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Conserved domains on  [gi|974088368|ref|XP_015242313|]
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PREDICTED: ubiquinone biosynthesis monooxygenase COQ6, mitochondrial [Cyprinodon variegatus]

Protein Classification

Rossmann-fold NAD(P)-binding domain-containing protein( domain architecture ID 229380)

Rossmann-fold NAD(P)-binding domain-containing protein may function as an oxidoreductase

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NADB_Rossmann super family cl21454
Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a ...
 49-477 0e+00

Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The NADB domain is found in numerous dehydrogenases of metabolic pathways such as glycolysis, and many other redox enzymes. NAD binding involves numerous hydrogen-bonds and van der Waals contacts, in particular H-bonding of residues in a turn between the first strand and the subsequent helix of the Rossmann-fold topology. Characteristically, this turn exhibits a consensus binding pattern similar to GXGXXG, in which the first 2 glycines participate in NAD(P)-binding, and the third facilitates close packing of the helix to the beta-strand. Typically, proteins in this family contain a second domain in addition to the NADB domain, which is responsible for specifically binding a substrate and catalyzing a particular enzymatic reaction.


The actual alignment was detected with superfamily member TIGR01989:

Pssm-ID: 473865 [Multi-domain]  Cd Length: 437  Bit Score: 560.14  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368   49 YDVIISGGGMVGSAMACSLGMDPNLSEKKILLLEAGHKK-----VMDRLPDTYSTRVSSISPGSATLLSGIGAWEHITRM 123
Cdd:TIGR01989   1 FDVVIVGGGPVGLALAAALGNNPLTKDLKVLLLDAVDNPklksrNYEKPDGPYSNRVSSITPASISFFKKIGAWDHIQSD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  124 RYKPYKRMQVWDACSDALITFDKEDLLDEMAYIVENDIVVAAITRQL-DTLPENVQVKYKSKVVKYTWPMPHhAAESIPW 202
Cdd:TIGR01989  81 RIQPFGRMQVWDGCSLALIRFDRDNGKEDMACIIENDNIQNSLYNRLqEYNGDNVKILNPARLISVTIPSKY-PNDNSNW 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  203 VKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTENNVAWQRFLPTGPIAMLPLSDTESS 282
Cdd:TIGR01989 160 VHITLSDGQVLYTKLLIGADGSNSNVRKAANIDTTGWNYNQHAVVATLKLEEATENDVAWQRFLPTGPIALLPLPDNNST 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  283 LVWSTGHHLAEELLELDEESFVDAVNSAF---WSNENQSDLIETAGALFRGALSAIMPSEGSPRQLPPSVAGIGPKSRVM 359
Cdd:TIGR01989 240 LVWSTSPEEALRLLSLPPEDFVDALNAAFdlgYSDHPYSYLLDYAMEKLNEDIGFRTEGSKSCFQVPPRVIGVVDKSRAA 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  360 FPLGIGHASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMT 439
Cdd:TIGR01989 320 FPLGLGHADEYVTKRVALVGDAAHRVHPLAGQGVNLGFGDVASLVKALAEAVSVGADIGSISSLKPYERERYAKNVVLLG 399

                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 974088368  440 VIDLMKRLYSTNAAPVVLLRTFGLQATNMLPTLKEQIM 477
Cdd:TIGR01989 400 LVDKLHKLYATDFPPVVALRTFGLNLTNYIGPLKNFIM 437
 
Name Accession Description Interval E-value
COQ6 TIGR01989
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase ...
 49-477 0e+00

ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone


Pssm-ID: 273914 [Multi-domain]  Cd Length: 437  Bit Score: 560.14  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368   49 YDVIISGGGMVGSAMACSLGMDPNLSEKKILLLEAGHKK-----VMDRLPDTYSTRVSSISPGSATLLSGIGAWEHITRM 123
Cdd:TIGR01989   1 FDVVIVGGGPVGLALAAALGNNPLTKDLKVLLLDAVDNPklksrNYEKPDGPYSNRVSSITPASISFFKKIGAWDHIQSD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  124 RYKPYKRMQVWDACSDALITFDKEDLLDEMAYIVENDIVVAAITRQL-DTLPENVQVKYKSKVVKYTWPMPHhAAESIPW 202
Cdd:TIGR01989  81 RIQPFGRMQVWDGCSLALIRFDRDNGKEDMACIIENDNIQNSLYNRLqEYNGDNVKILNPARLISVTIPSKY-PNDNSNW 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  203 VKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTENNVAWQRFLPTGPIAMLPLSDTESS 282
Cdd:TIGR01989 160 VHITLSDGQVLYTKLLIGADGSNSNVRKAANIDTTGWNYNQHAVVATLKLEEATENDVAWQRFLPTGPIALLPLPDNNST 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  283 LVWSTGHHLAEELLELDEESFVDAVNSAF---WSNENQSDLIETAGALFRGALSAIMPSEGSPRQLPPSVAGIGPKSRVM 359
Cdd:TIGR01989 240 LVWSTSPEEALRLLSLPPEDFVDALNAAFdlgYSDHPYSYLLDYAMEKLNEDIGFRTEGSKSCFQVPPRVIGVVDKSRAA 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  360 FPLGIGHASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMT 439
Cdd:TIGR01989 320 FPLGLGHADEYVTKRVALVGDAAHRVHPLAGQGVNLGFGDVASLVKALAEAVSVGADIGSISSLKPYERERYAKNVVLLG 399

                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 974088368  440 VIDLMKRLYSTNAAPVVLLRTFGLQATNMLPTLKEQIM 477
Cdd:TIGR01989 400 LVDKLHKLYATDFPPVVALRTFGLNLTNYIGPLKNFIM 437
PRK07608 PRK07608
UbiH/UbiF family hydroxylase;
49-481 1.69e-77

UbiH/UbiF family hydroxylase;


Pssm-ID: 181057 [Multi-domain]  Cd Length: 388  Bit Score: 247.17  E-value: 1.69e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  49 YDVIISGGGMVGSAMACSLGMdpnlSEKKILLLEAGhkKVMDRLPDTYSTRVSSISPGSATLLSGIGAWEHITRMRYKPY 128
Cdd:PRK07608   6 FDVVVVGGGLVGASLALALAQ----SGLRVALLAPR--APPRPADDAWDSRVYAISPSSQAFLERLGVWQALDAARLAPV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 129 KRMQVW-DAcsDALITFDK-EDLLDEMAYIVENDIVVAAITRQLDTlPENVQVKYKSKVVkytWPMPHHAAEsipwvkVT 206
Cdd:PRK07608  80 YDMRVFgDA--HARLHFSAyQAGVPQLAWIVESSLIERALWAALRF-QPNLTWFPARAQG---LEVDPDAAT------LT 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 207 LANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPtENNVAWQRFLPTGPIAMLPLSDTESSLVWS 286
Cdd:PRK07608 148 LADGQVLRADLVVGADGAHSWVRSQAGIKAERRPYRQTGVVANFKAERP-HRGTAYQWFRDDGILALLPLPDGHVSMVWS 226

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 287 TghhlaeelleldeeSFVDAVNSAFWSNENQSDLIETAGALFRGALSAIMPSEGsprqlppsvagigpksrvmFPLGIGH 366
Cdd:PRK07608 227 A--------------RTAHADELLALSPEALAARVERASGGRLGRLECVTPAAG-------------------FPLRLQR 273

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 367 ASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAfNGKDLGAIQHLLEYETERQRHNLPMMTVIDLMKR 446
Cdd:PRK07608 274 VDRLVAPRVALVGDAAHLIHPLAGQGMNLGLRDVAALADVLAGRE-PFRDLGDLRLLRRYERARREDILALQVATDGLQR 352

                        410       420       430
                 ....*....|....*....|....*....|....*
gi 974088368 447 LYSTNAAPVVLLRTFGLQATNMLPTLKEQIMAYAS 481
Cdd:PRK07608 353 LFALPGPLARWLRNAGMALVGALPLVKRWLVRHAL 387
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 46-473 2.73e-53

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 182.06  E-value: 2.73e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  46 TEVYDVIISGGGMVGSAMACSL---GMDpnlsekkILLLEAghkkvmDRLPDTYStRVSSISPGSATLLSGIGAWEHItR 122
Cdd:COG0654    1 MMRTDVLIVGGGPAGLALALALaraGIR-------VTVVER------APPPRPDG-RGIALSPRSLELLRRLGLWDRL-L 65

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 123 MRYKPYKRMQVWDACSDALIT-FDKEDLLDEMAYIVENDIVVAAITRQLDTLpeNVQVKYKSKVVKYtwpmpHHAAESip 201
Cdd:COG0654   66 ARGAPIRGIRVRDGSDGRVLArFDAAETGLPAGLVVPRADLERALLEAARAL--GVELRFGTEVTGL-----EQDADG-- 136

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 202 wVKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLseptennvawqrflptgpiamlplsdtes 281
Cdd:COG0654  137 -VTVTLADGRTLRADLVVGADGARSAVRRLLGIGFTGRDYPQRALWAGVRT----------------------------- 186

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 282 slvwstghhlaeelleldeeSFVDAVNSAFWsnenqsDLietagalfrGALSAIMPsegsprqlppsvagigpksRVMFP 361
Cdd:COG0654  187 --------------------ELRARLAAAGP------RL---------GELLELSP-------------------RSAFP 212

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 362 LGIGHASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAiqhLLEYETERQRHNLPMMTVI 441
Cdd:COG0654  213 LRRRRAERWRRGRVVLLGDAAHTMHPLGGQGANLALRDAAALAWKLAAALRGRDDEAA---LARYERERRPRAARVQRAA 289

                        410       420       430
                 ....*....|....*....|....*....|..
gi 974088368 442 DLMKRLYSTNAAPVVLLRTFGLQATNMLPTLK 473
Cdd:COG0654  290 DALGRLFHPDSPPLRLLRNAGLRLLDRLPPLK 321
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 49-433 1.63e-12

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 68.51  E-value: 1.63e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368   49 YDVIISGGGMVGSAMAcslgmdpnlsekkILLLEAGHKKVM-DRLPDTYST-RVSSISPGSATLLSGIGAWEHITRMRYk 126
Cdd:pfam01494   2 TDVLIVGGGPAGLMLA-------------LLLARAGVRVVLvERHATTSVLpRAHGLNQRTMELLRQAGLEDRILAEGV- 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  127 PYKRMQVWDACSDALITFDKEDLLDEMAYI----VENDIVVAAITRqldtlpeNVQVKYKSKVVKYTwpmpHHAAESIPW 202
Cdd:pfam01494  68 PHEGMGLAFYNTRRRADLDFLTSPPRVTVYpqteLEPILVEHAEAR-------GAQVRFGTEVLSLE----QDGDGVTAV 136

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  203 VKVtLANGE--TLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTENNVA------WQRFLPTGPIAML 274
Cdd:pfam01494 137 VRD-RRDGEeyTVRAKYLVGCDGGRSPVRKTLGIEFEGFEGVPFGSLDVLFDAPDLSDPVErafvhyLIYAPHSRGFMVG 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  275 PLSDTESS---LVWSTGHHLAEelleldeesfvdavnsafWSNEnqsdliETAGALFRGALSAIMPSEGSPRQLPPSVAG 351
Cdd:pfam01494 216 PWRSAGREryyVQVPWDEEVEE------------------RPEE------FTDEELKQRLRSIVGIDLALVEILWKSIWG 271

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  352 IgpKSRVmfplgighASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSqAAFNGKdlgAIQHLLE-YETER 430
Cdd:pfam01494 272 V--ASRV--------ATRYRKGRVFLAGDAAHIHPPTGGQGLNTAIQDAFNLAWKLA-AVLRGQ---AGESLLDtYSAER 337


                  ...
gi 974088368  431 QRH 433
Cdd:pfam01494 338 LPV 340
 
Name Accession Description Interval E-value
COQ6 TIGR01989
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase ...
 49-477 0e+00

ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone


Pssm-ID: 273914 [Multi-domain]  Cd Length: 437  Bit Score: 560.14  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368   49 YDVIISGGGMVGSAMACSLGMDPNLSEKKILLLEAGHKK-----VMDRLPDTYSTRVSSISPGSATLLSGIGAWEHITRM 123
Cdd:TIGR01989   1 FDVVIVGGGPVGLALAAALGNNPLTKDLKVLLLDAVDNPklksrNYEKPDGPYSNRVSSITPASISFFKKIGAWDHIQSD 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  124 RYKPYKRMQVWDACSDALITFDKEDLLDEMAYIVENDIVVAAITRQL-DTLPENVQVKYKSKVVKYTWPMPHhAAESIPW 202
Cdd:TIGR01989  81 RIQPFGRMQVWDGCSLALIRFDRDNGKEDMACIIENDNIQNSLYNRLqEYNGDNVKILNPARLISVTIPSKY-PNDNSNW 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  203 VKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTENNVAWQRFLPTGPIAMLPLSDTESS 282
Cdd:TIGR01989 160 VHITLSDGQVLYTKLLIGADGSNSNVRKAANIDTTGWNYNQHAVVATLKLEEATENDVAWQRFLPTGPIALLPLPDNNST 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  283 LVWSTGHHLAEELLELDEESFVDAVNSAF---WSNENQSDLIETAGALFRGALSAIMPSEGSPRQLPPSVAGIGPKSRVM 359
Cdd:TIGR01989 240 LVWSTSPEEALRLLSLPPEDFVDALNAAFdlgYSDHPYSYLLDYAMEKLNEDIGFRTEGSKSCFQVPPRVIGVVDKSRAA 319

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  360 FPLGIGHASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMT 439
Cdd:TIGR01989 320 FPLGLGHADEYVTKRVALVGDAAHRVHPLAGQGVNLGFGDVASLVKALAEAVSVGADIGSISSLKPYERERYAKNVVLLG 399

                         410       420       430
                  ....*....|....*....|....*....|....*...
gi 974088368  440 VIDLMKRLYSTNAAPVVLLRTFGLQATNMLPTLKEQIM 477
Cdd:TIGR01989 400 LVDKLHKLYATDFPPVVALRTFGLNLTNYIGPLKNFIM 437
Ubi-OHases TIGR01988
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ...
 50-481 9.75e-147

Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]


Pssm-ID: 273913 [Multi-domain]  Cd Length: 385  Bit Score: 424.69  E-value: 9.75e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368   50 DVIISGGGMVGSAMACSLGMDPnlseKKILLLEagHKKVMDRLPDTYSTRVSSISPGSATLLSGIGAWEHITRMRYKPYK 129
Cdd:TIGR01988   1 DIVIVGGGMVGLALALALARSG----LKVALIE--ATPLPAPADPGFDNRVSALSAASIRLLEKLGVWDKIEPARAQPIR 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  130 RMQVWDACSDALITFDKEDL-LDEMAYIVENDIVVAAITRQLDTLPeNVQVKYKSKVVkytwPMPHHAaesiPWVKVTLA 208
Cdd:TIGR01988  75 DIHVSDGGSFGALRFDADEIgLEALGYVVENRVLQQALWERLQELP-NVTLLCPARVV----ELPRHS----DHVELTLD 145

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  209 NGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTeNNVAWQRFLPTGPIAMLPLSDTESSLVWSTG 288
Cdd:TIGR01988 146 DGQQLRARLLVGADGANSKVRQLAGIPTTGWDYGQSAVVANVKHERPH-QGTAWERFTPTGPLALLPLPDNRSSLVWTLP 224

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  289 HHLAEELLELDEESFVDAVNSAFWSnenqsdlietagalfrgalsaimpsegsprQLPPSVAgigPKSRVMFPLGIGHAS 368
Cdd:TIGR01988 225 PEEAERLLALSDEEFLAELQRAFGS------------------------------RLGAITL---VGERHAFPLSLTHAK 271

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  369 EYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMTVIDLMKRLY 448
Cdd:TIGR01988 272 RYVAPRLALIGDAAHTIHPLAGQGLNLGLRDVAALAEVLEDARRRGEDIGSLRVLQRYERRRRFDNAAMLGATDGLNRLF 351

                         410       420       430
                  ....*....|....*....|....*....|...
gi 974088368  449 STNAAPVVLLRTFGLQATNMLPTLKEQIMAYAS 481
Cdd:TIGR01988 352 SNDFPPLRLLRNLGLRLLNNLPPLKNFIARYAM 384
PRK07608 PRK07608
UbiH/UbiF family hydroxylase;
49-481 1.69e-77

UbiH/UbiF family hydroxylase;


Pssm-ID: 181057 [Multi-domain]  Cd Length: 388  Bit Score: 247.17  E-value: 1.69e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  49 YDVIISGGGMVGSAMACSLGMdpnlSEKKILLLEAGhkKVMDRLPDTYSTRVSSISPGSATLLSGIGAWEHITRMRYKPY 128
Cdd:PRK07608   6 FDVVVVGGGLVGASLALALAQ----SGLRVALLAPR--APPRPADDAWDSRVYAISPSSQAFLERLGVWQALDAARLAPV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 129 KRMQVW-DAcsDALITFDK-EDLLDEMAYIVENDIVVAAITRQLDTlPENVQVKYKSKVVkytWPMPHHAAEsipwvkVT 206
Cdd:PRK07608  80 YDMRVFgDA--HARLHFSAyQAGVPQLAWIVESSLIERALWAALRF-QPNLTWFPARAQG---LEVDPDAAT------LT 147

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 207 LANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPtENNVAWQRFLPTGPIAMLPLSDTESSLVWS 286
Cdd:PRK07608 148 LADGQVLRADLVVGADGAHSWVRSQAGIKAERRPYRQTGVVANFKAERP-HRGTAYQWFRDDGILALLPLPDGHVSMVWS 226

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 287 TghhlaeelleldeeSFVDAVNSAFWSNENQSDLIETAGALFRGALSAIMPSEGsprqlppsvagigpksrvmFPLGIGH 366
Cdd:PRK07608 227 A--------------RTAHADELLALSPEALAARVERASGGRLGRLECVTPAAG-------------------FPLRLQR 273

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 367 ASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAfNGKDLGAIQHLLEYETERQRHNLPMMTVIDLMKR 446
Cdd:PRK07608 274 VDRLVAPRVALVGDAAHLIHPLAGQGMNLGLRDVAALADVLAGRE-PFRDLGDLRLLRRYERARREDILALQVATDGLQR 352

                        410       420       430
                 ....*....|....*....|....*....|....*
gi 974088368 447 LYSTNAAPVVLLRTFGLQATNMLPTLKEQIMAYAS 481
Cdd:PRK07608 353 LFALPGPLARWLRNAGMALVGALPLVKRWLVRHAL 387
PRK07364 PRK07364
FAD-dependent hydroxylase;
37-473 1.80e-77

FAD-dependent hydroxylase;


Pssm-ID: 236001 [Multi-domain]  Cd Length: 415  Bit Score: 248.01  E-value: 1.80e-77
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  37 SENTIDSNKTEVYDVIISGGGMVGSAMACSLgMDPNLsekKILLLEAGHKKVMDRLPDTYStrvssISPGSATLLSGIGA 116
Cdd:PRK07364   7 TSPTLPSTRSLTYDVAIVGGGIVGLTLAAAL-KDSGL---RIALIEAQPAEAAAAKGQAYA-----LSLLSARIFEGIGV 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 117 WEHITRmRYKPYKRMQVWDACSDALITFDKEDL-LDEMAYIVENDIVVAAITRQLDTLPeNVQVKYKSKVVKYtwpmphH 195
Cdd:PRK07364  78 WEKILP-QIGKFRQIRLSDADYPGVVKFQPTDLgTEALGYVGEHQVLLEALQEFLQSCP-NITWLCPAEVVSV------E 149

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 196 AAESIPWVKVTLANGE-TLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPtENNVAWQRFLPTGPIAML 274
Cdd:PRK07364 150 YQQDAATVTLEIEGKQqTLQSKLVVAADGARSPIRQAAGIKTKGWKYWQSCVTATVKHEAP-HNDIAYERFWPSGPFAIL 228

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 275 PLSDTESSLVWSTGHHLAEELLELDEESFVDavnsafwsnenqsDLIETAGALFrGALSAImpsegSPRQLppsvagigp 354
Cdd:PRK07364 229 PLPGNRCQIVWTAPHAQAKALLALPEAEFLA-------------ELQQRYGDQL-GKLELL-----GDRFL--------- 280

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 355 ksrvmFPLGIGHASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHN 434
Cdd:PRK07364 281 -----FPVQLMQSDRYVQHRLALVGDAAHCCHPVGGQGLNLGIRDAAALAQVLQTAHQRGEDIGSLAVLKRYERWRKREN 355

                        410       420       430
                 ....*....|....*....|....*....|....*....
gi 974088368 435 LPMMTVIDLMKRLYSTNAAPVVLLRTFGLQATNMLPTLK 473
Cdd:PRK07364 356 WLILGFTDLLDRLFSNQWWPLVVVRRLGLWLLRHVPPLK 394
PRK08850 PRK08850
2-octaprenyl-6-methoxyphenol hydroxylase; Validated
 50-480 5.34e-76

2-octaprenyl-6-methoxyphenol hydroxylase; Validated


Pssm-ID: 236341 [Multi-domain]  Cd Length: 405  Bit Score: 243.91  E-value: 5.34e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  50 DVIISGGGMVGSAMACSLgmdpNLSEKKILLLEaGH--KKVMDRLPDTystRVSSISPGSATLLSGIGAWEHITRMRYKP 127
Cdd:PRK08850   6 DVAIIGGGMVGLALAAAL----KESDLRIAVIE-GQlpEEALNELPDV---RVSALSRSSEHILRNLGAWQGIEARRAAP 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 128 YKRMQVWDACSDALITFDKEDLLD-EMAYIVENDIVVAAITRQLDTLpENVQVKykskvvkytwpMPHHAA-----ESIP 201
Cdd:PRK08850  78 YIAMEVWEQDSFARIEFDAESMAQpDLGHIVENRVIQLALLEQVQKQ-DNVTLL-----------MPARCQsiavgESEA 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 202 WVkvTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPtENNVAWQRFLPTGPIAMLPLSDTE- 280
Cdd:PRK08850 146 WL--TLDNGQALTAKLVVGADGANSWLRRQMDIPLTHWDYGHSALVANVRTVDP-HNSVARQIFTPQGPLAFLPMSEPNm 222

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 281 SSLVWSTGHHLAEELLELDEESFVDAVNSAFwsnENQSDLIETAGAlfrgalsaimpsegsprqlppsvagigpksRVMF 360
Cdd:PRK08850 223 SSIVWSTEPLRAEALLAMSDEQFNKALTAEF---DNRLGLCEVVGE------------------------------RQAF 269

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 361 PLGIGHASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMTV 440
Cdd:PRK08850 270 PLKMRYARDFVRERVALVGDAAHTIHPLAGQGVNLGLLDAASLAQEILALWQQGRDIGLKRNLRGYERWRKAEAAKMIAA 349

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|
gi 974088368 441 IDLMKRLYSTNAAPVVLLRTFGLQATNMLPTLKEQIMAYA 480
Cdd:PRK08850 350 MQGFRDLFSGSNPAKKLVRGIGMSLAGQLPGAKDEIMKRA 389
ubiF PRK08020
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
 49-480 5.61e-74

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed


Pssm-ID: 181199 [Multi-domain]  Cd Length: 391  Bit Score: 238.34  E-value: 5.61e-74
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  49 YDVIISGGGMVGSAMAcsLGMDPNLSEKKILLLEAGHKKVMDRLPDTystRVSSISPGSATLLSGIGAWEHITRMRYKPY 128
Cdd:PRK08020   6 TDIAIVGGGMVGAALA--LGLAQHGFSVAVLEHAAPAPFDADSQPDV---RISAISAASVALLKGLGVWDAVQAMRSHPY 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 129 KRMQVWDAcSDALITFDKEDL-LDEMAYIVENDIVVAAITRQLDTLPeNVQVKYKSKVVKYTWpmpHHAAesipWvKVTL 207
Cdd:PRK08020  81 RRLETWEW-ETAHVVFDAAELkLPELGYMVENRVLQLALWQALEAHP-NVTLRCPASLQALQR---DDDG----W-ELTL 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 208 ANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTEnNVAWQRFLPTGPIAMLPLSDTESSLVW-- 285
Cdd:PRK08020 151 ADGEEIQAKLVIGADGANSQVRQMAGIGVHGWQYRQSCMLISVKCENPPG-DSTWQQFTPSGPRAFLPLFDNWASLVWyd 229

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 286 STGHHLAeelleldeesfVDAVNSAFWSNEnqsdlIETAgalFRGALSAIMP-SEGSprqlppsvagigpksrvmFPLGI 364
Cdd:PRK08020 230 SPARIRQ-----------LQAMSMAQLQQE-----IAAH---FPARLGAVTPvAAGA------------------FPLTR 272

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 365 GHASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMTVIDLM 444
Cdd:PRK08020 273 RHALQYVQPGLALVGDAAHTINPLAGQGVNLGYRDVDALLDVLVNARSYGEAWASEAVLKRYQRRRMADNLLMQSGMDLF 352

                        410       420       430
                 ....*....|....*....|....*....|....*.
gi 974088368 445 KRLYSTNAAPVVLLRTFGLQATNMLPTLKEQIMAYA 480
Cdd:PRK08020 353 YAGFSNNLPPLRFARNLGLMAAQRAGVLKRQALKYA 388
UbiH TIGR01984
2-polyprenyl-6-methoxyphenol 4-hydroxylase; This model represents the FAD-dependent ...
 50-480 4.52e-72

2-polyprenyl-6-methoxyphenol 4-hydroxylase; This model represents the FAD-dependent monoxygenase responsible for the second hydroxylation step in the aerobic ubiquinone bioynthetic pathway. The scope of this model is limited to the proteobacteria. This family is closely related to the UbiF hydroxylase which catalyzes the final hydroxylation step. The enzyme has also been named VisB due to a mutant VISible light sensitive phenotype. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]


Pssm-ID: 273911 [Multi-domain]  Cd Length: 382  Bit Score: 232.97  E-value: 4.52e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368   50 DVIISGGGMVGSAMACSLGmdpNLSEKKILLLEAghkKVMDRLPDTYSTRVSSISPGSATLLSGIGAWEHItRMRYKPYK 129
Cdd:TIGR01984   1 DVIIVGGGLVGLSLALALS---RLGKIKIALIEA---NSPSAAQPGFDARSLALSYGSKQILEKLGLWPKL-APFATPIL 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  130 RMQVWDACSDALITFDKEDL-LDEMAYIVENDIVVAAITRQLDTLPeNVQVKYKSKVVKYTwpmpHHAAESIpwvkVTLA 208
Cdd:TIGR01984  74 DIHVSDQGHFGATHLRASEFgLPALGYVVELADLGQALLSRLALLT-NIQLYCPARYKEII----RNQDYVR----VTLD 144

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  209 NGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTENnVAWQRFLPTGPIAMLPLSDTE-SSLVWST 287
Cdd:TIGR01984 145 NGQQLRAKLLIAADGANSKVRELLSIPTEEHDYNQTALIANIRHEQPHQG-CAFERFTPHGPLALLPLKDNYrSSLVWCL 223

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  288 GHHlaeelleldeesfvdavnsafwsnenQSDLIETAG-ALFRGALSAIM-PSEGSPRQlppsvagIGPKSRvmFPLGIG 365
Cdd:TIGR01984 224 PSK--------------------------QADTIANLPdAEFLAELQQAFgWRLGKITQ-------VGERKT--YPLKLR 268

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  366 HASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAfngKDLGAIQHLLEYETERQRHNLPMMTVIDLMK 445
Cdd:TIGR01984 269 IAETHVHPRVVLIGNAAQTLHPIAGQGFNLGLRDVETLAEVLIDAR---IDLGTYALLQEYLRRRQFDQFITIGLTDGLN 345

                         410       420       430
                  ....*....|....*....|....*....|....*
gi 974088368  446 RLYSTNAAPVVLLRTFGLQATNMLPTLKEQIMAYA 480
Cdd:TIGR01984 346 RLFSNHIPLLRALRNLGLLALENFPPLKKRLARQA 380
PRK05714 PRK05714
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
 50-473 3.76e-70

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional


Pssm-ID: 168201 [Multi-domain]  Cd Length: 405  Bit Score: 228.95  E-value: 3.76e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  50 DVIISGGGMVGSAMACSL---GMDpnlsekkILLLEAGHKKVMDRLPDT-YSTRVSSISPGSATLLSGIGAWEHITRMRY 125
Cdd:PRK05714   4 DLLIVGAGMVGSALALALqgsGLE-------VLLLDGGPLSVKPFDPQApFEPRVSALSAASQRILERLGAWDGIAARRA 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 126 KPYKRMQVWDACSDALITFDKEDLLDE-MAYIVENDIVVAAITRQLDT----LPENVQVKykskvvkytwPMPHHAAEsi 200
Cdd:PRK05714  77 SPYSEMQVWDGSGTGQIHFSAASVHAEvLGHIVENRVVQDALLERLHDsdigLLANARLE----------QMRRSGDD-- 144

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 201 pWVkVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPtENNVAWQRFLPTGPIAMLPLSDTE 280
Cdd:PRK05714 145 -WL-LTLADGRQLRAPLVVAADGANSAVRRLAGCATREWDYLHHAIVTSVRCSEP-HRATAWQRFTDDGPLAFLPLERDG 221

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 281 S----SLVWSTGHHLAEELLELDEESFVDAVNSAFwsnenqsdlietagalfRGALSAIMPSEgsprqlppsvagigpkS 356
Cdd:PRK05714 222 DehwcSIVWSTTPEEAERLMALDDDAFCAALERAF-----------------EGRLGEVLSAD----------------P 268

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 357 RVMFPLGIGHASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLP 436
Cdd:PRK05714 269 RLCVPLRQRHAKRYVEPGLALIGDAAHTIHPLAGQGVNLGFLDAAVLAEVLLHAAERGERLADVRVLSRFERRRMPHNLA 348

                        410       420       430
                 ....*....|....*....|....*....|....*..
gi 974088368 437 MMTVIDLMKRLYSTNAAPVVLLRTFGLQATNMLPTLK 473
Cdd:PRK05714 349 LMAAMEGFERLFQADPLPLRWLRNTGLKLVDQMPEAK 385
PRK08013 PRK08013
oxidoreductase; Provisional
 49-480 1.54e-67

oxidoreductase; Provisional


Pssm-ID: 236139 [Multi-domain]  Cd Length: 400  Bit Score: 221.84  E-value: 1.54e-67
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  49 YDVIISGGGMVGSAMACSL---GMdpnlsekKILLLEaghKKVMDRLP--DTYSTRVSSISPGSATLLSGIGAWEHITRM 123
Cdd:PRK08013   4 VDVVIAGGGMVGLAVACGLqgsGL-------RVAVLE---QRVPEPLAadAPPALRVSAINAASEKLLTRLGVWQDILAR 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 124 RYKPYKRMQVWDACSDALITFDKEDL-LDEMAYIVENDIVVAAITRQLDTLPEnVQVkykskvvkytwpMPHHAAESIPW 202
Cdd:PRK08013  74 RASCYHGMEVWDKDSFGRIAFDDQSMgYSHLGHIIENSVIHYALWQKAQQSSD-ITL------------LAPAELQQVAW 140

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 203 ----VKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPtENNVAWQRFLPTGPIAMLPLSD 278
Cdd:PRK08013 141 geneAFLTLKDGSMLTARLVVGADGANSWLRNKADIPLTFWDYQHHALVATIRTEEP-HDAVARQVFHGDGILAFLPLSD 219

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 279 TE-SSLVWSTGHHLAEELLELDEESFVDAVNSAFwsnENQSDLIETAgalfrgalsaimpsegSPRQLppsvagigpksr 357
Cdd:PRK08013 220 PHlCSIVWSLSPEEAQRMQQAPEEEFNRALAIAF---DNRLGLCELE----------------SERQV------------ 268

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 358 vmFPLGIGHASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGaiQHLLEYETERQR-HNLP 436
Cdd:PRK08013 269 --FPLTGRYARQFAAHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIAELRRLHRQGKDIG--QHLYLRRYERSRkHSAA 344

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*
gi 974088368 437 MMTV-IDLMKRLYSTNAAPVVLLRTFGLQATNMLPTLKEQIMAYA 480
Cdd:PRK08013 345 LMLAgMQGFRDLFAGNNPAKKLLRDIGLKLADTLPGVKPQLIRQA 389
PRK07333 PRK07333
ubiquinone biosynthesis hydroxylase;
49-474 1.63e-66

ubiquinone biosynthesis hydroxylase;


Pssm-ID: 180935 [Multi-domain]  Cd Length: 403  Bit Score: 219.08  E-value: 1.63e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  49 YDVIISGGGMVGSAMACSLGMD-PNLsekKILLLEAGHKKVMDRLPdtystRVSSISPGSATLLSGIGAWEHItRMRYKP 127
Cdd:PRK07333   2 CDVVIAGGGYVGLALAVALKQAaPHL---PVTVVDAAPAGAWSRDP-----RASAIAAAARRMLEALGVWDEI-APEAQP 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 128 YKRMQVWDA-CSDA----LITFDKEDLLDE-MAYIVENDIVVAAITRQLDTLpeNVQVKYKSKVVKYTwPMPHHAAesip 201
Cdd:PRK07333  73 ITDMVITDSrTSDPvrpvFLTFEGEVEPGEpFAHMVENRVLINALRKRAEAL--GIDLREATSVTDFE-TRDEGVT---- 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 202 wvkVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSA-VVAVLHlsEPTENNVAWQRFLPTGPIAMLPLSDTE 280
Cdd:PRK07333 146 ---VTLSDGSVLEARLLVAADGARSKLRELAGIKTVGWDYGQSGiVCTVEH--ERPHGGRAEEHFLPAGPFAILPLKGNR 220

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 281 SSLVWSTGHHLAEELLELDEESFVDAvnsafwsnenqsdlIETAGALFRGALSAImpseGSPRQlppsvagigpksrvmF 360
Cdd:PRK07333 221 SSLVWTERTADAERLVALDDLVFEAE--------------LEQRFGHRLGELKVL----GKRRA---------------F 267

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 361 PLGIGHASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMTV 440
Cdd:PRK07333 268 PLGLTLARSFVAPRFALVGDAAHGIHPIAGQGLNLGLKDVAALAEVVVEAARLGLDIGSLDVLERYQRWRRFDTVRMGVT 347

                        410       420       430
                 ....*....|....*....|....*....|....
gi 974088368 441 IDLMKRLYSTNAAPVVLLRTFGLQATNMLPTLKE 474
Cdd:PRK07333 348 TDVLNRLFSNDSTLLRSVRDIGLGLVDRLPKLKS 381
PRK08849 PRK08849
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
 49-480 2.45e-65

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional


Pssm-ID: 181564 [Multi-domain]  Cd Length: 384  Bit Score: 215.41  E-value: 2.45e-65
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  49 YDVIISGGGMVGSAMACSLGMdpnlSEKKILLLEAGHKKVMDRLPDTySTRVSSISPGSATLLSGIGAWEHITRMRYKPY 128
Cdd:PRK08849   4 YDIAVVGGGMVGAATALGFAK----QGRSVAVIEGGEPKAFEPSQPM-DIRVSAISQTSVDLLESLGAWSSIVAMRVCPY 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 129 KRMQVWDAcSDALITFDKEDL-LDEMAYIVENDIVVAAITRQLDTLPeNVQVKYKSKVVKYTWPMPHHaaesipwvKVTL 207
Cdd:PRK08849  79 KRLETWEH-PECRTRFHSDELnLDQLGYIVENRLIQLGLWQQFAQYP-NLTLMCPEKLADLEFSAEGN--------RVTL 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 208 ANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPtENNVAWQRFLPTGPIAMLPLSDTESSLVWst 287
Cdd:PRK08849 149 ESGAEIEAKWVIGADGANSQVRQLAGIGITAWDYRQHCMLINVETEQP-QQDITWQQFTPSGPRSFLPLCGNQGSLVW-- 225

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 288 ghhlaeelleldeesfvdavnsaFWSNENQSDLietagalfrGALSAIMPSEGSPRQLPPSVAGIGPKSRVMFPLGIGHA 367
Cdd:PRK08849 226 -----------------------YDSPKRIKQL---------SAMNPEQLRSEILRHFPAELGEIKVLQHGSFPLTRRHA 273

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 368 SEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACltqLLSQAAFNGKDLGAIqhLLEYETERQRHNLPMMTVIDLMKRL 447
Cdd:PRK08849 274 QQYVKNNCVLLGDAAHTINPLAGQGVNLGFKDVDV---LLAETEKQGVLNDAS--FARYERRRRPDNLLMQTGMDLFYKT 348

                        410       420       430
                 ....*....|....*....|....*....|...
gi 974088368 448 YSTNAAPVVLLRTFGLQATNMLPTLKEQIMAYA 480
Cdd:PRK08849 349 FSNSLTPLKFVRNAALKLAENSGPLKTQVLKYA 381
PRK08773 PRK08773
UbiH/UbiF family hydroxylase;
44-481 3.65e-64

UbiH/UbiF family hydroxylase;


Pssm-ID: 181552 [Multi-domain]  Cd Length: 392  Bit Score: 212.80  E-value: 3.65e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  44 NKTEVYDVIISGGGMVGSAMACSLGmDPNLSekkILLLEaGHKKVMDRlPDTYSTRVSSISPGSATLLSGIGAWEHITRM 123
Cdd:PRK08773   2 SRRSRRDAVIVGGGVVGAACALALA-DAGLS---VALVE-GREPPRWQ-ADQPDLRVYAFAADNAALLDRLGVWPAVRAA 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 124 RYKPYKRMQVWDACSDALITFDKEDL-LDEMAYIVENDIVVaaiTRQLDTLPE-NVQVKYKSKVVKYTwpmPHHAAesip 201
Cdd:PRK08773  76 RAQPYRRMRVWDAGGGGELGFDADTLgREQLGWIVENDLLV---DRLWAALHAaGVQLHCPARVVALE---QDADR---- 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 202 wVKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTENNvAWQRFLPTGPIAMLPLSDTES 281
Cdd:PRK08773 146 -VRLRLDDGRRLEAALAIAADGAASTLRELAGLPVSRHDYAQRGVVAFVDTEHPHQAT-AWQRFLPTGPLALLPFADGRS 223

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 282 SLVWSTGHHLAEELLELDEESFVDAVNSAFwsnenqsdlietAGALfrGALSAIMPsegsprqlppsvagigpksRVMFP 361
Cdd:PRK08773 224 SIVWTLPDAEAERVLALDEAAFSRELTQAF------------AARL--GEVRVASP-------------------RTAFP 270

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 362 LGIGHASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMTVI 441
Cdd:PRK08773 271 LRRQLVQQYVSGRVLTLGDAAHVVHPLAGQGVNLGLRDVAALQQLVRQAHARRADWAAPHRLQRWARTRRSDNTVAAYGF 350

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|
gi 974088368 442 DLMKRLYSTNAAPVVLLRTFGLQATNMLPTLKEQIMAYAS 481
Cdd:PRK08773 351 DAINRVFSNDEMHLTLLRGSVLGLAGKLPPLVDALWKRAS 390
PRK05732 PRK05732
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
 49-473 7.15e-62

2-octaprenyl-6-methoxyphenyl hydroxylase; Validated


Pssm-ID: 235584 [Multi-domain]  Cd Length: 395  Bit Score: 206.63  E-value: 7.15e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  49 YDVIISGGGMVGSAMACSL--GMDPNLsekKILLLEAghKKVMDRLPDTYSTRVSSISPGSATLLSGIGAWEHItRMRYK 126
Cdd:PRK05732   4 MDVIIVGGGMAGATLALALsrLSHGGL---PVALIEA--FAPESDAHPGFDARAIALAAGTCQQLARLGVWQAL-ADCAT 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 127 PYKRMQVWDACSDALITFDKEDL-LDEMAYIVENDIVVAAITRQLDTLPeNVQVKYKSKVVKYTwpmphHAAESipwVKV 205
Cdd:PRK05732  78 PITHIHVSDRGHAGFVRLDAEDYgVPALGYVVELHDVGQRLFALLDKAP-GVTLHCPARVANVE-----RTQGS---VRV 148

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 206 TLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPtENNVAWQRFLPTGPIAMLPLSDTESSLVW 285
Cdd:PRK05732 149 TLDDGETLTGRLLVAADGSHSALREALGIDWQQHPYEQVAVIANVTTSEA-HQGRAFERFTEHGPLALLPMSDGRCSLVW 227

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 286 stGHHLAEELLeldeesfVDAVNSAFWSNENQSDLIETAGALFRgalsaimpsegsprqlppsvagIGPksRVMFPLGIG 365
Cdd:PRK05732 228 --CHPLEDAEE-------VLSWSDAQFLAELQQAFGWRLGRITH----------------------AGK--RSAYPLALV 274

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 366 HASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQ--RHNLPMMTviDL 443
Cdd:PRK05732 275 TAAQQISHRLALVGNAAQTLHPIAGQGFNLGLRDVMSLAETLTQALARGEDIGDYAVLQRYQQRRQqdREATIGFT--DG 352

                        410       420       430
                 ....*....|....*....|....*....|
gi 974088368 444 MKRLYSTNAAPVVLLRTFGLQATNMLPTLK 473
Cdd:PRK05732 353 LVRLFANRWAPLVVGRNLGLMAMDLLPPAR 382
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 46-473 2.73e-53

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 182.06  E-value: 2.73e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  46 TEVYDVIISGGGMVGSAMACSL---GMDpnlsekkILLLEAghkkvmDRLPDTYStRVSSISPGSATLLSGIGAWEHItR 122
Cdd:COG0654    1 MMRTDVLIVGGGPAGLALALALaraGIR-------VTVVER------APPPRPDG-RGIALSPRSLELLRRLGLWDRL-L 65

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 123 MRYKPYKRMQVWDACSDALIT-FDKEDLLDEMAYIVENDIVVAAITRQLDTLpeNVQVKYKSKVVKYtwpmpHHAAESip 201
Cdd:COG0654   66 ARGAPIRGIRVRDGSDGRVLArFDAAETGLPAGLVVPRADLERALLEAARAL--GVELRFGTEVTGL-----EQDADG-- 136

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 202 wVKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLseptennvawqrflptgpiamlplsdtes 281
Cdd:COG0654  137 -VTVTLADGRTLRADLVVGADGARSAVRRLLGIGFTGRDYPQRALWAGVRT----------------------------- 186

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 282 slvwstghhlaeelleldeeSFVDAVNSAFWsnenqsDLietagalfrGALSAIMPsegsprqlppsvagigpksRVMFP 361
Cdd:COG0654  187 --------------------ELRARLAAAGP------RL---------GELLELSP-------------------RSAFP 212

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 362 LGIGHASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAiqhLLEYETERQRHNLPMMTVI 441
Cdd:COG0654  213 LRRRRAERWRRGRVVLLGDAAHTMHPLGGQGANLALRDAAALAWKLAAALRGRDDEAA---LARYERERRPRAARVQRAA 289

                        410       420       430
                 ....*....|....*....|....*....|..
gi 974088368 442 DLMKRLYSTNAAPVVLLRTFGLQATNMLPTLK 473
Cdd:COG0654  290 DALGRLFHPDSPPLRLLRNAGLRLLDRLPPLK 321
PRK09126 PRK09126
FAD-dependent hydroxylase;
49-479 2.19e-44

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 160.11  E-value: 2.19e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  49 YDVIISGGGMVGSAMACSLGmDPNLsekKILLLEaghKKVMDRLPD-TYSTRVSSISPGSATLLSGIGAWEHITRMRYKP 127
Cdd:PRK09126   4 SDIVVVGAGPAGLSFARSLA-GSGL---KVTLIE---RQPLAALADpAFDGREIALTHASREILQRLGAWDRIPEDEISP 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 128 YKRMQVWDACSDALITFD-KEDLLDEMAYIVEND-IVVAAITRQLDTlpENVQVKYKSKVvkytwpmpHHAAESIPWVKV 205
Cdd:PRK09126  77 LRDAKVLNGRSPFALTFDaRGRGADALGYLVPNHlIRRAAYEAVSQQ--DGIELLTGTRV--------TAVRTDDDGAQV 146

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 206 TLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPtENNVAWQRFLPTGPIAMLPLSDTESSLVW 285
Cdd:PRK09126 147 TLANGRRLTARLLVAADSRFSATRRQLGIGADMHDFGRTMLVCRMRHELP-HHHTAWEWFGYGQTLALLPLNGHLSSLVL 225

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 286 StghhlaeelleldeesfVDAVNSAFWSNENQSDLIETAGALFRGALSAIMpsegsprqlppsVAGigpkSRVMFPLGIG 365
Cdd:PRK09126 226 T-----------------LPPDQIEALLALDPEAFAAEVTARFKGRLGAMR------------LVS----SRHAYPLVAV 272

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 366 HASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQHLLEYETERQRHNLPMMTVIDLMK 445
Cdd:PRK09126 273 YAHRFVAKRFALIGDAAVGMHPVTAHGFNLGLKGQDILARLILAAARRGQDIGAASLLERYERKHRLATRPLYHATNAIA 352

                        410       420       430
                 ....*....|....*....|....*....|....
gi 974088368 446 RLYSTNAAPVVLLRTFGLQATNMLPTLKEQIMAY 479
Cdd:PRK09126 353 ALYTDDRPPARLLRRAVLRAANRFPPLKQAIAKQ 386
PRK07494 PRK07494
UbiH/UbiF family hydroxylase;
45-477 1.67e-38

UbiH/UbiF family hydroxylase;


Pssm-ID: 181001 [Multi-domain]  Cd Length: 388  Bit Score: 144.27  E-value: 1.67e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  45 KTEVYDVIISGGGMVGSAMACSLGmdpnlsekkilllEAGHKKVM-DRLPDTYSTRVSSISPGSATLLSGIGAWEHItRM 123
Cdd:PRK07494   4 EKEHTDIAVIGGGPAGLAAAIALA-------------RAGASVALvAPEPPYADLRTTALLGPSIRFLERLGLWARL-AP 69

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 124 RYKPYKRMQVWDAcSDALI-----TFDKEDL-LDEMAYIVENDIVVAAITRQLDTLPeNVQVkykskvvkytwpmPHHAA 197
Cdd:PRK07494  70 HAAPLQSMRIVDA-TGRLIrapevRFRAAEIgEDAFGYNIPNWLLNRALEARVAELP-NITR-------------FGDEA 134

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 198 ESI----PWVKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVV-AVLHlSEPTEnNVAWQRFLPTGPIA 272
Cdd:PRK07494 135 ESVrpreDEVTVTLADGTTLSARLVVGADGRNSPVREAAGIGVRTWSYPQKALVlNFTH-SRPHQ-NVSTEFHTEGGPFT 212

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 273 MLPLSDTESSLVW-STGHHlaeellELDEESFVDAVNSAFWSNENQSDLietagalfrGALSAimpseGSPRQLppsvag 351
Cdd:PRK07494 213 QVPLPGRRSSLVWvVRPAE------AERLLALSDAALSAAIEERMQSML---------GKLTL-----EPGRQA------ 266

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 352 igpksrvmFPLGIGHASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQaafNGKDLGAIQHLLEYETERQ 431
Cdd:PRK07494 267 --------WPLSGQVAHRFAAGRTALVGEAAHVFPPIGAQGLNLGLRDVATLVEIVED---RPEDPGSAAVLAAYDRARR 335

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*.
gi 974088368 432 RHNLPMMTVIDLMKRLYSTNAAPVVLLRTFGLQATNMLPTLKEQIM 477
Cdd:PRK07494 336 PDILSRTASVDLLNRSLLSDFLPVQDLRAAGLHLLYSFGPLRRLFM 381
PRK06996 PRK06996
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;
40-476 8.52e-34

UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;


Pssm-ID: 235905 [Multi-domain]  Cd Length: 398  Bit Score: 131.35  E-value: 8.52e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  40 TIDSNKTEVYDVIISGGGMVGSAMACSLGMDPNLSEKKILLLEAGHKKVMDRLPdtystRVSSISPGSATLLSGIGAW-- 117
Cdd:PRK06996   3 TAASMAAPDFDIAIVGAGPVGLALAGWLARRSATRALSIALIDAREPAASANDP-----RAIALSHGSRVLLETLGAWpa 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 118 -----EHI---TRMRYkpykrmqvwdacSDALITFDKEDlLDEMAYIVENDIVVAAITRQLDTLPENVQVKYKSKVvkyt 189
Cdd:PRK06996  78 datpiEHIhvsQRGHF------------GRTLIDRDDHD-VPALGYVVRYGSLVAALARAVRGTPVRWLTSTTAHA---- 140

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 190 wpmPHHAAESIPWVKVTLANGETLQTKLLIGADGP-NSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTEnNVAWQRFLPT 268
Cdd:PRK06996 141 ---PAQDADGVTLALGTPQGARTLRARIAVQAEGGlFHDQKADAGDSARRRDYGQTAIVGTVTVSAPRP-GWAWERFTHE 216

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 269 GPIAMLPLSDT---ESSLVWSTGHHLAEELLELDEESFVDAVNSAFWSNenqsdlietagalfRGALSAIMPsegsprql 345
Cdd:PRK06996 217 GPLALLPLGGPrqaDYALVWCCAPDEAARRAALPDDAFLAELGAAFGTR--------------MGRFTRIAG-------- 274

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 346 ppsvagigpksRVMFPLGIGHASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNGKDLGAIQhlle 425
Cdd:PRK06996 275 -----------RHAFPLGLNAARTLVNGRIAAVGNAAQTLHPVAGQGLNLGLRDAHTLADALSDHGATPLALATFA---- 339

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....
gi 974088368 426 yeterQRHNLPMMTVI---DLMKRLYSTNAAPVVLLRTFGLQATNMLPTLKEQI 476
Cdd:PRK06996 340 -----ARRALDRRVTIgatDLLPRLFTVDSRPLAHLRGAALTALEFVPPLKHAL 388
PRK06617 PRK06617
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
 50-480 3.15e-29

2-octaprenyl-6-methoxyphenyl hydroxylase; Validated


Pssm-ID: 168629 [Multi-domain]  Cd Length: 374  Bit Score: 118.10  E-value: 3.15e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  50 DVIISGGGMVGSAMACSLgmdpnlSEK--KILLLEAGHKKVMDRLPDTystRVSSISPGSATLLSGIGAWEHITRMRYKP 127
Cdd:PRK06617   3 NTVILGCGLSGMLTALSF------AQKgiKTTIFESKSVKSPEFFKDI---RTTALTPHSKNFLFSIDIWEELEKFVAEM 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 128 YKRMQVWDACSDALITFDKEDLLdeMAYIVEND----IVVAAITRQ-LDTLPENVQvkykskvvkYTWPMPHHAAESIPW 202
Cdd:PRK06617  74 QDIYVVDNKASEILDLRNDADAV--LGYVVKNSdfkkILLSKITNNpLITLIDNNQ---------YQEVISHNDYSIIKF 142

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 203 vkvtlaNGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYdQSAVVAVLHLSEPTENnVAWQRFLPTGPIAMLPLSDT-ES 281
Cdd:PRK06617 143 ------DDKQIKCNLLIICDGANSKVRSHYFANEIEKPY-QTALTFNIKHEKPHEN-CAMEHFLPLGPFALLPLKDQyAS 214

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 282 SLVWSTghhlaeelleldeesfvdavnsafwsNENQSDLIETagalfrgalsaiMPSEG----SPRQLPPSVAGIGPKSR 357
Cdd:PRK06617 215 SVIWST--------------------------SSDQAALIVN------------LPVEEvrflTQRNAGNSLGKITIDSE 256

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 358 VM-FPLGIGHASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQaafNGKdlgaiqhLLEYETERQRHNLP 436
Cdd:PRK06617 257 ISsFPLKARIANRYFHNRIVLIADTAHTVHPLAGQGLNQGIKDIEILSMIVSN---NGT-------LQEYQKLRQEDNFI 326

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....
gi 974088368 437 MMTVIDLMKRLYSTNAAPVVLLRTFGLQATNMLPTLKEQIMAYA 480
Cdd:PRK06617 327 MYKLTDELNNIFSNYSKNLRCLRQIGFKVINNFKPIKNLITSYA 370
PRK07045 PRK07045
putative monooxygenase; Reviewed
 204-472 4.61e-13

putative monooxygenase; Reviewed


Pssm-ID: 136171 [Multi-domain]  Cd Length: 388  Bit Score: 70.71  E-value: 4.61e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 204 KVTLANGETLQTKLLIGADGPNSMVRQK-LGIPTVKWNYDQSAVVAVLHLSEPTENNVAWQRFLPTGPIAMLPLSDTESS 282
Cdd:PRK07045 143 SVTLSDGERVAPTVLVGADGARSMIRDDvLRMPAERVPYATPMAFGTIALTDSVRECNRLYVDSNQGLAYFYPIGDQATR 222

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 283 LVWStghhlaeelleldeesfvdavnsaFWSNENQSDLIETAGALFRGALSAIMPSEGSPrqlppSVAGIGPKSRV-MFP 361
Cdd:PRK07045 223 LVVS------------------------FPADEMQGYLADTTRTKLLARLNEFVGDESAD-----AMAAIGAGTAFpLIP 273

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 362 LGIGHASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAfngKDLGAIQHLLE-YETERQRHNLPMMTV 440
Cdd:PRK07045 274 LGRMNLDRYHKRNVVLLGDAAHSIHPITGQGMNLAIEDAGELGACLDLHL---SGQIALADALErFERIRRPVNEAVISY 350

                        250       260       270
                 ....*....|....*....|....*....|..
gi 974088368 441 IDLMKRLYSTNAAPVVLLRTfGLQATNMLPTL 472
Cdd:PRK07045 351 GHALATTYHDRAALVANFRS-QLQTSGRDAAW 381
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 49-433 1.63e-12

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 68.51  E-value: 1.63e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368   49 YDVIISGGGMVGSAMAcslgmdpnlsekkILLLEAGHKKVM-DRLPDTYST-RVSSISPGSATLLSGIGAWEHITRMRYk 126
Cdd:pfam01494   2 TDVLIVGGGPAGLMLA-------------LLLARAGVRVVLvERHATTSVLpRAHGLNQRTMELLRQAGLEDRILAEGV- 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  127 PYKRMQVWDACSDALITFDKEDLLDEMAYI----VENDIVVAAITRqldtlpeNVQVKYKSKVVKYTwpmpHHAAESIPW 202
Cdd:pfam01494  68 PHEGMGLAFYNTRRRADLDFLTSPPRVTVYpqteLEPILVEHAEAR-------GAQVRFGTEVLSLE----QDGDGVTAV 136

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  203 VKVtLANGE--TLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTENNVA------WQRFLPTGPIAML 274
Cdd:pfam01494 137 VRD-RRDGEeyTVRAKYLVGCDGGRSPVRKTLGIEFEGFEGVPFGSLDVLFDAPDLSDPVErafvhyLIYAPHSRGFMVG 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  275 PLSDTESS---LVWSTGHHLAEelleldeesfvdavnsafWSNEnqsdliETAGALFRGALSAIMPSEGSPRQLPPSVAG 351
Cdd:pfam01494 216 PWRSAGREryyVQVPWDEEVEE------------------RPEE------FTDEELKQRLRSIVGIDLALVEILWKSIWG 271

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  352 IgpKSRVmfplgighASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSqAAFNGKdlgAIQHLLE-YETER 430
Cdd:pfam01494 272 V--ASRV--------ATRYRKGRVFLAGDAAHIHPPTGGQGLNTAIQDAFNLAWKLA-AVLRGQ---AGESLLDtYSAER 337


                  ...
gi 974088368  431 QRH 433
Cdd:pfam01494 338 LPV 340
PRK06126 PRK06126
hypothetical protein; Provisional
 159-431 8.51e-08

hypothetical protein; Provisional


Pssm-ID: 235704 [Multi-domain]  Cd Length: 545  Bit Score: 54.61  E-value: 8.51e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 159 NDIVVAAITRQLDTLPENVQVKYKSKVVKYTwpmphHAAESIPWVKVTLANGETL--QTKLLIGADGPNSMVRQKLGIP- 235
Cdd:PRK06126 124 PQKYLEPILLEHAAAQPGVTLRYGHRLTDFE-----QDADGVTATVEDLDGGESLtiRADYLVGCDGARSAVRRSLGISy 198

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 236 --TVKWNYDQSAVVAVLHLSEPTENNVAWQRFLpTGPiamlplsDTESSLVWSTGH-----HLAEELLELDEESFVDAVn 308
Cdd:PRK06126 199 egTSGLQRDLSIYIRAPGLAALVGHDPAWMYWL-FNP-------DRRGVLVAIDGRdewlfHQLRGGEDEFTIDDVDAR- 269

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 309 safwsnenqsdlietagALFRGALSAIMPSEgsprqlppsVAGIGPKSRVMFPlgighASEYIRHRVALIGDAAHRVHPL 388
Cdd:PRK06126 270 -----------------AFVRRGVGEDIDYE---------VLSVVPWTGRRLV-----ADSYRRGRVFLAGDAAHLFTPT 318

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 974088368 389 AGQGANLGFGDVACLTQLLsQAAFNGkdLGAIQHLLEYETERQ 431
Cdd:PRK06126 319 GGYGMNTGIGDAVNLAWKL-AAVLNG--WAGPALLDSYEAERR 358
PRK06184 PRK06184
hypothetical protein; Provisional
 205-431 4.82e-06

hypothetical protein; Provisional


Pssm-ID: 235728 [Multi-domain]  Cd Length: 502  Bit Score: 48.83  E-value: 4.82e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 205 VTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQS-AVVAVLHLS--EPTennvAWQRFLP--TGPIAMLPLSDT 279
Cdd:PRK06184 147 AGPAGEETVRARYLVGADGGRSFVRKALGIGFPGETLGIDrMLVADVSLTglDRD----AWHQWPDgdMGMIALCPLPGT 222

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 280 EsslvwstghhlaeelleldeesfvdavnsafwsnenqsdlietagaLFRgaLSAIMPSEGSPrqlPPSVAGI------- 352
Cdd:PRK06184 223 D----------------------------------------------LFQ--IQAPLPPGGEP---DLSADGLtallaer 251

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 353 --GPKSRV-------MFPLGIGHASEYIRHRVALIGDAAHrVHPLAG-QGANLGFgdvacltqllsQAAFN-GKDLGAI- 420
Cdd:PRK06184 252 tgRTDIRLhsvtwasAFRMNARLADRYRVGRVFLAGDAAH-VHPPAGgQGLNTSV-----------QDAYNlGWKLAAVl 319

                        250
                 ....*....|....*.
gi 974088368 421 ----QHLLE-YETERQ 431
Cdd:PRK06184 320 agapEALLDtYEEERR 335
PRK06753 PRK06753
hypothetical protein; Provisional
 51-433 6.02e-06

hypothetical protein; Provisional


Pssm-ID: 168661 [Multi-domain]  Cd Length: 373  Bit Score: 48.15  E-value: 6.02e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  51 VIISGGGMVGSAMAcslgmdpnlsekkILLLEAGHK-KVMDRLPdtystrvsSISPGSAtllsGIGAWEHITrmrykpyK 129
Cdd:PRK06753   3 IAIIGAGIGGLTAA-------------ALLQEQGHEvKVFEKNE--------SVKEVGA----GIGIGDNVI-------K 50

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 130 RMQVWDaCSDALITFDKEdlLDEMAYIVENDIVVAAITRQLDTLPENVQVKYKSKVVKYtwpmpHHAAESIPW------- 202
Cdd:PRK06753  51 KLGNHD-LAKGIKNAGQI--LSTMNLLDDKGTLLNKVKLKSNTLNVTLHRQTLIDIIKS-----YVKEDAIFTgkevtki 122

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 203 ------VKVTLANGETLQTKLLIGADGPNSMVRQKLGiPTVKWNYDQ----SAVVAVLHLSEPtenNVAWQRFLPTGPIA 272
Cdd:PRK06753 123 enetdkVTIHFADGESEAFDLCIGADGIHSKVRQSVN-ADSKVRYQGytcfRGLIDDIDLKLP---DCAKEYWGTKGRFG 198

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 273 MLPLSDTEssLVWstghhlaeelleldeesFVdAVNSAFWSNENQSDLIETAGALFRGALSAImpsegspRQLPPSVAGI 352
Cdd:PRK06753 199 IVPLLNNQ--AYW-----------------FI-TINAKERDPKYSSFGKPHLQAYFNHYPNEV-------REILDKQSET 251

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 353 GPKSRVMF---PLgighaSEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAAFNgkdlgaiQHLLEYETE 429
Cdd:PRK06753 252 GILHHDIYdlkPL-----KSFVYGRIVLLGDAAHATTPNMGQGAGQAMEDAIVLANCLNAYDFE-------KALQRYDKI 319


                 ....
gi 974088368 430 RQRH 433
Cdd:PRK06753 320 RVKH 323
PRK06834 PRK06834
hypothetical protein; Provisional
 203-409 6.12e-06

hypothetical protein; Provisional


Pssm-ID: 235870 [Multi-domain]  Cd Length: 488  Bit Score: 48.48  E-value: 6.12e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 203 VKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNYDQSAVVAVLHLSEPTENNV--------AWQRFLPTGPIAML 274
Cdd:PRK06834 133 VDVELSDGRTLRAQYLVGCDGGRSLVRKAAGIDFPGWDPTTSYLIAEVEMTEEPEWGVhrdalgihAFGRLEDEGPVRVM 212

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 275 PlsdTESSLVWSTghhlaeelleldeesfvdavnsafwsNENQSDLietagalfRGALSAIMPSE---GSPRQLppsvag 351
Cdd:PRK06834 213 V---TEKQVGATG--------------------------EPTLDDL--------REALIAVYGTDygiHSPTWI------ 249

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 974088368 352 igpkSRvmFPLGIGHASEYIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQ 409
Cdd:PRK06834 250 ----SR--FTDMARQAASYRDGRVLLAGDAAHVHSPVGGQGLNTGVQDAVNLGWKLAQ 301
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
56-249 6.82e-06

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 47.65  E-value: 6.82e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368  56 GGMVGSAMACSLGMdpnlSEKKILLLEAGhkkvmdRLPDtYSTRVSSISPGSATLLSGIGAWEHITRmrykPYKRMQVWd 135
Cdd:COG0644    1 AGPAGSAAARRLAR----AGLSVLLLEKG------SFPG-DKICGGGLLPRALEELEPLGLDEPLER----PVRGARFY- 64

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 136 ACSDALITFDKEDlldEMAYIVENDIVVAAITRQLdtLPENVQVKYKSKVVKYTWpmphHAAEsipwVKVTLANGETLQT 215
Cdd:COG0644   65 SPGGKSVELPPGR---GGGYVVDRARFDRWLAEQA--EEAGAEVRTGTRVTDVLR----DDGR----VVVRTGDGEEIRA 131

                        170       180       190
                 ....*....|....*....|....*....|....
gi 974088368 216 KLLIGADGPNSMVRQKLGIPTvKWNYDQSAVVAV 249
Cdd:COG0644  132 DYVVDADGARSLLARKLGLKR-RSDEPQDYALAI 164
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
374-459 9.26e-06

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 47.98  E-value: 9.26e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 374 RVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSqAAFNGKdlgAIQHLLE-YETERQRHNLPMMTVIDLMKRLYSTNA 452
Cdd:PRK06183 287 RVLLAGDAAHLMPPFAGQGMNSGIRDAANLAWKLA-AVLRGR---AGDALLDtYEQERRPHARAMIDLAVRLGRVICPTD 362


                 ....*..
gi 974088368 453 APVVLLR 459
Cdd:PRK06183 363 RLAAALR 369
PRK06847 PRK06847
hypothetical protein; Provisional
 203-411 1.39e-05

hypothetical protein; Provisional


Pssm-ID: 235874 [Multi-domain]  Cd Length: 375  Bit Score: 47.18  E-value: 1.39e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 203 VKVTLANGETLQTKLLIGADGPNSMVRQKLGIPTVKWNY-DQSAVVAVLHLSEPTENNVAWQRflPTGPIAMLPLSDTES 281
Cdd:PRK06847 140 VTVTFSDGTTGRYDLVVGADGLYSKVRSLVFPDEPEPEYtGQGVWRAVLPRPAEVDRSLMYLG--PTTKAGVVPLSEDLM 217

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 282 SLvwstghhlaeelleldeesFVDavnsafwSNENQSDLIETAgALFRgALSAIMPSEGSPrQLPPSVAGIGPKSRVMF- 360
Cdd:PRK06847 218 YL-------------------FVT-------EPRPDNPRIEPD-TLAA-LLRELLAPFGGP-VLQELREQITDDAQVVYr 268

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 974088368 361 PLGiGHASE--YIRHRVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQAA 411
Cdd:PRK06847 269 PLE-TLLVPapWHRGRVVLIGDAAHATTPHLAQGAGMAIEDAIVLAEELARHD 320
PRK07190 PRK07190
FAD-binding protein;
206-235 2.82e-05

FAD-binding protein;


Pssm-ID: 235955 [Multi-domain]  Cd Length: 487  Bit Score: 46.35  E-value: 2.82e-05
                         10        20        30
                 ....*....|....*....|....*....|
gi 974088368 206 TLANGETLQTKLLIGADGPNSMVRQKLGIP 235
Cdd:PRK07190 145 TLSNGERIQSRYVIGADGSRSFVRNHFNVP 174
PRK02106 PRK02106
choline dehydrogenase; Validated
 45-84 9.36e-05

choline dehydrogenase; Validated


Pssm-ID: 235000 [Multi-domain]  Cd Length: 560  Bit Score: 44.82  E-value: 9.36e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 974088368  45 KTEVYDVIISGGGMVGSAMACSLGMDPNlseKKILLLEAG 84
Cdd:PRK02106   2 TTMEYDYIIIGAGSAGCVLANRLSEDPD---VSVLLLEAG 38
BetA COG2303
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ...
 46-86 7.61e-04

Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441878 [Multi-domain]  Cd Length: 531  Bit Score: 42.12  E-value: 7.61e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 974088368  46 TEVYDVIISGGGMVGSAMACSLGMDPNLSekkILLLEAGHK 86
Cdd:COG2303    2 LEEYDYVIVGAGSAGCVLANRLSEDAGLR---VLLLEAGGR 39
PRK11445 PRK11445
FAD-binding protein;
173-236 3.50e-03

FAD-binding protein;


Pssm-ID: 183139 [Multi-domain]  Cd Length: 351  Bit Score: 39.66  E-value: 3.50e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 974088368 173 LPENVQVKYKSkVVKYTWPMPHHaaesipWVKVTLANGE--TLQTKLLIGADGPNSMVR----QKLGIPT 236
Cdd:PRK11445 109 IPASVEVYHNS-LCRKIWREDDG------YHVIFRADGWeqHITARYLVGADGANSMVRrhlyPDHQIRK 171
PRK06475 PRK06475
FAD-binding protein;
374-430 8.02e-03

FAD-binding protein;


Pssm-ID: 180582 [Multi-domain]  Cd Length: 400  Bit Score: 38.65  E-value: 8.02e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 974088368 374 RVALIGDAAHRVHPLAGQGANLGFGDVACLTQLLSQaafngKDLGAiqHLLEYETER 430
Cdd:PRK06475 293 RTIFLGDASHAVTPFAAQGAAMAIEDAAALAEALDS-----DDQSA--GLKRFDSVR 342
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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