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Conserved domains on  [gi|1375916859|ref|XP_024445792|]
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uncharacterized protein LOC7467922 isoform X2 [Populus trichocarpa]

Protein Classification

SAUR-like auxin-responsive family protein( domain architecture ID 10494974)

SAUR-like auxin-responsive family protein similar to Arabidopsis thaliana SAUR proteins that may provide a mechanistic link between auxin and plasma membrane H+-ATPases (PM H+-ATPases)

Gene Ontology:  GO:0009733

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 69-139 1.40e-25

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


:

Pssm-ID: 460580  Cd Length: 92  Bit Score: 93.47  E-value: 1.40e-25
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1375916859  69 SCHSPEPPADVP-KGYLAVYVGPELRRFIIPTSYLSHSLFKVLLVKVEEEFGFDHTGALTIPCEIETFKFLL 139
Cdd:pfam02519  20 SSPRTTSSSDVPeKGHFVVYVGDERRRFVVPLEYLNHPLFRELLRMSEEEFGFPSDGPITLPCDVVVFEYLL 91
 
Name Accession Description Interval E-value
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 69-139 1.40e-25

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 93.47  E-value: 1.40e-25
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1375916859  69 SCHSPEPPADVP-KGYLAVYVGPELRRFIIPTSYLSHSLFKVLLVKVEEEFGFDHTGALTIPCEIETFKFLL 139
Cdd:pfam02519  20 SSPRTTSSSDVPeKGHFVVYVGDERRRFVVPLEYLNHPLFRELLRMSEEEFGFPSDGPITLPCDVVVFEYLL 91
PLN03090 PLN03090
auxin-responsive family protein; Provisional
 76-139 6.54e-22

auxin-responsive family protein; Provisional


Pssm-ID: 178639  Cd Length: 104  Bit Score: 84.44  E-value: 6.54e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1375916859  76 PADVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLVKVEEEFGFDHTGALTIPCEIETFKFLL 139
Cdd:PLN03090   37 PLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQQAEEEFGFDHDMGLTIPCEEVVFRSLT 100
 
Name Accession Description Interval E-value
Auxin_inducible pfam02519
Auxin responsive protein; This family consists of the protein products of the ARG7 auxin ...
 69-139 1.40e-25

Auxin responsive protein; This family consists of the protein products of the ARG7 auxin responsive genes family none of which have any identified functional role.


Pssm-ID: 460580  Cd Length: 92  Bit Score: 93.47  E-value: 1.40e-25
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1375916859  69 SCHSPEPPADVP-KGYLAVYVGPELRRFIIPTSYLSHSLFKVLLVKVEEEFGFDHTGALTIPCEIETFKFLL 139
Cdd:pfam02519  20 SSPRTTSSSDVPeKGHFVVYVGDERRRFVVPLEYLNHPLFRELLRMSEEEFGFPSDGPITLPCDVVVFEYLL 91
PLN03090 PLN03090
auxin-responsive family protein; Provisional
 76-139 6.54e-22

auxin-responsive family protein; Provisional


Pssm-ID: 178639  Cd Length: 104  Bit Score: 84.44  E-value: 6.54e-22
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1375916859  76 PADVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLVKVEEEFGFDHTGALTIPCEIETFKFLL 139
Cdd:PLN03090   37 PLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQQAEEEFGFDHDMGLTIPCEEVVFRSLT 100
PLN03219 PLN03219
uncharacterized protein; Provisional
 79-139 4.57e-18

uncharacterized protein; Provisional


Pssm-ID: 178758 [Multi-domain]  Cd Length: 108  Bit Score: 74.79  E-value: 4.57e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1375916859  79 VPKGYLAVYVGPEL--RRFIIPTSYLSHSLFKVLLVKVEEEFGFDHT-GALTIPCEIETFKFLL 139
Cdd:PLN03219   39 VPKGHVAVYVGEQMekKRFVVPISYLNHPLFREFLNRAEEECGFHHSmGGLTIPCREESFLHLI 102
PLN03220 PLN03220
uncharacterized protein; Provisional
 79-135 7.88e-17

uncharacterized protein; Provisional


Pssm-ID: 178759  Cd Length: 105  Bit Score: 71.70  E-value: 7.88e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1375916859  79 VPKGYLAVYVGPEL----RRFIIPTSYLSHSLFKVLLVKVEEEFGFDH-TGALTIPCEIETF 135
Cdd:PLN03220   35 VPKGHVAVYVGEQIemekKRFVVPISFLNHPSFKEFLSRAEEEFGFNHpMGGLTIPCREEVF 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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