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Conserved domains on  [gi|1343053047|ref|XP_023828996|]
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dnaJ homolog subfamily B member 6-like isoform X1 [Salvelinus alpinus]

Protein Classification

molecular chaperone DnaJ( domain architecture ID 1000952)

molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  2.10.230.10
Gene Ontology:  GO:0051082|GO:0005524|GO:0009408|GO:0006457
PubMed:  8016869|15063739|29290615
SCOP:  4003813|4002149

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PRK10767 super family cl35946
chaperone protein DnaJ; Provisional
 4-134 6.79e-40

chaperone protein DnaJ; Provisional


The actual alignment was detected with superfamily member PRK10767:

Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 143.36  E-value: 6.79e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYDQYGkegltgsggggggh 83
Cdd:PRK10767    6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKE-AEEKFKEIKEAYEVLSDPQKRAAYDQYG-------------- 70

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1343053047  84 yHNA-DH------FGGGFTFRNP-EDVFREFFGErdpfadffadddffGGGQRQQGVSR 134
Cdd:PRK10767   71 -HAAfEQggggggFGGGGGFGDIfGDIFGDIFGG--------------GRGGGRQRARR 114
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 4-134 6.79e-40

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 143.36  E-value: 6.79e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYDQYGkegltgsggggggh 83
Cdd:PRK10767    6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKE-AEEKFKEIKEAYEVLSDPQKRAAYDQYG-------------- 70

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1343053047  84 yHNA-DH------FGGGFTFRNP-EDVFREFFGErdpfadffadddffGGGQRQQGVSR 134
Cdd:PRK10767   71 -HAAfEQggggggFGGGGGFGDIfGDIFGDIFGG--------------GRGGGRQRARR 114
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-138 1.62e-36

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 134.27  E-value: 1.62e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkEDAERKFKELSEAYEVLSNANKRNLYDQYGKEGLTGSGGGGGGh 83
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGG- 78

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1343053047  84 yhNADHFGGGFtFRNPEDVFREFFGerdpfadffadddfFGGGQRQQGVSRSRTG 138
Cdd:TIGR02349  79 --GFNGFDIGF-FGDFGDIFGDFFG--------------GGGGSGRRRRSGPRRG 116
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 2.70e-36

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 124.89  E-value: 2.70e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPE-AEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 4-69 7.09e-36

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 126.36  E-value: 7.09e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1343053047   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYDQYG 69
Cdd:COG0484     2 YYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPE-AEEKFKEINEAYEVLSDPEKRAAYDRFG 66
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 4.99e-32

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 113.87  E-value: 4.99e-32
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047    2 TEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEDAERKFKELSEAYEVLSNANK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 9.71e-29

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 104.93  E-value: 9.71e-29
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSN 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPE-AEEKFKEINEAYEVLSD 55
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 4-134 6.79e-40

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 143.36  E-value: 6.79e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYDQYGkegltgsggggggh 83
Cdd:PRK10767    6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKE-AEEKFKEIKEAYEVLSDPQKRAAYDQYG-------------- 70

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1343053047  84 yHNA-DH------FGGGFTFRNP-EDVFREFFGErdpfadffadddffGGGQRQQGVSR 134
Cdd:PRK10767   71 -HAAfEQggggggFGGGGGFGDIfGDIFGDIFGG--------------GRGGGRQRARR 114
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-138 1.62e-36

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 134.27  E-value: 1.62e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkEDAERKFKELSEAYEVLSNANKRNLYDQYGKEGLTGSGGGGGGh 83
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGG- 78

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1343053047  84 yhNADHFGGGFtFRNPEDVFREFFGerdpfadffadddfFGGGQRQQGVSRSRTG 138
Cdd:TIGR02349  79 --GFNGFDIGF-FGDFGDIFGDFFG--------------GGGGSGRRRRSGPRRG 116
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 2.70e-36

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 124.89  E-value: 2.70e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDPE-AEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 4-69 7.09e-36

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 126.36  E-value: 7.09e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1343053047   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYDQYG 69
Cdd:COG0484     2 YYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDPE-AEEKFKEINEAYEVLSDPEKRAAYDRFG 66
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 4.99e-32

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 113.87  E-value: 4.99e-32
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047    2 TEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEDAERKFKELSEAYEVLSNANK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 4-144 2.76e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 117.56  E-value: 2.76e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYDQYGKEGLTGSGGGGggh 83
Cdd:PRK14294    6 YYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKE-AEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSG--- 81

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1343053047  84 yhnadhfGGGF--TFRNPEDVFREFFGerdpfadffadddfFGGGQRQQGVSRSRTGGPFFHD 144
Cdd:PRK14294   82 -------FSGFddIFSSFGDIFEDFFG--------------FGGGRRGRSRTAVRAGADLRYD 123
PRK14280 PRK14280
molecular chaperone DnaJ;
3-129 5.27e-30

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 117.13  E-value: 5.27e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNpdNKEDAERKFKELSEAYEVLSNANKRNLYDQYGKEGLTGSGGGGGG 82
Cdd:PRK14280    5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDIN--KEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGGF 82

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1343053047  83 hyhNADHFGGGFTFrnpEDVFREFFGerdpfadffadddffGGGQRQ 129
Cdd:PRK14280   83 ---GGGDFGGGFGF---EDIFSSFFG---------------GGGRRR 108
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 3-139 7.78e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 117.22  E-value: 7.78e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYDQYGKEGLTGSGGGGGg 82
Cdd:PRK14281    4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKE-AEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGG- 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1343053047  83 hyhNADHFGGGFTFRNPEDVFREFF--GERDPFADFFADDDFFGGGQRQqgvsRSRTGG 139
Cdd:PRK14281   82 ---GPGYGGGGGDFNDIFSAFNDMFggGARRGGGSPFGFEDVFGGGGRR----RRASAG 133
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 3-62 2.59e-29

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 106.62  E-value: 2.59e-29
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKeDAERKFKELSEAYEVLSNANKR 62
Cdd:COG5407     1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDP-KAEERFKEINEAYELLSDAEKR 59
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 3-107 3.07e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 115.25  E-value: 3.07e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkEDAERKFKELSEAYEVLSNANKRNLYDQYGKEGLTGSGGGGGG 82
Cdd:PRK14291    4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG 81

                          90       100
                  ....*....|....*....|....*
gi 1343053047  83 HYHNADHFGGgftfrNPEDVFREFF 107
Cdd:PRK14291   82 QEGFSDFGGG-----NIEDILEDVF 101
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 3-134 3.81e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 114.95  E-value: 3.81e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkEDAERKFKELSEAYEVLSNANKRNLYDQYGKegltgsgGGGGG 82
Cdd:PRK14298    6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRFGH-------AGIDN 76

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1343053047  83 HYHNADHFGGGfTFRNPEDVFREFFGerdpfadffadddfFGGGQRQQGVSR 134
Cdd:PRK14298   77 QYSAEDIFRGA-DFGGFGDIFEMFFG--------------GGGRRGRMGPRR 113
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 3-108 5.88e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 114.26  E-value: 5.88e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEDAERKFKELSEAYEVLSNANKRNLYDQYGkegltgsgggggg 82
Cdd:PRK14290    4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTG------------- 70

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1343053047  83 hyhNADHFGGG-------FT-FRNPEDVFREFFG 108
Cdd:PRK14290   71 ---TVDFGAGGsnfnwdnFThFSDINDIFNQIFG 101
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 9.71e-29

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 104.93  E-value: 9.71e-29
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSN 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPE-AEEKFKEINEAYEVLSD 55
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 2-108 1.85e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 113.01  E-value: 1.85e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   2 TEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYDQYGKEGLtgsggggg 81
Cdd:PRK14284    1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAE-AEKRFKEVSEAYEVLSDAQKRESYDRYGKDGP-------- 71

                          90       100
                  ....*....|....*....|....*..
gi 1343053047  82 ghYHNADHFGGGfTFRNPEDVFREFFG 108
Cdd:PRK14284   72 --FAGAGGFGGA-GMGNMEDALRTFMG 95
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 3-109 3.03e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 112.14  E-value: 3.03e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYDQYGKEGLtgsgggggg 82
Cdd:PRK14301    5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPE-AEQKFKEAAEAYEVLRDAEKRARYDRFGHAGV--------- 74

                          90       100       110
                  ....*....|....*....|....*....|
gi 1343053047  83 hyhNADHFGGGFTfrNPEDVFREF---FGE 109
Cdd:PRK14301   75 ---NGNGGFGGFS--SAEDIFSHFsdiFGD 99
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 3-110 3.82e-28

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 111.81  E-value: 3.82e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEDAERKFKELSEAYEVLSNANKRNLYDQYGkegltgsgGGGGG 82
Cdd:PRK14282    5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFG--------YVGEQ 76

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1343053047  83 HYHNADHFGGGF---TFRNPE-----DVFREFFGER 110
Cdd:PRK14282   77 PPYQETESGGGFfedIFKDFEnifnrDIFDIFFGER 112
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 3-109 1.34e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 110.66  E-value: 1.34e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYDQYGKEGLTGSGGGGGG 82
Cdd:PRK14277    6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKE-AEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQGG 84

                          90       100       110
                  ....*....|....*....|....*....|
gi 1343053047  83 HYHNAdhFGGG---FTFRNPEDVFREFFGE 109
Cdd:PRK14277   85 FGQGG--FGGGgfdFDFGGFGDIFEDIFGD 112
PRK14289 PRK14289
molecular chaperone DnaJ;
3-134 4.37e-27

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 109.15  E-value: 4.37e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYDQYGKEGLTGSGGgggg 82
Cdd:PRK14289    6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKE-AEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAG---- 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1343053047  83 hyhNADHFGGGFTFrnpEDVFREFFGERDPFADFFADDDFFGGGQRQQGVSR 134
Cdd:PRK14289   81 ---GGGFSGEGMSM---EDIFSMFGDIFGGHGGGFGGFGGFGGGGSQQRVFR 126
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 2-108 7.99e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 108.64  E-value: 7.99e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   2 TEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkEDAERKFKELSEAYEVLSNANKRNLYDQYGKEGLTGSGGGGG 81
Cdd:PRK14276    4 TEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE--PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGA 81

                          90       100
                  ....*....|....*....|....*..
gi 1343053047  82 GHYHNADHFGGGFTFrnpEDVFREFFG 108
Cdd:PRK14276   82 GGFGGFDGSGGFGGF---EDIFSSFFG 105
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-67 2.60e-26

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 99.79  E-value: 2.60e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1343053047   1 MTEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEDAERKFKELSEAYEVLSNANKRNLYDQ 67
Cdd:COG2214     4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYDR 70
PRK14297 PRK14297
molecular chaperone DnaJ;
3-108 4.42e-26

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 106.41  E-value: 4.42e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYDQYGKEGLTGSGGGGGG 82
Cdd:PRK14297    5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKE-AEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGSG 83

                          90       100
                  ....*....|....*....|....*..
gi 1343053047  83 HYHNADHFG-GGFtfrnpEDVFREFFG 108
Cdd:PRK14297   84 GFGGFDFSDmGGF-----GDIFDSFFG 105
PRK14293 PRK14293
molecular chaperone DnaJ;
1-138 1.04e-24

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 102.38  E-value: 1.04e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   1 MTEYYQILGVQRNASAEDIKKAYRKLALKWHPDKnpdNKE-DAERKFKELSEAYEVLSNANKRNLYDQYGKEGLTGSGgg 79
Cdd:PRK14293    2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDV---NKEpGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAA-- 76

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1343053047  80 ggghyhNADHFG--GGFTfrnpeDVFREFFGerdpfadffadddffG-GGQRQQGVSRSRTG 138
Cdd:PRK14293   77 ------GFPDMGdmGGFA-----DIFETFFS---------------GfGGAGGQGGRRRRRG 112
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 2-108 1.52e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 102.05  E-value: 1.52e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   2 TEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkEDAERKFKELSEAYEVLSNANKRNLYDQYGKEGLTGSGGGGG 81
Cdd:PRK14278    3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGGGG 80

                          90       100
                  ....*....|....*....|....*..
gi 1343053047  82 ghyhnadhFGGGFTfrNPEDVFREFFG 108
Cdd:PRK14278   81 --------FGGGFG--GLGDVFEAFFG 97
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 3-69 4.59e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 100.67  E-value: 4.59e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkEDAERKFKELSEAYEVLSNANKRNLYDQYG 69
Cdd:PRK14283    6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFG 70
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 4-128 1.14e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 99.68  E-value: 1.14e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYDQYGKEGLTGsggggggh 83
Cdd:PRK14286    6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKE-SEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNA-------- 76

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1343053047  84 yhNADHFG-GGFT-----FRNPEDVFREFFGerdpfadfFADDDFFGGGQR 128
Cdd:PRK14286   77 --GAGGFGqGAYTdfsdiFGDFGDIFGDFFG--------GGRGGGSGGGRR 117
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 3-106 3.38e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 98.14  E-value: 3.38e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYDQYGkegltgsgggggg 82
Cdd:PRK14285    4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKE-AESIFKEATEAYEVLIDDNKRAQYDRFG------------- 69

                          90       100
                  ....*....|....*....|....*....
gi 1343053047  83 hyHNADHFGGGFT-----FRNPEDVFREF 106
Cdd:PRK14285   70 --HTAFEGGGGFEgfsggFSGFSDIFEDF 96
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-108 1.08e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 96.88  E-value: 1.08e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   1 MTEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkEDAERKFKELSEAYEVLSNANKRNLYDQYGKEGLTGSGGgg 80
Cdd:PRK14292    1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPG-- 76

                          90       100
                  ....*....|....*....|....*....
gi 1343053047  81 gghyhnADHFGG-GFtfrNPEDVFREFFG 108
Cdd:PRK14292   77 ------GDPFGGmGF---DPMDIFEQLFG 96
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 3-109 5.71e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 93.46  E-value: 5.71e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkEDAERKFKELSEAYEVLSNANKRNLYDQYGKEGLTGSGGGGGG 82
Cdd:PRK14299    5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP 82

                          90       100
                  ....*....|....*....|....*..
gi 1343053047  83 hyhnADHFGGGFTFRNPEDvFREFFGE 109
Cdd:PRK14299   83 ----GPPGGGDFSGFNVGD-FSDFFQQ 104
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 3-108 1.77e-20

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 91.04  E-value: 1.77e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDnkedaERKFKELSEAYEVLSNANKRNLYDQYGKEGltgsgggggg 82
Cdd:PTZ00037   29 KLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRKIYDEYGEEG---------- 93

                          90       100
                  ....*....|....*....|....*.
gi 1343053047  83 hyhnadhFGGGFTFRNPEDVFREFFG 108
Cdd:PTZ00037   94 -------LEGGEQPADASDLFDLIFG 112
PRK14279 PRK14279
molecular chaperone DnaJ;
3-67 3.77e-20

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 89.79  E-value: 3.77e-20
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYDQ 67
Cdd:PRK14279   10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPA-AEERFKAVSEAHDVLSDPAKRKEYDE 73
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 3-134 4.94e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 89.30  E-value: 4.94e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNpdNKEDAERKFKELSEAYEVLSNANKRNLYDQYGkegltgsgggggg 82
Cdd:PRK14287    5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVN--KAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFG------------- 69

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1343053047  83 HYHNADHFGGGFT--FRNPEDVFREFFGerdpfadffadddfFGGGQRQQGVSR 134
Cdd:PRK14287   70 HTDPNQGFGGGGAgdFGGFSDIFDMFFG--------------GGGGRRNPNAPR 109
PRK14295 PRK14295
molecular chaperone DnaJ;
3-67 1.64e-19

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 87.98  E-value: 1.64e-19
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYDQ 67
Cdd:PRK14295   10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAK-AEERFKEISEAYDVLSDEKKRKEYDE 73
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 3-145 2.96e-18

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 84.30  E-value: 2.96e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNpdNKEDAERKFKELSEAYEVLSNANKRNLYDQYGKEgltgsggggGG 82
Cdd:PRK14300    4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTT--DAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHD---------AF 72

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1343053047  83 HYHNADHFGGGFTFRNPE--DVFREFFGErdpfadffadddFFGGGQRQQGVSRSRTGGPFFHDF 145
Cdd:PRK14300   73 QNQQSRGGGGNHGGFHPDinDIFGDFFSD------------FMGGSRRSRPTSSKVRGSDLKYNL 125
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 3-108 1.45e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 82.30  E-value: 1.45e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNpdNKEDAERKFKELSEAYEVLSNANKRNLYDQYGKEGLTGSGGGGGG 82
Cdd:PRK14296    5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLN--KSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSSN 82

                          90       100
                  ....*....|....*....|....*...
gi 1343053047  83 HYHNADHFG--GGFTFRNPEDVFREFFG 108
Cdd:PRK14296   83 FGDFEDLFSnmGSSGFSSFTNIFSDFFG 110
PRK10266 PRK10266
curved DNA-binding protein;
3-110 2.68e-17

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 80.64  E-value: 2.68e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1343053047   3 EYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNkeDAERKFKELSEAYEVLSNANKRNLYDQYGKEGLTGSGGGGGG 82
Cdd:PRK10266    5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEP--DAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQ 82

                          90       100
                  ....*....|....*....|....*...
gi 1343053047  83 HYHNADHFGGGFtfrnpEDVFREFFGER 110
Cdd:PRK10266   83 HGDGQSFNAEDF-----DDIFSSIFGQH 105
PRK14288 PRK14288
molecular chaperone DnaJ;
4-71 3.16e-17

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 81.27  E-value: 3.16e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1343053047   4 YYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNKEdAERKFKELSEAYEVLSNANKRNLYDQYGKE 71
Cdd:PRK14288    5 YYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKE-AEEKFKLINEAYGVLSDEKKRALYDRYGKK 71
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-64 2.46e-12

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 61.35  E-value: 2.46e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1343053047   1 MTEYYQILGVQRNASAEDIKKAYRKLALKWHPDK-----NPDNKEDAERKFKELSEAYEVLSNANKRNL 64
Cdd:COG1076     3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLALQKAAAINEAYETLKDPRGIDL 71
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 2-69 4.07e-11

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 64.04  E-value: 4.07e-11
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1343053047    2 TEYYQILGVQRNASAEDIKKAYRKLALKWHPDKNPDNkeDAERKFKELSEAYEVLSNANKRNLYDQYG 69
Cdd:PTZ00341   573 TLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKFG 638
djlA PRK09430
co-chaperone DjlA;
5-56 2.67e-07

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 50.97  E-value: 2.67e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1343053047   5 YQILGVQRNASAEDIKKAYRKLALKWHPDK------NPDNKEDAERKFKELSEAYEVL 56
Cdd:PRK09430  203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvakglPPEMMEMAKEKAQEIQAAYELI 260
hscB PRK01356
co-chaperone HscB; Provisional
 1-65 8.75e-06

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 45.25  E-value: 8.75e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1343053047   1 MTEYYQILGVQR--NASAEDIKKAYRKLALKWHPD--KNPDNKEDAERKFKELSEAYEVLSNANKRNLY 65
Cdd:PRK01356    1 MQNYFQLLGLPQeyNIDLKILEKQYFAMQVKYHPDkaKTLQEKEQNLIIASELNNAYSTLKDALKRAEY 69
PHA03102 PHA03102
Small T antigen; Reviewed
 6-56 9.64e-06

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 45.05  E-value: 9.64e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1343053047   6 QILGVQRNA--SAEDIKKAYRKLALKWHPDKNPDnkedaERKFKELSEAYEVL 56
Cdd:PHA03102    9 DLLGLPRSAwgNLPLMRKAYLRKCLEFHPDKGGD-----EEKMKELNTLYKKF 56
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 3-66 2.27e-05

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 45.79  E-value: 2.27e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1343053047   3 EYYQILGVQR---NASAEDIKKAYRKLALKWHPDKNPDNKEDAERK-FKELSEAYEVLSNANKRNLYD 66
Cdd:COG5269    44 DLYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEfFKLIQKAREVLGDRKLRLQYD 111
PHA02624 PHA02624
large T antigen; Provisional
 6-69 8.53e-05

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 44.20  E-value: 8.53e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1343053047   6 QILGVQRNA--SAEDIKKAYRKLALKWHPDKNPDnkedaERKFKELSEAYEVLsNANKRNLYDQYG 69
Cdd:PHA02624   15 DLLGLPMAAwgNLPLMRKAYLRKCKEYHPDKGGD-----EEKMKRLNSLYKKL-QEGVKSARQSFG 74
hscB PRK00294
co-chaperone HscB; Provisional
 23-65 9.90e-03

co-chaperone HscB; Provisional


Pssm-ID: 166894 [Multi-domain]  Cd Length: 173  Bit Score: 36.37  E-value: 9.90e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1343053047  23 YRKLALKWHPDKNPDNKEDAER----KFKELSEAYEVLSNANKRNLY 65
Cdd:PRK00294   27 YRELAREVHPDRFADAPEREQRlaleRSASLNEAYQTLKSPPRRARY 73
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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