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Conserved domains on  [gi|1448252971|ref|XP_025983001|]
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WAT1-related protein At1g21890 [Glycine max]

Protein Classification

DMT family transporter( domain architecture ID 706274)

DMT (drug/metabolite transporter) family transporter is an inner membrane protein involved in the transport of one or more of a variety of substrates such as amino acids, drugs, metabolites, and sugar phosphates, among others; similar to Arabidopsis thaliana protein WALLS ARE THIN 1 (WAT1) and WAT1-related proteins

Gene Ontology:  GO:0016020|GO:0022857
PubMed:  11432728
TCDB:  2.A.7

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PLN00411 super family cl28283
nodulin MtN21 family protein; Provisional
 11-119 1.87e-05

nodulin MtN21 family protein; Provisional


The actual alignment was detected with superfamily member PLN00411:

Pssm-ID: 177805 [Multi-domain]  Cd Length: 358  Bit Score: 42.25  E-value: 1.87e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1448252971  11 LVAVQFGSAGMFIFAMDSIKKGMSHYVFIVYRNAIASVSLAPFAFVLER-KVRPKMTFRVFLEIMALAFFEIMLdQCIAL 89
Cdd:PLN00411   18 MLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRsRSLPPLSVSILSKIGLLGFLGSMY-VITGY 96

                          90       100       110
                  ....*....|....*....|....*....|
gi 1448252971  90 LGMKFTSASFLSAVMNSAHSVTFVMAVILR 119
Cdd:PLN00411   97 IGIEYSNPTLASAISNITPALTFILAIIFR 126
 
Name Accession Description Interval E-value
PLN00411 PLN00411
nodulin MtN21 family protein; Provisional
 11-119 1.87e-05

nodulin MtN21 family protein; Provisional


Pssm-ID: 177805 [Multi-domain]  Cd Length: 358  Bit Score: 42.25  E-value: 1.87e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1448252971  11 LVAVQFGSAGMFIFAMDSIKKGMSHYVFIVYRNAIASVSLAPFAFVLER-KVRPKMTFRVFLEIMALAFFEIMLdQCIAL 89
Cdd:PLN00411   18 MLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRsRSLPPLSVSILSKIGLLGFLGSMY-VITGY 96

                          90       100       110
                  ....*....|....*....|....*....|
gi 1448252971  90 LGMKFTSASFLSAVMNSAHSVTFVMAVILR 119
Cdd:PLN00411   97 IGIEYSNPTLASAISNITPALTFILAIIFR 126
 
Name Accession Description Interval E-value
PLN00411 PLN00411
nodulin MtN21 family protein; Provisional
 11-119 1.87e-05

nodulin MtN21 family protein; Provisional


Pssm-ID: 177805 [Multi-domain]  Cd Length: 358  Bit Score: 42.25  E-value: 1.87e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1448252971  11 LVAVQFGSAGMFIFAMDSIKKGMSHYVFIVYRNAIASVSLAPFAFVLER-KVRPKMTFRVFLEIMALAFFEIMLdQCIAL 89
Cdd:PLN00411   18 MLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRsRSLPPLSVSILSKIGLLGFLGSMY-VITGY 96

                          90       100       110
                  ....*....|....*....|....*....|
gi 1448252971  90 LGMKFTSASFLSAVMNSAHSVTFVMAVILR 119
Cdd:PLN00411   97 IGIEYSNPTLASAISNITPALTFILAIIFR 126
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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