NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1250154624|ref|XP_022617529|]
View 

dnaJ homolog subfamily B member 6-like [Seriola dumerili]

Protein Classification

molecular chaperone DnaJ( domain architecture ID 1000952)

molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  2.10.230.10
Gene Ontology:  GO:0051082|GO:0005524|GO:0009408|GO:0006457
PubMed:  8016869|15063739|29290615
SCOP:  4003813|4002149

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PRK10767 super family cl35946
chaperone protein DnaJ; Provisional
 3-140 7.78e-47

chaperone protein DnaJ; Provisional


The actual alignment was detected with superfamily member PRK10767:

Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 160.31  E-value: 7.78e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGGRGs 82
Cdd:PRK10767    5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGG- 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1250154624  83 hfhngdhfheqftfrnpedvfrefFGGRDPFADLFGpDPFSeDPFFGSGRQHQSRAGR 140
Cdd:PRK10767   83 ------------------------FGGGGGFGDIFG-DIFG-DIFGGGRGGGRQRARR 114
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 3-140 7.78e-47

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 160.31  E-value: 7.78e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGGRGs 82
Cdd:PRK10767    5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGG- 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1250154624  83 hfhngdhfheqftfrnpedvfrefFGGRDPFADLFGpDPFSeDPFFGSGRQHQSRAGR 140
Cdd:PRK10767   83 ------------------------FGGGGGFGDIFG-DIFG-DIFGGGRGGGRQRARR 114
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-140 9.61e-44

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 151.60  E-value: 9.61e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPEnkDEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGGRGS 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGG 78

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1250154624  83 HFHNGDHFHeqftFRNPEDVFREFFGGrdpfadlfgpdpfsedpFFGSGRQHQSRAGR 140
Cdd:TIGR02349  79 GFNGFDIGF----FGDFGDIFGDFFGG-----------------GGGSGRRRRSGPRR 115
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 1.01e-36

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 124.51  E-value: 1.01e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-74 8.54e-36

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 124.81  E-value: 8.54e-36
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLT 74
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAEL 71
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 1.33e-30

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 108.86  E-value: 1.33e-30
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624    2 VDYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKDEAEKKFKELSEAYEVLSDANK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-125 3.94e-30

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 117.23  E-value: 3.94e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPEnkDEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGgrgs 82
Cdd:NF037946    6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKA--PDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGEGG---- 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1250154624  83 hfhngdhfheqFTFrNPEDVFREFFG---GRDPFADLFGPDPFSED 125
Cdd:NF037946   80 -----------FGF-DAFDVFSSFFEtinKSGAFLDDSVDESVSAD 113
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 1.87e-28

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 103.01  E-value: 1.87e-28
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSD 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDP-EAEEKFKEINEAYEVLSD 55
 
Name Accession Description Interval E-value
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 3-140 7.78e-47

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 160.31  E-value: 7.78e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGGRGs 82
Cdd:PRK10767    5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDK-EAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGG- 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1250154624  83 hfhngdhfheqftfrnpedvfrefFGGRDPFADLFGpDPFSeDPFFGSGRQHQSRAGR 140
Cdd:PRK10767   83 ------------------------FGGGGGFGDIFG-DIFG-DIFGGGRGGGRQRARR 114
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 3-140 9.61e-44

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 151.60  E-value: 9.61e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPEnkDEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGGRGS 82
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGG 78

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1250154624  83 HFHNGDHFHeqftFRNPEDVFREFFGGrdpfadlfgpdpfsedpFFGSGRQHQSRAGR 140
Cdd:TIGR02349  79 GFNGFDIGF----FGDFGDIFGDFFGG-----------------GGGSGRRRRSGPRR 115
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 3-139 3.76e-37

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 134.87  E-value: 3.76e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGGRGs 82
Cdd:PRK14301    5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNP-EAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGG- 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1250154624  83 hfhngdhfheqftFRNPEDVFREFfggRDPFADLFGpdpFSEDpffGSGRQHQSRAG 139
Cdd:PRK14301   83 -------------FSSAEDIFSHF---SDIFGDLFG---FSGG---GSRRGPRPQAG 117
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 3-139 6.33e-37

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 134.12  E-value: 6.33e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGGRGS 82
Cdd:PRK14294    5 DYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDK-EAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSGFS 83

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1250154624  83 HFhngdhfheqftfrnpEDVFREFfggRDPFADLFGpdpfsedpfFGSGRQHQSRAG 139
Cdd:PRK14294   84 GF---------------DDIFSSF---GDIFEDFFG---------FGGGRRGRSRTA 113
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 1.01e-36

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 124.51  E-value: 1.01e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGDP-EAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 3-74 8.54e-36

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 124.81  E-value: 8.54e-36
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLT 74
Cdd:COG0484     1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGDP-EAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAEL 71
PRK14280 PRK14280
molecular chaperone DnaJ;
3-120 3.05e-35

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 129.84  E-value: 3.05e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPEnkDEAEKKFKELSEAYEVLSDANKRSIYDRYGKeglTGNNGGRGS 82
Cdd:PRK14280    5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE--EGADEKFKEISEAYEVLSDDQKRAQYDQFGH---AGPNQGFGG 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1250154624  83 HFHNGDHFHEQFTFrnpEDVFREFFGG----RDPFADLFGPD 120
Cdd:PRK14280   80 GGFGGGDFGGGFGF---EDIFSSFFGGggrrRDPNAPRQGAD 118
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 3-137 3.91e-34

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 126.58  E-value: 3.91e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKDEAEKKFKELSEAYEVLSDANKRSIYDRYGkeglTGNNGGRGS 82
Cdd:PRK14290    4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTG----TVDFGAGGS 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1250154624  83 HFHNGDHFHeqftFRNPEDVFREFFGGRdpfadlfgpdpFSEDPFFGSGRQHQSR 137
Cdd:PRK14290   80 NFNWDNFTH----FSDINDIFNQIFGGN-----------FGSDFFSGFGNQQSTR 119
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 3-143 5.63e-34

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 126.45  E-value: 5.63e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKDEAEKKFKELSEAYEVLSDANKRSIYDRYG--KEGLTGNNGGR 80
Cdd:PRK14282    5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGyvGEQPPYQETES 84

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1250154624  81 GSHFHngdhfheqftfrnpEDVFREffggrdpFADLFGPDPFseDPFFGSGRQHQSRAGRSRT 143
Cdd:PRK14282   85 GGGFF--------------EDIFKD-------FENIFNRDIF--DIFFGERRTQEEQREYARR 124
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 3-139 9.17e-34

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 126.46  E-value: 9.17e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGL--TGNNGGR 80
Cdd:PRK14281    4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNK-EAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVgsSAASGGG 82

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1250154624  81 GSHFHNGDHFHEQFTfrnpedVFREFFGGRDPFADlFGPDPFsEDPFFGSGRQHQSRAG 139
Cdd:PRK14281   83 PGYGGGGGDFNDIFS------AFNDMFGGGARRGG-GSPFGF-EDVFGGGGRRRRASAG 133
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 3-123 1.51e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 125.65  E-value: 1.51e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPEnkDEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGGRGS 82
Cdd:PRK14291    4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG 81

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1250154624  83 HFHNGDhfheqFTFRNPEDVFREFFGGRDpFADLFGPDPFS 123
Cdd:PRK14291   82 QEGFSD-----FGGGNIEDILEDVFDIFG-FGDIFGRRRAT 116
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 3-120 4.72e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 124.04  E-value: 4.72e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPEnkDEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGGRGS 82
Cdd:PRK14276    5 EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE--PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGAG 82

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1250154624  83 HFHNgdhFHEQFTFRNPEDVFREFFGG----RDPFADLFGPD 120
Cdd:PRK14276   83 GFGG---FDGSGGFGGFEDIFSSFFGGggarRNPNAPRQGDD 121
PRK14289 PRK14289
molecular chaperone DnaJ;
3-137 9.11e-33

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 123.40  E-value: 9.11e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGGRGs 82
Cdd:PRK14289    6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDK-EAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGGG- 83

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1250154624  83 hfHNGDHFHEQFTFRNPEDVFREFFGGrdpFADLFGpdpfsedpfFGSGRQHQSR 137
Cdd:PRK14289   84 --FSGEGMSMEDIFSMFGDIFGGHGGG---FGGFGG---------FGGGGSQQRV 124
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 3-142 1.93e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 122.65  E-value: 1.93e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPEnkDEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGnnggrgs 82
Cdd:PRK14298    6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDN------- 76

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1250154624  83 hfhngdhfheQFTfrnPEDVFREF-FGGrdpFADLFgpdpfseDPFFGSGRQhQSRAGRSR 142
Cdd:PRK14298   77 ----------QYS---AEDIFRGAdFGG---FGDIF-------EMFFGGGGR-RGRMGPRR 113
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 3-139 6.57e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 121.10  E-value: 6.57e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGGRGS 82
Cdd:PRK14284    2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA-EAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGG 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624  83 HfhngdhfheqfTFRNPEDVFREF---FGGrdpfaDLFGPDPFSEDPFFGSGRQHQSRAG 139
Cdd:PRK14284   81 A-----------GMGNMEDALRTFmgaFGG-----EFGGGGSFFEGLFGGLGEAFGMRGG 124
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 1.33e-30

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 108.86  E-value: 1.33e-30
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624    2 VDYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKDEAEKKFKELSEAYEVLSDANK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14297 PRK14297
molecular chaperone DnaJ;
3-109 1.93e-30

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 117.19  E-value: 1.93e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGGRGS 82
Cdd:PRK14297    5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNK-EAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGSG 83

                          90       100
                  ....*....|....*....|....*..
gi 1250154624  83 HFHNGDhFHEQFTFrnpEDVFREFFGG 109
Cdd:PRK14297   84 GFGGFD-FSDMGGF---GDIFDSFFGG 106
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-125 3.94e-30

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 117.23  E-value: 3.94e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPEnkDEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGgrgs 82
Cdd:NF037946    6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKA--PDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGEGG---- 79

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1250154624  83 hfhngdhfheqFTFrNPEDVFREFFG---GRDPFADLFGPDPFSED 125
Cdd:NF037946   80 -----------FGF-DAFDVFSSFFEtinKSGAFLDDSVDESVSAD 113
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 3-139 1.06e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 114.92  E-value: 1.06e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPEnkDEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGnnggrgs 82
Cdd:PRK14283    6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDG------- 76

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1250154624  83 hFHNGDHFHEQftfrNPEDVFREFFGGRDPFADLFGpdpfsedpfFGSGRQHQSRAG 139
Cdd:PRK14283   77 -FSQEDIFNNI----NFEDIFQGFGFGIGNIFDMFG---------FGGGSRHGPQRG 119
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 3-140 1.86e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 114.51  E-value: 1.86e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGGRGS 82
Cdd:PRK14277    6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDK-EAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQGG 84

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1250154624  83 hFHNGDHFHEQFTFRnpedvfrefFGGrdpFADLFGpDPFSEdpFFGSGRQHQSRAGR 140
Cdd:PRK14277   85 -FGQGGFGGGGFDFD---------FGG---FGDIFE-DIFGD--FFGTGRRRAETGPQ 126
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 3-109 2.38e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 113.99  E-value: 2.38e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPEnkDEAEKKFKELSEAYEVLSDANKRSIYDRYGKEglTGNNGGRGS 82
Cdd:PRK14278    4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDP--LESAGGGGG 79

                          90       100
                  ....*....|....*....|....*..
gi 1250154624  83 HFHNGdhfheqftFRNPEDVFREFFGG 109
Cdd:PRK14278   80 GFGGG--------FGGLGDVFEAFFGG 98
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 4-109 6.00e-29

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 113.16  E-value: 6.00e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   4 YYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGGRGSh 83
Cdd:PRK14286    6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNK-ESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFGQ- 83

                          90       100
                  ....*....|....*....|....*.
gi 1250154624  84 fhnGDHFHEQFTFRNPEDVFREFFGG 109
Cdd:PRK14286   84 ---GAYTDFSDIFGDFGDIFGDFFGG 106
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 1.87e-28

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 103.01  E-value: 1.87e-28
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSD 58
Cdd:cd06257     1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDP-EAEEKFKEINEAYEVLSD 55
PRK14293 PRK14293
molecular chaperone DnaJ;
1-143 2.41e-28

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 111.24  E-value: 2.41e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   1 MVDYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdeAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGgr 80
Cdd:PRK14293    2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPG--AEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAG-- 77

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1250154624  81 gshfhngdhfheqftfrnPEDvfrefFGGRDPFADLFgpdpfsEDPFFGSGRQHQSRAGRSRT 143
Cdd:PRK14293   78 ------------------FPD-----MGDMGGFADIF------ETFFSGFGGAGGQGGRRRRR 111
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-67 7.21e-28

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 102.87  E-value: 7.21e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1250154624   1 MVDYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKDEAEKKFKELSEAYEVLSDANKRSIYDR 67
Cdd:COG2214     4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYDR 70
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 3-62 8.21e-28

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 101.61  E-value: 8.21e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKDeAEKKFKELSEAYEVLSDANKR 62
Cdd:COG5407     1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGDPK-AEERFKEINEAYELLSDAEKR 59
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-109 4.20e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 108.05  E-value: 4.20e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   1 MVDYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPEnkDEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGgr 80
Cdd:PRK14292    1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPG-- 76

                          90       100
                  ....*....|....*....|....*....
gi 1250154624  81 gshfhnGDHFHEQFTfrNPEDVFREFFGG 109
Cdd:PRK14292   77 ------GDPFGGMGF--DPMDIFEQLFGG 97
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 3-140 3.09e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 104.25  E-value: 3.09e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPEnkDEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNN----- 77
Cdd:PRK14299    5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWqgppp 82

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1250154624  78 GGRGSHFHNGdhfheqFTFRNPEDVFREFFGGRDPFADLfgpdpfsEDPFFGSGRqhQSRAGR 140
Cdd:PRK14299   83 GPPGGGDFSG------FNVGDFSDFFQQLFGGRGGFGGF-------GDLFGSVGR--RARKGR 130
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 3-110 3.89e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 105.07  E-value: 3.89e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNG--GR 80
Cdd:PRK14285    4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNK-EAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGfeGF 82

                          90       100       110
                  ....*....|....*....|....*....|
gi 1250154624  81 GSHFHNGDHFHEQFTfrnpeDVFREFFGGR 110
Cdd:PRK14285   83 SGGFSGFSDIFEDFG-----DIFDSFFTGN 107
PRK14295 PRK14295
molecular chaperone DnaJ;
3-139 2.42e-25

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 103.39  E-value: 2.42e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYDR----YGKEGL---TG 75
Cdd:PRK14295   10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDA-KAEERFKEISEAYDVLSDEKKRKEYDEarslFGNGGFrpgPG 88

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1250154624  76 NNGGRGSHFHNGDHFHEQFTFRNPEDvfrefFGGR--DPFADLFGpdpfsedpffGSGRQHQSRAG 139
Cdd:PRK14295   89 GGGGGGFNFDLGDLFGGGAQGGGGAG-----GGGGlgDVFGGLFN----------RGGRRTQPRRG 139
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 4-109 2.48e-24

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 101.05  E-value: 2.48e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   4 YYQVLGVRRDASADDIKKAYRKLALRWHPDK--NPEnkdeaekKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGGrg 81
Cdd:PTZ00037   30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKggDPE-------KFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQP-- 100

                          90       100
                  ....*....|....*....|....*...
gi 1250154624  82 shfhngdhfheqftfRNPEDVFREFFGG 109
Cdd:PTZ00037  101 ---------------ADASDLFDLIFGG 113
PRK14279 PRK14279
molecular chaperone DnaJ;
3-118 2.50e-23

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 97.88  E-value: 2.50e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYDR----YGKEGLTGNNG 78
Cdd:PRK14279   10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDP-AAEERFKAVSEAHDVLSDPAKRKEYDEtrrlFAGGGFGGRRF 88

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1250154624  79 GRGSHFHNGDHFHEQFTFrNPEDVFREFFGGRDP-FADLFG 118
Cdd:PRK14279   89 DGGGGFGGFGTGGDGAEF-NLNDLFDAAGRGGGGgIGDLFG 128
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 3-107 1.30e-22

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 97.19  E-value: 1.30e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNpeNKDEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGgrgs 82
Cdd:TIGR03835   3 DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRN--KAPDAASIFAEINEANDVLSNPKKRANYDKYGHDGVDREDD---- 76

                          90       100
                  ....*....|....*....|....*
gi 1250154624  83 hfhngdhfheqFTFRnpEDVFREFF 107
Cdd:TIGR03835  77 -----------FDFQ--ADVFNSFF 88
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 3-120 1.03e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 93.15  E-value: 1.03e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPEnkDEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGGRGS 82
Cdd:PRK14287    5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA--PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGGGA 82

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1250154624  83 hfhnGDhfheqftFRNPEDVFREFFGG----RDPFADLFGPD 120
Cdd:PRK14287   83 ----GD-------FGGFSDIFDMFFGGgggrRNPNAPRQGAD 113
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 3-142 5.15e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 91.23  E-value: 5.15e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNpeNKDEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGGRGS 82
Cdd:PRK14300    4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTT--DAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGG 81

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624  83 HFHNGdhFHEQFTfrnpeDVFREFFGGrdpfadlfgpdpfsedpFFGSGRQHQSRAGRSR 142
Cdd:PRK14300   82 GNHGG--FHPDIN-----DIFGDFFSD-----------------FMGGSRRSRPTSSKVR 117
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 3-143 9.04e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 87.69  E-value: 9.04e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENkdEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNNGgrgs 82
Cdd:PRK14296    5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSP--DAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSG---- 78

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1250154624  83 hFHNGdhfheqftFRNPEDVFREFfgGRDPFADlFGpDPFSEdpFFGSGRQHQSRAGRSRT 143
Cdd:PRK14296   79 -FSSN--------FGDFEDLFSNM--GSSGFSS-FT-NIFSD--FFGSNKSDYQRSTKGQS 124
PRK14288 PRK14288
molecular chaperone DnaJ;
2-96 1.33e-18

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 84.36  E-value: 1.33e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   2 VDYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENKdEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTgNNGGRG 81
Cdd:PRK14288    3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK-EAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLN-QAGASQ 80

                          90       100
                  ....*....|....*....|
gi 1250154624  82 SHFHN-----GDHFHEQFTF 96
Cdd:PRK14288   81 SDFSDffedlGSFFEDAFGF 100
PRK10266 PRK10266
curved DNA-binding protein;
3-108 2.10e-18

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 82.95  E-value: 2.10e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENkdEAEKKFKELSEAYEVLSDANKRSIYDRYgKEGLTGNNGGRGS 82
Cdd:PRK10266    5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEP--DAEARFKEVAEAWEVLSDEQRRAEYDQL-WQHRNDPQFNRQF 81

                          90       100
                  ....*....|....*....|....*.
gi 1250154624  83 HFHNGDHFHEQftfrNPEDVFREFFG 108
Cdd:PRK10266   82 QHGDGQSFNAE----DFDDIFSSIFG 103
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-64 5.12e-15

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 68.28  E-value: 5.12e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1250154624   1 MVDYYQVLGVRRDASADDIKKAYRKLALRWHPDK-----NPENKDEAEKKFKELSEAYEVLSDANKRSI 64
Cdd:COG1076     3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLALQKAAAINEAYETLKDPRGIDL 71
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 4-77 1.85e-12

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 67.12  E-value: 1.85e-12
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1250154624    4 YYQVLGVRRDASADDIKKAYRKLALRWHPDKNPENkdEAEKKFKELSEAYEVLSDANKRSIYDRYGKEGLTGNN 77
Cdd:PTZ00341   575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKGVN 646
djlA PRK09430
co-chaperone DjlA;
3-56 6.47e-08

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 52.51  E-value: 6.47e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1250154624   3 DYYQVLGVRRDASADDIKKAYRKLALRWHPDK------NPENKDEAEKKFKELSEAYEVL 56
Cdd:PRK09430  201 DAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvakglPPEMMEMAKEKAQEIQAAYELI 260
hscB PRK01356
co-chaperone HscB; Provisional
 1-65 1.35e-06

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 47.18  E-value: 1.35e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1250154624   1 MVDYYQVLGVRRDASAD--DIKKAYRKLALRWHPD--KNPENKDEAEKKFKELSEAYEVLSDANKRSIY 65
Cdd:PRK01356    1 MQNYFQLLGLPQEYNIDlkILEKQYFAMQVKYHPDkaKTLQEKEQNLIIASELNNAYSTLKDALKRAEY 69
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 2-66 3.81e-06

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 47.72  E-value: 3.81e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1250154624   2 VDYYQVLGV---RRDASADDIKKAYRKLALRWHPDKNPE----NKDEAekkFKELSEAYEVLSDANKRSIYD 66
Cdd:COG5269    43 VDLYALLGLskyRTKAIPPQILKAHKKKVYKYHPDKTAAggnkGCDEF---FKLIQKAREVLGDRKLRLQYD 111
PHA03102 PHA03102
Small T antigen; Reviewed
 6-58 1.10e-03

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 38.50  E-value: 1.10e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1250154624   6 QVLGVRRDASAD--DIKKAYRKLALRWHPDK--NPEnkdeaekKFKELSEAYEVLSD 58
Cdd:PHA03102    9 DLLGLPRSAWGNlpLMRKAYLRKCLEFHPDKggDEE-------KMKELNTLYKKFRE 58
PHA02624 PHA02624
large T antigen; Provisional
 6-58 3.77e-03

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 38.43  E-value: 3.77e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1250154624   6 QVLGVRRDA--SADDIKKAYRKLALRWHPDK--NPEnkdeaekKFKELSEAYEVLSD 58
Cdd:PHA02624   15 DLLGLPMAAwgNLPLMRKAYLRKCKEYHPDKggDEE-------KMKRLNSLYKKLQE 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH