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Conserved domains on  [gi|919030710|ref|XP_013399016|]
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dnaJ homolog subfamily B member 6 isoform X6 [Lingula anatina]

Protein Classification

J domain-containing protein( domain architecture ID 1001220)

J domain-containing protein similar to molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  1.10.287.110
Gene Ontology:  GO:0006457
PubMed:  9644977|8016869|15170475
SCOP:  4000605

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DnaJ_bact super family cl37091
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 5-106 3.07e-32

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


The actual alignment was detected with superfamily member TIGR02349:

Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 121.55  E-value: 3.07e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710    5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrkEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGLNDADIDFGG 84
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGG 78

                          90       100
                  ....*....|....*....|...
gi 919030710   85 YDTGFHFT-FRDPEEVFREFFGG 106
Cdd:TIGR02349  79 GFNGFDIGfFGDFGDIFGDFFGG 101
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 5-106 3.07e-32

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 121.55  E-value: 3.07e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710    5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrkEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGLNDADIDFGG 84
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGG 78

                          90       100
                  ....*....|....*....|...
gi 919030710   85 YDTGFHFT-FRDPEEVFREFFGG 106
Cdd:TIGR02349  79 GFNGFDIGfFGDFGDIFGDFFGG 101
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 1-107 5.25e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 121.02  E-value: 5.25e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   1 MPSLDYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrKEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGLNDADI 80
Cdd:PRK10767   1 MAKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPG-DKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGG 79

                         90       100
                 ....*....|....*....|....*....
gi 919030710  81 D--FGGYDtGFHFTFRDpeeVFREFFGGR 107
Cdd:PRK10767  80 GggFGGGG-GFGDIFGD---IFGDIFGGG 104
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 5-81 3.18e-26

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 100.16  E-value: 3.18e-26
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrKEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGLNDADID 81
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPG-DPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATE 76
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 5-68 5.28e-26

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 96.77  E-value: 5.28e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 919030710    5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrKEEAEKKFKEISEAYEVLSDAKKRDLYD 68
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPG-DPEAEEKFKEINEAYEVLSDPEKRAIYD 63
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
5-106 8.89e-24

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 99.51  E-value: 8.89e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDRKEEAEKKFkeISEAYEVLSDAKKRDLYDRYGKDGLNDADidfgg 84
Cdd:NF037946   6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPDAAEIFAE--INEAYEVLSNPEKRANYDKYGHDGVDGEG----- 78

                         90       100
                 ....*....|....*....|..
gi 919030710  85 ydtGFHFtfrDPEEVFREFFGG 106
Cdd:NF037946  79 ---GFGF---DAFDVFSSFFET 94
DnaJ smart00271
DnaJ molecular chaperone homology domain;
5-63 1.26e-22

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 88.06  E-value: 1.26e-22
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 919030710     5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDRKEEAEKKFKEISEAYEVLSDAKK 63
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 5-60 1.10e-20

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 82.59  E-value: 1.10e-20
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDRkEEAEKKFKEISEAYEVLSD 60
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
 5-106 3.07e-32

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 121.55  E-value: 3.07e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710    5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrkEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGLNDADIDFGG 84
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGG 78

                          90       100
                  ....*....|....*....|...
gi 919030710   85 YDTGFHFT-FRDPEEVFREFFGG 106
Cdd:TIGR02349  79 GFNGFDIGfFGDFGDIFGDFFGG 101
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
 1-107 5.25e-32

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 121.02  E-value: 5.25e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   1 MPSLDYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrKEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGLNDADI 80
Cdd:PRK10767   1 MAKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPG-DKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGG 79

                         90       100
                 ....*....|....*....|....*....
gi 919030710  81 D--FGGYDtGFHFTFRDpeeVFREFFGGR 107
Cdd:PRK10767  80 GggFGGGG-GFGDIFGD---IFGDIFGGG 104
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
 5-81 3.18e-26

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 100.16  E-value: 3.18e-26
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrKEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGLNDADID 81
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPG-DPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAELLLATE 76
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
 5-68 5.28e-26

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 96.77  E-value: 5.28e-26
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 919030710    5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrKEEAEKKFKEISEAYEVLSDAKKRDLYD 68
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNPG-DPEAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
 5-105 8.16e-25

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 101.38  E-value: 8.16e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDRKEEAEKKFKEiSEAYEVLSDAKKRDLYDRYGKDGLNDAdiDFGG 84
Cdd:PRK14294   5 DYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEA-AEAYEVLSDPKKRGIYDQYGHEGLSGT--GFSG 81

                         90       100
                 ....*....|....*....|.
gi 919030710  85 YdTGFHFTFRDPEEVFREFFG 105
Cdd:PRK14294  82 F-SGFDDIFSSFGDIFEDFFG 101
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
 4-105 3.95e-24

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 99.92  E-value: 3.95e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   4 LDYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrKEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGLNDADIDFG 83
Cdd:PRK14284   1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPG-DAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFG 79

                         90       100
                 ....*....|....*....|..
gi 919030710  84 GYDtgfhftFRDPEEVFREFFG 105
Cdd:PRK14284  80 GAG------MGNMEDALRTFMG 95
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
5-106 8.89e-24

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 99.51  E-value: 8.89e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDRKEEAEKKFkeISEAYEVLSDAKKRDLYDRYGKDGLNDADidfgg 84
Cdd:NF037946   6 DYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPDAAEIFAE--INEAYEVLSNPEKRANYDKYGHDGVDGEG----- 78

                         90       100
                 ....*....|....*....|..
gi 919030710  85 ydtGFHFtfrDPEEVFREFFGG 106
Cdd:NF037946  79 ---GFGF---DAFDVFSSFFET 94
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
 5-111 3.08e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 97.53  E-value: 3.08e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDRKEEAEKKFkeISEAYEVLSDAKKRDLYDRYGKDGLNDADIDFGG 84
Cdd:PRK14291   4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKE--INEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQG 81

                         90       100       110
                 ....*....|....*....|....*....|
gi 919030710  85 YDTGFHFTFRDPEEVFREF---FGGRDPFE 111
Cdd:PRK14291  82 QEGFSDFGGGNIEDILEDVfdiFGFGDIFG 111
PRK14280 PRK14280
molecular chaperone DnaJ;
1-109 5.08e-23

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 96.71  E-value: 5.08e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   1 MPSLDYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNpdRKEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGLND--A 78
Cdd:PRK14280   1 MAKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDIN--KEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQgfG 78

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 919030710  79 DIDFGGYDTGFHFTFrdpEEVFREFFGG----RDP 109
Cdd:PRK14280  79 GGGFGGGDFGGGFGF---EDIFSSFFGGggrrRDP 110
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
 1-109 5.87e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 96.70  E-value: 5.87e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   1 MPSLDYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNpdRKEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGLN---- 76
Cdd:PRK14276   1 MNNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDIN--KEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANggfg 78

                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 919030710  77 DADIDFGGYDTGFHFTfrDPEEVFREFFGG----RDP 109
Cdd:PRK14276  79 GGAGGFGGFDGSGGFG--GFEDIFSSFFGGggarRNP 113
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
 1-105 6.29e-23

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 96.35  E-value: 6.29e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   1 MPSLDYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDRKEEAEKKFKEiSEAYEVLSDAKKRDLYDRYGKDGLNDadi 80
Cdd:PRK14301   1 MSQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEA-AEAYEVLRDAEKRARYDRFGHAGVNG--- 76

                         90       100
                 ....*....|....*....|....*...
gi 919030710  81 dfGGYDTGFHFT---FRDPEEVFREFFG 105
Cdd:PRK14301  77 --NGGFGGFSSAediFSHFSDIFGDLFG 102
DnaJ smart00271
DnaJ molecular chaperone homology domain;
5-63 1.26e-22

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 88.06  E-value: 1.26e-22
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 919030710     5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDRKEEAEKKFKEISEAYEVLSDAKK 63
Cdd:smart00271   2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
 5-106 1.35e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 95.69  E-value: 1.35e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrkEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGLND----ADI 80
Cdd:PRK14298   6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNqysaEDI 83

                         90       100
                 ....*....|....*....|....*.
gi 919030710  81 dFGGYDtgfhftFRDPEEVFREFFGG 106
Cdd:PRK14298  84 -FRGAD------FGGFGDIFEMFFGG 102
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
 5-106 1.66e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 95.38  E-value: 1.66e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDRKEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKdglndadIDFGG 84
Cdd:PRK14290   4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGT-------VDFGA 76

                         90       100
                 ....*....|....*....|....*.
gi 919030710  85 YDTGFH---FT-FRDPEEVFREFFGG 106
Cdd:PRK14290  77 GGSNFNwdnFThFSDINDIFNQIFGG 102
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
 1-106 2.16e-22

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 95.06  E-value: 2.16e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   1 MPSLDYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDRKEEAEKKFKEiSEAYEVLSDAKKRDLYDRYGKDGLNDADI 80
Cdd:PRK14286   1 MSERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEA-TEAYEILRDPKKRQAYDQFGKAGVNAGAG 79

                         90       100
                 ....*....|....*....|....*..
gi 919030710  81 DFG-GYDTGFHFTFRDPEEVFREFFGG 106
Cdd:PRK14286  80 GFGqGAYTDFSDIFGDFGDIFGDFFGG 106
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
 5-106 1.31e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 92.81  E-value: 1.31e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrkEEAEKKFKEISEAYEVLSDAKKRDLYDrYGKDGLNDAdidfGG 84
Cdd:PRK14278   4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVD-LGGDPLESA----GG 76

                         90       100
                 ....*....|....*....|..
gi 919030710  85 YDTGFHFTFRDPEEVFREFFGG 106
Cdd:PRK14278  77 GGGGFGGGFGGLGDVFEAFFGG 98
PRK14297 PRK14297
molecular chaperone DnaJ;
1-106 1.55e-21

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 92.54  E-value: 1.55e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   1 MPSLDYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrKEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGLNDA-D 79
Cdd:PRK14297   1 MASKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKG-NKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAgG 79

                         90       100
                 ....*....|....*....|....*..
gi 919030710  80 IDFGGYDTGFHFTFRDPEEVFREFFGG 106
Cdd:PRK14297  80 FGSGGFGGFDFSDMGGFGDIFDSFFGG 106
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
 1-111 3.88e-21

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 91.39  E-value: 3.88e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   1 MPSLDYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDRKEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGlnDADI 80
Cdd:PRK14282   1 REKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVG--EQPP 78

                         90       100       110
                 ....*....|....*....|....*....|...
gi 919030710  81 DFGGYDTGFHFtfrdpEEVFREF--FGGRDPFE 111
Cdd:PRK14282  79 YQETESGGGFF-----EDIFKDFenIFNRDIFD 106
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
 5-106 1.03e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 90.64  E-value: 1.03e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrKEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGL-NDADIDFG 83
Cdd:PRK14281   4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPD-NKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVgSSAASGGG 82

                         90       100
                 ....*....|....*....|...
gi 919030710  84 GYDTGFHFTFRDPEEVFREFFGG 106
Cdd:PRK14281  83 PGYGGGGGDFNDIFSAFNDMFGG 105
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
 5-60 1.10e-20

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 82.59  E-value: 1.10e-20
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDRkEEAEKKFKEISEAYEVLSD 60
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
 4-106 1.21e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 89.95  E-value: 1.21e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   4 LDYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDRkeEAEKKFKEISEAYEVLSDAKKRDLYDRYG---KDGLNDADI 80
Cdd:PRK14292   2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEK--GAAEKFAQINEAYAVLSDAEKRAHYDRFGtapGAGMPGGDP 79

                         90       100
                 ....*....|....*....|....*.
gi 919030710  81 dFGGydTGFhftfrDPEEVFREFFGG 106
Cdd:PRK14292  80 -FGG--MGF-----DPMDIFEQLFGG 97
PRK14289 PRK14289
molecular chaperone DnaJ;
5-106 4.07e-20

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 88.73  E-value: 4.07e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrKEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGLNDA--DIDF 82
Cdd:PRK14289   6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPG-DKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAagGGGF 84

                         90       100
                 ....*....|....*....|....
gi 919030710  83 GGYDTGFHFTFRDPEEVFREFFGG 106
Cdd:PRK14289  85 SGEGMSMEDIFSMFGDIFGGHGGG 108
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
 1-105 7.33e-20

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 87.93  E-value: 7.33e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   1 MPSLDYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrKEEAEKKFKEISEAYEVLSDAKKRDLYDRYG-----KDGL 75
Cdd:PRK14277   2 AAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPG-DKEAEQKFKEINEAYEILSDPQKRAQYDQFGhaafdPGGF 80

                         90       100       110
                 ....*....|....*....|....*....|.
gi 919030710  76 NDADIDFGGYDTGFH-FTFRDPEEVFREFFG 105
Cdd:PRK14277  81 GQGGFGQGGFGGGGFdFDFGGFGDIFEDIFG 111
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
 6-106 7.48e-19

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 85.26  E-value: 7.48e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   6 YYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrkeeaEKKFKEISEAYEVLSDAKKRDLYDRYGKDGLNdadidfGGY 85
Cdd:PTZ00037  30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLE------GGE 98

                         90       100
                 ....*....|....*....|.
gi 919030710  86 DTGfhftfrDPEEVFREFFGG 106
Cdd:PTZ00037  99 QPA------DASDLFDLIFGG 113
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
1-69 1.15e-18

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 78.61  E-value: 1.15e-18
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   1 MPSL-DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDRKEEAEKKFKEISEAYEVLSDAKKRDLYDR 69
Cdd:COG2214    1 MPDLkDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELKALAEELFQRLNEAYEVLSDPERRAEYDR 70
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
 5-64 1.65e-18

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 77.35  E-value: 1.65e-18
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDRkEEAEKKFKEISEAYEVLSDAKKR 64
Cdd:COG5407    1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKGD-PKAEERFKEINEAYELLSDAEKR 59
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
 5-104 7.04e-18

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 83.32  E-value: 7.04e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710    5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrkEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGLNDADidfgg 84
Cdd:TIGR03835   3 DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA--PDAASIFAEINEANDVLSNPKKRANYDKYGHDGVDRED----- 75

                          90       100
                  ....*....|....*....|
gi 919030710   85 ydtGFHFtfrDPeEVFREFF 104
Cdd:TIGR03835  76 ---DFDF---QA-DVFNSFF 88
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
 5-107 1.40e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 81.19  E-value: 1.40e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDRKEEAEKKFKEiSEAYEVLSDAKKRDLYDRYGKDGLnDADIDFGG 84
Cdd:PRK14285   4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEA-TEAYEVLIDDNKRAQYDRFGHTAF-EGGGGFEG 81

                         90       100
                 ....*....|....*....|....*.
gi 919030710  85 YDTGFH-FT--FRDPEEVFREFFGGR 107
Cdd:PRK14285  82 FSGGFSgFSdiFEDFGDIFDSFFTGN 107
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
 5-106 2.23e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 81.02  E-value: 2.23e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrkEEAEKKFKEISEAYEVLSDAKKRDLYDRYGK---DGLNDADI- 80
Cdd:PRK14283   6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHagmDGFSQEDIf 83

                         90       100
                 ....*....|....*....|....*....
gi 919030710  81 ---DFGGYDTGFHFTFRDPEEVFRefFGG 106
Cdd:PRK14283  84 nniNFEDIFQGFGFGIGNIFDMFG--FGG 110
PRK14293 PRK14293
molecular chaperone DnaJ;
5-106 2.58e-17

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 80.80  E-value: 2.58e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrkEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGLNDAdidfGG 84
Cdd:PRK14293   4 DYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE--PGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGA----AG 77

                         90       100
                 ....*....|....*....|...
gi 919030710  85 Y-DTGFHFTFRDpeeVFREFFGG 106
Cdd:PRK14293  78 FpDMGDMGGFAD---IFETFFSG 97
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
 1-110 2.62e-17

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 79.60  E-value: 2.62e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   1 MPSLDYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrkEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGLNDA-- 78
Cdd:PRK14299   1 MAYKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGwq 78

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 919030710  79 --------DIDFGGYDTGfhftfrDPEEVFREFFGGRDPF 110
Cdd:PRK14299  79 gpppgppgGGDFSGFNVG------DFSDFFQQLFGGRGGF 112
PRK14288 PRK14288
molecular chaperone DnaJ;
4-105 1.52e-16

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 78.58  E-value: 1.52e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   4 LDYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrKEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGLNDAdidfG 83
Cdd:PRK14288   3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAG-DKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQA----G 77

                         90       100
                 ....*....|....*....|..
gi 919030710  84 GYDTGFHFTFRDPEEVFREFFG 105
Cdd:PRK14288  78 ASQSDFSDFFEDLGSFFEDAFG 99
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
 3-104 3.37e-15

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 74.67  E-value: 3.37e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   3 SLDYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNpdRKEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKDGL-NDADID 81
Cdd:PRK14300   2 SQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTT--DAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFqNQQSRG 79

                         90       100
                 ....*....|....*....|...
gi 919030710  82 FGGYDTGFHftfRDPEEVFREFF 104
Cdd:PRK14300  80 GGGNHGGFH---PDINDIFGDFF 99
PRK14295 PRK14295
molecular chaperone DnaJ;
5-68 4.42e-15

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 74.11  E-value: 4.42e-15
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrKEEAEKKFKEISEAYEVLSDAKKRDLYD 68
Cdd:PRK14295  10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKG-DAKAEERFKEISEAYDVLSDEKKRKEYD 72
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
 1-105 4.92e-14

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 71.13  E-value: 4.92e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   1 MPSLDYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNpdRKEEAEKKFKEISEAYEVLSDAKKRDLYDRYGK---DGLND 77
Cdd:PRK14296   1 MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLN--KSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHaafDGSSG 78

                         90       100       110
                 ....*....|....*....|....*....|..
gi 919030710  78 ADIDFGGYDTGF----HFTFRDPEEVFREFFG 105
Cdd:PRK14296  79 FSSNFGDFEDLFsnmgSSGFSSFTNIFSDFFG 110
PRK14279 PRK14279
molecular chaperone DnaJ;
5-88 1.58e-13

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 69.76  E-value: 1.58e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNPDrKEEAEKKFKEISEAYEVLSDAKKRDLYD---------RYGKdGL 75
Cdd:PRK14279  10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPG-DPAAEERFKAVSEAHDVLSDPAKRKEYDetrrlfaggGFGG-RR 87

                         90
                 ....*....|...
gi 919030710  76 NDADIDFGGYDTG 88
Cdd:PRK14279  88 FDGGGGFGGFGTG 100
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
 1-106 1.62e-13

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 69.65  E-value: 1.62e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   1 MPSLDYYDVLEVSRSAPDAEIKKAYKKMALRWHPDKNpdRKEEAEKKFKEISEAYEVLSDAKKRDLYDRYGKdglNDADI 80
Cdd:PRK14287   1 MSKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVN--KAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGH---TDPNQ 75

                         90       100
                 ....*....|....*....|....*.
gi 919030710  81 DFGGYDTGFHFTFRDpeeVFREFFGG 106
Cdd:PRK14287  76 GFGGGGAGDFGGFSD---IFDMFFGG 98
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
1-66 5.38e-09

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 51.72  E-value: 5.38e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 919030710   1 MPSLDYYDVLEVSRSAPDAEIKKAYKKMALRWHPDK-----NPDRKEEAEKKFKEISEAYEVLSDAKKRDL 66
Cdd:COG1076    1 MQLDDAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaglPEEEQRLALQKAAAINEAYETLKDPRGIDL 71
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
 1-75 5.39e-09

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 56.72  E-value: 5.39e-09
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 919030710    1 MPSLDYYDVLEVSRSAPDAEIKKAYKKMALRWHPdknPDRKEEAEKKF-KEISEAYEVLSDAKKRDLYDRYGKDGL 75
Cdd:PTZ00341  570 IPDTLFYDILGVGVNADMKEISERYFKLAENYYP---PKRSGNEGFHKfKKINEAYQILGDIDKKKMYNKFGYDGI 642
PRK10266 PRK10266
curved DNA-binding protein;
5-105 1.24e-08

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 54.83  E-value: 1.24e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   5 DYYDVLEVSRSAPDAEIKKAYKKMALRWHPD--KNPDrkeeAEKKFKEISEAYEVLSDAKKRDLYDRYgkdGLNDADIDF 82
Cdd:PRK10266   5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDvsKEPD----AEARFKEVAEAWEVLSDEQRRAEYDQL---WQHRNDPQF 77

                         90       100
                 ....*....|....*....|....*.
gi 919030710  83 G---GYDTGFHFTFRDPEEVFREFFG 105
Cdd:PRK10266  78 NrqfQHGDGQSFNAEDFDDIFSSIFG 103
djlA PRK09430
co-chaperone DjlA;
2-36 3.79e-06

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 47.11  E-value: 3.79e-06
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 919030710   2 PSL-DYYDVLEVSRSAPDAEIKKAYKKMALRWHPDK 36
Cdd:PRK09430 197 PTLeDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDK 232
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 5-101 2.11e-04

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 42.33  E-value: 2.11e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 919030710   5 DYYDVLEVS--RSAPDAE-IKKAYKKMALRWHPDKNPDRKEEAEKKFKE-ISEAYEVLSDAKKRDLYDRygkdglNDADI 80
Cdd:COG5269   44 DLYALLGLSkyRTKAIPPqILKAHKKKVYKYHPDKTAAGGNKGCDEFFKlIQKAREVLGDRKLRLQYDS------NDFDA 117

                         90       100
                 ....*....|....*....|..
gi 919030710  81 DFGGYDTGFHFTFRDP-EEVFR 101
Cdd:COG5269  118 DVPPPRIYTPDEFFEVwEPVFE 139
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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