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Conserved domains on  [gi|1435005827|ref|XP_025768940|]
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ATP synthase subunit O, mitochondrial [Puma concolor]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 37-209 2.99e-56

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


:

Pssm-ID: 459714  Cd Length: 172  Bit Score: 176.17  E-value: 2.99e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827  37 IEGRYATALYSAASKQNKLEQVEKELLRVAQILKE-PKMAASIMNPYVKRSVKVKSLNDMtAKERFSPLTCNLINLLAEN 115
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAEnPDLAAFLSNPTISAEEKKALLLEL-FKGLLSPLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827 116 GRLNNTPGVVSAFSTMMSVHRGEVPCTVTTASPLDEPTLAELKTVLKSFLSKGQVlKLEVKIDPSIMGGMIVRIGEKYAD 195
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKKKV-KLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 1435005827 196 MSAKTKIQKLSRAM 209
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
 
Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 37-209 2.99e-56

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 176.17  E-value: 2.99e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827  37 IEGRYATALYSAASKQNKLEQVEKELLRVAQILKE-PKMAASIMNPYVKRSVKVKSLNDMtAKERFSPLTCNLINLLAEN 115
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAEnPDLAAFLSNPTISAEEKKALLLEL-FKGLLSPLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827 116 GRLNNTPGVVSAFSTMMSVHRGEVPCTVTTASPLDEPTLAELKTVLKSFLSKGQVlKLEVKIDPSIMGGMIVRIGEKYAD 195
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKKKV-KLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 1435005827 196 MSAKTKIQKLSRAM 209
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 36-211 1.12e-45

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 149.15  E-value: 1.12e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827  36 GIEGRYATALYSAASKQNKLEQVEKELLRVAQILKE-PKMAASIMNPYVKRSVKVKSLNDMtAKERFSPLTCNLINLLAE 114
Cdd:COG0712     5 TIARRYAKALFELAKEKGALDEVEEELFALAALLAEnPELRALLSSPVISAEEKKELLEAL-FGGKLSPETLNFLKLLVE 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827 115 NGRLNNTPGVVSAFSTMMSVHRGEVPCTVTTASPLDEPTLAELKTVLKSFLskGQVLKLEVKIDPSIMGGMIVRIGEKYA 194
Cdd:COG0712    84 NGRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKT--GKKVELNVKVDPSLIGGVVVRVGDKVI 161

                         170
                  ....*....|....*..
gi 1435005827 195 DMSAKTKIQKLSRAMRE 211
Cdd:COG0712   162 DGSVRGRLNRLRRALKG 178
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 36-209 2.34e-40

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 135.68  E-value: 2.34e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827  36 GIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKMAASIMNPYVKRSVKVKSLNDmtAKERFSPLTCNLINLLAEN 115
Cdd:PRK05758    6 TVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAA--VFKSLSEYVQNFLKVLAEN 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827 116 GRLNNTPGVVSAFSTMMSVHRGEVPCTVTTASPLDEPTLAELKTVLKSFLskGQVLKLEVKIDPSIMGGMIVRIGEKYAD 195
Cdd:PRK05758   84 GRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRL--GRKVKLNEKVDPSLIGGVIIKVGDRVID 161

                         170
                  ....*....|....
gi 1435005827 196 MSAKTKIQKLSRAM 209
Cdd:PRK05758  162 GSVRGKLERLKDAL 175
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 40-209 1.36e-29

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 107.78  E-value: 1.36e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827  40 RYATALYSAASKQNKLEQVEKELLRVAQILK-EPKMAASIMNPYVKRSVKvKSLNDMTAKERFSPLTCNLINLLAENGRL 118
Cdd:TIGR01145   4 PYAKALFEIANEKSSLEEWGEMLNFVKEVLKnNKELKKFLSNPLISAEKK-KEFIKNVFGEQLDESSLNLLLLLAENGRL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827 119 NNTPGVVSAFSTMMSVHRGEVPCTVTTASPLDEPTLAELKTVLKSFLSKGQVlKLEVKIDPSIMGGMIVRIGEKYADMSA 198
Cdd:TIGR01145  83 AALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAAKV-KLNCKVDKDLIGGVIIRIGDRVIDGSV 161

                         170
                  ....*....|.
gi 1435005827 199 KTKIQKLSRAM 209
Cdd:TIGR01145 162 RGQLKRLSRQL 172
 
Name Accession Description Interval E-value
OSCP pfam00213
ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP ...
 37-209 2.99e-56

ATP synthase delta (OSCP) subunit; The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.


Pssm-ID: 459714  Cd Length: 172  Bit Score: 176.17  E-value: 2.99e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827  37 IEGRYATALYSAASKQNKLEQVEKELLRVAQILKE-PKMAASIMNPYVKRSVKVKSLNDMtAKERFSPLTCNLINLLAEN 115
Cdd:pfam00213   1 IARRYAKALFELAKEKGKLDQVEEELEALEAALAEnPDLAAFLSNPTISAEEKKALLLEL-FKGLLSPLTLNFLKLLAEN 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827 116 GRLNNTPGVVSAFSTMMSVHRGEVPCTVTTASPLDEPTLAELKTVLKSFLSKGQVlKLEVKIDPSIMGGMIVRIGEKYAD 195
Cdd:pfam00213  80 GRLGLLPEIAEEFEELLDEARGIVEAEVTSAVPLSEEQLEKLAAALEKKTGKKKV-KLENKVDPSLIGGVVVRVGDKVID 158

                         170
                  ....*....|....
gi 1435005827 196 MSAKTKIQKLSRAM 209
Cdd:pfam00213 159 GSVKGKLERLKRAL 172
AtpH COG0712
FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP ...
 36-211 1.12e-45

FoF1-type ATP synthase, delta subunit [Energy production and conversion]; FoF1-type ATP synthase, delta subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440476  Cd Length: 178  Bit Score: 149.15  E-value: 1.12e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827  36 GIEGRYATALYSAASKQNKLEQVEKELLRVAQILKE-PKMAASIMNPYVKRSVKVKSLNDMtAKERFSPLTCNLINLLAE 114
Cdd:COG0712     5 TIARRYAKALFELAKEKGALDEVEEELFALAALLAEnPELRALLSSPVISAEEKKELLEAL-FGGKLSPETLNFLKLLVE 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827 115 NGRLNNTPGVVSAFSTMMSVHRGEVPCTVTTASPLDEPTLAELKTVLKSFLskGQVLKLEVKIDPSIMGGMIVRIGEKYA 194
Cdd:COG0712    84 NGRLALLPEIAEEFEELAAERRGIVVAEVTSAVPLSEEQLERLAAALEKKT--GKKVELNVKVDPSLIGGVVVRVGDKVI 161

                         170
                  ....*....|....*..
gi 1435005827 195 DMSAKTKIQKLSRAMRE 211
Cdd:COG0712   162 DGSVRGRLNRLRRALKG 178
PRK05758 PRK05758
F0F1 ATP synthase subunit delta; Validated
 36-209 2.34e-40

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 235593  Cd Length: 177  Bit Score: 135.68  E-value: 2.34e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827  36 GIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKMAASIMNPYVKRSVKVKSLNDmtAKERFSPLTCNLINLLAEN 115
Cdd:PRK05758    6 TVARPYAKALFEVALEKGSLDAWSEELTFLAEVAENEDLAALLSSPLVSAEQKKKLLAA--VFKSLSEYVQNFLKVLAEN 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827 116 GRLNNTPGVVSAFSTMMSVHRGEVPCTVTTASPLDEPTLAELKTVLKSFLskGQVLKLEVKIDPSIMGGMIVRIGEKYAD 195
Cdd:PRK05758   84 GRLALLPEILEQFEALRAEHENIVDAEVTSAFPLSEEQLDKLKAALEKRL--GRKVKLNEKVDPSLIGGVIIKVGDRVID 161

                         170
                  ....*....|....
gi 1435005827 196 MSAKTKIQKLSRAM 209
Cdd:PRK05758  162 GSVRGKLERLKDAL 175
PRK13429 PRK13429
F0F1 ATP synthase subunit delta; Provisional
 40-205 1.30e-31

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237386  Cd Length: 181  Bit Score: 113.38  E-value: 1.30e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827  40 RYATALYSAASKQNKLEQVEKELLRVAQILKE-PKMAASIMNPYVKRSVKVKSLNDMTAKERFSPLTCNLINLLAENGRL 118
Cdd:PRK13429    9 RYAKALFQLAKEKGQLDSVYEELKQLAELLEDsPELRDALSNPVLSAEEKKAVLEKLLGKLKVSPEVLNFLKLLADRRRL 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827 119 NNTPGVVSAFSTMMSVHRGEVPCTVTTASPLDEPTLAELKTVLKSFLskGQVLKLEVKIDPSIMGGMIVRIGEKYADMSA 198
Cdd:PRK13429   89 GILPEIAARYLELADEQKGIVRATVTSAVPLSEAQQEAIRQKLEKMT--GKKVELDTAVDPSLIGGVVVKIGDKVLDASV 166


                  ....*..
gi 1435005827 199 KTKIQKL 205
Cdd:PRK13429  167 RTQLRRL 173
ATP_synt_delta TIGR01145
ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in ...
 40-209 1.36e-29

ATP synthase, F1 delta subunit; This model describes the ATP synthase delta subunit in bacteria, mitochondria, and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 130215 [Multi-domain]  Cd Length: 172  Bit Score: 107.78  E-value: 1.36e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827  40 RYATALYSAASKQNKLEQVEKELLRVAQILK-EPKMAASIMNPYVKRSVKvKSLNDMTAKERFSPLTCNLINLLAENGRL 118
Cdd:TIGR01145   4 PYAKALFEIANEKSSLEEWGEMLNFVKEVLKnNKELKKFLSNPLISAEKK-KEFIKNVFGEQLDESSLNLLLLLAENGRL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827 119 NNTPGVVSAFSTMMSVHRGEVPCTVTTASPLDEPTLAELKTVLKSFLSKGQVlKLEVKIDPSIMGGMIVRIGEKYADMSA 198
Cdd:TIGR01145  83 AALPDILDQFLKLSYEAQQTADVEVISAKPLTEDQQAKIAEKLEKITGAAKV-KLNCKVDKDLIGGVIIRIGDRVIDGSV 161

                         170
                  ....*....|.
gi 1435005827 199 KTKIQKLSRAM 209
Cdd:TIGR01145 162 RGQLKRLSRQL 172
atpD CHL00119
ATP synthase CF1 delta subunit; Validated
 41-206 3.28e-18

ATP synthase CF1 delta subunit; Validated


Pssm-ID: 177042  Cd Length: 184  Bit Score: 78.49  E-value: 3.28e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827  41 YATALYSAASKQNKLEQVEKELLRVAQILKE-PKMAASIMNPYVKRSVKVKSLNDmTAKERFSPLTCNLINLLAENGRLN 119
Cdd:CHL00119   12 YAEALLEFAKEKNIMEQITADIQLILTFLNEsPELKKFLANPLISKNAKKEVIKK-TFGSQINENTLKFLMVLVDRGRIA 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827 120 NTPGVVSAFSTMMSVHRGEVPCTVTTASPLDEPTLAELKTVLKSFLSKGQVlKLEVKIDPSIMGGMIVRIGEKYADMSAK 199
Cdd:CHL00119   91 LLDAIIEKYLELVYKLASIKIAEVSTAVPLSSAQEEALIEKLKEMTNAKEI-KLVITVDPSLIGGFLIKIGSKVIDTSIK 169


                  ....*..
gi 1435005827 200 TKIQKLS 206
Cdd:CHL00119  170 GQLKQLA 176
PRK13430 PRK13430
F0F1 ATP synthase subunit delta; Provisional
 43-209 6.38e-18

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 237387 [Multi-domain]  Cd Length: 271  Bit Score: 79.60  E-value: 6.38e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827  43 TALYSAASKQNKLEQVEKELLRVAQIL-KEPKMAASIMNPYVKRSVKVKSLNDMTAKeRFSPLTCNLINLLAENGRLNNT 121
Cdd:PRK13430  105 RALLASAEAQGALDDVEDELFRLGRILaSNPELRLALSDRAAPAEAKRELLARLLYG-KVTPVTERLAEQAVGRPRGRSI 183

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827 122 PGVVSAFSTMMSVHRGEVPCTVTTASPLDEptlaELKTVLKSFLSK--GQVLKLEVKIDPSIMGGMIVRIGEKYADMSAK 199
Cdd:PRK13430  184 EEGLDELSNLAAARRGRSVATVTTAVPLSD----EQKQRLAAALSRiyGRPVHLNSEVDPSVLGGMRVQVGDEVIDGSVA 259

                         170
                  ....*....|
gi 1435005827 200 TKIQKLSRAM 209
Cdd:PRK13430  260 GRLERLRRRL 269
PRK13436 PRK13436
F0F1 ATP synthase subunit delta; Provisional
 41-211 1.97e-11

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184053  Cd Length: 179  Bit Score: 60.45  E-value: 1.97e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827  41 YATALYSAASKQNKLEQVEKELLRVAQILKEPKMAASIMNPY-VKRSVKVKSLNDmTAKERFSPLTCNLINLLAENGRLN 119
Cdd:PRK13436   11 YAEALFDIANEENNVEKYINEVFKIIEILKNNKDLIKLLTSYfIDKEEKFKIIDK-IFSAKIDIYLVNFLKILAKNNLFI 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827 120 NTPGVVSAFSTMMSVHRGEVPCTVTTASPLDEPTLAELKTVLKSFLSKGQVLKleVKIDPSIMGGMIVRIGEKYADMSAK 199
Cdd:PRK13436   90 YIKQILKKFVKLSNEKLNITYGEIYTTEPLSEVQISRFESKLSKKLNKKVHLV--NKIDPKLIAGIKIKVDNKVFENSIK 167

                         170
                  ....*....|..
gi 1435005827 200 TKIQKLSRAMRE 211
Cdd:PRK13436  168 SKLKELKKQVLK 179
PRK13441 PRK13441
F0F1 ATP synthase subunit delta; Provisional
 37-207 2.36e-11

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184054  Cd Length: 180  Bit Score: 60.15  E-value: 2.36e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827  37 IEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKMAASimNPYVKRSVKVKSLNDMTA--KERFSPLTCNLINLLAE 114
Cdd:PRK13441    6 IASKYARALLNVAIELEKEEEYGEFLDLVCQIYESAKEFFD--NPIVKPEKKVSLIKEIMKefGQEMDEFFENFLNLVFE 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827 115 NGRLNNTPGVVSAFSTMMSVHRGEVPCTVTTASPLDEPTLAELKTVLKSFLSKGQVlkLEVKIDPSIMGGMIVRIGEKYA 194
Cdd:PRK13441   84 NKRQKLLPQIRALFEYEKILSEQKVPVNLTTAHELSDEELKLLRKFVRKYVLRDPV--FEETIDESLIAGAVVEFEGKRL 161

                         170
                  ....*....|...
gi 1435005827 195 DMSAKTKIQKLSR 207
Cdd:PRK13441  162 DVTVQGRLKKIAR 174
PRK13434 PRK13434
F0F1 ATP synthase subunit delta; Provisional
 36-211 6.54e-11

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 139571  Cd Length: 184  Bit Score: 58.79  E-value: 6.54e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827  36 GIEGRYATALYSAAskqNKLEQVEKELLRVAQIL-KEPKMAASIMNPYVKRSVKVKSLnDMTAKERFSPLTCNLINLLAE 114
Cdd:PRK13434    5 GVSKVYASALLGAA---NSPEEVEQELGDLVQLLfKDEKIRNFFLSPTVSPEEKEQTL-AKNLRGKISDITLNFLGVLLN 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827 115 NGRLNNTPGVVSAFSTMMSVHRGEVPCTVTTASPLDEPTLAELKTVLKSFLskGQVLKLEVKIDPSIMGGMIVRIGEKYA 194
Cdd:PRK13434   81 KGRFIYLPEIQKDFTVELDKKKGRVRAQIVSYPSLEPAQVDKLGSILSEKF--KSEFILEVSEDKNLLGGFVVQFNDLKI 158

                         170
                  ....*....|....*..
gi 1435005827 195 DMSAKTKIQKLSRAMRE 211
Cdd:PRK13434  159 EKSIASQLGEIKKAMLE 175
PRK13428 PRK13428
F0F1 ATP synthase subunit delta; Provisional
 34-204 2.92e-08

F0F1 ATP synthase subunit delta; Provisional


Pssm-ID: 184048 [Multi-domain]  Cd Length: 445  Bit Score: 52.81  E-value: 2.92e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827  34 IHGIEGRYATALYSAASKQNKLEQVEKELLRVAQILK-EPKMAASIMNPYVKRSVKVKSL-NDMTAKERFSPLTCNLINL 111
Cdd:PRK13428  268 IDALEHVARLALLERAERAGQVDEVEDQLFRFSRILDaQPRLAILLSDYTVPADGRVALLrKVLGGASTVNPVTVALLSQ 347

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827 112 LAENGRLNNTPGVVSAFSTMMSVHRGEVPCTVTTASPLDEptlaELKTVLKSFLSK--GQVLKLEVKIDPSIMGGMIVRI 189
Cdd:PRK13428  348 TVELLRGQPAEEAVLFLAELAVARRGEVVAQVSAAAELSD----AQRTRLTEVLSRiyGRPVSVQLHIDPELLGGLSIAV 423

                         170
                  ....*....|....*
gi 1435005827 190 GEKYADMSAKTKIQK 204
Cdd:PRK13428  424 GDEVIDGTLSSRLAA 438
PRK08474 PRK08474
F0F1 ATP synthase subunit delta; Validated
 40-179 2.09e-07

F0F1 ATP synthase subunit delta; Validated


Pssm-ID: 236271  Cd Length: 176  Bit Score: 49.21  E-value: 2.09e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827  40 RYATALYSAASKqNKLEQVEKELLRVAQILKEPKMAASIMNPYVKRSVKVKSLNDMTAKErfSPLTCNLINLLAENGRLN 119
Cdd:PRK08474    8 RYAKALLSSLSS-DELNDIYSNLKILSSAFADEKFKEIISSPEISKEQKIEFLLSFVDNA--NAKFQNFIKLLAENKRLE 84

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1435005827 120 NTPGVVSAFSTMMSVHRGEVPCTVTTASPLDEPTLAELKTVL-KSFLSKgqvLKLEVKIDP 179
Cdd:PRK08474   85 LIPAIAKELERQIALKENEYVGVVYSNEKLSEETLKKLEEKLsKKFNAK---IKLKQKKSD 142
PRK14042 PRK14042
pyruvate carboxylase subunit B; Provisional
 25-139 4.85e-03

pyruvate carboxylase subunit B; Provisional


Pssm-ID: 172536 [Multi-domain]  Cd Length: 596  Bit Score: 37.39  E-value: 4.85e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1435005827  25 AKLVRPPVQIHGIEGRYATALYSAASKQN---KLEQVEKELLRVAQILKEPKMAASimnpyVKRSVKVKSLNDMTAKERF 101
Cdd:PRK14042  284 AQNIDPRVQLYQVPGGMISNLYNQLKEQNaldKMDAVHKEIPRVRKDLGYPPLVTP-----TSQVVGTQAVINVLTGERY 358

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1435005827 102 SPLTcNLINLLAEnGRLNNTPGVVSAFSTMMSVHRGEV 139
Cdd:PRK14042  359 KTIT-NEVKLYCQ-GKYGTPPGKISSALRKKAIGRTEV 394
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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