|
Name |
Accession |
Description |
Interval |
E-value |
| Filament |
pfam00038 |
Intermediate filament protein; |
11-318 |
8.76e-24 |
|
Intermediate filament protein;
Pssm-ID: 459643 [Multi-domain] Cd Length: 313 Bit Score: 103.46 E-value: 8.76e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 11 EKAELQELNARLYDYVCRVRELERENLLLEEELRGRRGREGLWAEGQARCAE-EARSLRQQLDELSWATALAEGERDALR 89
Cdd:pfam00038 2 EKEQLQELNDRLASYIDKVRFLEQQNKLLETKISELRQKKGAEPSRLYSLYEkEIEDLRRQLDTLTVERARLQLELDNLR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 90 RELRELQRLDAEERAARGRLDAELGAQQRELQEALGARAALEALLGRLQAERRGLDAAHERDVRELRARAASLTMHFRAR 169
Cdd:pfam00038 82 LAAEDFRQKYEDELNLRTSAENDLVGLRKDLDEATLARVDLEAKIESLKEELAFLKKNHEEEVRELQAQVSDTQVNVEMD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 170 AtgpaAPPPRL----REVHDSYALLVAESWRETVQLYEDEVRELEEALRRGQESRLQAEEETRLCAQEAEALRREALGLE 245
Cdd:pfam00038 162 A----ARKLDLtsalAEIRAQYEEIAAKNREEAEEWYQSKLEELQQAAARNGDALRSAKEEITELRRTIQSLEIELQSLK 237
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034590149 246 QLRARLEDALLRMREEYGIQAEERQRVIDCLEDEKATLTLAMADWLRDYQDLLQVKTGLSLEVATYRALLEGE 318
Cdd:pfam00038 238 KQKASLERQLAETEERYELQLADYQELISELEAELQETRQEMARQLREYQELLNVKLALDIEIATYRKLLEGE 310
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
55-316 |
3.69e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 67.65 E-value: 3.69e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 55 EGQARCAEEARSLRQQLDELSWATALAEgeRDALRRELRELQRLDAEERAARGRLDAELGAQQRELQEALGARAALEALL 134
Cdd:COG1196 206 ERQAEKAERYRELKEELKELEAELLLLK--LRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELEL 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 135 GRLQAERRGLDAAHERDVRELRARAASLTmhfRARAtgpaapppRLREvhdsyALLVAESWRETVQLYEDEVRELEEALR 214
Cdd:COG1196 284 EEAQAEEYELLAELARLEQDIARLEERRR---ELEE--------RLEE-----LEEELAELEEELEELEEELEELEEELE 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 215 RGQESRLQAEEETRLCAQEAEALRREALGLEQLRARLEDALLRMREEygiQAEERQRVIDcLEDEKATLTLAMADWLRDY 294
Cdd:COG1196 348 EAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA---AAELAAQLEE-LEEAEEALLERLERLEEEL 423
|
250 260
....*....|....*....|..
gi 1034590149 295 QDLLQVKTGLSLEVATYRALLE 316
Cdd:COG1196 424 EELEEALAELEEEEEEEEEALE 445
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
57-317 |
3.68e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.57 E-value: 3.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 57 QARCAEEARSLRQQLDELSWATALAEGERDALRRELRELQRLDAEERAARGRLDAELGAQQRELQEALGARAALEALLGR 136
Cdd:COG1196 262 LAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEE 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 137 LQAERRGLDAAHERDVRELRARAASLTMHFRARAtgpaappPRLREVHDSYALLVAEswRETVQLYEDEVRELEEALRRG 216
Cdd:COG1196 342 LEEELEEAEEELEEAEAELAEAEEALLEAEAELA-------EAEEELEELAEELLEA--LRAAAELAAQLEELEEAEEAL 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 217 QESRLQAEEETrlcAQEAEALRREALGLEQLRARLEDALLRMREEYGIQAEERQRVIDcLEDEKATLTLAMADWLRDYQD 296
Cdd:COG1196 413 LERLERLEEEL---EELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAE-LLEEAALLEAALAELLEELAE 488
|
250 260
....*....|....*....|.
gi 1034590149 297 LLQVKTGLSLEVATYRALLEG 317
Cdd:COG1196 489 AAARLLLLLEAEADYEGFLEG 509
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
11-271 |
1.44e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 62.65 E-value: 1.44e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 11 EKAELQELNARLYdyvcrvrelerenllleeelrGRRGREGLWAEGQARCAEEARSLRQQLDELSWATALAEGERDALRR 90
Cdd:COG1196 279 LELELEEAQAEEY---------------------ELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEE 337
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 91 ELRELQRLDAEERAARGRLDAELGAQQRELQEALGARAALEALLGRLQAERrgldAAHERDVRELRARAASLTMHFRARA 170
Cdd:COG1196 338 ELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEEL----LEALRAAAELAAQLEELEEAEEALL 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 171 tgpaapppRLREVHDSYallvAESWRETVQLYEDEVRELEEALRRGQESRLQAEEETRLCAQEAEALRREALGLEQLRAR 250
Cdd:COG1196 414 --------ERLERLEEE----LEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAE 481
|
250 260
....*....|....*....|.
gi 1034590149 251 LEDALLRMREEYGIQAEERQR 271
Cdd:COG1196 482 LLEELAEAAARLLLLLEAEAD 502
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
63-297 |
3.28e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 61.61 E-value: 3.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 63 EARSLRQQLDELSWATALAEGERDALRRELRELQRLDAEERAARGRLDAELGAQQRELQEALGARAALEALLGRLQAERR 142
Cdd:TIGR02168 678 EIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELT 757
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 143 GLDAAHErdvrELRARAASLTMHFRARATGPAAPPPRLREVHDSyallvAESWRETVQLYEDEVRELEEALRRGQESRLQ 222
Cdd:TIGR02168 758 ELEAEIE----ELEERLEEAEEELAEAEAEIEELEAQIEQLKEE-----LKALREALDELRAELTLLNEEAANLRERLES 828
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1034590149 223 AEEETRLCAQEAEALRREALGLEQLRARLEDALlrmrEEYGIQAEERQRVIDCLEDEKATLTLAMADWLRDYQDL 297
Cdd:TIGR02168 829 LERRIAATERRLEDLEEQIEELSEDIESLAAEI----EELEELIEELESELEALLNERASLEEALALLRSELEEL 899
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
62-261 |
6.85e-09 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 60.31 E-value: 6.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 62 EEARSLRQQLDELSWATALAEgERDALRRELRELQRLDA-----EERAARGRLDAELGAQQRELQEALGARAALEALLGR 136
Cdd:COG4913 242 EALEDAREQIELLEPIRELAE-RYAAARERLAELEYLRAalrlwFAQRRLELLEAELEELRAELARLEAELERLEARLDA 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 137 LQAERRGLDAAHE----RDVRELRARAASLTmhfRARAtgpaapppRLREVHDSYALLV----------AESWRETVQLY 202
Cdd:COG4913 321 LREELDELEAQIRgnggDRLEQLEREIERLE---RELE--------ERERRRARLEALLaalglplpasAEEFAALRAEA 389
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1034590149 203 EDEVRELEEALRRGQESRLQAEEETRLCAQEAEALRREALGLEQLRARLEDALLRMREE 261
Cdd:COG4913 390 AALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDA 448
|
|
| COG3903 |
COG3903 |
Predicted ATPase [General function prediction only]; |
49-318 |
3.75e-08 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443109 [Multi-domain] Cd Length: 933 Bit Score: 58.11 E-value: 3.75e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 49 REGLWAE--------GQARCAEEARSLRQQLDELSWATALAEGERDALRRELRELQRLDAEERAARGRLDAELGAQQREL 120
Cdd:COG3903 563 EGRRWLEralaaageAAAALAAAAALAAAAAAARAAAAAAAAAAAAAAAAAAAAAAAAAALLLLAALAAAAAAAAAAAAA 642
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 121 QEALGARAALEALLGRLQAERRGLDAAHERDVRELRARAASLTMHFRARATGPAAPPPRLREVHDSYALLVAESWRETVQ 200
Cdd:COG3903 643 AAAAAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAAALAAAAAALAAAAAAAALAAAAAAALAAAAAAAAAAA 722
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 201 LYEDEVRELEEALRRGQESRLQAEEETRLCAQEAEALRREALGLEQLRARLEDALLRMREEYGIQAEERQRVIDCLEDEK 280
Cdd:COG3903 723 AAAALLAAAAAAALAAAAAAAALALAAAAAAAAAAAAAAALAAAAAAAALAALLLALAAAAAALAAAAAAAAAAAAAAAA 802
|
250 260 270
....*....|....*....|....*....|....*...
gi 1034590149 281 ATLTLAMADWLRDYQDLLQVKTGLSLEVATYRALLEGE 318
Cdd:COG3903 803 AAAAAAAAAAAAALAAAAAAAAAAAAALAAALAAAAAA 840
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
57-283 |
3.79e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 58.14 E-value: 3.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 57 QARCAEEARSLRQQLDELSWATAL-------------------AEGERDALRRELRELQRLDAEERAARGRLDAELGAQQ 117
Cdd:TIGR02168 208 QAEKAERYKELKAELRELELALLVlrleelreeleelqeelkeAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQ 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 118 RELQEALGARAALEALLGRLQAERRGLDAAHER-------------------------------DVRELRARAASLTMHF 166
Cdd:TIGR02168 288 KELYALANEISRLEQQKQILRERLANLERQLEEleaqleeleskldelaeelaeleekleelkeELESLEAELEELEAEL 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 167 RARATGPAAPPPRLREVHDSYALLV--AESWRETVQLYEDEVRELEEalRRGQESRLQAEEETRLCAQEAEALRREALGL 244
Cdd:TIGR02168 368 EELESRLEELEEQLETLRSKVAQLElqIASLNNEIERLEARLERLED--RRERLQQEIEELLKKLEEAELKELQAELEEL 445
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1034590149 245 EQLRARLEDALLRMREEYGIQAEER---QRVIDCLEDEKATL 283
Cdd:TIGR02168 446 EEELEELQEELERLEEALEELREELeeaEQALDAAERELAQL 487
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
54-319 |
3.26e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.00 E-value: 3.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 54 AEGQARCAEEARSLRQQLDELSWATALAEGERDALRRELRELQRldaeeraargrldaELGAQQRELQEALGARAALEAL 133
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALER--------------RIAALARRIRALEQELAALEAE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 134 LGRLQAERRGLDAAHERDVRELRARAASLTMHFRaratgpaAPPPRLrevhdsyaLLVAESWRETV---QLYEDEVRELE 210
Cdd:COG4942 85 LAELEKEIAELRAELEAQKEELAELLRALYRLGR-------QPPLAL--------LLSPEDFLDAVrrlQYLKYLAPARR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 211 EALRRGQESRLQAEEETRLCAQEAEALRREALGLEQLRARLEDALlrmreeygiqaEERQRVIDCLEDEKATLTLAMADW 290
Cdd:COG4942 150 EQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALK-----------AERQKLLARLEKELAELAAELAEL 218
|
250 260
....*....|....*....|....*....
gi 1034590149 291 LRDYQDLLQVKTGLSLEVATYRALLEGES 319
Cdd:COG4942 219 QQEAEELEALIARLEAEAAAAAERTPAAG 247
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
54-336 |
1.81e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 52.25 E-value: 1.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 54 AEGQARCAEEARSLRQQLDELSWATALAEGERDALRREL-RELQRLDAEERAA-------RGRLDAELGAQQRELQEALG 125
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELaEAAARLLLLLEAEadyegflEGVKAALLLAGLRGLAGAVA 527
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 126 ARAALEALLGRLQAERRGLDAAH--ERDVRELRARAASLTMHFRARAT---------GPAAPPPRLREVHDSYALLVAES 194
Cdd:COG1196 528 VLIGVEAAYEAALEAALAAALQNivVEDDEVAAAAIEYLKAAKAGRATflpldkiraRAALAAALARGAIGAAVDLVASD 607
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 195 WRE----------TVQLYEDEVRELEEALRRGQESRLQAEEETRLCAQEAEALRREALGLEQLRARLEDALLRMREEYGI 264
Cdd:COG1196 608 LREadaryyvlgdTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAER 687
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1034590149 265 QAEERQRVID---CLEDEKATLTLAMADWLRDYQDLLQVKTGLSLEVATYRALLEGESNPEIVIWAEHVENMPSE 336
Cdd:COG1196 688 LAEEELELEEallAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDL 762
|
|
| COG3903 |
COG3903 |
Predicted ATPase [General function prediction only]; |
53-318 |
3.28e-06 |
|
Predicted ATPase [General function prediction only];
Pssm-ID: 443109 [Multi-domain] Cd Length: 933 Bit Score: 51.56 E-value: 3.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 53 WAEGQARCAEEARSLRQQLDELSWATALAEGERDALRRELRELQRLDAEERAA--------RGRLDAELGAQQRELQEAL 124
Cdd:COG3903 497 YYLALAERAAAELRGPDQLAWLARLDAEHDNLRAALRWALAHGDAELALRLAAalapfwflRGLLREGRRWLERALAAAG 576
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 125 GARAALEALLGRLQAERRGLDAAHERDVRELRARAASLTMHFRARATGPAAPPPRLREVHDSYALLVAESWRETVQLYED 204
Cdd:COG3903 577 EAAAALAAAAALAAAAAAARAAAAAAAAAAAAAAAAAAAAAAAAAALLLLAALAAAAAAAAAAAAAAAAAAAAAAAAAAA 656
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 205 EVRELEEALRRGQESRLQAEEETRLCAQEAEALRREALGLEQLRARLEDALLRMREEYGIQAEERQRVIDCLEDEKATLT 284
Cdd:COG3903 657 AAAAAAAAALAAAAAAAAAAAAAAAAAAAALAAAAAALAAAAAAAALAAAAAAALAAAAAAAAAAAAAAALLAAAAAAAL 736
|
250 260 270
....*....|....*....|....*....|....
gi 1034590149 285 LAMADWLRDYQDLLQVKTGLSLEVATYRALLEGE 318
Cdd:COG3903 737 AAAAAAAALALAAAAAAAAAAAAAAALAAAAAAA 770
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
85-299 |
4.14e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.45 E-value: 4.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 85 RDALRRELRELQRLDAEERAARGRLDAELgAQQRELQEALGAR----------AALEALLGRLQAERRGLDAAHErDVRE 154
Cdd:COG4913 612 LAALEAELAELEEELAEAEERLEALEAEL-DALQERREALQRLaeyswdeidvASAEREIAELEAELERLDASSD-DLAA 689
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 155 LRARAAsltmhfRARAtgpaapppRLREVHDSYALLVAESWR--ETVQLYEDEVRELEEALRRGqESRLQAEEETRLCAQ 232
Cdd:COG4913 690 LEEQLE------ELEA--------ELEELEEELDELKGEIGRleKELEQAEEELDELQDRLEAA-EDLARLELRALLEER 754
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034590149 233 EAEALRREAlgLEQLRARLEDALLRMREEygiQAEERQRVIDCLEDEKATLTLAMADW------LRDYQDLLQ 299
Cdd:COG4913 755 FAAALGDAV--ERELRENLEERIDALRAR---LNRAEEELERAMRAFNREWPAETADLdadlesLPEYLALLD 822
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
89-269 |
6.38e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.68 E-value: 6.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 89 RRELRELQRLDAEERAARGRLDAELGAQQRELQEALGARAALEALLGRLQAERRGLDAAHERDVRELRARAASLtmhfra 168
Cdd:COG4913 595 RRRIRSRYVLGFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAER------ 668
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 169 ratgpaapppRLREVHDSYALLVAESwrETVQLYEDEVRELEEALRRGQESRLQAEEETRLCAQEAEALRREalgLEQLR 248
Cdd:COG4913 669 ----------EIAELEAELERLDASS--DDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEE---LDELQ 733
|
170 180
....*....|....*....|.
gi 1034590149 249 ARLEDALLRMREEYGIQAEER 269
Cdd:COG4913 734 DRLEAAEDLARLELRALLEER 754
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
12-279 |
7.52e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 50.44 E-value: 7.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 12 KAELQELNARLYDYVCRVRELERENLLLEEELRGRRGREGLWAEGQARCAEEARSLRQQLDELSWATALAEGERDALRRE 91
Cdd:TIGR02168 704 RKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAE 783
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 92 LRELQRLDAEERAARGRLDAELGAQQRELQ----EALGARAALEALLGRLQAERRGLDAAHERdVRELRARAASLTmHFR 167
Cdd:TIGR02168 784 IEELEAQIEQLKEELKALREALDELRAELTllneEAANLRERLESLERRIAATERRLEDLEEQ-IEELSEDIESLA-AEI 861
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 168 ARATgpaAPPPRLREVHDSyALLVAESWRETVQLYEDEVRELEEALRRGQESRLQAEEETRLCAQEAEALRREALGLEQL 247
Cdd:TIGR02168 862 EELE---ELIEELESELEA-LLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVR 937
|
250 260 270
....*....|....*....|....*....|..
gi 1034590149 248 RARLEDALlrmREEYGIQAEERQRVIDCLEDE 279
Cdd:TIGR02168 938 IDNLQERL---SEEYSLTLEEAEALENKIEDD 966
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
58-283 |
1.02e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.07 E-value: 1.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 58 ARCAEEARSLRQQLDELSWATALAEGErdaLRRELRELQRLDAEERAARGRLdAELGAQQRELQEalgARAALEALLGRL 137
Cdd:TIGR02169 691 SSLQSELRRIENRLDELSQELSDASRK---IGEIEKEIEQLEQEEEKLKERL-EELEEDLSSLEQ---EIENVKSELKEL 763
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 138 QAERrgldAAHERDVRELRARAASLTMHFRaratgpaapPPRLREVHDSYallvaESWRETVQLYEDEVRELEEALRRGQ 217
Cdd:TIGR02169 764 EARI----EELEEDLHKLEEALNDLEARLS---------HSRIPEIQAEL-----SKLEEEVSRIEARLREIEQKLNRLT 825
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1034590149 218 ESRLQAEEETrlcaQEAEALRREALGLEQLRARLEDALLRMREEYGIQAEERQRVIDCLEDEKATL 283
Cdd:TIGR02169 826 LEKEYLEKEI----QELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDL 887
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
5-253 |
1.34e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 49.67 E-value: 1.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 5 RLQTGPEKAELQELNARLYDYVCRVRELERENLLLEEELRGRRGREGLWAEGQARCAEEARSLRQQLDELSWATALAEGE 84
Cdd:TIGR02168 273 RLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEE 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 85 RDALRRELRELQRLDAEERAARGRLDAELGAQQRELQEALGARAALEALLGRLQAERRGLDAAHERDVRELRARAASLTm 164
Cdd:TIGR02168 353 LESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLE- 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 165 hfraratgpaapPPRLREVHDSyallVAESWRETVQLYEdEVRELEEALRRGQESRLQAEEETRLCAQEAEALRREALGL 244
Cdd:TIGR02168 432 ------------EAELKELQAE----LEELEEELEELQE-ELERLEEALEELREELEEAEQALDAAERELAQLQARLDSL 494
|
....*....
gi 1034590149 245 EQLRARLED 253
Cdd:TIGR02168 495 ERLQENLEG 503
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
58-261 |
2.11e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.14 E-value: 2.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 58 ARCAEEARSLRQQLDEL----SWATALAEgERDALRRELRELQRLDAEERAARGRLDAELGA---QQRELQEALGARAAL 130
Cdd:COG4913 664 ASAEREIAELEAELERLdassDDLAALEE-QLEELEAELEELEEELDELKGEIGRLEKELEQaeeELDELQDRLEAAEDL 742
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 131 EALLGRLQAERRGLDAAHERDVRELRARAASLTMHFRARATGPAApppRLREVHDSYallvAESWRETVQLYEDEVRELE 210
Cdd:COG4913 743 ARLELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEE---ELERAMRAF----NREWPAETADLDADLESLP 815
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1034590149 211 EALRRGQesRLQAEEETRLCAQEAEALRREALG-LEQLRARLEDALLRMREE 261
Cdd:COG4913 816 EYLALLD--RLEEDGLPEYEERFKELLNENSIEfVADLLSKLRRAIREIKER 865
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
11-316 |
2.28e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 48.78 E-value: 2.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 11 EKAELQELNARLydyvcrvrELERENLLLEEELRGRRGREGLWAEGQARCAEEARSLRQQLDELSWATALAEGERDALRR 90
Cdd:COG1196 450 EEAELEEEEEAL--------LELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRG 521
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 91 ELRELQRLDAEERAARGRLDAELGA--QQRELQEALGARAALEALLGRLQAERRGLDAAHERDVRELRARAASLTMHFRA 168
Cdd:COG1196 522 LAGAVAVLIGVEAAYEAALEAALAAalQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAV 601
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 169 RATGPAAPPPRLREVHDSYALLVAESW-----------RETVQLYEDEVRELEEALRRGQESRLQAEEETRLCAQEAEAL 237
Cdd:COG1196 602 DLVASDLREADARYYVLGDTLLGRTLVaarleaalrraVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAEL 681
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1034590149 238 RREALGLEQLRARLEDALLRMREEYGIQAEERQRVIDcLEDEKATLTLAMADWLRDYQDLLQVKTGLSLEVATYRALLE 316
Cdd:COG1196 682 EELAERLAEEELELEEALLAEEEEERELAEAEEERLE-EELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEP 759
|
|
| FUSC |
pfam04632 |
Fusaric acid resistance protein family; This family includes a conserved region found in two ... |
53-161 |
3.01e-05 |
|
Fusaric acid resistance protein family; This family includes a conserved region found in two proteins associated with fusaric acid resistance, from Burkholderia cepacia and Klebsiella oxytoca. These proteins are likely to be membrane transporter proteins.
Pssm-ID: 428044 [Multi-domain] Cd Length: 655 Bit Score: 48.43 E-value: 3.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 53 WAEGQARCAEEARSLRQQLDEL-SWATALAE----GERDALRRELRELQRLDAEERAARGRLDAELGAqqrELQEALGAR 127
Cdd:pfam04632 241 LARLRTEGAGTVPELAALLDELaAWEAALAAealqAALAALRARLRALRPALPLDFDTAAELLARLAD---LLAELAEAL 317
|
90 100 110
....*....|....*....|....*....|....
gi 1034590149 128 AALEALLGRLQAERRGLDAAHERDVRELRARAAS 161
Cdd:pfam04632 318 ASCRALRHPIAQGARPARLARHRDHGAALLNGLR 351
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
90-304 |
3.48e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 46.46 E-value: 3.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 90 RELRELQRLDAEE---RAARGRLDAELGAQQRELQEALGARAALEALLGRLQAERRGLdaahERDVRELRARAAsltmhf 166
Cdd:COG1579 7 RALLDLQELDSELdrlEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRL----ELEIEEVEARIK------ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 167 RARAtgpaapppRLREVHDSyallvaeswREtvqlYEDEVRELEEALRRgqesRLQAEEETRLCAQEAEALRREALGLEQ 246
Cdd:COG1579 77 KYEE--------QLGNVRNN---------KE----YEALQKEIESLKRR----ISDLEDEILELMERIEELEEELAELEA 131
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1034590149 247 LRARLEDALLRMREEYGIQAEERQRVIDCLEDEKATLTLAM-ADWLRDYQDLLQVKTGL 304
Cdd:COG1579 132 ELAELEAELEEKKAELDEELAELEAELEELEAEREELAAKIpPELLALYERIRKRKNGL 190
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
64-177 |
3.60e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 3.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 64 ARSLRQQLDELSWATALAEGERDALRRELRELQRLDAEERAARGRLDAELGAQQRELQEALGARAALEALLGRLQAERRG 143
Cdd:COG4942 145 APARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEE 224
|
90 100 110
....*....|....*....|....*....|....
gi 1034590149 144 LDAAHERDVRELRARAASLTMHFRARATGPAAPP 177
Cdd:COG4942 225 LEALIARLEAEAAAAAERTPAAGFAALKGKLPWP 258
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
69-256 |
7.61e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.07 E-value: 7.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 69 QQLDELSWATALAEGERDALRRELRELQRLDAEERAARGRLdAELGAQQRELQEALGARAA---LEALLGRLQAERRGLD 145
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAEL-EELREELEKLEKLLQLLPLyqeLEALEAELAELPERLE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 146 AAHERdVRELRARAASLTMHFRARAtgpaapppRLREVHDSYALLVAESWRETVQLYEDEVRELEEALRRGQESRLQAEE 225
Cdd:COG4717 150 ELEER-LEELRELEEELEELEAELA--------ELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQE 220
|
170 180 190
....*....|....*....|....*....|.
gi 1034590149 226 ETRLCAQEAEALRREALgLEQLRARLEDALL 256
Cdd:COG4717 221 ELEELEEELEQLENELE-AAALEERLKEARL 250
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
66-162 |
8.14e-05 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 46.11 E-value: 8.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 66 SLRQQLDELSWATALAEGERDALRRELRELQRL--DAEERAarGRLDAELGAQQRELQEALGARAAL----EALLGRLQA 139
Cdd:PRK09039 78 DLQDSVANLRASLSAAEAERSRLQALLAELAGAgaAAEGRA--GELAQELDSEKQVSARALAQVELLnqqiAALRRQLAA 155
|
90 100
....*....|....*....|...
gi 1034590149 140 ERRGLDAAHERDvRELRARAASL 162
Cdd:PRK09039 156 LEAALDASEKRD-RESQAKIADL 177
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1-283 |
8.72e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.68 E-value: 8.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 1 MLSWRLQTGPEKAELQELNARLYDYVCRVrelerenllleEELRGRRGREGLWAEGQARCAEEARSLRQQLDELswATAL 80
Cdd:COG4717 120 KLEKLLQLLPLYQELEALEAELAELPERL-----------EELEERLEELRELEEELEELEAELAELQEELEEL--LEQL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 81 AEGERDALRRELRELQRLDAEERAARgrldAELGAQQRELQEALGARAALEALLGRLQAERRgLDAAherdvrELRARAA 160
Cdd:COG4717 187 SLATEEELQDLAEELEELQQRLAELE----EELEEAQEELEELEEELEQLENELEAAALEER-LKEA------RLLLLIA 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 161 SLTMHFRARATGPAAPPPRLREVHDSYALLVAESWRETVQLYEDEVRELEEALRRGQESRLQAEEETRLCAQEAEALRRE 240
Cdd:COG4717 256 AALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLS 335
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1034590149 241 ALGLEQLRARLEDALLRMREeygIQAEERQRVIDCLEDEKATL 283
Cdd:COG4717 336 PEELLELLDRIEELQELLRE---AEELEEELQLEELEQEIAAL 375
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
62-273 |
1.16e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 46.60 E-value: 1.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 62 EEARSLRQQLDELSWATALAEGERDALRRELRELQRLDAEERAARGRLDAELGAQQRELQEALGARAALEALLGRLQAER 141
Cdd:TIGR02169 287 EEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEEL 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 142 RGLdaahERDVRELRARAASLTMHFRARATGPAAPPPRLREVHDSYALLVAESWRETVQL---------YEDEVRELEEA 212
Cdd:TIGR02169 367 EDL----RAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELadlnaaiagIEAKINELEEE 442
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1034590149 213 LRRGQESRLQAEEETRLCAQEAEALRREALGLEQLRARLEDALLRMREEYgIQAEERQRVI 273
Cdd:TIGR02169 443 KEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQREL-AEAEAQARAS 502
|
|
| COG4995 |
COG4995 |
Uncharacterized conserved protein, contains CHAT domain [Function unknown]; |
54-316 |
2.46e-04 |
|
Uncharacterized conserved protein, contains CHAT domain [Function unknown];
Pssm-ID: 444019 [Multi-domain] Cd Length: 711 Bit Score: 45.34 E-value: 2.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 54 AEGQARCAEEARSLRQQLDELSWATALAEGERDALRRELRELQRLDAEERAARGRLDAELGAQQRELQEALGARAALEAL 133
Cdd:COG4995 189 AALAAAAAALALLLALLLLAALAAALAAALAALLLALLALAAALLALLLLALLALAAAAAALAAAAAALLALAAALLLLA 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 134 LGRLQAERRGLDAAHERDVRELRARAASLTMHFRARATGPAAPPPRLREVHDSYALLVAESWRETVQLYEDEVRELEEAL 213
Cdd:COG4995 269 ALAALAAAAAAAALAALALAAALALAAAALALALLLAAAAAAALAALALLLLAALLLLLAALALLALLLLLAAAALLAAA 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 214 RRGQESRLQAEEETRLCAQEAEALRREALGLEQLRARLEDALLRMREEYGIQAEERQRVIDCLEDEKATLTLAMADWLRD 293
Cdd:COG4995 349 LAAALALAAALALALLAALLLLLAALLALLLEALLLLLLALLAALLLLAAALLALAAAQLLRLLLAALALLLALAAYAAA 428
|
250 260
....*....|....*....|....*....
gi 1034590149 294 YQDLLQ------VKTGLSLEVATYRALLE 316
Cdd:COG4995 429 RLALLAlieyiiLPDRLYAFVQLYQLLIA 457
|
|
| CHAD |
smart00880 |
The CHAD domain is an alpha-helical domain functionally associated with some members of the ... |
65-214 |
3.37e-04 |
|
The CHAD domain is an alpha-helical domain functionally associated with some members of the adenylate cyclase family; It has conserved histidines that may chelate metals.
Pssm-ID: 214880 [Multi-domain] Cd Length: 262 Bit Score: 43.92 E-value: 3.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 65 RSLRQQLDELswataLAEGERDALRRELRELQRLDAEERAargrLDAELGAQQRELQEALGARAALEALLGRLQAERrgl 144
Cdd:smart00880 36 RSALRLFRPV-----LPREAAAALRAELRWLARELGPLRD----LDVLLERLLELLAALLPELPALDALVAALEARR--- 103
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1034590149 145 DAAHERDVRELRARAASLTMH-----FRARATGPAAPPPRLREVHDSYALLVAESWRETVQLYEDEVRELEEALR 214
Cdd:smart00880 104 AAARRALLAALDSARYTALLLdlsrwLATPPWQPAADDKAARPLADFAAKALRRLLRKLRRAFPAARALLDDEAL 178
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
45-262 |
3.41e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 45.05 E-value: 3.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 45 GRRGREGLWAEGQARCAEEARSLRQQLDELSWATALAEGERDALRRELRELQRLDAEERAARGRLDAELGAQQRELQEAL 124
Cdd:TIGR02168 285 ELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELE 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 125 GARAALEALLGRLQAERRGLdaahERDVRELRARAASLTMHF---RARATGPAAPPPRLREVHDSYALLVAESWRETVQL 201
Cdd:TIGR02168 365 AELEELESRLEELEEQLETL----RSKVAQLELQIASLNNEIerlEARLERLEDRRERLQQEIEELLKKLEEAELKELQA 440
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1034590149 202 YEDEVRELEEALRRGQESRLQAEEETRLCAQEAEALRREALG-LEQLRARLeDALLRMREEY 262
Cdd:TIGR02168 441 ELEELEEELEELQEELERLEEALEELREELEEAEQALDAAEReLAQLQARL-DSLERLQENL 501
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
62-313 |
3.68e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 3.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 62 EEARSLRQQLDELSWATALAEGERDALRReLRELQRLDAEERAARGRLDA-ELGAQQRELQEALGARAALEALLGRLQAE 140
Cdd:COG4913 225 EAADALVEHFDDLERAHEALEDAREQIEL-LEPIRELAERYAAARERLAElEYLRAALRLWFAQRRLELLEAELEELRAE 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 141 RRGLDAAherdVRELRARAASLtmhfraratgpaappprlrevhdsyallvaeswretvqlyEDEVRELEEALRR---GQ 217
Cdd:COG4913 304 LARLEAE----LERLEARLDAL----------------------------------------REELDELEAQIRGnggDR 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 218 ESRLQAEEETRlcAQEAEALRREALGLEQLRARLEDALLRMREEYGIQAEERQRVIDCLEDEKATLTLAMADWLRDYQDL 297
Cdd:COG4913 340 LEQLEREIERL--ERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDL 417
|
250
....*....|....*.
gi 1034590149 298 LQVKTGLSLEVATYRA 313
Cdd:COG4913 418 RRELRELEAEIASLER 433
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
62-260 |
8.27e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 43.88 E-value: 8.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 62 EEARSLRQQLDELSWATALAEGERDALRRELREL--QRLDAEERAARGRLDAELGAQQrelQEALGARaaLEALLGRLQA 139
Cdd:PRK02224 251 EELETLEAEIEDLRETIAETEREREELAEEVRDLreRLEELEEERDDLLAEAGLDDAD---AEAVEAR--REELEDRDEE 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 140 ERRGLD------AAHERDVRELRARAASLtmhfRARATGPAAPPPRLREVHDSYALLVAESwRETVQLYEDEVRELEEAL 213
Cdd:PRK02224 326 LRDRLEecrvaaQAHNEEAESLREDADDL----EERAEELREEAAELESELEEAREAVEDR-REEIEELEEEIEELRERF 400
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1034590149 214 RRGQESRLQAEEETRLCAQEAEALRREalgLEQLRARLEDALLRMRE 260
Cdd:PRK02224 401 GDAPVDLGNAEDFLEELREERDELRER---EAELEATLRTARERVEE 444
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
85-289 |
8.64e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.60 E-value: 8.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 85 RDALRRELRELQRLDAEERAargRLDAELGAQQRELQEALGARAALEALLGRLQAERRGLDAAhERDVRELRARAASLTm 164
Cdd:COG4717 48 LERLEKEADELFKPQGRKPE---LNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEEL-EAELEELREELEKLE- 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 165 hfraratgpaapppRLREVHDSYallvaESWRETVQLYEDEVRELEEALRRGQESRLQAEEETRLCAQEAEALRREALGL 244
Cdd:COG4717 123 --------------KLLQLLPLY-----QELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELL 183
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1034590149 245 EQLRARLEDALLRMREEYGIQAEERQRVIDCLEDEKATLTLAMAD 289
Cdd:COG4717 184 EQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEE 228
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
57-163 |
1.06e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.37 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 57 QARCAEEARSLRQQLDELSWAtalAEGERDALRRELRELQRLDAEERAARGRLDAELGAQQRELQEALGARAALEALLGR 136
Cdd:COG4913 354 LEERERRRARLEALLAALGLP---LPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIAS 430
|
90 100
....*....|....*....|....*..
gi 1034590149 137 LQAeRRGLDAAHERDVRELRARAASLT 163
Cdd:COG4913 431 LER-RKSNIPARLLALRDALAEALGLD 456
|
|
| HepA |
COG0553 |
Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination, ... |
53-295 |
1.09e-03 |
|
Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination, and repair];
Pssm-ID: 440319 [Multi-domain] Cd Length: 682 Bit Score: 43.29 E-value: 1.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 53 WAEGQARCAEEARSLRQQLDELSWATALAEGERDALRRELRELQRLDAEERAARGRLDAELGAQQRELQEALGARAALEA 132
Cdd:COG0553 2 LLLLLLLALGALGLLLTELLLLLRLGALLLELVLARELLLLLLAADALLLLALLLLLELLLLLAALLLLALLLLALSALA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 133 LLGRLQAERRGLDAAHERDVRELRARAASLTMHFRARATGPAAPPPRLREVHDSYALLVAESWRETVQLYEDEVRELEEA 212
Cdd:COG0553 82 LLLLRLLLALLLLALLLLLAGLLALALLLLALLGLLLSLALLLLLLLLLLLLLLALLLVLLAALLLLLLLLLLLALLLGR 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 213 LRRGQESRLQAEEETRLCAQEAEALRREALGLEQLRARLEDALLRMREEYGIQAEERQR--VIDCLEDEKATLTLAMADW 290
Cdd:COG0553 162 LLLLALLLLALEALLLLGLLLALALLALLELALLAAEAELLLLLELLLELELLAEAAVDafRLRRLREALESLPAGLKAT 241
|
....*
gi 1034590149 291 LRDYQ 295
Cdd:COG0553 242 LRPYQ 246
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
57-282 |
1.11e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 43.40 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 57 QARCA-EEARSLrQQLDELSWATAlaEGERDALRRELREL--QRLDAEERAArgrlDAELGAQQRElqEALgarAALEAL 133
Cdd:COG3096 417 QAVQAlEKARAL-CGLPDLTPENA--EDYLAAFRAKEQQAteEVLELEQKLS----VADAARRQFE--KAY---ELVCKI 484
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 134 LGRLQAERRGlDAAHE--RDVRELRARAASLTmHFRARAtgpAAPPPRLREVHDSYALLVAESWRETVQLyeDEVRELEE 211
Cdd:COG3096 485 AGEVERSQAW-QTAREllRRYRSQQALAQRLQ-QLRAQL---AELEQRLRQQQNAERLLEEFCQRIGQQL--DAAEELEE 557
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 212 ALRRGQESRLQAEEETRLCAQEAEALRREalgLEQLRAR-------------LEDALLRMREEYGIQAEERQRVIDC--- 275
Cdd:COG3096 558 LLAELEAQLEELEEQAAEAVEQRSELRQQ---LEQLRARikelaarapawlaAQDALERLREQSGEALADSQEVTAAmqq 634
|
....*...
gi 1034590149 276 -LEDEKAT 282
Cdd:COG3096 635 lLEREREA 642
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
59-282 |
1.49e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.80 E-value: 1.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 59 RCAEEARSLRQQLDELSwATALAEGERDALRRElRELQRLDAEERAARgrldaelgaQQRELQEALGARAALEALLGRLQ 138
Cdd:pfam17380 316 RKLEEAEKARQAEMDRQ-AAIYAEQERMAMERE-RELERIRQEERKRE---------LERIRQEEIAMEISRMRELERLQ 384
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 139 AERRgldAAHERDVRELRA-RAASLTMHFRARATgpaapPPRLREVHDSYALLVAESWRETVQLYEDEVRELE-----EA 212
Cdd:pfam17380 385 MERQ---QKNERVRQELEAaRKVKILEEERQRKI-----QQQKVEMEQIRAEQEEARQREVRRLEEERAREMErvrleEQ 456
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1034590149 213 LRRGQESRL-QAEEETRLCAQEAEALRREALGLEQLRARLEDALLRMREEYGIQAEERQRVIDCLEDEKAT 282
Cdd:pfam17380 457 ERQQQVERLrQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKRKLLEKEMEERQK 527
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
55-258 |
1.62e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 42.80 E-value: 1.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 55 EGQARCAEEARSLRQQLDELSWATALAEGERDALRRELRELQrldAEERaargRLDAELGAQQRELQEALGARAALEALL 134
Cdd:pfam15921 755 EAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLR---SQER----RLKEKVANMEVALDKASLQFAECQDII 827
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 135 GRLQAERRGLDAAHERDVRELRARAASLTMHFRARATGPAAPPPRLREV--HDSYALLVAESWRETVQLYEDEVRELEEA 212
Cdd:pfam15921 828 QRQEQESVRLKLQHTLDVKELQGPGYTSNSSMKPRLLQPASFTRTHSNVpsSQSTASFLSHHSRKTNALKEDPTRDLKQL 907
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1034590149 213 LrrgQESRLQAEEETRLCAQEAEALRReALGLEQLRARLEDALLRM 258
Cdd:pfam15921 908 L---QELRSVINEEPTVQLSKAEDKGR-APSLGALDDRVRDCIIES 949
|
|
| FUSC |
pfam04632 |
Fusaric acid resistance protein family; This family includes a conserved region found in two ... |
137-290 |
1.86e-03 |
|
Fusaric acid resistance protein family; This family includes a conserved region found in two proteins associated with fusaric acid resistance, from Burkholderia cepacia and Klebsiella oxytoca. These proteins are likely to be membrane transporter proteins.
Pssm-ID: 428044 [Multi-domain] Cd Length: 655 Bit Score: 42.27 E-value: 1.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 137 LQAERRGL-DAAH---ERDVRELRARAASLTMHFRARAtgPAAPPPRLREVHDSYALLVAEswRETVQLYEDEVRELEEA 212
Cdd:pfam04632 508 LRALRRDLaRAARrraAGARARFESRMLDRLAQLAPRL--AAAPPARRRALRDGLAALRLG--RAVIRLRRALARALPAP 583
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034590149 213 LRRGQESRLQAEEETRLCAQEAEALRRealgLEQLRARLEDALLRMREEygIQAEERQRVIDCLEDekatLTLAMADW 290
Cdd:pfam04632 584 ARAALDRVLRALARAPAAGRLARRLRA----PARLLRELDAALAALAAD--GAPSALRRALAALHF----LRLALLDP 651
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
62-253 |
2.18e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 42.64 E-value: 2.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 62 EEARSLRQQLDELSwatALAEgERDALRRELRELQRLDAEERAARGRLDAELGAQQRELQEAlgarAALEALLGRLQAER 141
Cdd:PRK04863 496 DVARELLRRLREQR---HLAE-QLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDDE----DELEQLQEELEARL 567
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 142 RGLDAAherdVRELRARAASLTMH---FRARATGPAAPPPRLREVHDSYALLVAESWR--ETVQLYEDEVRELEEALRRG 216
Cdd:PRK04863 568 ESLSES----VSEARERRMALRQQleqLQARIQRLAARAPAWLAAQDALARLREQSGEefEDSQDVTEYMQQLLEREREL 643
|
170 180 190
....*....|....*....|....*....|....*...
gi 1034590149 217 QESRLQAEEETRLCAQEAEAL-RREALGLEQLRARLED 253
Cdd:PRK04863 644 TVERDELAARKQALDEEIERLsQPGGSEDPRLNALAER 681
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
61-163 |
2.62e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.93 E-value: 2.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 61 AEEARSLRQQLDELSWATALAEGERDALRRELRELQRLDAEERAARG---------RLDAELGAQQRELQEALG------ 125
Cdd:COG3206 211 SEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPellqspviqQLRAQLAELEAELAELSArytpnh 290
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1034590149 126 -----ARAALEALLGRLQAERRGLDAAHERDVRELRARAASLT 163
Cdd:COG3206 291 pdviaLRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQ 333
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
192-576 |
2.74e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.05 E-value: 2.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 192 AESWRETVQLYEDEVRELEEALRRGQESRlQAEEETRlcAQEA----EALRREALGLEQLRARLEDAllrMREEYGIQAE 267
Cdd:PTZ00121 1100 AEEAKKTETGKAEEARKAEEAKKKAEDAR-KAEEARK--AEDArkaeEARKAEDAKRVEIARKAEDA---RKAEEARKAE 1173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 268 ERQRVidclEDEKATLTLAMADWLRDYQDLLQVKTGLSLE---VATYRALLEGESNPEIVIWAEHVENMPSEFRnksyhy 344
Cdd:PTZ00121 1174 DAKKA----EAARKAEEVRKAEELRKAEDARKAEAARKAEeerKAEEARKAEDAKKAEAVKKAEEAKKDAEEAK------ 1243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 345 tdsllQRENERNLFSRQKAPLASFNHSSALYSNLSGHrgsqtgtsiggDARRgflgsgySSSATTQQENSYGKAVSSQTN 424
Cdd:PTZ00121 1244 -----KAEEERNNEEIRKFEEARMAHFARRQAAIKAE-----------EARK-------ADELKKAEEKKKADEAKKAEE 1300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 425 VRTFSPtygLLRNTEAQVKTFPDRPKAGDTREVPVYIGEDSTIARESYRDRRDKVAAGASESTRSNErtvilgKKTEVKA 504
Cdd:PTZ00121 1301 KKKADE---AKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEE------KAEAAEK 1371
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034590149 505 TREQERNRPETIRTKPEE-KMFDSKEKASEERNLRWEELTKldKEARQRESQQMKEKAKEKDSPKEKSVRERE 576
Cdd:PTZ00121 1372 KKEEAKKKADAAKKKAEEkKKADEAKKKAEEDKKKADELKK--AAAAKKKADEAKKKAEEKKKADEAKKKAEE 1442
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
58-262 |
2.87e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.68 E-value: 2.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 58 ARCAEEARSLRQQLDELSWATALAEGERDALRRELRELQRLDAEERAARGRLD-AELGAQQRELQEALGArAALEALLGR 136
Cdd:COG4717 312 ALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQlEELEQEIAALLAEAGV-EDEEELRAA 390
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 137 LQAERRGLDAAHERDVRELRARAASLTMHFRARATGPAAPPPRLREVHDSYALLvaeswRETVQLYEDEVRELEEALRRG 216
Cdd:COG4717 391 LEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEEL-----EEELEELREELAELEAELEQL 465
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1034590149 217 QESRL--QAEEETRLCAQEAEALRREALGLEQLRARLEDALLRMREEY 262
Cdd:COG4717 466 EEDGElaELLQELEELKAELRELAEEWAALKLALELLEEAREEYREER 513
|
|
| COG3920 |
COG3920 |
Two-component sensor histidine kinase, HisKA and HATPase domains [Signal transduction ... |
28-240 |
3.81e-03 |
|
Two-component sensor histidine kinase, HisKA and HATPase domains [Signal transduction mechanisms];
Pssm-ID: 443125 [Multi-domain] Cd Length: 495 Bit Score: 41.43 E-value: 3.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 28 RVRELERENLLLEEELRGRRGREGLWAEGQARCAEEARSLRQQLDELSWATALAEGERDALRRELRELQRLDAEERAARG 107
Cdd:COG3920 89 LLLLLAAAALALALLLAALAGLLLLAALLLLRLVALLAALALLALLLLLLLLLAILALAELAVALAELAAALLLLAEELA 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 108 RLDAELGAQQRELQEALGARAALEALLGRLQAERRGLDAAHERDVRELRARAASLTMHFRARATGPAAPPPRLREVHDSY 187
Cdd:COG3920 169 ALRLAAAALLLLLAALLDLGLALAALAAAALLALLLALELLLALLLLLLLLLALLLVLLAALLRLRAAVLEELERRRRAR 248
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1034590149 188 ALLVAESWRETVQLYEDEVRELEEALRRGQESRLQAEEETRLCAQEAEALRRE 240
Cdd:COG3920 249 GLGRLLLLLLLLLLLLRALLLLAAGIRLVITERKRAEEELEASLEEKELLLRE 301
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
54-271 |
4.66e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 41.28 E-value: 4.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 54 AEGQARCAEEAR---SLRQQLDELSWATALAEGERDAlRRELRELQRLDAEERAARGRLDAELGAQQRELQEALGARAAL 130
Cdd:PTZ00121 1459 AEEAKKKAEEAKkadEAKKKAEEAKKADEAKKKAEEA-KKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKAD 1537
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 131 EAllgRLQAERRGLD----------AAHERDVRELRARAASLTMHFRARATGPAAPPPRLREVHDSYallvaeswRETVQ 200
Cdd:PTZ00121 1538 EA---KKAEEKKKADelkkaeelkkAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLY--------EEEKK 1606
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1034590149 201 LYEDEVRELEEALRRGQESRlQAEEETRLCAQEAEALRREALGLEQLRARLEDALLRMREEYGIQAEERQR 271
Cdd:PTZ00121 1607 MKAEEAKKAEEAKIKAEELK-KAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKK 1676
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
62-251 |
4.75e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.29 E-value: 4.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 62 EEARSLRQQLDELSWATALAEGERDALRRELRELQRLDA--EERAARGRLDAELGAQQRELQEALGARAALEALLGRLQa 139
Cdd:COG4717 88 EEYAELQEELEELEEELEELEAELEELREELEKLEKLLQllPLYQELEALEAELAELPERLEELEERLEELRELEEELE- 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 140 errgldaAHERDVRELRARAASLTMHFRARAtgpaappprlrEVHDSYALLVAESWRETVQLYEDEVRELEEALRRgQES 219
Cdd:COG4717 167 -------ELEAELAELQEELEELLEQLSLAT-----------EEELQDLAEELEELQQRLAELEEELEEAQEELEE-LEE 227
|
170 180 190
....*....|....*....|....*....|..
gi 1034590149 220 RLQAEEETRLCAQEAEALRREALGLEQLRARL 251
Cdd:COG4717 228 ELEQLENELEAAALEERLKEARLLLLIAAALL 259
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
57-210 |
5.48e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 41.08 E-value: 5.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 57 QARCAEEARSLRQQLDELSWATALAEGERDALRRELRELQRLDAEERAARGRLDAELGAQQRELQEALGARAALEALLgR 136
Cdd:COG1196 629 AARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEE-R 707
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1034590149 137 LQAERRGLDAAHERDVRELRARAASLTMHFRARATGPAAPPPRLrEVHDSYALLVAESWRETVQLYEDEVRELE 210
Cdd:COG1196 708 ELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEE-ALEELPEPPDLEELERELERLEREIEALG 780
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
53-311 |
5.64e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 40.98 E-value: 5.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 53 WAEGQARCAEEARSLRQQldelswATALAEGERDAlrrelrELQRLDAEERAARGRLDAELGAQQRELQEALGARAALEA 132
Cdd:pfam12128 701 WLEEQKEQKREARTEKQA------YWQVVEGALDA------QLALLKAAIAARRSGAKAELKALETWYKRDLASLGVDPD 768
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 133 LLGRLQAERRGLDAAHErdvrelraraasltmhfRARATGPAAppprlREVHDSYallvAESWRETVQLYEDEVRELEEA 212
Cdd:pfam12128 769 VIAKLKREIRTLERKIE-----------------RIAVRRQEV-----LRYFDWY----QETWLQRRPRLATQLSNIERA 822
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 213 LR--RGQESRLQAEEETRLCAqeaealrrealgLEQLRARLEDALLRMREEYGIQAEERQRVIDCLEDEKA-TLTLAMAD 289
Cdd:pfam12128 823 ISelQQQLARLIADTKLRRAK------------LEMERKASEKQQVRLSENLRGLRCEMSKLATLKEDANSeQAQGSIGE 890
|
250 260
....*....|....*....|..
gi 1034590149 290 WLRDYQDLLQVKTGLSLEVATY 311
Cdd:pfam12128 891 RLAQLEDLKLKRDYLSESVKKY 912
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
3-261 |
5.96e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 40.81 E-value: 5.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 3 SWRLQTGPEKAELQELNARLYDYVCRVrelerenllleeelRGRRGREGLWAEGQARCAEEARSLRQQLDELSWATALAE 82
Cdd:TIGR02168 800 ALREALDELRAELTLLNEEAANLRERL--------------ESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELE 865
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 83 GERDALRRELRELQRLDAEERAARGRLDAELGAQQRELQEALGARAALEALLGRLQAERrgldAAHERDVRELRARAASL 162
Cdd:TIGR02168 866 ELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKL----AQLELRLEGLEVRIDNL 941
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 163 TMHFRARATGPAAPPPRLrevhdsYALLVAESwretvQLYEDEVRELEEALRRGQESRLQAEEETRLCAQEAEALRREAL 242
Cdd:TIGR02168 942 QERLSEEYSLTLEEAEAL------ENKIEDDE-----EEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKE 1010
|
250
....*....|....*....
gi 1034590149 243 GLEQLRARLEDALLRMREE 261
Cdd:TIGR02168 1011 DLTEAKETLEEAIEEIDRE 1029
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
77-261 |
7.36e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 40.81 E-value: 7.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 77 ATALAEGErdaLRRELRELQrldaeerAARGRLDAElgaQQRELQEALGARAALEALLGRLQAERRGLDAaHERDVRELR 156
Cdd:PRK10929 20 ATAPDEKQ---ITQELEQAK-------AAKTPAQAE---IVEALQSALNWLEERKGSLERAKQYQQVIDN-FPKLSAELR 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 157 ARAASLTMHFRARATGPAAPP-----------------------PRLREVHDSYALLVaeswretvQLYEDEVRELEEAL 213
Cdd:PRK10929 86 QQLNNERDEPRSVPPNMSTDAleqeilqvssqlleksrqaqqeqDRAREISDSLSQLP--------QQQTEARRQLNEIE 157
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1034590149 214 RR--GQESRLQAEEETRLCAQEAEALRREA----LGLEQLRARLEDALLRMREE 261
Cdd:PRK10929 158 RRlqTLGTPNTPLAQAQLTALQAESAALKAlvdeLELAQLSANNRQELARLRSE 211
|
|
| FUSC |
pfam04632 |
Fusaric acid resistance protein family; This family includes a conserved region found in two ... |
64-229 |
9.56e-03 |
|
Fusaric acid resistance protein family; This family includes a conserved region found in two proteins associated with fusaric acid resistance, from Burkholderia cepacia and Klebsiella oxytoca. These proteins are likely to be membrane transporter proteins.
Pssm-ID: 428044 [Multi-domain] Cd Length: 655 Bit Score: 39.96 E-value: 9.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 64 ARSLRQQLDELS-WATALAEGERDALRRElRELQRL-----------------DAEERAARGRLDAELGAQQRELQEALG 125
Cdd:pfam04632 158 RARLRARLRDALrLAAAALAGAPGAEAFE-AARLRLaadilalealrshaafeSPRGRARARALRRLLARMLALLPRLRS 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034590149 126 ARAALEALLGRLQAERRGLDAAherdVRELRARAASLTMHfrARATGPAAPPPRLREVHDSYALLVAESWRETVQLYE-- 203
Cdd:pfam04632 237 LARLLARLRTEGAGTVPELAAL----LDELAAWEAALAAE--ALQAALAALRARLRALRPALPLDFDTAAELLARLADll 310
|
170 180
....*....|....*....|....*.
gi 1034590149 204 DEVRELEEALRRGQESRLQAEEETRL 229
Cdd:pfam04632 311 AELAEALASCRALRHPIAQGARPARL 336
|
|
| |
