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Conserved domains on  [gi|928040106|ref|XP_013868794|]
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PREDICTED: dnaJ homolog subfamily B member 6 isoform X1 [Austrofundulus limnaeus]

Protein Classification

J domain-containing protein( domain architecture ID 1001220)

J domain-containing protein similar to molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  1.10.287.110
Gene Ontology:  GO:0006457
PubMed:  9644977|8016869|15170475
SCOP:  4000605

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DnaJ_bact super family cl37091
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-132 1.79e-33

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


The actual alignment was detected with superfamily member TIGR02349:

Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 126.18  E-value: 1.79e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106    4 YYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDnkEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSggggggghf 83
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFN--------- 70

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 928040106   84 NHFGSSNFTFRnpedvfrefFGGRDPFADLfpDDHFDSFFGGGRSHQRS 132
Cdd:TIGR02349  71 GGGGGGGGGFN---------GFDIGFFGDF--GDIFGDFFGGGGGSGRR 108
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-132 1.79e-33

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 126.18  E-value: 1.79e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106    4 YYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDnkEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSggggggghf 83
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFN--------- 70

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 928040106   84 NHFGSSNFTFRnpedvfrefFGGRDPFADLfpDDHFDSFFGGGRSHQRS 132
Cdd:TIGR02349  71 GGGGGGGGGFN---------GFDIGFFGDF--GDIFGDFFGGGGGSGRR 108
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 4-135 1.84e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 126.41  E-value: 1.84e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   4 YYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNkEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGlsggggggghF 83
Cdd:PRK10767   6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGD-KEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAA----------F 74

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 928040106  84 NHFGSSNftfrnpedvfreFFGGRDPFADLFpDDHFDSFFGGGRSHQRSANQ 135
Cdd:PRK10767  75 EQGGGGG------------GFGGGGGFGDIF-GDIFGDIFGGGRGGGRQRAR 113
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 5.31e-29

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 106.02  E-value: 5.31e-29
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 928040106    3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNkEEAEKKFKELSEAYEVLSDENKRNIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGD-PEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 4-73 7.46e-28

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 105.55  E-value: 7.46e-28
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   4 YYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNkEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGL 73
Cdd:COG0484    2 YYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGD-PEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAE 70
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 4.41e-25

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 95.38  E-value: 4.41e-25
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106     2 VEYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNKEEAEKKFKELSEAYEVLSDENK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 2.43e-22

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 87.99  E-value: 2.43e-22
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNkEEAEKKFKELSEAYEVLSD 58
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-121 5.22e-22

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 95.66  E-value: 5.22e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNpdNKEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSgggggggh 82
Cdd:NF037946   6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVD-------- 75

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 928040106  83 fnhfGSSNFTFrNPEDVFREFFGGRDPfADLFPDDHFDS 121
Cdd:NF037946  76 ----GEGGFGF-DAFDVFSSFFETINK-SGAFLDDSVDE 108
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 4-132 1.79e-33

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 126.18  E-value: 1.79e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106    4 YYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDnkEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSggggggghf 83
Cdd:TIGR02349   2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFN--------- 70

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 928040106   84 NHFGSSNFTFRnpedvfrefFGGRDPFADLfpDDHFDSFFGGGRSHQRS 132
Cdd:TIGR02349  71 GGGGGGGGGFN---------GFDIGFFGDF--GDIFGDFFGGGGGSGRR 108
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 4-135 1.84e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 126.41  E-value: 1.84e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   4 YYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNkEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGlsggggggghF 83
Cdd:PRK10767   6 YYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGD-KEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAA----------F 74

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 928040106  84 NHFGSSNftfrnpedvfreFFGGRDPFADLFpDDHFDSFFGGGRSHQRSANQ 135
Cdd:PRK10767  75 EQGGGGG------------GFGGGGGFGDIF-GDIFGDIFGGGRGGGRQRAR 113
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 3-134 7.29e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 116.79  E-value: 7.29e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDnkEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSGGGGGGGH 82
Cdd:PRK14291   4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG 81

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 928040106  83 FNHFgsSNFTFRNPEDVFREFFGGRDpFADLFPDDHFDSffGGGRSHQRSAN 134
Cdd:PRK14291  82 QEGF--SDFGGGNIEDILEDVFDIFG-FGDIFGRRRATR--ERRKTYQRPVK 128
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 3-66 5.31e-29

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 106.02  E-value: 5.31e-29
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 928040106    3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNkEEAEKKFKELSEAYEVLSDENKRNIYD 66
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPGD-PEAEEKFKEINEAYEVLSDPEKRAIYD 63
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 4-73 7.46e-28

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 105.55  E-value: 7.46e-28
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   4 YYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNkEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGL 73
Cdd:COG0484    2 YYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGD-PEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAE 70
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 3-137 1.35e-27

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 110.65  E-value: 1.35e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNKEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSGGGGGGGH 82
Cdd:PRK14282   5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQETES 84

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 928040106  83 fnhfGSSNFtfrnpEDVFREffggrdpFADLFPDDHFDSFFGGGRSHQRSANQTR 137
Cdd:PRK14282  85 ----GGGFF-----EDIFKD-------FENIFNRDIFDIFFGERRTQEEQREYAR 123
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 3-132 1.18e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 108.01  E-value: 1.18e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDnkEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSgggggggh 82
Cdd:PRK14298   6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGID-------- 75

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 928040106  83 fNHFGSsnftfrnpEDVFREF-FGGrdpFADLfpddhFDSFFGGGRSHQRS 132
Cdd:PRK14298  76 -NQYSA--------EDIFRGAdFGG---FGDI-----FEMFFGGGGRRGRM 109
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 4-133 1.71e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 107.54  E-value: 1.71e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   4 YYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNKEEAEKKFKElSEAYEVLSDENKRNIYDRYGKEGLSggggggghf 83
Cdd:PRK14294   6 YYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEA-AEAYEVLSDPKKRGIYDQYGHEGLS--------- 75

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 928040106  84 nhfGSSNFTFRNPEDVFREffggrdpFADLFPDdhFDSFFGGGRSHQRSA 133
Cdd:PRK14294  76 ---GTGFSGFSGFDDIFSS-------FGDIFED--FFGFGGGRRGRSRTA 113
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 3-134 2.78e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 106.94  E-value: 2.78e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNKEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSGGGggggh 82
Cdd:PRK14290   4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGG----- 78

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 928040106  83 fNHFGSSNFT-FRNPEDVFREFFGGRdpfadlFPDDhfdsFFGGGRSHQRSAN 134
Cdd:PRK14290  79 -SNFNWDNFThFSDINDIFNQIFGGN------FGSD----FFSGFGNQQSTRN 120
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 3-135 4.14e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 106.85  E-value: 4.14e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNKEEAEKKFKeLSEAYEVLSDENKRNIYDRYGKEGLSGGGGGggh 82
Cdd:PRK14284   2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKE-VSEAYEVLSDAQKRESYDRYGKDGPFAGAGG--- 77

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 928040106  83 fnhFGSSNFTfrNPEDVFREFFGGrdpFADLF--PDDHFDSFFGG------GRSHQRSANQ 135
Cdd:PRK14284  78 ---FGGAGMG--NMEDALRTFMGA---FGGEFggGGSFFEGLFGGlgeafgMRGGPAGARQ 130
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 3-133 8.71e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 106.05  E-value: 8.71e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNkEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSGGGGGGGH 82
Cdd:PRK14281   4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDN-KEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGG 82

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 928040106  83 fNHFGSSNFTFRNPEDVFREFFGGRDPFADLFPDDHFDSFFGGGRSHQRSA 133
Cdd:PRK14281  83 -PGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASA 132
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 3-135 2.49e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 104.50  E-value: 2.49e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNkEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSGGGGGGGH 82
Cdd:PRK14277   6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGD-KEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQGG 84

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 928040106  83 FNH--FGSSNFTFRnpedvfrefFGGrdpFADLFpDDHFDSFFGGGRSHQRSANQ 135
Cdd:PRK14277  85 FGQggFGGGGFDFD---------FGG---FGDIF-EDIFGDFFGTGRRRAETGPQ 126
DnaJ smart00271
DnaJ molecular chaperone homology domain;
2-61 4.41e-25

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 95.38  E-value: 4.41e-25
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106     2 VEYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNKEEAEKKFKELSEAYEVLSDENK 61
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 3-105 2.21e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 101.74  E-value: 2.21e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNKEEAEKKFKElSEAYEVLSDENKRNIYDRYGKEGLSGGGGgggh 82
Cdd:PRK14301   5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEA-AEAYEVLRDAEKRARYDRFGHAGVNGNGG---- 79

                         90       100
                 ....*....|....*....|...
gi 928040106  83 FNHFGSSNFTFRNPEDVFREFFG 105
Cdd:PRK14301  80 FGGFSSAEDIFSHFSDIFGDLFG 102
PRK14280 PRK14280
molecular chaperone DnaJ;
3-137 7.52e-24

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 100.18  E-value: 7.52e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDnkEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSGGgggggh 82
Cdd:PRK14280   5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE--EGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQG------ 76

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 928040106  83 fnhFGSSNFtfrNPEDvfrefFGGRDPFADLfpddhFDSFFGGGrSHQRSANQTR 137
Cdd:PRK14280  77 ---FGGGGF---GGGD-----FGGGFGFEDI-----FSSFFGGG-GRRRDPNAPR 114
PRK14289 PRK14289
molecular chaperone DnaJ;
3-131 1.12e-23

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 99.91  E-value: 1.12e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNKEEAEKKFKElSEAYEVLSDENKRNIYDRYGKEGLSGGGGGGGh 82
Cdd:PRK14289   6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEA-AEAYDVLSDPDKRSRYDQFGHAGVGGAAGGGG- 83

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 928040106  83 fnhFGSSNFTFrnpEDVFREffggrdpFADLFpDDHFDSF-----FGGGRSHQR 131
Cdd:PRK14289  84 ---FSGEGMSM---EDIFSM-------FGDIF-GGHGGGFggfggFGGGGSQQR 123
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 3-137 2.24e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 98.91  E-value: 2.24e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNKEEAEKKFKElSEAYEVLSDENKRNIYDRYGkeglsgggggggH 82
Cdd:PRK14285   4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEA-TEAYEVLIDDNKRAQYDRFG------------H 70

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 928040106  83 FNHFGSSNFTfrnpedvfrEFFGGRDPFADLFPD--DHFDSFFGGGRSHQRSANQTR 137
Cdd:PRK14285  71 TAFEGGGGFE---------GFSGGFSGFSDIFEDfgDIFDSFFTGNRGQDKNRKHEK 118
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 3-134 1.72e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 96.43  E-value: 1.72e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDnkEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSGGGGGggh 82
Cdd:PRK14283   6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQE--- 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 928040106  83 fNHFGSSNFtfrnpEDVFREFFGGRDPFADLFPddhfdsfFGGGRSH--QRSAN 134
Cdd:PRK14283  81 -DIFNNINF-----EDIFQGFGFGIGNIFDMFG-------FGGGSRHgpQRGAD 121
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 3-58 2.43e-22

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 87.99  E-value: 2.43e-22
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNkEEAEKKFKELSEAYEVLSD 58
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 3-111 3.32e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 95.54  E-value: 3.32e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDnkEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSGGGG-GGG 81
Cdd:PRK14276   5 EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE--PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGgGAG 82

                         90       100       110
                 ....*....|....*....|....*....|....
gi 928040106  82 HFNHFGSSNFtFRNPEDVFREFFGG----RDPFA 111
Cdd:PRK14276  83 GFGGFDGSGG-FGGFEDIFSSFFGGggarRNPNA 115
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 3-106 5.18e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 95.12  E-value: 5.18e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDnkEEAEKKFKELSEAYEVLSDENKRNIYDrYGKEGLSGGGGGGgh 82
Cdd:PRK14278   4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVD-LGGDPLESAGGGG-- 78

                         90       100
                 ....*....|....*....|....
gi 928040106  83 fNHFGSSnftFRNPEDVFREFFGG 106
Cdd:PRK14278  79 -GGFGGG---FGGLGDVFEAFFGG 98
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-121 5.22e-22

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 95.66  E-value: 5.22e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNpdNKEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSgggggggh 82
Cdd:NF037946   6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRN--KAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVD-------- 75

                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 928040106  83 fnhfGSSNFTFrNPEDVFREFFGGRDPfADLFPDDHFDS 121
Cdd:NF037946  76 ----GEGGFGF-DAFDVFSSFFETINK-SGAFLDDSVDE 108
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 4-128 7.10e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 94.67  E-value: 7.10e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   4 YYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNKEEAEKKFKElSEAYEVLSDENKRNIYDRYGKEGLSGGGgggghf 83
Cdd:PRK14286   6 YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEA-TEAYEILRDPKKRQAYDQFGKAGVNAGA------ 78

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 928040106  84 NHFGSSNFTfrnpedvfreffggrdPFADLFPD--DHFDSFFGGGRS 128
Cdd:PRK14286  79 GGFGQGAYT----------------DFSDIFGDfgDIFGDFFGGGRG 109
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 3-62 4.75e-21

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 84.67  E-value: 4.75e-21
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNkEEAEKKFKELSEAYEVLSDENKR 62
Cdd:COG5407    1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGD-PKAEERFKEINEAYELLSDAEKR 59
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 3-114 5.46e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 90.77  E-value: 5.46e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDnkEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSGGGGGGGH 82
Cdd:PRK14299   5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP 82

                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 928040106  83 fNHFGSSNFTFRNPED---VFREFFGGR---DPFADLF 114
Cdd:PRK14299  83 -GPPGGGDFSGFNVGDfsdFFQQLFGGRggfGGFGDLF 119
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-67 1.23e-20

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 84.77  E-value: 1.23e-20
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 928040106   1 MVEYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNKEEAEKKFKELSEAYEVLSDENKRNIYDR 67
Cdd:COG2214    4 LKDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYDR 70
PRK14297 PRK14297
molecular chaperone DnaJ;
3-126 1.24e-20

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 91.38  E-value: 1.24e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNkEEAEKKFKELSEAYEVLSDENKRNIYDRYGkeglsgggggGGH 82
Cdd:PRK14297   5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGN-KEAEEKFKEINEAYQVLSDPQKKAQYDQFG----------TAD 73

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 928040106  83 FNHFGSSNFTfrnpedvfreFFGGRDPFADLFPDDHFDSFFGGG 126
Cdd:PRK14297  74 FNGAGGFGSG----------GFGGFDFSDMGGFGDIFDSFFGGG 107
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 3-127 1.79e-20

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 91.04  E-value: 1.79e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDnkeeaEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSgggggggh 82
Cdd:PTZ00037  29 KLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLE-------- 95

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 928040106  83 fnhfgssnftfrnpedvfreffgGRDPFADlfPDDHFDSFFGGGR 127
Cdd:PTZ00037  96 -----------------------GGEQPAD--ASDLFDLIFGGGR 115
PRK14293 PRK14293
molecular chaperone DnaJ;
1-136 2.81e-20

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 90.05  E-value: 2.81e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   1 MVEYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDnkEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSgggggg 80
Cdd:PRK14293   2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE--PGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVS------ 73

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 928040106  81 ghfnhfGSSNFtfrnpedvfrEFFGGRDPFADLFpdDHFDSFFGGGRSHQRSANQT 136
Cdd:PRK14293  74 ------GAAGF----------PDMGDMGGFADIF--ETFFSGFGGAGGQGGRRRRR 111
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 1-133 3.61e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 89.95  E-value: 3.61e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   1 MVEYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDnkEEAEKKFKELSEAYEVLSDENKRNIYDRYGkeglSGGGGGG 80
Cdd:PRK14292   1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFG----TAPGAGM 74

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 928040106  81 GHFNHFGSSNFtfrNPEDVFREFFGGrdpfadlfpddhfdSFFGGGRSHQRSA 133
Cdd:PRK14292  75 PGGDPFGGMGF---DPMDIFEQLFGG--------------AGFGGGRGRRGPA 110
PRK14279 PRK14279
molecular chaperone DnaJ;
3-137 6.11e-17

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 80.55  E-value: 6.11e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNkEEAEKKFKELSEAYEVLSDENKRNIYDRYGK--EGLSGGGGGG 80
Cdd:PRK14279  10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGD-PAAEERFKAVSEAHDVLSDPAKRKEYDETRRlfAGGGFGGRRF 88

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 928040106  81 GHFNHFGSSNFTFRNPEDVFREFFGGRDPFADLFPDDHFDSFFGGGRSHQRSANQTR 137
Cdd:PRK14279  89 DGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRR 145
PRK14288 PRK14288
molecular chaperone DnaJ;
2-105 7.03e-17

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 80.50  E-value: 7.03e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   2 VEYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNkEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSGGGGGGG 81
Cdd:PRK14288   3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGD-KEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQS 81

                         90       100
                 ....*....|....*....|....
gi 928040106  82 HFNHFgssnftFRNPEDVFREFFG 105
Cdd:PRK14288  82 DFSDF------FEDLGSFFEDAFG 99
PRK14295 PRK14295
molecular chaperone DnaJ;
3-66 2.18e-16

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 79.12  E-value: 2.18e-16
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNkEEAEKKFKELSEAYEVLSDENKRNIYD 66
Cdd:PRK14295  10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGD-AKAEERFKEISEAYDVLSDEKKRKEYD 72
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 3-137 2.34e-16

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 78.90  E-value: 2.34e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNpdNKEEAEKKFKELSEAYEVLSDENKRNIYDRYGKEGLSGGGGGGGH 82
Cdd:PRK14300   4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTT--DAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGGG 81

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 928040106  83 FNHFGSSnftfrnpEDVfreffggRDPFADLFPDdhfdsFFGGGRSHQRSANQTR 137
Cdd:PRK14300  82 GNHGGFH-------PDI-------NDIFGDFFSD-----FMGGSRRSRPTSSKVR 117
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 3-135 1.14e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 76.91  E-value: 1.14e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNkeEAEKKFKELSEAYEVLSDENKRNIYDRYGkeglsgggggggH 82
Cdd:PRK14296   5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSP--DAHDKMVEINEAADVLLDKDKRKQYDQFG------------H 70

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 928040106  83 FNHFGSSNFT--FRNPEDVFREF--FGGRDpFADLFPDdhfdsFFGGGRSHQRSANQ 135
Cdd:PRK14296  71 AAFDGSSGFSsnFGDFEDLFSNMgsSGFSS-FTNIFSD-----FFGSNKSDYQRSTK 121
PRK10266 PRK10266
curved DNA-binding protein;
3-133 3.70e-13

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 68.69  E-value: 3.70e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPD--KNPDnkeeAEKKFKELSEAYEVLSDENKRNIYDRYGKEglSGGGGGG 80
Cdd:PRK10266   5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEPD----AEARFKEVAEAWEVLSDEQRRAEYDQLWQH--RNDPQFN 78

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 928040106  81 GHFNHFGSSNFtfrNPEDVfreffggrdpfadlfpDDHFDSFFG--GGRSHQRSA 133
Cdd:PRK10266  79 RQFQHGDGQSF---NAEDF----------------DDIFSSIFGqhARQSRQRPA 114
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 3-111 1.31e-12

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 67.73  E-value: 1.31e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106   3 EYYQILGVRKNATQEDIKKAYRKLALKWHPD--KNPDnkeeAEKKFKELSEAYEVLSDENKRNIYDRYGKeglsggGGGG 80
Cdd:PRK14287   5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDvnKAPD----AEDKFKEVKEAYDTLSDPQKKAHYDQFGH------TDPN 74

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 928040106  81 GHFNHFGSSNFTfrNPEDVFREFFGG----RDPFA 111
Cdd:PRK14287  75 QGFGGGGAGDFG--GFSDIFDMFFGGgggrRNPNA 107
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 4-73 3.25e-09

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 58.26  E-value: 3.25e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 928040106    4 YYQILGVRKNATQEDIKKAYRKLALKWHPDKNPDNKEEAEKKFkeLSEAYEVLSDENKRNIYDRYGKEGL 73
Cdd:PTZ00341  575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKK--INEAYQILGDIDKKKMYNKFGYDGI 642
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-34 6.87e-08

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 49.02  E-value: 6.87e-08
                         10        20        30
                 ....*....|....*....|....*....|....
gi 928040106   1 MVEYYQILGVRKNATQEDIKKAYRKLALKWHPDK 34
Cdd:COG1076    3 LDDAFELLGLPPDADDAELKRAYRKLQREHHPDR 36
djlA PRK09430
co-chaperone DjlA;
5-34 1.57e-06

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 48.65  E-value: 1.57e-06
                         10        20        30
                 ....*....|....*....|....*....|
gi 928040106   5 YQILGVRKNATQEDIKKAYRKLALKWHPDK 34
Cdd:PRK09430 203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDK 232
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 2-66 5.52e-05

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 44.25  E-value: 5.52e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 928040106   2 VEYYQILGV---RKNATQEDIKKAYRKLALKWHPDKNPDNKEEAEKKFKEL-SEAYEVLSDENKRNIYD 66
Cdd:COG5269   43 VDLYALLGLskyRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLiQKAREVLGDRKLRLQYD 111
hscB PRK01356
co-chaperone HscB; Provisional
 1-65 9.19e-04

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 39.47  E-value: 9.19e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 928040106   1 MVEYYQILGVRK--NATQEDIKKAYRKLALKWHPD--KNPDNKEEAEKKFKELSEAYEVLSDENKRNIY 65
Cdd:PRK01356   1 MQNYFQLLGLPQeyNIDLKILEKQYFAMQVKYHPDkaKTLQEKEQNLIIASELNNAYSTLKDALKRAEY 69
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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