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Conserved domains on  [gi|1524868420|ref|XP_027041470|]
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dnaJ homolog subfamily B member 6-like isoform X1 [Pocillopora damicornis]

Protein Classification

J domain-containing protein( domain architecture ID 1001220)

J domain-containing protein similar to molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  1.10.287.110
Gene Ontology:  GO:0006457
PubMed:  9644977|8016869|15170475
SCOP:  4000605

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DnaJ_bact super family cl37091
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-132 2.21e-39

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


The actual alignment was detected with superfamily member TIGR02349:

Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 138.89  E-value: 2.21e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   4 YYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDnkEEAEEKFKLISEAYDVLSDKEKRKTYDK--HgkeglAGGGGGGR 81
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQfgH-----AGFNGGGG 74

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1524868420  82 PSGGGFSDFHTFHFRDPDEIFRDFfrndsfiFEEFFGRNRSRNQNRMRPRD 132
Cdd:TIGR02349  75 GGGGGFNGFDIGFFGDFGDIFGDF-------FGGGGGSGRRRRSGPRRGED 118
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-132 2.21e-39

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 138.89  E-value: 2.21e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   4 YYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDnkEEAEEKFKLISEAYDVLSDKEKRKTYDK--HgkeglAGGGGGGR 81
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQfgH-----AGFNGGGG 74

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1524868420  82 PSGGGFSDFHTFHFRDPDEIFRDFfrndsfiFEEFFGRNRSRNQNRMRPRD 132
Cdd:TIGR02349  75 GGGGGFNGFDIGFFGDFGDIFGDF-------FGGGGGSGRRRRSGPRRGED 118
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 4-129 9.40e-38

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 134.89  E-value: 9.40e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   4 YYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKeEAEEKFKLISEAYDVLSDKEKRKTYDK--HgkeglagGGGGGR 81
Cdd:PRK10767    6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQygH-------AAFEQG 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1524868420  82 PSGGGFSDFHTFHfrdpdEIFRDffrndsfIFEEFFGRNRSRNQNRMR 129
Cdd:PRK10767   78 GGGGGFGGGGGFG-----DIFGD-------IFGDIFGGGRGGGRQRAR 113
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 6.52e-36

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 121.04  E-value: 6.52e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKeEAEEKFKLISEAYDVLSDKEKRKTYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 4-66 1.86e-34

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 120.19  E-value: 1.86e-34
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1524868420   4 YYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKeEAEEKFKLISEAYDVLSDKEKRKTYD 66
Cdd:COG0484     2 YYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYD 63
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 5.79e-32

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 111.17  E-value: 5.79e-32
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420    2 TEYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKEEAEEKFKLISEAYDVLSDKEK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 3.04e-28

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 101.47  E-value: 3.04e-28
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNkEEAEEKFKLISEAYDVLSD 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-68 6.16e-22

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 92.96  E-value: 6.16e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNpdNKEEAEEKFKLISEAYDVLSDKEKRKTYDKH 68
Cdd:NF037946    6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKY 69
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-132 2.21e-39

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 138.89  E-value: 2.21e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   4 YYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDnkEEAEEKFKLISEAYDVLSDKEKRKTYDK--HgkeglAGGGGGGR 81
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQfgH-----AGFNGGGG 74

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1524868420  82 PSGGGFSDFHTFHFRDPDEIFRDFfrndsfiFEEFFGRNRSRNQNRMRPRD 132
Cdd:TIGR02349  75 GGGGGFNGFDIGFFGDFGDIFGDF-------FGGGGGSGRRRRSGPRRGED 118
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 4-129 9.40e-38

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 134.89  E-value: 9.40e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   4 YYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKeEAEEKFKLISEAYDVLSDKEKRKTYDK--HgkeglagGGGGGR 81
Cdd:PRK10767    6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQygH-------AAFEQG 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1524868420  82 PSGGGFSDFHTFHfrdpdEIFRDffrndsfIFEEFFGRNRSRNQNRMR 129
Cdd:PRK10767   78 GGGGGFGGGGGFG-----DIFGD-------IFGDIFGGGRGGGRQRAR 113
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 6.52e-36

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 121.04  E-value: 6.52e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKeEAEEKFKLISEAYDVLSDKEKRKTYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 4-66 1.86e-34

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 120.19  E-value: 1.86e-34
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1524868420   4 YYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKeEAEEKFKLISEAYDVLSDKEKRKTYD 66
Cdd:COG0484     2 YYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYD 63
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 3-136 1.46e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 124.11  E-value: 1.46e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDnkEEAEEKFKLISEAYDVLSDKEKRKTYDKHgkegLAGGGGGGRP 82
Cdd:PRK14291    4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQF----GHAAFSGSGQ 77

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1524868420  83 SGGGFSDFHTFHFRDPDEIFRDFFRNdsFIFEEFFGRNRSRNQNRMRPRDPFAG 136
Cdd:PRK14291   78 QQQGQEGFSDFGGGNIEDILEDVFDI--FGFGDIFGRRRATRERRKTYQRPVKG 129
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 3-131 4.09e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 122.59  E-value: 4.09e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKEEAEEKFKLISEAYDVLSDKEKRKTYDKHGKEGLAGGGGGGRP 82
Cdd:PRK14282    5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQETES 84

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1524868420  83 SGGGFSDFhtfhFRDpdeiFRDFFRNDsfIFEEFFGRNRSRNQNRMRPR 131
Cdd:PRK14282   85 GGGFFEDI----FKD----FENIFNRD--IFDIFFGERRTQEEQREYAR 123
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 5.79e-32

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 111.17  E-value: 5.79e-32
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420    2 TEYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKEEAEEKFKLISEAYDVLSDKEK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 4-131 6.01e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 114.09  E-value: 6.01e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   4 YYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKeEAEEKFKLISEAYDVLSDKEKRKTYDKHgkeglagggGGGRPS 83
Cdd:PRK14294    6 YYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDK-EAEELFKEAAEAYEVLSDPKKRGIYDQY---------GHEGLS 75

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1524868420  84 GGGFSDFHTFhfrdpDEIFRDFfrNDsfIFEEFFGRNRS-RNQNRMRPR 131
Cdd:PRK14294   76 GTGFSGFSGF-----DDIFSSF--GD--IFEDFFGFGGGrRGRSRTAVR 115
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 3.04e-28

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 101.47  E-value: 3.04e-28
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNkEEAEEKFKLISEAYDVLSD 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-66 6.02e-28

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 101.72  E-value: 6.02e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1524868420   1 MTEYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKEEAEEKFKLISEAYDVLSDKEKRKTYD 66
Cdd:COG2214     4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYD 69
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 3-131 2.07e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 107.63  E-value: 2.07e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDnkEEAEEKFKLISEAYDVLSDKEKRKTYDKhgkeglaggggggrp 82
Cdd:PRK14298    6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDR--------------- 68

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1524868420  83 sgggfsdfhtFHFRDPDEIF--RDFFRNDSF-----IFEEFFGRNRSRnqNRMRPR 131
Cdd:PRK14298   69 ----------FGHAGIDNQYsaEDIFRGADFggfgdIFEMFFGGGGRR--GRMGPR 112
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 3-124 2.15e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 107.32  E-value: 2.15e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKEEAEEKFKLISEAYDVLSDKEKRKTYDKhgkegLAGGGGGGRP 82
Cdd:PRK14290    4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQ-----TGTVDFGAGG 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1524868420  83 SGGGFSDFHtfHFRDPDEIFRDFFRND--SFIFEEFFGRNRSRN 124
Cdd:PRK14290   79 SNFNWDNFT--HFSDINDIFNQIFGGNfgSDFFSGFGNQQSTRN 120
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 3-67 2.32e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 107.59  E-value: 2.32e-27
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKeEAEEKFKLISEAYDVLSDKEKRKTYDK 67
Cdd:PRK14281    4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNK-EAEEHFKEVNEAYEVLSNDDKRRRYDQ 67
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 3-123 3.33e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 107.19  E-value: 3.33e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKeEAEEKFKLISEAYDVLSDKEKRKTYDK--HGKEGLAGGGGGG 80
Cdd:PRK14277    6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDK-EAEQKFKEINEAYEILSDPQKRAQYDQfgHAAFDPGGFGQGG 84

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1524868420  81 RPSGGGFSDFHTFHFRDPDEIFRDFfrndsfiFEEFFGRNRSR 123
Cdd:PRK14277   85 FGQGGFGGGGFDFDFGGFGDIFEDI-------FGDFFGTGRRR 120
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 3-131 6.14e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 105.98  E-value: 6.14e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNkEEAEEKFKLISEAYDVLSDKEKRKTYDK--HGKEGLAGGGGgg 80
Cdd:PRK14301    5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN-PEAEQKFKEAAEAYEVLRDAEKRARYDRfgHAGVNGNGGFG-- 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1524868420  81 rpsgggfsdfhtfHFRDPDEIFRDFfrndSFIFEEFFGRNRSRNQNRMRPR 131
Cdd:PRK14301   82 -------------GFSSAEDIFSHF----SDIFGDLFGFSGGGSRRGPRPQ 115
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 3-63 1.52e-26

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 96.99  E-value: 1.52e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKeEAEEKFKLISEAYDVLSDKEKRK 63
Cdd:COG5407     1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDP-KAEERFKEINEAYELLSDAEKRA 60
PRK14295 PRK14295
molecular chaperone DnaJ;
3-66 1.16e-25

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 103.00  E-value: 1.16e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKeEAEEKFKLISEAYDVLSDKEKRKTYD 66
Cdd:PRK14295   10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDA-KAEERFKEISEAYDVLSDEKKRKEYD 72
PRK14289 PRK14289
molecular chaperone DnaJ;
3-67 1.22e-25

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 102.99  E-value: 1.22e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKEeAEEKFKLISEAYDVLSDKEKRKTYDK 67
Cdd:PRK14289    6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKE-AEEKFKEAAEAYDVLSDPDKRSRYDQ 69
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 2-66 1.99e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 102.05  E-value: 1.99e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1524868420   2 TEYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDnkEEAEEKFKLISEAYDVLSDKEKRKTYD 66
Cdd:PRK14278    3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVD 65
PRK14297 PRK14297
molecular chaperone DnaJ;
3-124 2.83e-25

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 101.78  E-value: 2.83e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKeEAEEKFKLISEAYDVLSDKEKRKTYDKHgkeglaGGGGGGRP 82
Cdd:PRK14297    5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNK-EAEEKFKEINEAYQVLSDPQKKAQYDQF------GTADFNGA 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1524868420  83 SGGGFSDFHTFHFRDPDEiFRDFFrnDSFIFEEFFGRNRSRN 124
Cdd:PRK14297   78 GGFGSGGFGGFDFSDMGG-FGDIF--DSFFGGGFGSSSRRRN 116
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 2-132 5.22e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 100.93  E-value: 5.22e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   2 TEYYDILEVPKSASEQEIKKAYRKLALKWHPDKNpdnKEE-AEEKFKLISEAYDVLSDKEKRKTYDKHGKEGLAGGGGGG 80
Cdd:PRK14276    4 TEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDIN---KEPgAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGG 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1524868420  81 RPSGGGFSDFHTFHfrDPDEIFRDFFRndsfifeeffGRNRSRNQNRMRPRD 132
Cdd:PRK14276   81 AGGFGGFDGSGGFG--GFEDIFSSFFG----------GGGARRNPNAPRQGD 120
PRK14279 PRK14279
molecular chaperone DnaJ;
3-66 8.64e-25

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 100.58  E-value: 8.64e-25
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKeEAEEKFKLISEAYDVLSDKEKRKTYD 66
Cdd:PRK14279   10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDP-AAEERFKAVSEAHDVLSDPAKRKEYD 72
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 4-136 9.54e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 100.06  E-value: 9.54e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   4 YYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKeEAEEKFKLISEAYDVLSDKEKRKTYDKHGKEGLAGGGgggrps 83
Cdd:PRK14286    6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNK-ESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGA------ 78

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1524868420  84 gggfSDFHTFHFRDPDEIFRDFfrndSFIFEEFFGRNRSRNQNRMRPRDPFAG 136
Cdd:PRK14286   79 ----GGFGQGAYTDFSDIFGDF----GDIFGDFFGGGRGGGSGGGRRSGPQRG 123
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 3-106 1.01e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 98.86  E-value: 1.01e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDnkEEAEEKFKLISEAYDVLSDKEKRKTYDKHGKEGLAGGGGGGRP 82
Cdd:PRK14299    5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP 82

                          90       100
                  ....*....|....*....|....
gi 1524868420  83 SGGGFSDFHTFHFRDPDEIFRDFF 106
Cdd:PRK14299   83 GPPGGGDFSGFNVGDFSDFFQQLF 106
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 2-68 1.07e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 100.30  E-value: 1.07e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1524868420   2 TEYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKeEAEEKFKLISEAYDVLSDKEKRKTYDKH 68
Cdd:PRK14284    1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA-EAEKRFKEVSEAYEVLSDAQKRESYDRY 66
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 3-67 6.46e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 97.97  E-value: 6.46e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDnkEEAEEKFKLISEAYDVLSDKEKRKTYDK 67
Cdd:PRK14283    6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQ 68
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-67 1.53e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 96.88  E-value: 1.53e-23
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1524868420   1 MTEYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDnkEEAEEKFKLISEAYDVLSDKEKRKTYDK 67
Cdd:PRK14292    1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDR 65
PRK14280 PRK14280
molecular chaperone DnaJ;
3-135 2.96e-23

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 96.33  E-value: 2.96e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNpdnKEE-AEEKFKLISEAYDVLSDKEKRKTYDKhgkeglaggggggr 81
Cdd:PRK14280    5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDIN---KEEgADEKFKEISEAYEVLSDDQKRAQYDQ-------------- 67

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1524868420  82 psgggfsdfhtFHFRDPDEIF-------RDFFRNDSF--IFEEFFGRNRSRnqnrmrpRDPFA 135
Cdd:PRK14280   68 -----------FGHAGPNQGFggggfggGDFGGGFGFedIFSSFFGGGGRR-------RDPNA 112
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-68 6.16e-22

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 92.96  E-value: 6.16e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNpdNKEEAEEKFKLISEAYDVLSDKEKRKTYDKH 68
Cdd:NF037946    6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKY 69
PRK14293 PRK14293
molecular chaperone DnaJ;
1-67 1.15e-21

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 91.59  E-value: 1.15e-21
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1524868420   1 MTEYYDILEVPKSASEQEIKKAYRKLALKWHPDKnpdNKEE-AEEKFKLISEAYDVLSDKEKRKTYDK 67
Cdd:PRK14293    2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDV---NKEPgAEDRFKEINRAYEVLSDPETRARYDQ 66
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 3-131 2.25e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 90.82  E-value: 2.25e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKeEAEEKFKLISEAYDVLSDKEKRKTYDK--HGKEGLAGGGGGG 80
Cdd:PRK14285    4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNK-EAESIFKEATEAYEVLIDDNKRAQYDRfgHTAFEGGGGFEGF 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1524868420  81 RPSGGGFSDfhtfhfrdpdeIFRDFfrndSFIFEEFFGRNRSRNQNRMRPR 131
Cdd:PRK14285   83 SGGFSGFSD-----------IFEDF----GDIFDSFFTGNRGQDKNRKHEK 118
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 3-68 5.43e-20

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 87.57  E-value: 5.43e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDnkeeaEEKFKLISEAYDVLSDKEKRKTYDKH 68
Cdd:PTZ00037   29 KLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRKIYDEY 89
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 3-132 2.20e-19

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 85.38  E-value: 2.20e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNpdNKEEAEEKFKLISEAYDVLSDKEKRKTYDKHgkegLAGGGGGGRP 82
Cdd:PRK14296    5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLN--KSPDAHDKMVEINEAADVLLDKDKRKQYDQF----GHAAFDGSSG 78

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1524868420  83 SGGGFSDFHTFHFRDPDEIFRDFfrndSFIFEEFFGRNRSRNQNRMRPRD 132
Cdd:PRK14296   79 FSSNFGDFEDLFSNMGSSGFSSF----TNIFSDFFGSNKSDYQRSTKGQS 124
PRK14288 PRK14288
molecular chaperone DnaJ;
4-106 1.82e-18

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 82.81  E-value: 1.82e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   4 YYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNKeEAEEKFKLISEAYDVLSDKEKRKTYDKHgkegLAGGGGGGRPS 83
Cdd:PRK14288    5 YYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK-EAEEKFKLINEAYGVLSDEKKRALYDRY----GKKGLNQAGAS 79

                          90       100
                  ....*....|....*....|...
gi 1524868420  84 GGGFSDFhtfhFRDPDEIFRDFF 106
Cdd:PRK14288   80 QSDFSDF----FEDLGSFFEDAF 98
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 3-131 4.13e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 78.90  E-value: 4.13e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNpdNKEEAEEKFKLISEAYDVLSDKEKRKTYDKHGKEGLAGGGGGGRP 82
Cdd:PRK14300    4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTT--DAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGG 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1524868420  83 SGGgfSDFHTfhfrDPDEIFRDFfrndsfiFEEFFGRNRSRNQNRMRPR 131
Cdd:PRK14300   82 GNH--GGFHP----DINDIFGDF-------FSDFMGGSRRSRPTSSKVR 117
PRK10266 PRK10266
curved DNA-binding protein;
3-132 5.69e-17

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 77.94  E-value: 5.69e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPD--KNPDnkeeAEEKFKLISEAYDVLSDKEKRKTYDKhgkeGLAGGGGGG 80
Cdd:PRK10266    5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEPD----AEARFKEVAEAWEVLSDEQRRAEYDQ----LWQHRNDPQ 76

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1524868420  81 RPSGGGFSDFHTFHFRDPDEIFRDFFRNdsfifeefFGRNRSRNQnRMRPRD 132
Cdd:PRK10266   77 FNRQFQHGDGQSFNAEDFDDIFSSIFGQ--------HARQSRQRP-AARGHD 119
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 3-67 2.87e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 76.59  E-value: 2.87e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1524868420   3 EYYDILEVPKSASEQEIKKAYRKLALKWHPDKNpdNKEEAEEKFKLISEAYDVLSDKEKRKTYDK 67
Cdd:PRK14287    5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVN--KAPDAEDKFKEVKEAYDTLSDPQKKAHYDQ 67
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-58 1.83e-14

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 65.97  E-value: 1.83e-14
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1524868420   1 MTEYYDILEVPKSASEQEIKKAYRKLALKWHPDK-----NPDNKEEAEEKFKLISEAYDVLSD 58
Cdd:COG1076     3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLALQKAAAINEAYETLKD 65
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 2-68 2.66e-09

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 56.72  E-value: 2.66e-09
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1524868420    2 TEYYDILEVPKSASEQEIKKAYRKLALKWHPDKNPDNkeEAEEKFKLISEAYDVLSDKEKRKTYDKH 68
Cdd:PTZ00341   573 TLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKF 637
djlA PRK09430
co-chaperone DjlA;
5-63 8.16e-09

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 54.43  E-value: 8.16e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1524868420   5 YDILEVPKSASEQEIKKAYRKLALKWHPDK------NPDNKEEAEEKFKLISEAYDVLsdKEKRK 63
Cdd:PRK09430  203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvakglPPEMMEMAKEKAQEIQAAYELI--KKQKG 265
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 14-66 2.38e-05

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 44.64  E-value: 2.38e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1524868420  14 ASEQEIKKAYRKLALKWHPDKNPDNKE-EAEEKFKLISEAYDVLSDKEKRKTYD 66
Cdd:COG5269    58 AIPPQILKAHKKKVYKYHPDKTAAGGNkGCDEFFKLIQKAREVLGDRKLRLQYD 111
PHA03102 PHA03102
Small T antigen; Reviewed
 6-62 3.22e-04

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 39.65  E-value: 3.22e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1524868420   6 DILEVPKSA--SEQEIKKAYRKLALKWHPDKNPDnkeeaEEKFKLISEAYDVLSDKEKR 62
Cdd:PHA03102    9 DLLGLPRSAwgNLPLMRKAYLRKCLEFHPDKGGD-----EEKMKELNTLYKKFRESVKS 62
PTZ00100 PTZ00100
DnaJ chaperone protein; Provisional
 2-33 1.46e-03

DnaJ chaperone protein; Provisional


Pssm-ID: 240265  Cd Length: 116  Bit Score: 37.14  E-value: 1.46e-03
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1524868420   2 TEYYDILEVPKSASEQEIKKAYRKLALKWHPD 33
Cdd:PTZ00100   65 SEAYKILNISPTASKERIREAHKQLMLRNHPD 96
PHA02624 PHA02624
large T antigen; Provisional
 6-58 3.44e-03

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 38.04  E-value: 3.44e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1524868420   6 DILEVPKSA--SEQEIKKAYRKLALKWHPDKNPDnkeeaEEKFKLISEAYDVLSD 58
Cdd:PHA02624   15 DLLGLPMAAwgNLPLMRKAYLRKCKEYHPDKGGD-----EEKMKRLNSLYKKLQE 64
hscB PRK01356
co-chaperone HscB; Provisional
 1-65 8.12e-03

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 36.01  E-value: 8.12e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1524868420   1 MTEYYDILEVPK--SASEQEIKKAYRKLALKWHPDKnPDNKEEAEEKFKLISE---AYDVLSDKEKRKTY 65
Cdd:PRK01356    1 MQNYFQLLGLPQeyNIDLKILEKQYFAMQVKYHPDK-AKTLQEKEQNLIIASElnnAYSTLKDALKRAEY 69
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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