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Conserved domains on  [gi|1034559100|ref|XP_016856938|]
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Golgi pH regulator B isoform X3 [Homo sapiens]

Protein Classification

GPHR_N domain-containing protein( domain architecture ID 10576088)

GPHR_N domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
GPHR_N pfam12537
The Golgi pH Regulator (GPHR) Family N-terminal; GPHR_N is the N-terminal 5TM region of the ...
 140-207 8.34e-28

The Golgi pH Regulator (GPHR) Family N-terminal; GPHR_N is the N-terminal 5TM region of the Golgi pH regulator proteins in eukaryotes. It plays vital roles in the transport of newly synthesized proteins from the Golgi to the plasma membrane, in the glycosylation of proteins along the exocytic pathway and the structural organization of the Golgi apparatus.


:

Pssm-ID: 463623  Cd Length: 68  Bit Score: 101.45  E-value: 8.34e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034559100 140 ILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMDMIISKKKRM 207
Cdd:pfam12537   1 FFLIENVLSRVGVIGVTLMAILSGFGAVSTPYYTFSLFLRPVTESDINNLERRLEHTRDLLAEKRKEL 68
 
Name Accession Description Interval E-value
GPHR_N pfam12537
The Golgi pH Regulator (GPHR) Family N-terminal; GPHR_N is the N-terminal 5TM region of the ...
 140-207 8.34e-28

The Golgi pH Regulator (GPHR) Family N-terminal; GPHR_N is the N-terminal 5TM region of the Golgi pH regulator proteins in eukaryotes. It plays vital roles in the transport of newly synthesized proteins from the Golgi to the plasma membrane, in the glycosylation of proteins along the exocytic pathway and the structural organization of the Golgi apparatus.


Pssm-ID: 463623  Cd Length: 68  Bit Score: 101.45  E-value: 8.34e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034559100 140 ILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMDMIISKKKRM 207
Cdd:pfam12537   1 FFLIENVLSRVGVIGVTLMAILSGFGAVSTPYYTFSLFLRPVTESDINNLERRLEHTRDLLAEKRKEL 68
 
Name Accession Description Interval E-value
GPHR_N pfam12537
The Golgi pH Regulator (GPHR) Family N-terminal; GPHR_N is the N-terminal 5TM region of the ...
 140-207 8.34e-28

The Golgi pH Regulator (GPHR) Family N-terminal; GPHR_N is the N-terminal 5TM region of the Golgi pH regulator proteins in eukaryotes. It plays vital roles in the transport of newly synthesized proteins from the Golgi to the plasma membrane, in the glycosylation of proteins along the exocytic pathway and the structural organization of the Golgi apparatus.


Pssm-ID: 463623  Cd Length: 68  Bit Score: 101.45  E-value: 8.34e-28
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1034559100 140 ILSIEQLISRVGVIGVTLMALLSGFGAVNCPYTYMSYFLRNVTDTDILALERRLLQTMDMIISKKKRM 207
Cdd:pfam12537   1 FFLIENVLSRVGVIGVTLMAILSGFGAVSTPYYTFSLFLRPVTESDINNLERRLEHTRDLLAEKRKEL 68
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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