRQA 934
Cdd:TIGR02168 953 LEEAEALENKIEDDEEEARRRLKRLENK 980
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
230-938 |
1.18e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 78.95 E-value: 1.18e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 230 LRLEQERTQWAQYRESAEREIadlrrrlsegQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE 309
Cdd:TIGR02168 232 LRLEELREELEELQEELKEAE----------EELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 310 ASKV-------------KELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTW 376
Cdd:TIGR02168 302 QQKQilrerlanlerqlEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQL 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 377 QKAND---QFLESQRLLMRDMQRMEIVLTS---EQLRQVEELKKKDQEEDEQQRLNKRKDPKKTDAEEEVKIPVVCALTH 450
Cdd:TIGR02168 382 ETLRSkvaQLELQIASLNNEIERLEARLERledRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEE 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 451 EEPSAQLSNEE--EHLDSTHGSVHSLDADL-----LLPSGDPFSKSDNDMFKDGLRRAQSTDSLGTSGSLQSK------- 516
Cdd:TIGR02168 462 ALEELREELEEaeQALDAAERELAQLQARLdslerLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGyeaaiea 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 517 ALGYNC---------KAKSAGN-LDESDFGPLV--GADSVSENFDTASLG-SLQMPSGFMLTKDqeRAIKAMTPEQEETA 583
Cdd:TIGR02168 542 ALGGRLqavvvenlnAAKKAIAfLKQNELGRVTflPLDSIKGTEIQGNDReILKNIEGFLGVAK--DLVKFDPKLRKALS 619
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 584 SLLS------SVTQGMESAYVSPSGYRLVSE------TEWNLLQKEVHNAGNKLGRRCDMcSNYEKQLQGIQIQEAETRD 651
Cdd:TIGR02168 620 YLLGgvlvvdDLDNALELAKKLRPGYRIVTLdgdlvrPGGVITGGSAKTNSSILERRREI-EELEEKIEELEEKIAELEK 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 652 QVKKLQVMLRQANDQLEKTMKDKQELedfikqstEDSSHQISALVLRAQASEILLEELQQAFSQAKRDVQEQMAVLMQSR 731
Cdd:TIGR02168 699 ALAELRKELEELEEELEQLRKELEEL--------SRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERL 770
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 732 EQVSEELVRLQKDNDSLQgkhslhvslQQAEDFMlpDTAEALRELVLKYRENIINVRTAADHVEEKLkaeilflkEQIQA 811
Cdd:TIGR02168 771 EEAEEELAEAEAEIEELE---------AQIEQLK--EELKALREALDELRAELTLLNEEAANLRERL--------ESLER 831
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 812 EQCLKENLEETLQLEIENCKEEIAsisSLKAELERIKVEKGQLESTLREKSQQLESLQEMKITLEEQLKKETAAKVTVEQ 891
Cdd:TIGR02168 832 RIAATERRLEDLEEQIEELSEDIE---SLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELES 908
|
730 740 750 760
....*....|....*....|....*....|....*....|....*..
gi 1777529483 892 LMFEEKNKAQRLQTELdvsEQVQRDFVKLSQTLQVQLERIRQADSLE 938
Cdd:TIGR02168 909 KRSELRRELEELREKL---AQLELRLEGLEVRIDNLQERLSEEYSLT 952
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
636-917 |
2.15e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.96 E-value: 2.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 636 EKQLQGIQIQEAETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKQSTEDsSHQISALVLRAQASEILLEELQQAFSQ 715
Cdd:COG1196 238 EAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAE-EYELLAELARLEQDIARLEERRRELEE 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 716 AKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSlhvSLQQAEDfmlpDTAEALRELVLKYRENIINVRTAADHVE 795
Cdd:COG1196 317 RLEELEEELAELEEELEELEEELEELEEELEEAEEELE---EAEAELA----EAEEALLEAEAELAEAEEELEELAEELL 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 796 EKLKAEILFLKEQIQAEQclkenLEETLQLEIENCKEEIAsisSLKAELERIKVEKGQLESTLREKSQQLESLQEMKITL 875
Cdd:COG1196 390 EALRAAAELAAQLEELEE-----AEEALLERLERLEEELE---ELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEAL 461
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1777529483 876 EEQLKKETAAKVTVEQLMFEEKNKAQRLQTELDVSEQVQRDF 917
Cdd:COG1196 462 LELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADY 503
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
636-924 |
2.27e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 64.69 E-value: 2.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 636 EKQLQGIQIQEAetRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKQsTEDSSHQISALVLRAQASEILLEELQQAFSQ 715
Cdd:TIGR02168 226 ELALLVLRLEEL--REELEELQEELKEAEEELEELTAELQELEEKLEE-LRLEVSELEEEIEELQKELYALANEISRLEQ 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 716 AKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKhslhVSLQQAEDFMLPDTAEALRELVLKYRENIINVRTAADHVE 795
Cdd:TIGR02168 303 QKQILRERLANLERQLEELEAQLEELESKLDELAEE----LAELEEKLEELKEELESLEAELEELEAELEELESRLEELE 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 796 EKL---KAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKgqLESTLREKSQQLESLQEMK 872
Cdd:TIGR02168 379 EQLetlRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKE--LQAELEELEEELEELQEEL 456
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1777529483 873 ITLEEQLKKETAAKVTVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTL 924
Cdd:TIGR02168 457 ERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGV 508
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
110-430 |
3.77e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 64.31 E-value: 3.77e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 110 LQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKElylaKEEDLKRQNAVLQAAQDDLGQLRTQLWEARAEMENIKAIAT 189
Cdd:TIGR02168 689 LEEKIAELEKALAELRKELEELEEELEQLRKELEE----LSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIE 764
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 190 VSENTKQEAIDEVKRQwREEVASLQAVMKetvrdyehqfhlRLEQERTQWAQYRESAEREIADLRRRLSEGQEE-ENLEN 268
Cdd:TIGR02168 765 ELEERLEEAEEELAEA-EAEIEELEAQIE------------QLKEELKALREALDELRAELTLLNEEAANLRERlESLER 831
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 269 EMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEaskvKELNHYLEAekscRTDLEMYVAVLNTQKSVLQEDA 348
Cdd:TIGR02168 832 RIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELE----SELEALLNE----RASLEEALALLRSELEELSEEL 903
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 349 EKLRKELHEVCHLLEQERQQHNQLKHTWQKA-------NDQFLESQRLLMRDMQRMEIVLTSEQL---RQVEELKKKDQE 418
Cdd:TIGR02168 904 RELESKRSELRRELEELREKLAQLELRLEGLevridnlQERLSEEYSLTLEEAEALENKIEDDEEearRRLKRLENKIKE 983
|
330 340
....*....|....*....|
gi 1777529483 419 --------EDEQQRLNKRKD 430
Cdd:TIGR02168 984 lgpvnlaaIEEYEELKERYD 1003
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
107-379 |
4.33e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.72 E-value: 4.33e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 107 EISLQQRVAELEKINAEFLRAQQQ---LEQEFNQKRAKFKELylakEEDLKRQNAVLQAAQDDLGQLRTQLWEARAEMEN 183
Cdd:COG1196 252 EAELEELEAELAELEAELEELRLEleeLELELEEAQAEEYEL----LAELARLEQDIARLEERRRELEERLEELEEELAE 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 184 IKAiatvsentKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQwAQYRESAEREIADLRRRLSEGQEE 263
Cdd:COG1196 328 LEE--------ELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAEL-AEAEEELEELAEELLEALRAAAEL 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 264 ENLENEMKKAQEDAEKLRSVvmpMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSV 343
Cdd:COG1196 399 AAQLEELEEAEEALLERLER---LEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALL 475
|
250 260 270
....*....|....*....|....*....|....*...
gi 1777529483 344 LQEDAEKLRKELHEVC--HLLEQERQQHNQLKHTWQKA 379
Cdd:COG1196 476 EAALAELLEELAEAAArlLLLLEAEADYEGFLEGVKAA 513
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
109-438 |
2.60e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.16 E-value: 2.60e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 109 SLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQ---AAQDDLGQLRTQLWEARAEMENIK 185
Cdd:TIGR02169 678 RLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQeeeKLKERLEELEEDLSSLEQEIENVK 757
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 186 AiatvsentKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRL-SEGQEEE 264
Cdd:TIGR02169 758 S--------ELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLnRLTLEKE 829
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 265 NLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEAsKVKELNHYLEAEKSCRTDLEmyvavlnTQKSVL 344
Cdd:TIGR02169 830 YLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEA-ALRDLESRLGDLKKERDELE-------AQLREL 901
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 345 QEDAEKLRKElhevchlLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEE------------- 411
Cdd:TIGR02169 902 ERKIEELEAQ-------IEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQrveeeiralepvn 974
|
330 340
....*....|....*....|....*..
gi 1777529483 412 LKKKDQEEDEQQRLNKRKDPKKTDAEE 438
Cdd:TIGR02169 975 MLAIQEYEEVLKRLDELKEKRAKLEEE 1001
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
231-439 |
1.58e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 55.33 E-value: 1.58e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 231 RLEQERTQWAQYRESAEREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE 309
Cdd:COG1196 243 ELEAELEELEAELEELEAELAELEAELEELRLElEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 310 ASKVKELNHYLEAEKScrtdlemyVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRL 389
Cdd:COG1196 323 EELAELEEELEELEEE--------LEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA 394
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 1777529483 390 LMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLNKRKDPKKTDAEEE 439
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEAL 444
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
647-886 |
1.66e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.38 E-value: 1.66e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 647 AETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKQSTEdsshQISALVLRAQASEILLEELQQAFSQAKRDVQEQMAV 726
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALER----RIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 727 LMQSREQVSEELVRLQKdndslQGKHSLHVSLQQAEDFmlpdtAEALRelVLKYRENIINVRTAADHVEEKLKAEILFLK 806
Cdd:COG4942 99 LEAQKEELAELLRALYR-----LGRQPPLALLLSPEDF-----LDAVR--RLQYLKYLAPARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 807 EQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEMKITLEEQLKKETAAK 886
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
110-438 |
3.89e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 54.17 E-value: 3.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 110 LQQRVAELEKINAEFLRAQQQLEqefnqkrakfkelylakEEDLKRQNAVLQAAQDDLGQLRTQLWEARAEMENIkaiat 189
Cdd:COG1196 222 LKELEAELLLLKLRELEAELEEL-----------------EAELEELEAELEELEAELAELEAELEELRLELEEL----- 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 190 vsentkQEAIDEVKRQWREEVASLQAVMKEtvrdyehqfHLRLEQERTQWAQYRESAEREIADLRRRLSE-GQEEENLEN 268
Cdd:COG1196 280 ------ELELEEAQAEEYELLAELARLEQD---------IARLEERRRELEERLEELEEELAELEEELEElEEELEELEE 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 269 EMKKAQEDAEKLrsvvmpmEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKScRTDLEMYVAVLNTQKSVLQEDA 348
Cdd:COG1196 345 ELEEAEEELEEA-------EAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA-AAELAAQLEELEEAEEALLERL 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 349 EKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLNKR 428
Cdd:COG1196 417 ERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLL 496
|
330
....*....|
gi 1777529483 429 KDPKKTDAEE 438
Cdd:COG1196 497 LEAEADYEGF 506
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
144-439 |
7.05e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 53.40 E-value: 7.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 144 ELYLAKEEDLKRQNAVLQAAQDDlgQLRTQLWEARAEMENIKAiatvsentKQEAIDEVKRQWREEVASLQAVMKEtvrd 223
Cdd:COG1196 213 ERYRELKEELKELEAELLLLKLR--ELEAELEELEAELEELEA--------ELEELEAELAELEAELEELRLELEE---- 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 224 yehqfhLRLEQERTQwAQYRESAEREIADLRRRLSEGQEEENLENEMKKAQEDAEKLrsvvmpmEKEIAALKDKLTEAED 303
Cdd:COG1196 279 ------LELELEEAQ-AEEYELLAELARLEQDIARLEERRRELEERLEELEEELAEL-------EEELEELEEELEELEE 344
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 304 KIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQlkhtwQKANDQF 383
Cdd:COG1196 345 ELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEAL-----LERLERL 419
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1777529483 384 LESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLNKRKDPKKTDAEEE 439
Cdd:COG1196 420 EEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALL 475
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
107-362 |
8.50e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 53.02 E-value: 8.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 107 EISLQQRVAELEKInaefLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGQLRTQLWEARAEMENIKA 186
Cdd:COG1196 290 EYELLAELARLEQD----IARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEE 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 187 IATVSENTKQEAIDEVKRQWREEVASLQAvmketvrdyEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEENL 266
Cdd:COG1196 366 ALLEAEAELAEAEEELEELAEELLEALRA---------AAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEE 436
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 267 ENEMKKAQEDAEKLRSVVmpmEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQE 346
Cdd:COG1196 437 EEEEEEALEEAAEEEAEL---EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAA 513
|
250
....*....|....*.
gi 1777529483 347 DAEKLRKELHEVCHLL 362
Cdd:COG1196 514 LLLAGLRGLAGAVAVL 529
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
111-462 |
8.54e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.22 E-value: 8.54e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 111 QQRVAELEKINAEFLRAQQQLEQEFNQKRaKFKELYLAKEEDLKRQNAVLQAAQDdlgqlRTQLWEARAEMENIKAIATV 190
Cdd:PTZ00121 1455 EAKKAEEAKKKAEEAKKADEAKKKAEEAK-KADEAKKKAEEAKKKADEAKKAAEA-----KKKADEAKKAEEAKKADEAK 1528
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 191 SENTKQEAiDEVKRQwrEEVASLQAVMKETvrdyehqfHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEENLENEM 270
Cdd:PTZ00121 1529 KAEEAKKA-DEAKKA--EEKKKADELKKAE--------ELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEV 1597
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 271 KKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMYVavlntQKSVLQEDAEK 350
Cdd:PTZ00121 1598 MKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKI-----KAAEEAKKAEE 1672
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 351 LRKELHEVCHLLEQERQQHNQLKHTWQkandqflESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLNKRKD 430
Cdd:PTZ00121 1673 DKKKAEEAKKAEEDEKKAAEALKKEAE-------EAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKK 1745
|
330 340 350
....*....|....*....|....*....|..
gi 1777529483 431 PKKTDAEEEVKIPVVCALTHEEPSAQLSNEEE 462
Cdd:PTZ00121 1746 AEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEK 1777
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
116-949 |
1.33e-06 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 52.67 E-value: 1.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 116 ELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGQLRTQLWEARAEMENIKAIATVSENTK 195
Cdd:pfam02463 184 NLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKE 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 196 QEAIDEVKRQWREEvaslQAVMKETVRDYEHQFHLRLEQERTqwaqyRESAEREIADLRRRLsegqeeENLENEMKKAQE 275
Cdd:pfam02463 264 EEKLAQVLKENKEE----EKEKKLQEEELKLLAKEEEELKSE-----LLKLERRKVDDEEKL------KESEKEKKKAEK 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 276 DAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNH----------YLEAEKSCRTDLEMYVAVLNTQKSVLQ 345
Cdd:pfam02463 329 ELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLeeellakkklESERLSSAAKLKEEELELKSEEEKEAQ 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 346 EDAEKLRKELHEVCHLL---------EQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKD 416
Cdd:pfam02463 409 LLLELARQLEDLLKEEKkeeleileeEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLEL 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 417 QEEDEQQRLNKRKDPKKTDAEEEVKIPVVCALTHEEPSAQLSNEEEHLDSTHGSVHSLDADlllPSGDPFSKSDNDMFKD 496
Cdd:pfam02463 489 LLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAV---IVEVSATADEVEERQK 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 497 GLRRAQSTDSLGTSGSLQSKALGYNCKAKSAGNLDESDFGPLVGADSVSENFDTASLGSLQMPSGFMLTKDQERAIKAMT 576
Cdd:pfam02463 566 LVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKE 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 577 PEQEETASLLSSVTQGMESAYVSPSGYRLVSETEWNLLQKEVHNAGNKLGRRcdMCSNYEKQLQGIQIQEAETRDQVKKL 656
Cdd:pfam02463 646 SGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRR--QLEIKKKEQREKEELKKLKLEAEELL 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 657 QVMLRQANDQLEKTMKDKQELEDFIKQSTEDSSHQisalvlraqaSEILLEELQQAFSQAKRDVQEQMAVLMQSREQVSE 736
Cdd:pfam02463 724 ADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLK----------KEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKE 793
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 737 ELVRLQKDNDSLQGKHSLHVSLQQAEDFMLPDTAEALRELVLKYRENIINVRTAAdhvEEKLKAEILFLKEQIQAEQCLK 816
Cdd:pfam02463 794 EKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKL---EKLAEEELERLEEEITKEELLQ 870
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 817 ENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEMKITL----EEQLKKETAAKVTVEQL 892
Cdd:pfam02463 871 ELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEIllkyEEEPEELLLEEADEKEK 950
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*..
gi 1777529483 893 MFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILNDTKL 949
Cdd:pfam02463 951 EENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKL 1007
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
647-939 |
1.44e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 52.25 E-value: 1.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 647 AETRDQVKKLQvmlRQANdQLEKTMKDKQELEDFIKQSTedsSHQISALVLRAQASEILLEELQQAFSQAKRDVQEQMAV 726
Cdd:COG1196 196 GELERQLEPLE---RQAE-KAERYRELKEELKELEAELL---LLKLRELEAELEELEAELEELEAELEELEAELAELEAE 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 727 LMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQQAEDFMLPDTAEALRELVLKYRENIINVRTAADHVEEK--LKAEILF 804
Cdd:COG1196 269 LEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELeeLEEELEE 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 805 LKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEMKITLEEQLKKETA 884
Cdd:COG1196 349 AEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEE 428
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1777529483 885 AKVTVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLER 939
Cdd:COG1196 429 ALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELL 483
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
706-943 |
8.35e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.94 E-value: 8.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 706 LEELQ-QAFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKhslhvsLQQAEDfmlpdTAEALRELVLKYRENi 784
Cdd:COG1196 222 LKELEaELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAE------LEELRL-----ELEELELELEEAQAE- 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 785 invrtaadhvEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQ 864
Cdd:COG1196 290 ----------EYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAE 359
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1777529483 865 LESLQEMKITLEEQLKKETAAKVTVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAI 943
Cdd:COG1196 360 LAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEE 438
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
115-362 |
1.08e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 49.67 E-value: 1.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 115 AELEKINAEFLRAQQQLEQEFNQKRAKFKELylakeEDLKRQNAVLQAAQDDLGQLRTQLWEARAEMENIKAIATVSENT 194
Cdd:TIGR02168 810 AELTLLNEEAANLRERLESLERRIAATERRL-----EDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERAS 884
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 195 KQEAIDEVKRQWREEVASLQAVmkETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQ--EEENLENEMKK 272
Cdd:TIGR02168 885 LEEALALLRSELEELSEELREL--ESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYslTLEEAEALENK 962
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 273 AQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKvKELNHYLEAEKSCRTDLEMYVAVLNTQ-KSVLQEDAEKL 351
Cdd:TIGR02168 963 IEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERY-DFLTAQKEDLTEAKETLEEAIEEIDREaRERFKDTFDQV 1041
|
250
....*....|.
gi 1777529483 352 RKELHEVCHLL 362
Cdd:TIGR02168 1042 NENFQRVFPKL 1052
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
112-880 |
1.14e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 49.30 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 112 QRVAELEKINAEFLRAQQQLEQEFNQKRaKFKELYLAKEE-DLKRQNAVLQAAQDDLGQLRTQLWEARAEMENIKAIATV 190
Cdd:TIGR02169 184 ENIERLDLIIDEKRQQLERLRREREKAE-RYQALLKEKREyEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISE 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 191 SENTKQEA---IDEVKRQWREEVASLQAVMKETVRDYEHQfhlrleqertqwaqyRESAEREIADLRRRLSEGQEEE-NL 266
Cdd:TIGR02169 263 LEKRLEEIeqlLEELNKKIKDLGEEEQLRVKEKIGELEAE---------------IASLERSIAEKERELEDAEERLaKL 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 267 ENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEA---SKVKELNHYLEAEKSCRTDLEMYVAVLN---TQ 340
Cdd:TIGR02169 328 EAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAeleEVDKEFAETRDELKDYREKLEKLKREINelkRE 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 341 KSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRdmqrmeivlTSEQLRQVEELKKKDQEEd 420
Cdd:TIGR02169 408 LDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQ---------LAADLSKYEQELYDLKEE- 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 421 eQQRLNKRKdpkkTDAEEEVKIPVVCALTHEEPSAQLSNEEEHLDSTHGSVHSLDADLLlpsgdpfsksdndmfKDGLRR 500
Cdd:TIGR02169 478 -YDRVEKEL----SKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLG---------------SVGERY 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 501 AQSTDSLGtSGSLQSKALGYNCKAKSA------GNLDESDFGPLvgadsvSENFDTASLGSLQMPSGFMltkdqERAIKA 574
Cdd:TIGR02169 538 ATAIEVAA-GNRLNNVVVEDDAVAKEAiellkrRKAGRATFLPL------NKMRDERRDLSILSEDGVI-----GFAVDL 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 575 MTPEQEETASLL-----SSVTQGMESAYVSPSGYRLVSeTEWNLLQKEVHNAGNklgrrcdmcSNYEKQLQGIQIQEaet 649
Cdd:TIGR02169 606 VEFDPKYEPAFKyvfgdTLVVEDIEAARRLMGKYRMVT-LEGELFEKSGAMTGG---------SRAPRGGILFSRSE--- 672
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 650 RDQVKKLQVMLRQANDQLEKTMKDKQELE---DFIKQSTEDSSHQISALVLRAQaseiLLEELQQAFSQAKRDVQEQMAV 726
Cdd:TIGR02169 673 PAELQRLRERLEGLKRELSSLQSELRRIEnrlDELSQELSDASRKIGEIEKEIE----QLEQEEEKLKERLEELEEDLSS 748
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 727 LMQSREQVSEELVRLQKDNDSLQGK-HSLHVSLQQAEDFMLPDTAEALRELVLKYRENIINVRTAADHVEEKLKA----- 800
Cdd:TIGR02169 749 LEQEIENVKSELKELEARIEELEEDlHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRltlek 828
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 801 ------------EILFLKEQIQAEQCLKENLE---ETLQLEIENCKEEI-----------ASISSLKAELERIKVEKGQL 854
Cdd:TIGR02169 829 eylekeiqelqeQRIDLKEQIKSIEKEIENLNgkkEELEEELEELEAALrdlesrlgdlkKERDELEAQLRELERKIEEL 908
|
810 820
....*....|....*....|....*.
gi 1777529483 855 ESTLREKSQQLESLQEMKITLEEQLK 880
Cdd:TIGR02169 909 EAQIEKKRKRLSELKAKLEALEEELS 934
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
636-936 |
1.56e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.91 E-value: 1.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 636 EKQLQGIQIQEAETRDQVKKLQvmlRQANDQLE--KTMKDKQELEDFIK-QSTEDSSHQISALVLRAQASEILLEELQQA 712
Cdd:TIGR02169 183 EENIERLDLIIDEKRQQLERLR---REREKAERyqALLKEKREYEGYELlKEKEALERQKEAIERQLASLEEELEKLTEE 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 713 FSQAKRDVQEQMAVLMQSREQV----SEELVRLQKDNDSLQGKHSLHVSLQQAEDFMLPDTAEALRELVLKYRENIINVR 788
Cdd:TIGR02169 260 ISELEKRLEEIEQLLEELNKKIkdlgEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIE 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 789 TAADHVEE------KLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKS 862
Cdd:TIGR02169 340 ELEREIEEerkrrdKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLS 419
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1777529483 863 QQLESLqEMKITLEEQLKKETAAKVTVEQLmfEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADS 936
Cdd:TIGR02169 420 EELADL-NAAIAGIEAKINELEEEKEDKAL--EIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQR 490
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
109-310 |
2.53e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.37 E-value: 2.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 109 SLQQRVAELEKINAEFLRAQQQLEQeFNQKRAKFKElYLAKEEDLKRQNAVLQAAQDDLGQLRTQLWEAR--------AE 180
Cdd:COG4913 229 ALVEHFDDLERAHEALEDAREQIEL-LEPIRELAER-YAAARERLAELEYLRAALRLWFAQRRLELLEAEleelraelAR 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 181 MENIKAIATVSENTKQEAIDEVKRQWRE----EVASLQAVMKetvrdyehqfhlRLEQERTQWAQYRESAEREIADLrrR 256
Cdd:COG4913 307 LEAELERLEARLDALREELDELEAQIRGnggdRLEQLEREIE------------RLERELEERERRRARLEALLAAL--G 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1777529483 257 LSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEA 310
Cdd:COG4913 373 LPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEA 426
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
122-315 |
2.56e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 48.23 E-value: 2.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 122 AEFLRA--QQQLEQEFNQ---KRAKFKELYLAKEEDLKRQNAVLQAAQDDLGQLRTQLWEARAEMENIKAIATVSENtKQ 196
Cdd:COG4717 40 LAFIRAmlLERLEKEADElfkPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELRE-EL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 197 EAIDEVKRQWR--EEVASLQAVMKETVRDYEHqfHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEENL--ENEMKK 272
Cdd:COG4717 119 EKLEKLLQLLPlyQELEALEAELAELPERLEE--LEERLEELRELEEELEELEAELAELQEELEELLEQLSLatEEELQD 196
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1777529483 273 AQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKE 315
Cdd:COG4717 197 LAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAA 239
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
123-922 |
3.14e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 48.04 E-value: 3.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 123 EFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDDLGQLRTQLWEARAEMENIKAIATVSENTKQEAIDEV 202
Cdd:pfam02463 219 LELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEEL 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 203 KRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEENLENEMKKAQEDAEKLRS 282
Cdd:pfam02463 299 KSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAK 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 283 VVMPMEKEIAALKDK-LTEAEDKIKELEASKVKEL-NHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCH 360
Cdd:pfam02463 379 KKLESERLSSAAKLKeEELELKSEEEKEAQLLLELaRQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQEL 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 361 LLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLNKRKDPKKTDAEE-- 438
Cdd:pfam02463 459 KLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVav 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 439 ---EVKIPVVCAlTHEEPSAQLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSKSDNDMFKDGLRRAQSTDSLGTSGSLQS 515
Cdd:pfam02463 539 enyKVAISTAVI-VEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADE 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 516 KALGYNCKAKSAGNLDESDFGPLVGADSVSENFDTASLGSLQMPSGFMLTKDQERAIKAMTPEQEETASLLSSvTQGMES 595
Cdd:pfam02463 618 DDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELA-KEEILR 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 596 AYVSPSGYRLVSETEWNLLQKEVHNAGNKLGRRCDMCSNYEKQLQGIQIQEAETRDQVKKLQVMLRQANDQLEKTMKDKQ 675
Cdd:pfam02463 697 RQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKEL 776
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 676 --ELEDFIKQSTEDSSHQISALVLR--------------AQASEILLEELQQAFSQAKRDVQEQMAVLMQSREQVSEELV 739
Cdd:pfam02463 777 aeEREKTEKLKVEEEKEEKLKAQEEelraleeelkeeaeLLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEEL 856
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 740 RLQKDNDSLQGKHSLHVSLQQAEDFMLPDTAEALRELVLKYRENIINVRTAADHVEEKLKAEILFLKEQIQAEQCLKENL 819
Cdd:pfam02463 857 ERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEE 936
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 820 EETLQLEIENCKEEIAS-ISSLKAELERIKVEKGQLESTLREKSQQLESLQEMKITLEEQLKKETAAKVTVEQLMFEEKn 898
Cdd:pfam02463 937 PEELLLEEADEKEKEENnKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEET- 1015
|
810 820
....*....|....*....|....
gi 1777529483 899 kAQRLQTELDVSEQVQRDFVKLSQ 922
Cdd:pfam02463 1016 -CQRLKEFLELFVSINKGWNKVFF 1038
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
118-438 |
4.24e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.83 E-value: 4.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 118 EKINAEFLRAQQQLEQEFNQKRAKfkelYLAKEEDLKRQNAVLQAAQDDLGQLRTQLWEARAEMENIKAIATVSENTKQE 197
Cdd:PTZ00121 1532 EAKKADEAKKAEEKKKADELKKAE----ELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKM 1607
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 198 AIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEENLENEMKKAQEDA 277
Cdd:PTZ00121 1608 KAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE 1687
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 278 EKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDLEMyvavlntqksvlQEDAEKLRKElhe 357
Cdd:PTZ00121 1688 KKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEED------------KKKAEEAKKD--- 1752
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 358 vchllEQERQQHNQLKHTWQKANDQFLESQRLLMRDmqrmEIVLTSEQLRQVEELKKKDQEEDEQ--QRLNKRKDPKKTD 435
Cdd:PTZ00121 1753 -----EEEKKKIAHLKKEEEKKAEEIRKEKEAVIEE----ELDEEDEKRRMEVDKKIKDIFDNFAniIEGGKEGNLVIND 1823
|
...
gi 1777529483 436 AEE 438
Cdd:PTZ00121 1824 SKE 1826
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
155-911 |
4.61e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.44 E-value: 4.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 155 RQNAVLQAAQDDLGQLRTQLWEARAEMENIKAIATVSENTKQEAIDEVKRQWREEVASLQAVMK--ETVRDYEH----QF 228
Cdd:PTZ00121 1059 KAEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKkaEDARKAEEarkaED 1138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 229 HLRLEQERTQWAQYRESAEREIADLRR-RLSEGQEEENLENEMKKAQE--DAEKLRSVVMPMEKEIAALKDKLTEAEDKI 305
Cdd:PTZ00121 1139 ARKAEEARKAEDAKRVEIARKAEDARKaEEARKAEDAKKAEAARKAEEvrKAEELRKAEDARKAEAARKAEEERKAEEAR 1218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 306 KELEASKVKELNHYLEAEKScrtdlemyvavlntqksvlQEDAEKLRKE-LHEVCHLLEQERQQHNQLKHTWQKANDQFL 384
Cdd:PTZ00121 1219 KAEDAKKAEAVKKAEEAKKD-------------------AEEAKKAEEErNNEEIRKFEEARMAHFARRQAAIKAEEARK 1279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 385 ESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLNKRKDPKKTDAE------EEVKIPVVCALTHEEPSA--- 455
Cdd:PTZ00121 1280 ADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADaakkkaEEAKKAAEAAKAEAEAAAdea 1359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 456 QLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSKSDnDMFKDGLRRAQSTDSLGTSGSLQSKALGYNCKAKSAGNLDEsdf 535
Cdd:PTZ00121 1360 EAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKAD-EAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADE--- 1435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 536 gplvgadsvsenfdtaslgslqmpsgfmLTKDQERAIKAmtpeqeETASLLSSVTQGMESAYVSPSGYRLVSEtewnlLQ 615
Cdd:PTZ00121 1436 ----------------------------AKKKAEEAKKA------DEAKKKAEEAKKAEEAKKKAEEAKKADE-----AK 1476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 616 KEVhnagnklgrrcdmcsnyekqlqgiqiQEAETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKQSTEDSSHQisal 695
Cdd:PTZ00121 1477 KKA--------------------------EEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADE---- 1526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 696 vLRAQASEILLEELQQAFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLqgkhslhvSLQQAEDFMLPDTAEALRE 775
Cdd:PTZ00121 1527 -AKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNM--------ALRKAEEAKKAEEARIEEV 1597
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 776 LVLKYRENIINVRTAADHVEEKLKAeilflkEQIQAEQCLKENLEETLQLEiencKEEIASISSLKAELERIKVEKGQLE 855
Cdd:PTZ00121 1598 MKLYEEEKKMKAEEAKKAEEAKIKA------EELKKAEEEKKKVEQLKKKE----AEEKKKAEELKKAEEENKIKAAEEA 1667
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1777529483 856 STLRE---KSQQLESLQEMKITLEEQLKKETAAKVTVEQL---MFEEKNKAQRLQTELDVSE 911
Cdd:PTZ00121 1668 KKAEEdkkKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELkkkEAEEKKKAEELKKAEEENK 1729
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
112-442 |
5.15e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.44 E-value: 5.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 112 QRVAELEKINAEFLRAQQQLE-QEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDdlgQLRTQLWEARAEMENIKAIATV 190
Cdd:PTZ00121 1335 KKKAEEAKKAAEAAKAEAEAAaDEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEE---KKKADEAKKKAEEDKKKADELK 1411
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 191 SENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQWAQYRESAEREIAD-LRRRLSEGQEEENLENE 269
Cdd:PTZ00121 1412 KAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADeAKKKAEEAKKADEAKKK 1491
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 270 MKKAQEDAEKLRSvvmpmEKEIAALKDKLTEAEDKIKELEASKVKELNHYLEAEKScrtdlEMYVAVLNTQKSVLQEDAE 349
Cdd:PTZ00121 1492 AEEAKKKADEAKK-----AAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKA-----EEKKKADELKKAEELKKAE 1561
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 350 KLRKElhEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRM---------EIVLTSEQLRQVEELKKKDQEED 420
Cdd:PTZ00121 1562 EKKKA--EEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMkaeeakkaeEAKIKAEELKKAEEEKKKVEQLK 1639
|
330 340
....*....|....*....|..
gi 1777529483 421 EQQRLNKRKDPKKTDAEEEVKI 442
Cdd:PTZ00121 1640 KKEAEEKKKAEELKKAEEENKI 1661
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
109-413 |
6.68e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 47.04 E-value: 6.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 109 SLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEE-DLKRQNavLQAAQDDLgqlrtqlwearaEMENIKAI 187
Cdd:pfam15921 573 NMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKkDAKIRE--LEARVSDL------------ELEKVKLV 638
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 188 ATVSENTKQ-EAIDEVKRQWREEVASLQAVMKETVRDYEhqfhlrleQERTQWAQYRESAEREIADLRRRLSEGQEE-EN 265
Cdd:pfam15921 639 NAGSERLRAvKDIKQERDQLLNEVKTSRNELNSLSEDYE--------VLKRNFRNKSEEMETTTNKLKMQLKSAQSElEQ 710
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 266 LENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEA--SKVKELNHYLEAEKScrtDLEMYVAVLNTQKSV 343
Cdd:pfam15921 711 TRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEamTNANKEKHFLKEEKN---KLSQELSTVATEKNK 787
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 344 LQEDAEKLRKELHEVchlleqeRQQHNQLKHTWQKANDQFLESQRLLMRDMQRmEIVLTSEQLRQVEELK 413
Cdd:pfam15921 788 MAGELEVLRSQERRL-------KEKVANMEVALDKASLQFAECQDIIQRQEQE-SVRLKLQHTLDVKELQ 849
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
705-940 |
1.29e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.78 E-value: 1.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 705 LLEELQQAFSQakRDVQEQMAVLMQSREQVSEELVRLQKDndslqgkhslhvsLQQAEdfmlpdtaEALRELvlKYRENI 784
Cdd:COG3206 153 VANALAEAYLE--QNLELRREEARKALEFLEEQLPELRKE-------------LEEAE--------AALEEF--RQKNGL 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 785 INVRTAADHVEEKLK---AEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIAS--ISSLKAELERIKVEKGQLESTLR 859
Cdd:COG3206 208 VDLSEEAKLLLQQLSeleSQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSpvIQQLRAQLAELEAELAELSARYT 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 860 EKSQQLESLQEMKITLEEQLKKEtaakvtVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTL---QVQLERI-RQAD 935
Cdd:COG3206 288 PNHPDVIALRAQIAALRAQLQQE------AQRILASLEAELEALQAREASLQAQLAQLEARLAELpelEAELRRLeREVE 361
|
....*
gi 1777529483 936 SLERI 940
Cdd:COG3206 362 VAREL 366
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
234-427 |
1.60e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 1.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 234 QERTQWAQYRESAEREIADLRRRLSEGQ-EEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASK 312
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKkEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 313 VKELNHYLE----AEKSCR-------------TDLEMYVAVLNTQKSVLQEDAEKLRKELHEvchlLEQERQQHNQLKHT 375
Cdd:COG4942 100 EAQKEELAEllraLYRLGRqpplalllspedfLDAVRRLQYLKYLAPARREQAEELRADLAE----LAALRAELEAERAE 175
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1777529483 376 WQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDEQQRLNK 427
Cdd:COG4942 176 LEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
130-422 |
2.07e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 45.21 E-value: 2.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 130 QLEQEFNQKRAKFkelylakEEDLKRQNAVLQAAQDDLGQLRTQLWEARAEMENIKAIATVSENT--------------K 195
Cdd:pfam12128 597 ASEEELRERLDKA-------EEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDlrrlfdekqsekdkK 669
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 196 QEAIDEVKRQWREEVASLQA---VMKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEG--QEEENLENEM 270
Cdd:pfam12128 670 NKALAERKDSANERLNSLEAqlkQLDKKHQAWLEEQKEQKREARTEKQAYWQVVEGALDAQLALLKAAiaARRSGAKAEL 749
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 271 KKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEA--SKVKELNHYLEAEKSCRTDlemyvaVLNTQKSVLQEDA 348
Cdd:pfam12128 750 KALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVrrQEVLRYFDWYQETWLQRRP------RLATQLSNIERAI 823
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 349 EKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLES---QRLLMRDMQRMEIVLTSEQ--------LRQVEELKKKDQ 417
Cdd:pfam12128 824 SELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENlrgLRCEMSKLATLKEDANSEQaqgsigerLAQLEDLKLKRD 903
|
....*
gi 1777529483 418 EEDEQ 422
Cdd:pfam12128 904 YLSES 908
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
771-954 |
2.14e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 45.31 E-value: 2.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 771 EALRELVLKYRENIINVRTAADHVEEKLKAEIlflkEQIQAEQCLKENLEETLQLEIENCKEEI----ASISSLKAELER 846
Cdd:COG1196 224 ELEAELLLLKLRELEAELEELEAELEELEAEL----EELEAELAELEAELEELRLELEELELELeeaqAEEYELLAELAR 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 847 IKVEKGQLESTLREKSQQLESLQEMKITLEEQLKKETAAKVTVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQV 926
Cdd:COG1196 300 LEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEE 379
|
170 180
....*....|....*....|....*...
gi 1777529483 927 QLERIRQADSLERIRAILNDTKLTDINQ 954
Cdd:COG1196 380 ELEELAEELLEALRAAAELAAQLEELEE 407
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
109-310 |
2.27e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 2.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 109 SLQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYL------AKEEDLKRQNAVLQAAQDDLGQLRTQLWEARAEME 182
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAAlerriaALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 183 NIKA-----IATVSENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRL 257
Cdd:COG4942 101 AQKEelaelLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALL 180
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1777529483 258 SEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEA 310
Cdd:COG4942 181 AELEEErAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEA 234
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
196-911 |
2.47e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 45.11 E-value: 2.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 196 QEAIDEVKRQWREEVASLQAVMKETVRDYEHQ-FHLRLEQERTQWAQYRESAERE-IADLRRRlsEGQEEENLENE---- 269
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNELHEKQkFYLRQSVIDLQTKLQEMQMERDaMADIRRR--ESQSQEDLRNQlqnt 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 270 --------------MKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAED----KIKELEASKVKELNHYLEAEKSCRTDLE 331
Cdd:pfam15921 151 vheleaakclkedmLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEasgkKIYEHDSMSTMHFRSLGSAISKILRELD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 332 MYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQH-NQL-------------KHTWQKANDQFLESQRLLMRDMQRM 397
Cdd:pfam15921 231 TEISYLKGRIFPVEDQLEALKSESQNKIELLLQQHQDRiEQLiseheveitglteKASSARSQANSIQSQLEIIQEQARN 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 398 EivlTSEQLRQVEELKKKDQEEDEQQRLNKRKDPKKTDAEEEVKIPVVCALTH-----EEPSAQLSNEEEHLDSTHGSVH 472
Cdd:pfam15921 311 Q---NSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEarterDQFSQESGNLDDQLQKLLADLH 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 473 SLDADLLLPSGDPFSKSDNDMFK----DGLRRAQSTDSLGTSgslQSKALGYNCKAKSAGNLDESdfgpLVGADSVSENF 548
Cdd:pfam15921 388 KREKELSLEKEQNKRLWDRDTGNsitiDHLRRELDDRNMEVQ---RLEALLKAMKSECQGQMERQ----MAAIQGKNESL 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 549 DTASLGSLQMPSGFMLTKD--QERAIKAMTPEQ-EETASLLSSVTQGMESAYVSPSGYRLVSETEWNLLQKEVHNAGNKl 625
Cdd:pfam15921 461 EKVSSLTAQLESTKEMLRKvvEELTAKKMTLESsERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNE- 539
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 626 grrCDMCSNYEKQLQGIQIQEAET-------RDQVKKLQVMLRQ----------ANDQLEKTMKDKQ-ELEDF--IKQST 685
Cdd:pfam15921 540 ---GDHLRNVQTECEALKLQMAEKdkvieilRQQIENMTQLVGQhgrtagamqvEKAQLEKEINDRRlELQEFkiLKDKK 616
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 686 EDSSHQISALVLRAQASEILLEELQQAFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQQAEDFM 765
Cdd:pfam15921 617 DAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNK 696
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 766 LPDTAEALRELVLKYRENIINVRTAADH---VEEKLKAEILFLKEQIQAEQCLKENLEETL---QLEIENCKEEIasiSS 839
Cdd:pfam15921 697 LKMQLKSAQSELEQTRNTLKSMEGSDGHamkVAMGMQKQITAKRGQIDALQSKIQFLEEAMtnaNKEKHFLKEEK---NK 773
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1777529483 840 LKAELERIKVEKGQLESTLREKSQQLESLQEMKITLEEQLKKETAAKVTVEQLMFEEKNKAQR--LQTELDVSE 911
Cdd:pfam15921 774 LSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQEQESVRlkLQHTLDVKE 847
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
247-376 |
2.51e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 44.85 E-value: 2.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 247 EREIADLRRRLSEGQEEENLENEMKKAQEDAE--KLRSVVMPMEKEIAALKDKLTEAEDKIKELEAsKVKELNhyLEAEK 324
Cdd:COG2433 383 EELIEKELPEEEPEAEREKEHEERELTEEEEEirRLEEQVERLEAEVEELEAELEEKDERIERLER-ELSEAR--SEERR 459
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 1777529483 325 SCRTDLEMyvavlntqkSVLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTW 376
Cdd:COG2433 460 EIRKDREI---------SRLDREIERLERELEEERERIEELKRKLERLKELW 502
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
107-312 |
2.52e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.01 E-value: 2.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 107 EISLQQRVAELEKInAEFLRAQ--------QQLEQEFNQKRAKFKELYLAKEEDLKRQNavLQAAQDDLGQLRTQLWEAR 178
Cdd:COG3206 163 EQNLELRREEARKA-LEFLEEQlpelrkelEEAEAALEEFRQKNGLVDLSEEAKLLLQQ--LSELESQLAEARAELAEAE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 179 AEMENIKAIATVSENTKQEAI-DEVKRQWREEVASLQAVMKETVRDY--EHQFHLRLEQE--------RTQWAQYRESAE 247
Cdd:COG3206 240 ARLAALRAQLGSGPDALPELLqSPVIQQLRAQLAELEAELAELSARYtpNHPDVIALRAQiaalraqlQQEAQRILASLE 319
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1777529483 248 REIADLRRRLSE-GQEEENLENEMKKAQEDAEKLRSvvmpMEKEIAALKDKLTEAEDKIKELEASK 312
Cdd:COG3206 320 AELEALQAREASlQAQLAQLEARLAELPELEAELRR----LEREVEVARELYESLLQRLEEARLAE 381
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
171-319 |
2.59e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 44.77 E-value: 2.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 171 RTQLWEARAEMENIKAIATVS-ENTKQEAIDEVKRQWreevaslqavmketvrdyehqFHLRLEQERtqwaQYREsAERE 249
Cdd:PRK12704 30 EAKIKEAEEEAKRILEEAKKEaEAIKKEALLEAKEEI---------------------HKLRNEFEK----ELRE-RRNE 83
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 250 IADLRRRLSegQEEENLENEMkkaqEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKELNHY 319
Cdd:PRK12704 84 LQKLEKRLL--QKEENLDRKL----ELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERI 147
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
183-371 |
4.02e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.52 E-value: 4.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 183 NIKAIATVSEntKQEAIDEVKRQWREEVASLQAVMKETVRdyehQFHLRLEQERTQWAQYR-ESAEREIADL---RRRLS 258
Cdd:COG4913 608 NRAKLAALEA--ELAELEEELAEAEERLEALEAELDALQE----RREALQRLAEYSWDEIDvASAEREIAELeaeLERLD 681
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 259 EGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE-----ASKVKELNHYLEAEKSCRTDLEM 332
Cdd:COG4913 682 ASSDDlAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQdrleaAEDLARLELRALLEERFAAALGD 761
|
170 180 190
....*....|....*....|....*....|....*....
gi 1777529483 333 yvAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQHNQ 371
Cdd:COG4913 762 --AVERELRENLEERIDALRARLNRAEEELERAMRAFNR 798
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
229-439 |
4.46e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.96 E-value: 4.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 229 HLRLEQERTQWAQYrESAEREiadlrrRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLteAEDKIKEL 308
Cdd:pfam17380 280 HQKAVSERQQQEKF-EKMEQE------RLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERM--AMEREREL 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 309 EASKVKELNHYLEAEKSCRTDLEM-YVAVLNTQKSVLQEDAEKLRKELHEV--CHLLEQERQQHNQLKHT------WQKA 379
Cdd:pfam17380 351 ERIRQEERKRELERIRQEEIAMEIsRMRELERLQMERQQKNERVRQELEAArkVKILEEERQRKIQQQKVemeqirAEQE 430
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1777529483 380 NDQFLESQRLLMRDMQRMEIVLTSEQLR--QVEELKKKDQEEDEQQRLNKRKDPKKTDAEEE 439
Cdd:pfam17380 431 EARQREVRRLEEERAREMERVRLEEQERqqQVERLRQQEEERKRKKLELEKEKRDRKRAEEQ 492
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
111-256 |
4.53e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.14 E-value: 4.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 111 QQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELyLAKEEDLKRQnaVLQAAQDDLGQLRTQLWEARAEMENIKAIAT- 189
Cdd:COG4913 287 QRRLELLEAELEELRAELARLEAELERLEARLDAL-REELDELEAQ--IRGNGGDRLEQLEREIERLERELEERERRRAr 363
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1777529483 190 ---------VSENTKQEAIDEVKRQWREEVASLQAvMKETVRDYEHQFHLRLEQERTQwaqyRESAEREIADLRRR 256
Cdd:COG4913 364 leallaalgLPLPASAEEFAALRAEAAALLEALEE-ELEALEEALAEAEAALRDLRRE----LRELEAEIASLERR 434
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
115-213 |
4.93e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.61 E-value: 4.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 115 AELEkINAEFLRAQQQLEQEFNQKRAKFKEL---YLAKEEDLKRQNAVLQAAQDDLGQLRTQLW---------------- 175
Cdd:PRK12704 58 ALLE-AKEEIHKLRNEFEKELRERRNELQKLekrLLQKEENLDRKLELLEKREEELEKKEKELEqkqqelekkeeeleel 136
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1777529483 176 --EARAEMENIKAIAtvSENTKQEAIDEVKRQWREEVASL 213
Cdd:PRK12704 137 ieEQLQELERISGLT--AEEAKEILLEKVEEEARHEAAVL 174
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
115-441 |
4.95e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 43.88 E-value: 4.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 115 AELEKINAEFLRAQQQLEQ------EFNQKRAKFKELylakEEDLKRQNAVLQAAQDDLGQLRTQLWEARAEMENIKAIA 188
Cdd:PRK02224 220 EEIERYEEQREQARETRDEadevleEHEERREELETL----EAEIEDLRETIAETEREREELAEEVRDLRERLEELEEER 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 189 T--VSENTKQEAIDEVKRQWREEVASlqavMKETVRDyehqfhlRLEQERTQWAQYRESAER---EIADLRRRLSEGQEE 263
Cdd:PRK02224 296 DdlLAEAGLDDADAEAVEARREELED----RDEELRD-------RLEECRVAAQAHNEEAESlreDADDLEERAEELREE 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 264 -ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE---ASKVKELNHYLEAEKSCRTDLEMYVAVLNT 339
Cdd:PRK02224 365 aAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEdflEELREERDELREREAELEATLRTARERVEE 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 340 QKSVLQE-----------------DAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDqFLESQRLLMRDMQRMEivlT 402
Cdd:PRK02224 445 AEALLEAgkcpecgqpvegsphveTIEEDRERVEELEAELEDLEEEVEEVEERLERAED-LVEAEDRIERLEERRE---D 520
|
330 340 350
....*....|....*....|....*....|....*....
gi 1777529483 403 SEQLRqveELKKKDQEEDEQQRLNKRKDPKKTDAEEEVK 441
Cdd:PRK02224 521 LEELI---AERRETIEEKRERAEELRERAAELEAEAEEK 556
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
770-954 |
5.19e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 43.89 E-value: 5.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 770 AEALRELVLKYREniINVRTAADHVEEkLKAEILFLKEQIQAEQCLKENLE----------ETLQLEIENCKEEIAS--- 836
Cdd:TIGR02168 212 AERYKELKAELRE--LELALLVLRLEE-LREELEELQEELKEAEEELEELTaelqeleeklEELRLEVSELEEEIEElqk 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 837 --------ISSLKAELERIKVEKGQLESTLREKSQQLESLQEMKITLEEQLKKETAAKVTVEQLMFEEKNKAQRLQTELD 908
Cdd:TIGR02168 289 elyalaneISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELE 368
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1777529483 909 VSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILNDTKLTDINQ 954
Cdd:TIGR02168 369 ELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLED 414
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
770-957 |
6.19e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 43.77 E-value: 6.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 770 AEALRELVLKYRENIINVRTAADHVEEKLKAEILFLKEQIQAEQCLK---ENLEETLQLEIENCKEEIASISSLKAELER 846
Cdd:COG1196 248 LEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLaelARLEQDIARLEERRRELEERLEELEEELAE 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 847 IKVEKGQLESTLREKSQQLESLQEMKITLEEQLKKETAAKVTVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQV 926
Cdd:COG1196 328 LEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEE 407
|
170 180 190
....*....|....*....|....*....|.
gi 1777529483 927 QLERIRQADSLERIRAILNDTKLTDINQLPE 957
Cdd:COG1196 408 AEEALLERLERLEEELEELEEALAELEEEEE 438
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
713-936 |
6.47e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 43.79 E-value: 6.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 713 FSQAKRDvqEQMAVLMQSREQVSEELVRLQKDNDSLQgkhSLHvslQQAEDFM--------LPDTAEALRELVLKYREnI 784
Cdd:PRK04863 779 FGRAARE--KRIEQLRAEREELAERYATLSFDVQKLQ---RLH---QAFSRFIgshlavafEADPEAELRQLNRRRVE-L 849
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 785 INVRTAADHVEEKLKAEILFLKEQIQA-EQCLKEN---LEETLQLEIENCKEEIASISSLKAELERIKVEKGQLE---ST 857
Cdd:PRK04863 850 ERALADHESQEQQQRSQLEQAKEGLSAlNRLLPRLnllADETLADRVEEIREQLDEAEEAKRFVQQHGNALAQLEpivSV 929
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 858 LREKSQQLESLQEMKITLEEQLKKETAAKVTVEQLM-----FEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIR 932
Cdd:PRK04863 930 LQSDPEQFEQLKQDYQQAQQTQRDAKQQAFALTEVVqrrahFSYEDAAEMLAKNSDLNEKLRQRLEQAEQERTRAREQLR 1009
|
....
gi 1777529483 933 QADS 936
Cdd:PRK04863 1010 QAQA 1013
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
110-433 |
8.11e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.51 E-value: 8.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 110 LQQRVAELEKINAEFLRAQQQLEQEFNQKR-----------AKFKELYLAKEEDLKRQNAVLqaaqDDLGQLRTQLWEAR 178
Cdd:PRK03918 350 LEKRLEELEERHELYEEAKAKKEELERLKKrltgltpekleKELEELEKAKEEIEEEISKIT----ARIGELKKEIKELK 425
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 179 AEMENIKAIATVSENTKQEAIDE----VKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLR 254
Cdd:PRK03918 426 KAIEELKKAKGKCPVCGRELTEEhrkeLLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQL 505
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 255 RRLSEGQEEENLEnEMKKAQEDAEKLRSVVMPMEKEI----------AALKDKLTEAEDKIKELEaSKVKELNHYLEAEK 324
Cdd:PRK03918 506 KELEEKLKKYNLE-ELEKKAEEYEKLKEKLIKLKGEIkslkkeleklEELKKKLAELEKKLDELE-EELAELLKELEELG 583
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 325 -SCRTDLEM-----------YVAVLNTQKSV---------LQEDAEKLRKELHEVCHLLEQERQQHNQLK-----HTWQK 378
Cdd:PRK03918 584 fESVEELEErlkelepfyneYLELKDAEKELereekelkkLEEELDKAFEELAETEKRLEELRKELEELEkkyseEEYEE 663
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1777529483 379 ANDQFLESQRLLMRDMQRMEivltsEQLRQVEELKK--KDQEEDEQQRLNKRKDPKK 433
Cdd:PRK03918 664 LREEYLELSRELAGLRAELE-----ELEKRREEIKKtlEKLKEELEEREKAKKELEK 715
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
111-441 |
8.81e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.59 E-value: 8.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 111 QQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEDLKRQNAVLQAAQDdlgqlrTQLWEARAEMENIKAIATV 190
Cdd:PTZ00121 1144 EARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAED------ARKAEAARKAEEERKAEEA 1217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 191 SENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEH--------QFHLRLEQERTQWAQYRESAEREIADLRRRLSE--- 259
Cdd:PTZ00121 1218 RKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEirkfeearMAHFARRQAAIKAEEARKADELKKAEEKKKADEakk 1297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 260 GQEEENLENEMKKAQE--DAEKLRSVVMPMEKEIAALKDKLTEA-----------EDKIKELEASKVKELNHYLEAEKSC 326
Cdd:PTZ00121 1298 AEEKKKADEAKKKAEEakKADEAKKKAEEAKKKADAAKKKAEEAkkaaeaakaeaEAAADEAEAAEEKAEAAEKKKEEAK 1377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 327 RTDLEMYVAVLNTQKS-VLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQflESQRLLMRDMQRMEIVLTSEQ 405
Cdd:PTZ00121 1378 KKADAAKKKAEEKKKAdEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKAD--EAKKKAEEAKKADEAKKKAEE 1455
|
330 340 350
....*....|....*....|....*....|....*.
gi 1777529483 406 LRQVEELKKKDQEEDEQQRLNKRKDPKKTDAEEEVK 441
Cdd:PTZ00121 1456 AKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKK 1491
|
|
| FPP |
pfam05911 |
Filament-like plant protein, long coiled-coil; FPP is a family of long coiled-coil plant ... |
799-931 |
1.06e-03 |
|
Filament-like plant protein, long coiled-coil; FPP is a family of long coiled-coil plant proteins that are filament-like. It interacts with the nuclear envelope-associated protein, MAF1, the WPP family pfam13943.
Pssm-ID: 461778 [Multi-domain] Cd Length: 859 Bit Score: 43.13 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 799 KAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIA-------SISSLKAELERIKVEKGQLEStlreksqQLESLQEM 871
Cdd:pfam05911 680 TEENKRLKEEFEQLKSEKENLEVELASCTENLESTKSqlqeseqLIAELRSELASLKESNSLAET-------QLKCMAES 752
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 872 KITLEEQLkkeTAAKVTVEQLmfeeKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERI 931
Cdd:pfam05911 753 YEDLETRL---TELEAELNEL----RQKFEALEVELEEEKNCHEELEAKCLELQEQLERN 805
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
711-942 |
1.13e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 711 QAFSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKhslhvsLQQAEDfMLPDTAEALREL---VLKYRENIINV 787
Cdd:COG4942 16 AAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQ------LAALER-RIAALARRIRALeqeLAALEAELAEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 788 RTAADHVEEKLKAEILFLKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLES 867
Cdd:COG4942 89 EKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAE 168
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1777529483 868 LQEMKITLEEQLKKETAAKVTVEQLMFEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQvqleriRQADSLERIRA 942
Cdd:COG4942 169 LEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELE------ALIARLEAEAA 237
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
650-925 |
1.13e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 42.97 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 650 RDQVKKLQVMLRQANDQLEKTMKDKQELEDFI--------KQSTEDSSHQISALVLRAQASEILLEELQQAFSQAK---- 717
Cdd:PLN02939 48 KKRGKNIAPKQRSSNSKLQSNTDENGQLENTSlrtvmelpQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEqlsd 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 718 ----------RDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGK-HSLHVSLQQAEDFMLPDT-----AEALRELVLKYR 781
Cdd:PLN02939 128 fqledlvgmiQNAEKNILLLNQARLQALEDLEKILTEKEALQGKiNILEMRLSETDARIKLAAqekihVEILEEQLEKLR 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 782 ENIINVRTAADHVEEKLKAEILFLKEqiqaeqclkENLeeTLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREK 861
Cdd:PLN02939 208 NELLIRGATEGLCVHSLSKELDVLKE---------ENM--LLKDDIQFLKAELIEVAETEERVFKLEKERSLLDASLREL 276
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1777529483 862 SQQLESLQEMKITLEEQLKKETAAKVTVEQLMFEE-KNKAQRLQTELDVSEQVQRDFVKLSQTLQ 925
Cdd:PLN02939 277 ESKFIVAQEDVSKLSPLQYDCWWEKVENLQDLLDRaTNQVEKAALVLDQNQDLRDKVDKLEASLK 341
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
645-941 |
1.22e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 43.04 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 645 QEAETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKQSTEDSSHQISALVLRAQASEILLEELQQAFSQAKRDVQEQM 724
Cdd:pfam02463 177 KLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESS 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 725 AVLMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQQAEDfmlpdtAEALRELVLKYRENIINVRTAADHVEEKLKAEILF 804
Cdd:pfam02463 257 KQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEE------EELKSELLKLERRKVDDEEKLKESEKEKKKAEKEL 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 805 LKEQIQAEQCLKENLEETLQLEIENCKEEIASISSLKAELERIKVEKGQLESTLREKSQQLESLQEMKITLEEQLKKETA 884
Cdd:pfam02463 331 KKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLL 410
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1777529483 885 AKVTVEQLMF--EEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIR 941
Cdd:pfam02463 411 LELARQLEDLlkEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKK 469
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
111-311 |
1.29e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.80 E-value: 1.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 111 QQRVAELEKINAEFLRAQQQLEQEFNQkrakfkelylakEEDLKRQNAVLQAAQDDlgqlrtqlwEARAEMENIKAIATV 190
Cdd:pfam17380 442 EERAREMERVRLEEQERQQQVERLRQQ------------EEERKRKKLELEKEKRD---------RKRAEEQRRKILEKE 500
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 191 SENTKQEAIDEV-KRQWREEvaslqavmketvrdyehqfhlrlEQERTQWAQYRESAEREIADLRRRLSEGQEEENLENE 269
Cdd:pfam17380 501 LEERKQAMIEEErKRKLLEK-----------------------EMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQ 557
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1777529483 270 MKKAQEDaeklRSVVMPMEKEIAALKdKLTEAEDKIKELEAS 311
Cdd:pfam17380 558 MRKATEE----RSRLEAMEREREMMR-QIVESEKARAEYEAT 594
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
639-957 |
1.29e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 42.74 E-value: 1.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 639 LQGIQIQEAETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKQSTEdsshqisalvLRAQASE-ILLEELQQAFSQAK 717
Cdd:PRK03918 240 IEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKE----------LKEKAEEyIKLSEFYEEYLDEL 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 718 RDVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLHVSLQqaedfmlpDTAEALRELVLKYREniinvrtaadhvEEK 797
Cdd:PRK03918 310 REIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELE--------KRLEELEERHELYEE------------AKA 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 798 LKAEILFLKEQIQAEQclKENLEETLQlEIENCKEEIasisslKAELERIKVEKGQLESTLREKSQQLESLQEMKIT--- 874
Cdd:PRK03918 370 KKEELERLKKRLTGLT--PEKLEKELE-ELEKAKEEI------EEEISKITARIGELKKEIKELKKAIEELKKAKGKcpv 440
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 875 ----LEEQLKKETAAKVTVEQlmfeeKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILNDTKLT 950
Cdd:PRK03918 441 cgreLTEEHRKELLEEYTAEL-----KRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKY 515
|
....*..
gi 1777529483 951 DINQLPE 957
Cdd:PRK03918 516 NLEELEK 522
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
182-323 |
1.36e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.54 E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 182 ENIKAIATVSENTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHlRLEQertqwaqYRESAEREIADLRRRLSEGQ 261
Cdd:COG2433 376 LSIEEALEELIEKELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVE-RLEA-------EVEELEAELEEKDERIERLE 447
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1777529483 262 EEenLENEMKKAQEDAEKLRSVVMpMEKEIAALKDKLTEAEDKIKELEaSKVKELNHYLEAE 323
Cdd:COG2433 448 RE--LSEARSEERREIRKDREISR-LDREIERLERELEEERERIEELK-RKLERLKELWKLE 505
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
109-321 |
1.36e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.59 E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 109 SLQQRVAELEKINAEFLRAQQQLEqefnQKRAKFKELYLAKEEdLKRQNAVLQAAQDDLGQLRTQLWEARAEMENIKAIA 188
Cdd:COG4913 672 ELEAELERLDASSDDLAALEEQLE----ELEAELEELEEELDE-LKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLE 746
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 189 TVSENTK---QEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLR--RRLSEGQEE 263
Cdd:COG4913 747 LRALLEErfaAALGDAVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPeyLALLDRLEE 826
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1777529483 264 ENL---ENEMKKAQEDAeklrsvvmpMEKEIAALKDKLTEAEDKIKEleasKVKELNHYLE 321
Cdd:COG4913 827 DGLpeyEERFKELLNEN---------SIEFVADLLSKLRRAIREIKE----RIDPLNDSLK 874
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
197-373 |
1.37e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.59 E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 197 EAIDEVKRQWREEVASLQAV--MKETVRDYEHQFHLRL-EQERTQWAQYRESAEREIADLRRRLSEGQEE-ENLENEMKK 272
Cdd:COG4913 255 EPIRELAERYAAARERLAELeyLRAALRLWFAQRRLELlEAELEELRAELARLEAELERLEARLDALREElDELEAQIRG 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 273 AQEDAEKlrsvvmPMEKEIAALKDKLTEAEDKIKELEAsKVKELNHYLEAEkscRTDLEMYVAVLNTQKSVLQEDAEKLR 352
Cdd:COG4913 335 NGGDRLE------QLEREIERLERELEERERRRARLEA-LLAALGLPLPAS---AEEFAALRAEAAALLEALEEELEALE 404
|
170 180
....*....|....*....|.
gi 1777529483 353 KELHEVCHLLEQERQQHNQLK 373
Cdd:COG4913 405 EALAEAEAALRDLRRELRELE 425
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
110-281 |
1.47e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.45 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 110 LQQRVAELEKINAEFLRAQ---QQLEQEFNQKRAKFKELY-----LAKEEDLKRQNAVLQAAQDDLGQLRTQLWEARAEM 181
Cdd:COG4717 76 LEEELKEAEEKEEEYAELQeelEELEEELEELEAELEELReelekLEKLLQLLPLYQELEALEAELAELPERLEELEERL 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 182 ENIKaiatvsenTKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHlRLEQERTQWAQYRESAEREIADLRRRLSEGQ 261
Cdd:COG4717 156 EELR--------ELEEELEELEAELAELQEELEELLEQLSLATEEELQ-DLAEELEELQQRLAELEEELEEAQEELEELE 226
|
170 180
....*....|....*....|
gi 1777529483 262 EEENLENEMKKAQEDAEKLR 281
Cdd:COG4717 227 EELEQLENELEAAALEERLK 246
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
647-945 |
1.57e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 42.36 E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 647 AETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKQSTEDSSHQISALVLRAQASEILLEELQQAFSQAKRdVQEQMAV 726
Cdd:TIGR02169 180 EEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEE-ELEKLTE 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 727 LMQSREQVSEELVRLqkdndslqgkhslhvsLQQAEDFMLPDTAEALRELVLKYRENIINVRTAADHVEEKLKAEilflk 806
Cdd:TIGR02169 259 EISELEKRLEEIEQL----------------LEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKEREL----- 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 807 EQIQAEQCLKENLEETLQLEIENckeeiasissLKAELERIKVEKGQLESTLREKSQQLESLQEmkiTLEEqlkKETAAK 886
Cdd:TIGR02169 318 EDAEERLAKLEAEIDKLLAEIEE----------LEREIEEERKRRDKLTEEYAELKEELEDLRA---ELEE---VDKEFA 381
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1777529483 887 VTVEQLMfEEKNKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQAdsLERIRAILN 945
Cdd:TIGR02169 382 ETRDELK-DYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAA--IAGIEAKIN 437
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
719-942 |
1.67e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 1.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 719 DVQEQMAVLMQSREQVSEELVRLQKDNDSLQGKHSLhvslqqaedfmLPDTAEALRELvLKYRENIINVRTAADHVEEkl 798
Cdd:COG4913 607 DNRAKLAALEAELAELEEELAEAEERLEALEAELDA-----------LQERREALQRL-AEYSWDEIDVASAEREIAE-- 672
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 799 kaeilfLKEQIqaEQCLKENLE-ETLQLEIENCKEEIAsisSLKAELERIKVEKGQLESTLREKSQQLESLQemkitleE 877
Cdd:COG4913 673 ------LEAEL--ERLDASSDDlAALEEQLEELEAELE---ELEEELDELKGEIGRLEKELEQAEEELDELQ-------D 734
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1777529483 878 QLKKETAAKVTVEQLMFEEKNKAQRLQtelDVSEQVQRDFVKLSQTLQVQLERIRQAdsLERIRA 942
Cdd:COG4913 735 RLEAAEDLARLELRALLEERFAAALGD---AVERELRENLEERIDALRARLNRAEEE--LERAMR 794
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
131-439 |
1.90e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 42.33 E-value: 1.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 131 LEQEFNQKRAKFKELylakEEDLKRQNAVLQAAQDDLG---QLRTQLWEARAEMENIKAIATVSENTKQEAIDEVKRQwR 207
Cdd:PRK02224 211 LESELAELDEEIERY----EEQREQARETRDEADEVLEeheERREELETLEAEIEDLRETIAETEREREELAEEVRDL-R 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 208 EEVASLQAVMKETVRD--YEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVV 284
Cdd:PRK02224 286 ERLEELEEERDDLLAEagLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEaESLREDADDLEERAEELREEA 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 285 MPMEKEIAALKDKLTEAEDKIKELEaskvKELnhyleaekscrTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVchlleq 364
Cdd:PRK02224 366 AELESELEEAREAVEDRREEIEELE----EEI-----------EELRERFGDAPVDLGNAEDFLEELREERDEL------ 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 365 eRQQHNQLKHTWQKANDQFLESQRLLM--------RDMQRMEIVLTSEQLR-QVEELKK-----KDQEEDEQQRLNKRKD 430
Cdd:PRK02224 425 -REREAELEATLRTARERVEEAEALLEagkcpecgQPVEGSPHVETIEEDReRVEELEAeledlEEEVEEVEERLERAED 503
|
....*....
gi 1777529483 431 PKKTDAEEE 439
Cdd:PRK02224 504 LVEAEDRIE 512
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
272-473 |
2.67e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.81 E-value: 2.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 272 KAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIK-------------ELEASKVKELNHYLEAEKSCRTDLEMYVAVLN 338
Cdd:PLN02939 153 QALEDLEKILTEKEALQGKINILEMRLSETDARIKlaaqekihveileEQLEKLRNELLIRGATEGLCVHSLSKELDVLK 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 339 TQKSVLQEDAEKLRKELHEVCH------LLEQERqqhNQLKHTWQKANDQFLESQrllmRDMQRMEIVLTSEQLRQVEEL 412
Cdd:PLN02939 233 EENMLLKDDIQFLKAELIEVAEteervfKLEKER---SLLDASLRELESKFIVAQ----EDVSKLSPLQYDCWWEKVENL 305
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1777529483 413 -----KKKDQEEDEQQRLNKRKD-PKKTDAEE----EVKIPVVCALTHEEPSAQLSNEEEHLDSTHGSVHS 473
Cdd:PLN02939 306 qdlldRATNQVEKAALVLDQNQDlRDKVDKLEaslkEANVSKFSSYKVELLQQKLKLLEERLQASDHEIHS 376
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
247-368 |
2.70e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.68 E-value: 2.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 247 EREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELE-----ASKVKE---LN 317
Cdd:COG1579 16 DSELDRLEHRLKELPAElAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEeqlgnVRNNKEyeaLQ 95
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1777529483 318 HYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEVCHLLEQERQQ 368
Cdd:COG1579 96 KEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAE 146
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
110-283 |
2.78e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 41.58 E-value: 2.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 110 LQQRVAELEKINAEFLRAQQQLEQEFNQKRAKFKELYLAKEEdlkrQNAVLQAAQDDLGQLRTQLWEARAEMENIKAiat 189
Cdd:TIGR02168 335 LAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEE----LEEQLETLRSKVAQLELQIASLNNEIERLEA--- 407
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 190 vsentKQEAIDEVKRQWREEVASLQAVMKETVRDYEHQFHLRLEQERTQWAQYRESAEREIADLRRRLSEGQEEEN-LEN 268
Cdd:TIGR02168 408 -----RLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDaAER 482
|
170
....*....|....*
gi 1777529483 269 EMKKAQEDAEKLRSV 283
Cdd:TIGR02168 483 ELAQLQARLDSLERL 497
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
109-319 |
3.05e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.15 E-value: 3.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 109 SLQQRVAELEKiNAEFLRAQQqlEQEFNQKRAKFKELyLAKEEDLKRQNAVLQAA-----------QDDLGQLRTQLWEA 177
Cdd:PHA02562 192 HIQQQIKTYNK-NIEEQRKKN--GENIARKQNKYDEL-VEEAKTIKAEIEELTDEllnlvmdiedpSAALNKLNTAAAKI 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 178 RAEMENIKAIA------TVSENTKQEAIDEVKRqwreeVASLQAVMKETVRDYEhQFHLRLEQERTQWAQYREsAEREIA 251
Cdd:PHA02562 268 KSKIEQFQKVIkmyekgGVCPTCTQQISEGPDR-----ITKIKDKLKELQHSLE-KLDTAIDELEEIMDEFNE-QSKKLL 340
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1777529483 252 DLRRRLS-EGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLteaeDKIKELEASKVKELNHY 319
Cdd:PHA02562 341 ELKNKIStNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDEL----DKIVKTKSELVKEKYHR 405
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
264-549 |
3.95e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 41.19 E-value: 3.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 264 ENLENEMKKAQEDAEKLRSvvmpmeKEIAAL-KDKLTEAEDKIKELEASKVKELNHYLEAEKSCRTDlemyvaVLNTQKS 342
Cdd:PTZ00108 1105 EKLNAELEKKEKELEKLKN------TTPKDMwLEDLDKFEEALEEQEEVEEKEIAKEQRLKSKTKGK------ASKLRKP 1172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 343 VLQEDAEKLR-KELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQRMEIVLTSEQLRQVEELKKKDQEEDE 421
Cdd:PTZ00108 1173 KLKKKEKKKKkSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKKSSVKRLKSKKNNSSK 1252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 422 QQRLNKRKDPKKTDAEEEVKIPV----VCALTHEEPSAQLSNEEEHLDSTHGSVHSLDADLLLPSGDPFSKSdNDMFKDG 497
Cdd:PTZ00108 1253 SSEDNDEFSSDDLSKEGKPKNAPkrvsAVQYSPPPPSKRPDGESNGGSKPSSPTKKKVKKRLEGSLAALKKK-KKSEKKT 1331
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1777529483 498 LRRAQSTDSLGTSGSLQSKALGYNCKAKSAGNLDESDFGPLVGADSVSENFD 549
Cdd:PTZ00108 1332 ARKKKSKTRVKQASASQSSRLLRRPRKKKSDSSSEDDDDSEVDDSEDEDDED 1383
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
109-302 |
5.11e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 40.82 E-value: 5.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 109 SLQQRVAELEKINAEFLRAQQQLEQEfnqkRAKFKELYLAKEEDLKRQNAVLQAAQDDLGQLRTQLWEARAEMENIKAia 188
Cdd:TIGR02169 298 ELEAEIASLERSIAEKERELEDAEER----LAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRA-- 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 189 tvsentKQEAIDEVKRQWREEVASLQAVMKETVRD-YEHQFHL-RLEQERTQWAQYRESAEREIADLRRRLSEGQEE--- 263
Cdd:TIGR02169 372 ------ELEEVDKEFAETRDELKDYREKLEKLKREiNELKRELdRLQEELQRLSEELADLNAAIAGIEAKINELEEEked 445
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1777529483 264 ------------ENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAE 302
Cdd:TIGR02169 446 kaleikkqewklEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAE 496
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
636-824 |
5.48e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.13 E-value: 5.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 636 EKQLQGIQIQEAETRDQVKKLQVMLRQANDQLEKTMKDKQELEDFIKQSTEDSSHQISALVLRAQASEILLEELQQAFSQ 715
Cdd:COG4942 54 LKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLD 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 716 AKRDVQeQMAVLMQSREQVSEELVRLQKDNDSLQgkhslhVSLQQAEdfmlpDTAEALRELVLKYRENIINVRTAADHVE 795
Cdd:COG4942 134 AVRRLQ-YLKYLAPARREQAEELRADLAELAALR------AELEAER-----AELEALLAELEEERAALEALKAERQKLL 201
|
170 180
....*....|....*....|....*....
gi 1777529483 796 EKLKAEILFLKEQIQAEQCLKENLEETLQ 824
Cdd:COG4942 202 ARLEKELAELAAELAELQQEAEELEALIA 230
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
240-430 |
7.49e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.28 E-value: 7.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 240 AQYRESAEREIADLRRRLSEGQEE-ENLENEMKKAQEDAEKLRSVVMP--MEKEIAALKDKLTEAEDKIKELEASkvkel 316
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERlEALEAELDALQERREALQRLAEYswDEIDVASAEREIAELEAELERLDAS----- 683
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1777529483 317 NHYLEAekscrtdlemyvavlntqksvLQEDAEKLRKELHEVCHLLEQERQQHNQLKHTWQKANDQFLESQRLLMRDMQR 396
Cdd:COG4913 684 SDDLAA---------------------LEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDL 742
|
170 180 190
....*....|....*....|....*....|....
gi 1777529483 397 MEIVLTSEQLRQVEELKKKDQEEDEQQRLNKRKD 430
Cdd:COG4913 743 ARLELRALLEERFAAALGDAVERELRENLEERID 776
|
|
| |
