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Conserved domains on  [gi|1072253279|ref|XP_018411628|]
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PREDICTED: uncharacterized protein C14orf119 homolog [Nanorana parkeri]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4508 super family cl20850
Domain of unknown function (DUF4508); This family of proteins is found in eukaryotes. Proteins ...
 13-108 4.80e-33

Domain of unknown function (DUF4508); This family of proteins is found in eukaryotes. Proteins in this family are typically between 117 and 253 amino acids in length.


The actual alignment was detected with superfamily member pfam14969:

Pssm-ID: 464413  Cd Length: 96  Bit Score: 110.83  E-value: 4.80e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072253279  13 AQEMRCVLHWFAQWTEAQRKHFLQDLLCKAVPGKLSLLLDGLGSLNLSPPPPSLFKCQIRLWDQWFQGWDEDERNEFLRR 92
Cdd:pfam14969   1 DQEMRYVLQWFQEWSELQREDFLPDLVEKAVPKKVNGLLNALANLSVQDKPPSLFQCRLKLFNQWFEKWSEEERNKFLEK 80

                          90
                  ....*....|....*.
gi 1072253279  93 LQQQEPDFVALFYKEM 108
Cdd:pfam14969  81 LEEIDPKFVEKFYQEL 96
 
Name Accession Description Interval E-value
DUF4508 pfam14969
Domain of unknown function (DUF4508); This family of proteins is found in eukaryotes. Proteins ...
 13-108 4.80e-33

Domain of unknown function (DUF4508); This family of proteins is found in eukaryotes. Proteins in this family are typically between 117 and 253 amino acids in length.


Pssm-ID: 464413  Cd Length: 96  Bit Score: 110.83  E-value: 4.80e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072253279  13 AQEMRCVLHWFAQWTEAQRKHFLQDLLCKAVPGKLSLLLDGLGSLNLSPPPPSLFKCQIRLWDQWFQGWDEDERNEFLRR 92
Cdd:pfam14969   1 DQEMRYVLQWFQEWSELQREDFLPDLVEKAVPKKVNGLLNALANLSVQDKPPSLFQCRLKLFNQWFEKWSEEERNKFLEK 80

                          90
                  ....*....|....*.
gi 1072253279  93 LQQQEPDFVALFYKEM 108
Cdd:pfam14969  81 LEEIDPKFVEKFYQEL 96
 
Name Accession Description Interval E-value
DUF4508 pfam14969
Domain of unknown function (DUF4508); This family of proteins is found in eukaryotes. Proteins ...
 13-108 4.80e-33

Domain of unknown function (DUF4508); This family of proteins is found in eukaryotes. Proteins in this family are typically between 117 and 253 amino acids in length.


Pssm-ID: 464413  Cd Length: 96  Bit Score: 110.83  E-value: 4.80e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1072253279  13 AQEMRCVLHWFAQWTEAQRKHFLQDLLCKAVPGKLSLLLDGLGSLNLSPPPPSLFKCQIRLWDQWFQGWDEDERNEFLRR 92
Cdd:pfam14969   1 DQEMRYVLQWFQEWSELQREDFLPDLVEKAVPKKVNGLLNALANLSVQDKPPSLFQCRLKLFNQWFEKWSEEERNKFLEK 80

                          90
                  ....*....|....*.
gi 1072253279  93 LQQQEPDFVALFYKEM 108
Cdd:pfam14969  81 LEEIDPKFVEKFYQEL 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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