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Conserved domains on  [gi|813199250|ref|XP_012209196|]
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hypothetical protein SPRG_14632 [Saprolegnia parasitica CBS 223.65]

Protein Classification

multicopper oxidase family protein( domain architecture ID 11450234)

multicopper oxidase family protein couples the one-electron oxidation of four substrate molecules to the four electron reductive cleavage of the O-O bond of dioxygen

CATH:  2.60.40.420
EC:  1.-.-.-
SCOP:  4002203

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
SufI COG2132
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and ...
63-561 3.58e-71

Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA) [Cell cycle control, cell division, chromosome partitioning, Inorganic ion transport and metabolism, Cell wall/membrane/envelope biogenesis;


:

Pssm-ID: 441735 [Multi-domain]  Cd Length: 423  Bit Score: 234.44  E-value: 3.58e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  63 SLPSPPVYKShNGVLEITLTVQTA--RFTNGPVAfNTRSYNGMFPGPTLCAKPGDTLRITLINQLemdapseglhmntlr 140
Cdd:COG2132    1 PLPIPPLLES-GGGREYELTAQPAtvELLPGKPT-TVWGYNGQYPGPTIRVREGDRVRVRVTNRL--------------- 63
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 141 dPNTTNIHFHGMHVsPSGVADNVMRALKPGESMEVIVKIPddHPLGVYHYHPHHHGSVFLQMGGGMVGAISIQDSVDDV- 219
Cdd:COG2132   64 -PEPTTVHWHGLRV-PNAMDGVPGDPIAPGETFTYEFPVP--QPAGTYWYHPHTHGSTAEQVYRGLAGALIVEDPEEDLp 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 220 ----DNVLVLQAYGFKGgmlgnligaanvskstlpiDAQLTNMSHKRVSDAFPDYqprfsapataypsfYTVNGQYHPRL 295
Cdd:COG2132  140 rydrDIPLVLQDWRLDD-------------------DGQLLYPMDAAMGGRLGDT--------------LLVNGRPNPTL 186
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 296 TLHDGERKLFRLINAGPTQIVELSVP-GCDVEVFAKDVFP--PAETKPEFIIvSPGARVAFTVQChldGRPMGLFPLVSS 372
Cdd:COG2132  187 EVRPGERVRLRLLNASNARIYRLALSdGRPFTVIATDGGLlpAPVEVDELLL-APGERADVLVDF---SADPGEEVTLAN 262
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 373 PHSRSAAYmgrltdvyhgVLGVFDV--RATSSPVPALTLPrsntLRDLrgitDADEPIERFHVTFSSGPPAMrdgamykT 450
Cdd:COG2132  263 PFEGRSGR----------ALLTLRVtgAAASAPLPANLAP----LPDL----EDREAVRTRELVLTGGMAGY-------V 317
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 451 YYMNGMLFDPN-VRYKMKLGQLYEWTLENvLSAEekNHPFHMHTNPFQIVSSshgNGLDHSIGDWRDTITLPFGGNVTIR 529
Cdd:COG2132  318 WTINGKAFDPDrPDLTVKLGERERWTLVN-DTMM--PHPFHLHGHQFQVLSR---NGKPPPEGGWKDTVLVPPGETVRIL 391
                        490       500       510
                 ....*....|....*....|....*....|..
gi 813199250 530 FRPVDFTGLIAAHCHILGHSDAGMLMLIEIQP 561
Cdd:COG2132  392 FRFDNYPGDWMFHCHILEHEDAGMMGQFEVVP 423
 
Name Accession Description Interval E-value
SufI COG2132
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and ...
63-561 3.58e-71

Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA) [Cell cycle control, cell division, chromosome partitioning, Inorganic ion transport and metabolism, Cell wall/membrane/envelope biogenesis;


Pssm-ID: 441735 [Multi-domain]  Cd Length: 423  Bit Score: 234.44  E-value: 3.58e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  63 SLPSPPVYKShNGVLEITLTVQTA--RFTNGPVAfNTRSYNGMFPGPTLCAKPGDTLRITLINQLemdapseglhmntlr 140
Cdd:COG2132    1 PLPIPPLLES-GGGREYELTAQPAtvELLPGKPT-TVWGYNGQYPGPTIRVREGDRVRVRVTNRL--------------- 63
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 141 dPNTTNIHFHGMHVsPSGVADNVMRALKPGESMEVIVKIPddHPLGVYHYHPHHHGSVFLQMGGGMVGAISIQDSVDDV- 219
Cdd:COG2132   64 -PEPTTVHWHGLRV-PNAMDGVPGDPIAPGETFTYEFPVP--QPAGTYWYHPHTHGSTAEQVYRGLAGALIVEDPEEDLp 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 220 ----DNVLVLQAYGFKGgmlgnligaanvskstlpiDAQLTNMSHKRVSDAFPDYqprfsapataypsfYTVNGQYHPRL 295
Cdd:COG2132  140 rydrDIPLVLQDWRLDD-------------------DGQLLYPMDAAMGGRLGDT--------------LLVNGRPNPTL 186
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 296 TLHDGERKLFRLINAGPTQIVELSVP-GCDVEVFAKDVFP--PAETKPEFIIvSPGARVAFTVQChldGRPMGLFPLVSS 372
Cdd:COG2132  187 EVRPGERVRLRLLNASNARIYRLALSdGRPFTVIATDGGLlpAPVEVDELLL-APGERADVLVDF---SADPGEEVTLAN 262
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 373 PHSRSAAYmgrltdvyhgVLGVFDV--RATSSPVPALTLPrsntLRDLrgitDADEPIERFHVTFSSGPPAMrdgamykT 450
Cdd:COG2132  263 PFEGRSGR----------ALLTLRVtgAAASAPLPANLAP----LPDL----EDREAVRTRELVLTGGMAGY-------V 317
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 451 YYMNGMLFDPN-VRYKMKLGQLYEWTLENvLSAEekNHPFHMHTNPFQIVSSshgNGLDHSIGDWRDTITLPFGGNVTIR 529
Cdd:COG2132  318 WTINGKAFDPDrPDLTVKLGERERWTLVN-DTMM--PHPFHLHGHQFQVLSR---NGKPPPEGGWKDTVLVPPGETVRIL 391
                        490       500       510
                 ....*....|....*....|....*....|..
gi 813199250 530 FRPVDFTGLIAAHCHILGHSDAGMLMLIEIQP 561
Cdd:COG2132  392 FRFDNYPGDWMFHCHILEHEDAGMMGQFEVVP 423
CuRO_1_Tth-MCO_like cd13853
The first cupredoxin domain of the bacterial laccases similar to Tth-MCO from Thermus ...
76-212 7.35e-62

The first cupredoxin domain of the bacterial laccases similar to Tth-MCO from Thermus Thermophilus; The subfamily of bacterial laccases includes Tth-MCO and similar proteins. Tth-MCO is a hyperthermophilic multicopper oxidase (MCO) from thermus thermophilus HB27. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259922 [Multi-domain]  Cd Length: 139  Bit Score: 200.17  E-value: 7.35e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  76 VLEITLTVQTARFTNGPVAFNTRSYNGMFPGPTLCAKPGDTLRITLINQL-EMDAPSEGLHMNTLRDPNTTNIHFHGMHV 154
Cdd:cd13853    1 VLEVTLTVEYGRVTLAGLPVTLRTYNGSIPGPTLRVRPGDTLRITLKNDLpPEGAANEAPAPNTPHCPNTTNLHFHGLHV 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 813199250 155 SPSGVADNVMRALKPGESMEVIVKIPDDHPLGVYHYHPHHHGSVFLQMGGGMVGAISI 212
Cdd:cd13853   81 SPTGNSDNVFLTIAPGESFTYEYDIPADHPPGTYWYHPHLHGSTALQVAGGMAGALVV 138
Cu-oxidase_2 pfam07731
Multicopper oxidase; This entry contains many divergent copper oxidase-like domains that are ...
447-561 4.83e-20

Multicopper oxidase; This entry contains many divergent copper oxidase-like domains that are not recognized by the pfam00394 model.


Pssm-ID: 462246 [Multi-domain]  Cd Length: 138  Bit Score: 86.34  E-value: 4.83e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  447 MYKTYYMNGMLFDPNVR-YKMKLGQLYEWTLENVlsaEEKNHPFHMHTNPFQIVSSSHGNGLDHSIGD-------WRDTI 518
Cdd:pfam07731  18 RRNDWAINGLLFPPNTNvITLPYGTVVEWVLQNT---TTGVHPFHLHGHSFQVLGRGGGPWPEEDPKTynlvdpvRRDTV 94
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 813199250  519 TLPFGGNVTIRFRPvDFTGLIAAHCHILGHSDAGMLMLIEIQP 561
Cdd:pfam07731  95 QVPPGGWVAIRFRA-DNPGVWLFHCHILWHLDQGMMGQFVVRP 136
PRK10965 PRK10965
multicopper oxidase; Provisional
53-555 6.19e-17

multicopper oxidase; Provisional


Pssm-ID: 236810 [Multi-domain]  Cd Length: 523  Bit Score: 83.92  E-value: 6.19e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  53 SLLALARDLPSLPSPPVYKSH-NGvlEITLTVQTAR--FTNGPVAfNTRSYNGMFPGPTLCAKPGDTLRITLINQLemda 129
Cdd:PRK10965  23 SRAAFAAERPALPIPPLLTPDaRG--RIQLTIQAGQssFAGKTAT-ATWGYNGNLLGPAVRLQRGKAVTVDITNQL---- 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 130 pseglhmntlrdPNTTNIHFHGMHVspSGVADNVMRAL-KPGESMEVIVKIpdDHPLGVYHYHPHHHGSVFLQMGGGMVG 208
Cdd:PRK10965  96 ------------PEETTLHWHGLEV--PGEVDGGPQGIiAPGGKRTVTFTV--DQPAATCWFHPHQHGKTGRQVAMGLAG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 209 AISIQDSVDD---------VDNV-LVLQaygfkggmlgnligaanvskstlpidaqltnmsHKRVS-DAFPDYQPRFSAP 277
Cdd:PRK10965 160 LVLIEDDESLklglpkqwgVDDIpVILQ---------------------------------DKRFSaDGQIDYQLDVMTA 206
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 278 ATAYpsF---YTVNGQYHP---------RLTLHDG--ERKL-FRLINAGPtqiveLSVPGCDVEVFAKDVfppaetKPEF 342
Cdd:PRK10965 207 AVGW--FgdtLLTNGAIYPqhaaprgwlRLRLLNGcnARSLnLATSDGRP-----LYVIASDGGLLAEPV------KVSE 273
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 343 IIVSPGARVAFTVQCHlDGRPmglFPLVSSPHSRsaayMGRLTDVYHGVLGVFDVRATSSPVPAlTLPrsNTLRDLRGIT 422
Cdd:PRK10965 274 LPILMGERFEVLVDTS-DGKA---FDLVTLPVSQ----MGMALAPFDKPLPVLRIQPLLISASG-TLP--DSLASLPALP 342
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 423 DADEPIER-FHVTFS--------------SGPPA------------MRDGAM----------------YKTYYMNGMLFD 459
Cdd:PRK10965 343 SLEGLTVRrLQLSMDprldmmgmqmlmekYGDQAmagmdmdhmmghMGHGNMdhmnhgaadagpafdfHHANKINGKAFD 422
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 460 PNV-RYKMKLGQLYEWTlenvLSAEEKN--HPFHMHTNPFQIVSSshgNG---LDHSIGdWRDTITLPFG-GNVTIRF-R 531
Cdd:PRK10965 423 MNKpMFAAKKGQYERWV----ISGVGDMmlHPFHIHGTQFRILSE---NGkppAAHRAG-WKDTVRVEGGrSEVLVKFdH 494
                        570       580
                 ....*....|....*....|....
gi 813199250 532 PVDFTGLIAAHCHILGHSDAGMLM 555
Cdd:PRK10965 495 DAPKEHAYMAHCHLLEHEDTGMML 518
laccase TIGR03389
laccase, plant; Members of this protein family include the copper-containing enzyme laccase ...
101-555 1.19e-07

laccase, plant; Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate.


Pssm-ID: 274556 [Multi-domain]  Cd Length: 539  Bit Score: 54.36  E-value: 1.19e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  101 NGMFPGPTLCAKPGDTLRITLINQLEMdapseglhmntlrdpNTTnIHFHGMHVSPSGVADN----VMRALKPGESM--E 174
Cdd:TIGR03389  28 NGKFPGPTLYAREGDTVIVNVTNNVQY---------------NVT-IHWHGVRQLRNGWADGpayiTQCPIQPGQSYvyN 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  175 VIVKIPDdhplGVYHYHPHhhgsvFLQMGGGMVGAISIQDSVDdvdnvlvlQAYGF-KGGMLGNLIGAANVSKSTLPIDA 253
Cdd:TIGR03389  92 FTITGQR----GTLWWHAH-----ISWLRATVYGAIVILPKPG--------VPYPFpKPDREVPIILGEWWNADVEAVIN 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  254 QLTNM-SHKRVSDAfpdyqprfsapataypsfYTVNGQYHP----------RLTLHDGERKLFRLINAGPTQIVELSVPG 322
Cdd:TIGR03389 155 QANQTgGAPNVSDA------------------YTINGHPGPlyncsskdtfKLTVEPGKTYLLRIINAALNDELFFAIAN 216
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  323 CDVEVFAKDVFPPAETKPEFIIVSPGARVafTVQCHLDGRPmGLFPLVSSPHSRSAAYMGRLTDV----YHGVLGVFDVR 398
Cdd:TIGR03389 217 HTLTVVEVDATYTKPFKTKTIVIGPGQTT--NVLLTADQSP-GRYFMAARPYMDAPGAFDNTTTTailqYKGTSNSAKPI 293
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  399 ATSSPVPALTLPRSNTLRDLRGITDADEPI-------ERFHVTFSSGPPAMRDG------------------------AM 447
Cdd:TIGR03389 294 LPTLPAYNDTAAATNFSNKLRSLNSAQYPAnvpvtidRRLFFTIGLGLDPCPNNtcqgpngtrfaasmnnisfvmpttAL 373
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  448 YKTYYMN-------------------------GMLFDPNVR--YKMKLGQLYEWTLE--NVLSAEekNHPFHMHTNPFQI 498
Cdd:TIGR03389 374 LQAHYFGisgvfttdfpanpptkfnytgtnlpNNLFTTNGTkvVRLKFNSTVELVLQdtSILGSE--NHPIHLHGYNFFV 451
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 813199250  499 VSSSHGN------GLDHSIGD--WRDTITLPFGGNVTIRFRpVDFTGLIAAHCHILGHSDAGMLM 555
Cdd:TIGR03389 452 VGTGFGNfdpkkdPAKFNLVDppERNTVGVPTGGWAAIRFV-ADNPGVWFMHCHLEVHTTWGLKM 515
 
Name Accession Description Interval E-value
SufI COG2132
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and ...
63-561 3.58e-71

Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA) [Cell cycle control, cell division, chromosome partitioning, Inorganic ion transport and metabolism, Cell wall/membrane/envelope biogenesis;


Pssm-ID: 441735 [Multi-domain]  Cd Length: 423  Bit Score: 234.44  E-value: 3.58e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  63 SLPSPPVYKShNGVLEITLTVQTA--RFTNGPVAfNTRSYNGMFPGPTLCAKPGDTLRITLINQLemdapseglhmntlr 140
Cdd:COG2132    1 PLPIPPLLES-GGGREYELTAQPAtvELLPGKPT-TVWGYNGQYPGPTIRVREGDRVRVRVTNRL--------------- 63
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 141 dPNTTNIHFHGMHVsPSGVADNVMRALKPGESMEVIVKIPddHPLGVYHYHPHHHGSVFLQMGGGMVGAISIQDSVDDV- 219
Cdd:COG2132   64 -PEPTTVHWHGLRV-PNAMDGVPGDPIAPGETFTYEFPVP--QPAGTYWYHPHTHGSTAEQVYRGLAGALIVEDPEEDLp 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 220 ----DNVLVLQAYGFKGgmlgnligaanvskstlpiDAQLTNMSHKRVSDAFPDYqprfsapataypsfYTVNGQYHPRL 295
Cdd:COG2132  140 rydrDIPLVLQDWRLDD-------------------DGQLLYPMDAAMGGRLGDT--------------LLVNGRPNPTL 186
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 296 TLHDGERKLFRLINAGPTQIVELSVP-GCDVEVFAKDVFP--PAETKPEFIIvSPGARVAFTVQChldGRPMGLFPLVSS 372
Cdd:COG2132  187 EVRPGERVRLRLLNASNARIYRLALSdGRPFTVIATDGGLlpAPVEVDELLL-APGERADVLVDF---SADPGEEVTLAN 262
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 373 PHSRSAAYmgrltdvyhgVLGVFDV--RATSSPVPALTLPrsntLRDLrgitDADEPIERFHVTFSSGPPAMrdgamykT 450
Cdd:COG2132  263 PFEGRSGR----------ALLTLRVtgAAASAPLPANLAP----LPDL----EDREAVRTRELVLTGGMAGY-------V 317
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 451 YYMNGMLFDPN-VRYKMKLGQLYEWTLENvLSAEekNHPFHMHTNPFQIVSSshgNGLDHSIGDWRDTITLPFGGNVTIR 529
Cdd:COG2132  318 WTINGKAFDPDrPDLTVKLGERERWTLVN-DTMM--PHPFHLHGHQFQVLSR---NGKPPPEGGWKDTVLVPPGETVRIL 391
                        490       500       510
                 ....*....|....*....|....*....|..
gi 813199250 530 FRPVDFTGLIAAHCHILGHSDAGMLMLIEIQP 561
Cdd:COG2132  392 FRFDNYPGDWMFHCHILEHEDAGMMGQFEVVP 423
CuRO_1_Tth-MCO_like cd13853
The first cupredoxin domain of the bacterial laccases similar to Tth-MCO from Thermus ...
76-212 7.35e-62

The first cupredoxin domain of the bacterial laccases similar to Tth-MCO from Thermus Thermophilus; The subfamily of bacterial laccases includes Tth-MCO and similar proteins. Tth-MCO is a hyperthermophilic multicopper oxidase (MCO) from thermus thermophilus HB27. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259922 [Multi-domain]  Cd Length: 139  Bit Score: 200.17  E-value: 7.35e-62
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  76 VLEITLTVQTARFTNGPVAFNTRSYNGMFPGPTLCAKPGDTLRITLINQL-EMDAPSEGLHMNTLRDPNTTNIHFHGMHV 154
Cdd:cd13853    1 VLEVTLTVEYGRVTLAGLPVTLRTYNGSIPGPTLRVRPGDTLRITLKNDLpPEGAANEAPAPNTPHCPNTTNLHFHGLHV 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 813199250 155 SPSGVADNVMRALKPGESMEVIVKIPDDHPLGVYHYHPHHHGSVFLQMGGGMVGAISI 212
Cdd:cd13853   81 SPTGNSDNVFLTIAPGESFTYEYDIPADHPPGTYWYHPHLHGSTALQVAGGMAGALVV 138
CuRO_3_Tth-MCO_like cd13900
The third cupredoxin domain of the bacterial laccases similar to Tth-MCO from Thermus ...
433-559 3.13e-31

The third cupredoxin domain of the bacterial laccases similar to Tth-MCO from Thermus Thermophilus; The subfamily of bacterial laccases includes Tth-MCO and similar proteins. Tth-MCO is a hyperthermophilic multicopper oxidase (MCO) from thermus thermophilus HB27. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259967 [Multi-domain]  Cd Length: 123  Bit Score: 117.35  E-value: 3.13e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 433 VTFSSGPPAMRDGAmyktYYMNGMLFDPN-VRYKMKLGQLYEWTLENvLSAEEknHPFHMHTNPFQIVSsshGNGLDHSI 511
Cdd:cd13900    6 LVFSEGMSPGGGGA----FTINGKPFDPDrPDRTVRLGTVEEWTLIN-TSGED--HPFHIHVNPFQVVS---INGKPGLP 75
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 813199250 512 GDWRDTITLPFGGNVTIRFRPVDFTGLIAAHCHILGHSDAGMLMLIEI 559
Cdd:cd13900   76 PVWRDTVNVPAGGSVTIRTRFRDFTGEFVLHCHILDHEDQGMMQVVEI 123
CuRO_3_LCC_like cd04207
Cupredoxin domain 3 of laccase-like multicopper oxidases; including laccase, CueO, spore coat ...
447-558 1.94e-25

Cupredoxin domain 3 of laccase-like multicopper oxidases; including laccase, CueO, spore coat protein A, ascorbate oxidase and similar proteins; Laccase-like multicopper oxidases (MCOs) in this family contain three cupredoxin domains. They are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites; Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3. Also included in this family are cupredoxin domains 2, 4, and 6 of the 6-domain MCO ceruloplasmin and similar proteins.


Pssm-ID: 259870 [Multi-domain]  Cd Length: 132  Bit Score: 101.38  E-value: 1.94e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 447 MYKTYYMNGMLFDPNVR----YKMKLGQLYEWTLENvLSAEEKNHPFHMHTNPFQIVSSSHGNG---LDHSIGDWRDTIT 519
Cdd:cd04207   16 GTTRWVINGMPFKEGDAntdiFSVEAGDVVEIVLIN-AGNHDMQHPFHLHGHSFWVLGSGGGPFdapLNLTNPPWRDTVL 94
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 813199250 520 LPFGGNVTIRFRpVDFTGLIAAHCHILGHSDAGMLMLIE 558
Cdd:cd04207   95 VPPGGWVVIRFK-ADNPGVWMLHCHILEHEDAGMMTVFE 132
CuRO_3_McoC_like cd13902
The third cupredoxin domain of a multicopper oxidase McoC and similar proteins; This family ...
433-559 3.54e-21

The third cupredoxin domain of a multicopper oxidase McoC and similar proteins; This family includes bacteria multicopper oxidases (MCOs) represented by McoC from pathogenic bacterium Campylobacter jejuni. McoC is a periplasmic multicopper oxidase, which has been characterized to be associated with copper homeostasis. McoC may also function to protect against oxidative stress as it may convert metallic ions into their less toxic form. MCOs are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. They are capable of oxidizing a vast range of substrates, varying from aromatic compunds to inorganic compounds such as metals. Most MCOs have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259969 [Multi-domain]  Cd Length: 125  Bit Score: 89.38  E-value: 3.54e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 433 VTFSSGPPAMRDGAMY----KTYYMNGMLFDpnvrykMKLGQLYEWTLENvlsAEEKNHPFHMHTNPFQIVSSsHGNGLD 508
Cdd:cd13902    6 VVFSEGMSMGAGGMMFlingKTFDMNRIDFV------AKVGEVEVWEVTN---TSHMDHPFHLHGTQFQVLEI-DGNPQK 75
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 813199250 509 HSIGDWRDTITLPFGGNVTIRFRPvDFTGLIAAHCHILGHSDAGMLMLIEI 559
Cdd:cd13902   76 PEYRAWKDTVNLPPGEAVRIATRQ-DDPGMWMYHCHILEHEDAGMMGMLHV 125
Cu-oxidase_2 pfam07731
Multicopper oxidase; This entry contains many divergent copper oxidase-like domains that are ...
447-561 4.83e-20

Multicopper oxidase; This entry contains many divergent copper oxidase-like domains that are not recognized by the pfam00394 model.


Pssm-ID: 462246 [Multi-domain]  Cd Length: 138  Bit Score: 86.34  E-value: 4.83e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  447 MYKTYYMNGMLFDPNVR-YKMKLGQLYEWTLENVlsaEEKNHPFHMHTNPFQIVSSSHGNGLDHSIGD-------WRDTI 518
Cdd:pfam07731  18 RRNDWAINGLLFPPNTNvITLPYGTVVEWVLQNT---TTGVHPFHLHGHSFQVLGRGGGPWPEEDPKTynlvdpvRRDTV 94
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 813199250  519 TLPFGGNVTIRFRPvDFTGLIAAHCHILGHSDAGMLMLIEIQP 561
Cdd:pfam07731  95 QVPPGGWVAIRFRA-DNPGVWLFHCHILWHLDQGMMGQFVVRP 136
CuRO_1_LCC_like cd04206
Cupredoxin domain 1 of laccase-like multicopper oxidases; including laccase, CueO, spore coat ...
78-210 2.72e-18

Cupredoxin domain 1 of laccase-like multicopper oxidases; including laccase, CueO, spore coat protein A, ascorbate oxidase and similar proteins; Laccase-like multicopper oxidases (MCOs) in this family contain three cupredoxin domains. They are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites; Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3. Also included in this family are cupredoxin domains 1, 3, and 5 of the 6-domain MCO ceruloplasmin and similar proteins.


Pssm-ID: 259869 [Multi-domain]  Cd Length: 120  Bit Score: 80.79  E-value: 2.72e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  78 EITLTVQTARFTNGPVAFNTRSYNGMFPGPTLCAKPGDTLRITLINQLemdaPSEGlhmntlrdpntTNIHFHGMHVSPS 157
Cdd:cd04206    2 EYELTITETTVNPDGVLRQVITVNGQFPGPTIRVKEGDTVEVTVTNNL----PNEP-----------TSIHWHGLRQPGT 66
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 813199250 158 GVADNVMR----ALKPGESMEVIVKIPDDHplGVYHYHPHHHGsvflQMGGGMVGAI 210
Cdd:cd04206   67 NDGDGVAGltqcPIPPGESFTYRFTVDDQA--GTFWYHSHVGG----QRADGLYGPL 117
Cu-oxidase_3 pfam07732
Multicopper oxidase; This entry contains many divergent copper oxidase-like domains that are ...
100-214 7.12e-18

Multicopper oxidase; This entry contains many divergent copper oxidase-like domains that are not recognized by the pfam00394 model.


Pssm-ID: 462247 [Multi-domain]  Cd Length: 119  Bit Score: 79.60  E-value: 7.12e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  100 YNGMFPGPTLCAKPGDTLRITLINQLemdapseglhmntlrdPNTTNIHFHGMHVSPSGVADNV----MRALKPGESMEV 175
Cdd:pfam07732  20 VNGQFPGPTIRVREGDTVVVNVTNNL----------------DEPTSIHWHGLQQRGTPWMDGVpgvtQCPIPPGQSFTY 83
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 813199250  176 IVKIPDdhPLGVYHYHPHHHGsvflQMGGGMVGAISIQD 214
Cdd:pfam07732  84 RFQVKQ--QAGTYWYHSHTSG----QQAAGLAGAIIIED 116
CuRO_3_CueO_FtsP cd13890
The third Cupredoxin domain of the multicopper oxidase CueO, the cell division protein FtsP, ...
454-559 4.23e-17

The third Cupredoxin domain of the multicopper oxidase CueO, the cell division protein FtsP, and similar proteins; CueO is a multicopper oxidase (MCO) that is part of the copper-regulatory cue operon, which employs a cytosolic metalloregulatory protein CueR that induces expression of CopA and CueO under copper stress conditions. CueO is a periplasmic multicopper oxidase that is stimulated by exogenous copper(II). FtsP (also named SufI) is a component of the cell division apparatus. It is involved in protecting or stabilizing the assembly of divisomes under stress conditions. FtsP belongs to the multicopper oxidase superfamily but lacks metal cofactors. The protein is localized at septal rings and may serve as a scaffolding function. Members of this subfamily contain three cupredoxin domains and this model represents the first domain. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3. FtsP does not contain any copper binding sites.


Pssm-ID: 259957 [Multi-domain]  Cd Length: 124  Bit Score: 77.67  E-value: 4.23e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 454 NGMLFDPN-VRYKMKLGQLYEWTLENVLSAEeknHPFHMHTNPFQIVSSSHGNGLDHSIGdWRDTITLPFGGNVTI--RF 530
Cdd:cd13890   19 NGKRFDMNrIDFTVKLGTTEIWEVTNTDGMP---HPFHIHGVQFRILSRNGQPPPPNEAG-WKDTVWVPPGETVRIlvKF 94
                         90       100       110
                 ....*....|....*....|....*....|
gi 813199250 531 -RPVDFTGLIAAHCHILGHSDAGMLMLIEI 559
Cdd:cd13890   95 dHYADPTGPFMYHCHILEHEDNGMMGQFVV 124
PRK10965 PRK10965
multicopper oxidase; Provisional
53-555 6.19e-17

multicopper oxidase; Provisional


Pssm-ID: 236810 [Multi-domain]  Cd Length: 523  Bit Score: 83.92  E-value: 6.19e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  53 SLLALARDLPSLPSPPVYKSH-NGvlEITLTVQTAR--FTNGPVAfNTRSYNGMFPGPTLCAKPGDTLRITLINQLemda 129
Cdd:PRK10965  23 SRAAFAAERPALPIPPLLTPDaRG--RIQLTIQAGQssFAGKTAT-ATWGYNGNLLGPAVRLQRGKAVTVDITNQL---- 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 130 pseglhmntlrdPNTTNIHFHGMHVspSGVADNVMRAL-KPGESMEVIVKIpdDHPLGVYHYHPHHHGSVFLQMGGGMVG 208
Cdd:PRK10965  96 ------------PEETTLHWHGLEV--PGEVDGGPQGIiAPGGKRTVTFTV--DQPAATCWFHPHQHGKTGRQVAMGLAG 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 209 AISIQDSVDD---------VDNV-LVLQaygfkggmlgnligaanvskstlpidaqltnmsHKRVS-DAFPDYQPRFSAP 277
Cdd:PRK10965 160 LVLIEDDESLklglpkqwgVDDIpVILQ---------------------------------DKRFSaDGQIDYQLDVMTA 206
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 278 ATAYpsF---YTVNGQYHP---------RLTLHDG--ERKL-FRLINAGPtqiveLSVPGCDVEVFAKDVfppaetKPEF 342
Cdd:PRK10965 207 AVGW--FgdtLLTNGAIYPqhaaprgwlRLRLLNGcnARSLnLATSDGRP-----LYVIASDGGLLAEPV------KVSE 273
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 343 IIVSPGARVAFTVQCHlDGRPmglFPLVSSPHSRsaayMGRLTDVYHGVLGVFDVRATSSPVPAlTLPrsNTLRDLRGIT 422
Cdd:PRK10965 274 LPILMGERFEVLVDTS-DGKA---FDLVTLPVSQ----MGMALAPFDKPLPVLRIQPLLISASG-TLP--DSLASLPALP 342
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 423 DADEPIER-FHVTFS--------------SGPPA------------MRDGAM----------------YKTYYMNGMLFD 459
Cdd:PRK10965 343 SLEGLTVRrLQLSMDprldmmgmqmlmekYGDQAmagmdmdhmmghMGHGNMdhmnhgaadagpafdfHHANKINGKAFD 422
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 460 PNV-RYKMKLGQLYEWTlenvLSAEEKN--HPFHMHTNPFQIVSSshgNG---LDHSIGdWRDTITLPFG-GNVTIRF-R 531
Cdd:PRK10965 423 MNKpMFAAKKGQYERWV----ISGVGDMmlHPFHIHGTQFRILSE---NGkppAAHRAG-WKDTVRVEGGrSEVLVKFdH 494
                        570       580
                 ....*....|....*....|....
gi 813199250 532 PVDFTGLIAAHCHILGHSDAGMLM 555
Cdd:PRK10965 495 DAPKEHAYMAHCHLLEHEDTGMML 518
CuRO_1_CueO_FtsP cd04232
The first Cupredoxin domain of the multicopper oxidase CueO, the cell division protein FtsP, ...
78-214 6.97e-17

The first Cupredoxin domain of the multicopper oxidase CueO, the cell division protein FtsP, and similar proteins; CueO is a multicopper oxidase (MCO) that is part of the copper-regulatory cue operon, which employs a cytosolic metalloregulatory protein CueR that induces expression of CopA and CueO under copper stress conditions. CueO is a periplasmic multicopper oxidase that is stimulated by exogenous copper(II). FtsP (also named SufI) is a component of the cell division apparatus. It is involved in protecting or stabilizing the assembly of divisomes under stress conditions. FtsP belongs to the multicopper oxidase superfamily but lacks metal cofactors. The protein is localized at septal rings and may serve as a scaffolding function. Members of this subfamily contain three cupredoxin domains and this model represents the first domain. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3. FtsP does not contain any copper binding sites.


Pssm-ID: 259894 [Multi-domain]  Cd Length: 120  Bit Score: 76.84  E-value: 6.97e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  78 EITLTVQTAR---FTNGPVAfnTRSYNGMFPGPTLCAKPGDTLRITLINQLemdapseglhmntlrdPNTTNIHFHGMHV 154
Cdd:cd04232    2 PFTLTAQKGEtefLPGKKTA--TWGYNGSYLGPTIRVKKGDTVRINVTNNL----------------DEETTVHWHGLHV 63
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 155 sPSGVADNVMRALKPGESMEVIVKIpdDHPLGVYHYHPHHHGSVFLQMGGGMVGAISIQD 214
Cdd:cd04232   64 -PGEMDGGPHQPIAPGQTWSPTFTI--DQPAATLWYHPHTHGKTAEQVYRGLAGLFIIED 120
CuRO_3_MCO_like_5 cd13911
The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) ...
453-558 2.23e-15

The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This subfamily of MCOs is composed of three cupredoxin domains. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259978 [Multi-domain]  Cd Length: 119  Bit Score: 72.58  E-value: 2.23e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 453 MNGMLFDPN-VRYKMKLGQLYEWTLENVLsaeekNHPFHMHTNPFQIVSSSHGNGLDHSIGdWRDTITLPFGGNVTIRFR 531
Cdd:cd13911   19 VNGKVFDPDhIAARPRLGTTEIWVFSSDG-----RHPVHLHGAHFQVVSRTGGRPGEWDAG-WKDTVLLRPRESVTVIIR 92
                         90       100
                 ....*....|....*....|....*..
gi 813199250 532 PVDFTGLIAAHCHILGHSDAGMLMLIE 558
Cdd:cd13911   93 FDGYRGRYVFHCHNLEHEDMGMMANFQ 119
CuRO_1_2dMco_1 cd13860
The first cupredoxin domain of bacteria two domain multicopper oxidase; This subfamily ...
100-212 6.46e-14

The first cupredoxin domain of bacteria two domain multicopper oxidase; This subfamily includes bacterial two domain multicopper oxidases (2dMCOs) with similarity to McoN from Nitrosomonas europaea. 2dMCO is a trimeric type C blue copper oxidase. Each subunit houses a type 1 copper site in domain 1 and a type 2/type 3 trinuclear copper cluster at the subunit-subunit interface. The 2dMCO is proposed to be a key intermediate in the evolution of three domain MCOs. Multicopper oxidases couple oxidation of substrates with reduction of dioxygen to water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals.


Pssm-ID: 259929 [Multi-domain]  Cd Length: 119  Bit Score: 68.38  E-value: 6.46e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 100 YNGMFPGPTLCAKPGDTLRITLINQLemdapseglhmntlrdPNTTNIHFHGMHVSPS--GVADNVMRALKPGESM--EV 175
Cdd:cd13860   25 YNGSVPGPTIEVTEGDRVRILVTNEL----------------PEPTTVHWHGLPVPNGmdGVPGITQPPIQPGETFtyEF 88
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 813199250 176 IVKIPddhplGVYHYHPHHHGSVflQMGGGMVGAISI 212
Cdd:cd13860   89 TAKQA-----GTYMYHSHVDEAK--QEDMGLYGAFIV 118
CuRO_3_MCO_like_4 cd13910
The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) ...
484-557 1.60e-13

The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This subfamily of MCOs is composed of three cupredoxin domains. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259977 [Multi-domain]  Cd Length: 166  Bit Score: 68.48  E-value: 1.60e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 484 EKNHPFHMHTNPFQIVSSSHGN----GLDHSIGDW--------RDTITLPFGGNVTIRFrPVDFTGLIAAHCHILGHSDA 551
Cdd:cd13910   80 DGDHPFHLHGHKFWVLGSGDGRygggGYTAPDGTSlnttnplrRDTVSVPGFGWAVLRF-VADNPGLWAFHCHILWHMAA 158

                 ....*.
gi 813199250 552 GMLMLI 557
Cdd:cd13910  159 GMLMQF 164
CuRO_1_CumA_like cd13861
The first cupredoxin domain of CumA like multicopper oxidase; This multicopper oxidase (MCO) ...
100-210 3.68e-13

The first cupredoxin domain of CumA like multicopper oxidase; This multicopper oxidase (MCO) subfamily includes CumA from Pseudomonas putida, which is involved in the oxidation of Mn(II). However, the cumA gene has been identified in a variety of bacterial species, including both Mn(II)-oxidizing and non-Mn(II)-oxidizing strains. Thus, the proteins in this family may catalyze the oxidation of other substrates. MCO catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water and has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259930 [Multi-domain]  Cd Length: 119  Bit Score: 66.10  E-value: 3.68e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 100 YNGMFPGPTLCAKPGDTLRITLINQLemdapseglhmntlrdPNTTNIHFHGMHVsPS---GVADNVMRALKPGESMEVI 176
Cdd:cd13861   25 YNGQVPGPELRVRQGDTLRVRLTNRL----------------PEPTTIHWHGLRL-PNamdGVPGLTQPPVPPGESFTYE 87
                         90       100       110
                 ....*....|....*....|....*....|....
gi 813199250 177 VKIPDDhplGVYHYHPHHHGSVflQMGGGMVGAI 210
Cdd:cd13861   88 FTPPDA---GTYWYHPHVGSQE--QLDRGLYGPL 116
CuRO_1_Abr2_like cd13850
The first cupredoxin domain of a group of fungal Laccases similar to Abr2 from Aspergillus ...
79-213 2.47e-12

The first cupredoxin domain of a group of fungal Laccases similar to Abr2 from Aspergillus fumigatus; Abr2 is involved in conidial pigment biosynthesis in Aspergillus fumigatus. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Like other related multicopper oxidases (MCOs), laccase is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259919 [Multi-domain]  Cd Length: 117  Bit Score: 63.86  E-value: 2.47e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  79 ITLTVQTARFTngPVAFNTRSY--NGMFPGPTLCAKPGDTLRITLINQLemdapseglhmntlrdPNTTNIHFHGMHVSP 156
Cdd:cd13850    1 FTLTVTEGSPD--GDGGEREVIliNGQFPGPPIILDEGDEVEILVTNNL----------------PVNTTIHFHGILQRG 62
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 813199250 157 SGVADNV----MRALKPGESMEVIVKIPDDHplGVYHYHPHHHGsvflQMGGGMVGAISIQ 213
Cdd:cd13850   63 TPWSDGVpgvtQWPIQPGGSFTYRWKAEDQY--GLYWYHSHYRG----YYMDGLYGPIYIR 117
CuRO_3_Fet3p cd13899
The third Cupredoxin domain of multicopper oxidase Fet3p; Fet3p catalyzes the ferroxidase ...
486-558 4.13e-12

The third Cupredoxin domain of multicopper oxidase Fet3p; Fet3p catalyzes the ferroxidase reaction, which couples the oxidation of Fe(II) to Fe(III) with the four-electron reduction of molecular oxygen to water. Fet3p is a type I membrane protein with the amino-terminal oxidase domain in the extracellular space and the carboxyl terminus in the cytoplasm. The periplasmic produced Fe(III) is transferred to the permease Ftr1p for import into the cytosol. The four copper ions are inserted post-translationally and are essential for catalytic activity, thus linking copper and iron homeostasis. Like other related multicopper oxidases (MCOs), Fet3p is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259966 [Multi-domain]  Cd Length: 160  Bit Score: 64.20  E-value: 4.13e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 486 NHPFHMHTNPFQIV--SSSHGNGLD-------HSIGDWRDTITLPFGGNVTIRFRpVDFTGLIAAHCHILGHSDAGM-LM 555
Cdd:cd13899   77 KHPFHLHGHKFQVVqrSPDVASDDPnppinefPENPMRRDTVMVPPGGSVVIRFR-ADNPGVWFFHCHIEWHLEAGLaAT 155

                 ...
gi 813199250 556 LIE 558
Cdd:cd13899  156 FIE 158
CuRO_1_McoC_like cd13855
The first cupredoxin domain of a multicopper oxidase McoC and similar proteins; This family ...
99-213 4.96e-12

The first cupredoxin domain of a multicopper oxidase McoC and similar proteins; This family includes bacteria multicopper oxidases (MCOs) represented by McoC from pathogenic bacterium Campylobacter jejuni. McoC is a periplasmic multicopper oxidase, which has been characterized to be associated with copper homeostasis. McoC may also function to protect against oxidative stress as it may convert metallic ions into their less toxic form. MCOs are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. They are capable of oxidizing a vast range of substrates, varying from aromatic compunds to inorganic compounds such as metals. Most MCOs have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259924 [Multi-domain]  Cd Length: 121  Bit Score: 62.88  E-value: 4.96e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  99 SYNGMFPGPTLCAKPGDTLRITLINQLemdapseglhmntlrdPNTTNIHFHGMHVsPSGVADNVMRALKPGESMEVIVK 178
Cdd:cd13855   25 AYNGSVPGPLIEVFEGDTVEITFRNRL----------------PEPTTVHWHGLPV-PPDQDGNPHDPVAPGNDRVYRFT 87
                         90       100       110
                 ....*....|....*....|....*....|....*
gi 813199250 179 IPDDHPlGVYHYHPHHHGSVFLQMGGGMVGAISIQ 213
Cdd:cd13855   88 LPQDSA-GTYWYHPHPHGHTAEQVYRGLAGAFVVK 121
CuRO_1_CuNIR cd11020
Cupredoxin domain 1 of Copper-containing nitrite reductase; Copper-containing nitrite ...
76-210 5.56e-12

Cupredoxin domain 1 of Copper-containing nitrite reductase; Copper-containing nitrite reductase (CuNIR), which catalyzes the reduction of NO2- to NO, is the key enzyme in the denitrification process in denitrifying bacteria. CuNIR contains at least one type 1 copper center and a type 2 copper center, which serves as the active site of the enzyme. A histidine, bound to the Type 2 Cu center, is responsible for binding and reducing nitrite. A Cys-His bridge plays an important role in facilitating rapid electron transfer from the type 1 center to the type 2 center. A reduced type I blue copper protein (pseudoazurin) was found to be a specific electron transfer donor for the copper-containing NIR in bacteria Alcaligenes faecalis.


Pssm-ID: 259906 [Multi-domain]  Cd Length: 119  Bit Score: 62.61  E-value: 5.56e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  76 VLEITLTVQ--TARFTNGpVAFNTRSYNGMFPGPTLCAKPGDTLRITLINqlemdapseglhmntlRDPNTT--NIHFHG 151
Cdd:cd11020    1 VVEVTLTTVekVVEIAPG-VTYTAWTFNGQVPGPVIRVREGDTVELTLTN----------------PGTNTMphSIDFHA 63
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 813199250 152 MHVSPSGvadnVMRALKPGESMEVIVKIpdDHPlGVYHYH------PHHhgsvflqMGGGMVGAI 210
Cdd:cd11020   64 ATGPGGG----EFTTIAPGETKTFSFKA--LYP-GVFMYHcatapvLMH-------IANGMYGAI 114
CuRO_3_tcLLC2_insect_like cd13905
The third cupredoxin domain of the insect laccases similar to laccase 2 in Tribolium castaneum; ...
465-557 4.30e-11

The third cupredoxin domain of the insect laccases similar to laccase 2 in Tribolium castaneum; This multicopper oxidase (MCO) family includes the majority of insect laccases. One member of the family is laccase 2 from Tribolium castaneum. Laccase 2 is required for beetle cuticle tanning. Laccase (polyphenol oxidase EC 1.10.3.2) is a blue multi-copper enzyme that catalyzes the oxidation of a variety of organic substrates coupled to the reduction of molecular oxygen to water. It displays broad substrate specificity, catalyzing the oxidation of a wide variety of aromatic - notably phenolic and inorganic substances. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi, plants and insects. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259972 [Multi-domain]  Cd Length: 174  Bit Score: 61.93  E-value: 4.30e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 465 KMKLGQLYEWTLENVLSAEEKNHPFHMHTNPFQIVSSSHG----------NGLDHSIGDWR--------------DTITL 520
Cdd:cd13905   48 KLPLNSVVEIVLINEGPGPGLSHPFHLHGHSFYVLGMGFPgynsttgeilSQNWNNKLLDRgglpgrnlvnpplkDTVVV 127
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 813199250 521 PFGGNVTIRFRPvDFTGLIAAHCHILGHSDAGMLMLI 557
Cdd:cd13905  128 PNGGYVVIRFRA-DNPGYWLLHCHIEFHLLEGMALVL 163
CuRO_1_2DMCO_NIR_like cd11024
The cupredoxin domain 1 of a two-domain laccase related to nitrite reductase; The two-domain ...
76-193 7.61e-11

The cupredoxin domain 1 of a two-domain laccase related to nitrite reductase; The two-domain laccase (small laccase) in this family differs significantly from all laccases. It resembles the two domain nitrite reductase in both sequence and structure. It consists of two cupredoxin domains and forms trimers and hence resembles the quaternary structure of nitrite reductases more than that of large laccases. There are three trinuclear copper clusters in the enzyme localized between domains 1 and 2 of each pair of neighbor chains. Three copper ions of type 1 lie close to one another near the surface of the central part of the trimer, and, effectively, a trimeric substrate binding site is formed in their vicinity. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety of organic substrates coupled to the reduction of molecular oxygen to water. It displays broad substrate specificity, catalyzing the oxidation of a wide variety of aromatic, notably phenolic, and inorganic substances. Laccase has been implicated in a wide spectrum of biological activities.


Pssm-ID: 259910 [Multi-domain]  Cd Length: 119  Bit Score: 59.59  E-value: 7.61e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  76 VLEITLTVQTARFTNGP-VAFNTRSYNGMFPGPTLCAKPGDTLRITLINQLEMdapseglhmntlrdPNTtnIHFHGMHv 154
Cdd:cd11024    1 VREFTLVAEDAEIEIAPgVVFKAWTYNGTVPGPTLRATEGDLVRIHFINTGDH--------------PHT--IHFHGIH- 63
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 813199250 155 sPSGVADNVMRALKPGESmeVIVKIPDDhPLGVYHYHPH 193
Cdd:cd11024   64 -DAAMDGTGLGPIMPGES--FTYEFVAE-PAGTHLYHCH 98
CuRO_2_McoC_like cd13881
The second cupredoxin domain of a multicopper oxidase McoC and similar proteins; This family ...
284-382 3.78e-10

The second cupredoxin domain of a multicopper oxidase McoC and similar proteins; This family includes bacterial multicopper oxidases (MCOs) represented by McoC from the pathogenic bacterium Campylobacter jejuni. McoC is a periplasmic MCO, which has been characterized to be associated with copper homeostasis. McoC may also function to protect against oxidative stress as it may convert metallic ions into their less toxic form. MCOs are multi-domain enzymes that are able to couple oxidation of substrates with the reduction of dioxygen to water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. They are composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259948 [Multi-domain]  Cd Length: 142  Bit Score: 58.39  E-value: 3.78e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 284 FYTVNGQYHPRLTLHDGERKLFRLINAGPTQIVELSVPGCDVEVFAKDVFPPAETKP-EFIIVSPGARVAFTVQChldGR 362
Cdd:cd13881   33 LVLVNGQLNPTITVRPGEVQRWRIVNAASARYFRLALDGHKFRLIGTDGGLLEAPREvDELLLAPGERAEVLVTA---GE 109
                         90       100
                 ....*....|....*....|
gi 813199250 363 PMGLFPLVSSPHSRsaAYMG 382
Cdd:cd13881  110 PGGRLVLLALPYDR--GHMG 127
CuRO_3_BOD cd13889
The third cupredoxin domain of Bilirubin oxidase (BOD); Bilirubin oxidase (BOD) catalyzes the ...
458-559 7.91e-10

The third cupredoxin domain of Bilirubin oxidase (BOD); Bilirubin oxidase (BOD) catalyzes the oxidation of bilirubin to biliverdin and the four-electron reduction of molecular oxygen to water. It is used in diagnosing jaundice through the determination of bilirubin in serum. BOD is a member of the multicopper oxidase (MCO) family that also includes laccase, ascorbate oxidase and ceruloplasmin. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259956 [Multi-domain]  Cd Length: 124  Bit Score: 56.94  E-value: 7.91e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 458 FDPN-VRYKMKLGQLYEWTLENVLSAEekNHPFHMHTNPFQIVSSSHGNG--LDHSIGdWRDTITLPFGGNVTIRFRPVD 534
Cdd:cd13889   23 ADPNrIDAAPQLGTVEIWTLINGGGGW--SHPIHIHLEDFQILSRNGGSRavPPYERG-RKDVVYLGPGEEVRVLMRFRP 99
                         90       100
                 ....*....|....*....|....*
gi 813199250 535 FTGLIAAHCHILGHSDAGMLMLIEI 559
Cdd:cd13889  100 FRGKYMMHCHNLVHEDHDMMLRFEV 124
CuRO_3_MCO_like_1 cd13907
The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) ...
487-554 8.42e-10

The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This subfamily of MCOs is composed of three cupredoxin domains. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259974 [Multi-domain]  Cd Length: 154  Bit Score: 57.49  E-value: 8.42e-10
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 813199250 487 HPFHMHTNPFQIVSSSHGNGLD---HSIGD------WRDTITLPFGGNVTIRFRPVDFTGLIAAHCHILGHSDAGML 554
Cdd:cd13907   72 HPIHLHGVQFQVLERSVGPKDRaywATVKDgfidegWKDTVLVMPGERVRIIKPFDDYKGLFLYHCHNLEHEDMGMM 148
CuRO_1_McoP_like cd13852
The first cupredoxin domain of multicopper oxidase McoP and similar proteins; This family ...
106-215 3.46e-09

The first cupredoxin domain of multicopper oxidase McoP and similar proteins; This family includes archaeal and bacterial multicopper oxidases (MCOs), represented by the extremely thermostable McoP from the hyperthermophilic archaeon Pyrobaculum aerophilum. McoP is an efficient metallo-oxidase that catalyzes the oxidation of cuprous and ferrous ions. It is noteworthy that McoP has three-fold higher catalytic efficiency when using nitrous oxide as the electron acceptor than when using dioxygen, the typical oxidizing substrate of MCOs. McoP may function as a novel archaeal nitrous oxide reductase that is probably involved in the denitrification pathway in archaea. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259921 [Multi-domain]  Cd Length: 114  Bit Score: 54.60  E-value: 3.46e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 106 GPTLCAKPGDTLRITLINQLemdapseglhmntlrdPNTTNIHFHGMHVsPSGVADNVMRALKPGES----MEVIvkipd 181
Cdd:cd13852   24 GPILRLRKGQKVRITFKNNL----------------PEPTIIHWHGLHV-PAAMDGHPRYAIDPGETyvyeFEVL----- 81
                         90       100       110
                 ....*....|....*....|....*....|....
gi 813199250 182 dHPLGVYHYHPHHHGSVFLQMGGGMVGAISIQDS 215
Cdd:cd13852   82 -NRAGTYWYHPHPHGLTAKQVYRGLAGLFLVTDE 114
CuRO_3_CumA_like cd13906
The third cupredoxin domain of CumA like multicopper oxidase; This multicopper oxidase (MCO) ...
429-560 3.67e-09

The third cupredoxin domain of CumA like multicopper oxidase; This multicopper oxidase (MCO) subfamily includes CumA from Pseudomonas putida, which is involved in the oxidation of Mn(II). However, the cumA gene has been identified in a variety of bacterial species, including both Mn(II)-oxidizing and non-Mn(II)-oxidizing strains. Thus, the proteins in this family may catalyze the oxidation of other substrates. MCO catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water and has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259973 [Multi-domain]  Cd Length: 138  Bit Score: 55.47  E-value: 3.67e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 429 ERFHVTFSSG-----PPAMRDGAMYKTYYMNG-------MLFDPNVRYKMKLGQLYEWTLENVlsaEEKNHPFHMHTNPF 496
Cdd:cd13906    2 EFHLFAFQGGmmgapPDGGSGVAGGTFWAINGtswtggdHSHLPPPLATLKRGRSYVLRLVNE---TAFLHPMHLHGHFF 78
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 813199250 497 QIVSSShGNGLDHsiGDWRDTITLPFGGNVTIRFRPVDfTGLIAAHCHILGHSDAGMLMLIEIQ 560
Cdd:cd13906   79 RVLSRN-GRPVPE--PFWRDTVLLGPKETVDIAFVADN-PGDWMFHCHILEHQETGMMGVIRVA 138
CuRO_3_PHS cd13892
The third Cupredoxin domain of phenoxazinone synthase (PHS); Phenoxazinone synthase (PHS, ...
449-561 4.14e-09

The third Cupredoxin domain of phenoxazinone synthase (PHS); Phenoxazinone synthase (PHS, 2-aminophenol:oxygen oxidoreductase) catalyzes the oxidative coupling of substituted o-aminophenols to produce phenoxazinones. PHS has been shown to participate in diverse biological functions such as spore pigmentation and biosynthesis of the antibiotic grixazone. PHS is a member of the laccase-like multicopper oxidase (MCO) family, which are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259959 [Multi-domain]  Cd Length: 184  Bit Score: 56.38  E-value: 4.14e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 449 KTYYMNGMLFDPNVRYKMKLGQLYEWTLENVLSAEEknHPFHMHTNPFQIVSSS---------------------HGNGL 507
Cdd:cd13892   51 RTLRRIAKLFDDDVNFTAAAGSWERWTFVNLGEGHP--HPMHIHLAEFQVLERQpydvtgfdttvggtdrpitpgEAAPL 128
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 813199250 508 DHSIGDWRDTITLPFGGNVTIRFRPVDFTGLIAAHCHILGHSDAGMLMLIEIQP 561
Cdd:cd13892  129 EPVELGWKDTVVVGPGELVTVLVQFDGATGRFMYHCHILEHEDHDMMRPFVVQP 182
CuRO_2_CumA_like cd13885
The second cupredoxin domain of CumA like multicopper oxidase; This multicopper oxidase (MCO) ...
282-351 4.73e-09

The second cupredoxin domain of CumA like multicopper oxidase; This multicopper oxidase (MCO) subfamily includes CumA from Pseudomonas putida. CumA is involved in the oxidation of Mn(II) in Pseudomonas putida; however, the cumA gene has been identified in a variety of bacterial species, including both Mn(II)-oxidizing and non-Mn(II)-oxidizing strains. Thus, the proteins in this family may catalyze the oxidation of other substrates. MCOs catalyze the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water and has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. The MCOs in this subfamily are composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.


Pssm-ID: 259952 [Multi-domain]  Cd Length: 132  Bit Score: 54.64  E-value: 4.73e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 813199250 282 PSFYTVNGQYHPRLTLHDGERKLFRLINAGPTQIVELSVPGCDVEVFAKDVFP--PAETKPEFIIVSPGARV 351
Cdd:cd13885   35 GNLYTINGRVQPDFTVRAGERVRLRLINAANARVFALKFPGHEARVIALDGQPaePFVARNGAVVLAPGMRI 106
CuRO_1_MaLCC_like cd13854
The first cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus ...
101-212 6.87e-09

The first cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus albomyces; The subfamily of fungal laccases includes Ma-LCC and similar proteins. Ma-LCC is a multicopper oxidase (MCO) from Melanocarpus albomyces. Its crystal structure contains all four coppers at the mono- and trinuclear copper centers. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259923 [Multi-domain]  Cd Length: 122  Bit Score: 54.17  E-value: 6.87e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 101 NGMFPGPTLCAKPGDTLRITLINQLEmdapseglhmntlrdPNTTNIHFHGMHVSPSGVADNVMR----ALKPGESMEVI 176
Cdd:cd13854   28 NGQYPGPLIEANWGDTIEVTVINKLQ---------------DNGTSIHWHGIRQLNTNWQDGVPGvtecPIAPGDTRTYR 92
                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 813199250 177 VKIpddHPLGVYHYHPHhhgsVFLQMGGGMVGAISI 212
Cdd:cd13854   93 FRA---TQYGTSWYHSH----YSAQYGDGVVGPIVI 121
CuRO_1_Diphenol_Ox cd13857
The first cupredoxin domain of fungal laccase, diphenol oxidase; Diphenol oxidase belongs to ...
101-212 9.44e-09

The first cupredoxin domain of fungal laccase, diphenol oxidase; Diphenol oxidase belongs to the laccase family. It catalyzes the initial steps in melanin biosynthesis from diphenols. Melanin is one of the virulence factors of infectious fungi. In the pathogenesis of C. neoformans, melanin pigments have been shown to protect the fungal cells from oxidative and microbicidal activities of host defense systems. Laccase is a blue multicopper oxidase (MCO) which catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259926 [Multi-domain]  Cd Length: 119  Bit Score: 53.42  E-value: 9.44e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 101 NGMFPGPTLCAKPGDTLRITLINQLemdapseglhmntlrdPNTTNIHFHGMHVSPSGVADNVMR----ALKPGESMEVI 176
Cdd:cd13857   25 NGQFPGPLIEANQGDRIVVHVTNEL----------------DEPTSIHWHGLFQNGTNWMDGTAGitqcPIPPGGSFTYN 88
                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 813199250 177 VKIpdDHPLGVYHYHPHHHgsvfLQMGGGMVGAISI 212
Cdd:cd13857   89 FTV--DGQYGTYWYHSHYS----TQYADGLVGPLIV 118
CuRO_1_AAO cd13845
The first cupredoxin domain of plant Ascorbate oxidase; Ascorbate oxidase catalyzes the ...
101-212 1.09e-08

The first cupredoxin domain of plant Ascorbate oxidase; Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. This multicopper oxidase (MCO) is found in cucurbitaceous plants such as pumpkin, cucumber, and melon. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. Ascorbate oxidase belongs to MCO family which couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259914 [Multi-domain]  Cd Length: 120  Bit Score: 53.60  E-value: 1.09e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 101 NGMFPGPTLCAKPGDTLRITLINQLemdaPSEGLhmntlrdpnttNIHFHGMHVSPSGVADNVMR----ALKPGESM--E 174
Cdd:cd13845   25 NGQFPGPTIRATAGDTIVVELENKL----PTEGV-----------AIHWHGIRQRGTPWADGTASvsqcPINPGETFtyQ 89
                         90       100       110
                 ....*....|....*....|....*....|....*...
gi 813199250 175 VIVkipdDHPlGVYHYHPHHHgsvfLQMGGGMVGAISI 212
Cdd:cd13845   90 FVV----DRP-GTYFYHGHYG----MQRSAGLYGSLIV 118
CuRO_1_MCO_like_2 cd13864
The second cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases ...
106-210 3.83e-08

The second cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This subfamily of MCOs is composed of three cupredoxin domains. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259932 [Multi-domain]  Cd Length: 139  Bit Score: 52.54  E-value: 3.83e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 106 GPTLCAKPGDTLRITLINQLemdaPSEGLHMNTLRDPNTTNIHFHGM---------HVSPSGVADNVMRALKPGESMEVI 176
Cdd:cd13864   31 GPTIRVKSGDTLNLLVTNHL----CNEQELSKIWQDYCPTSIHFHGLvlenfgkqlANLVDGVPGLTQYPIGVGESYWYN 106
                         90       100       110
                 ....*....|....*....|....*....|....
gi 813199250 177 VKIPDDhPLGVYHYHPHHhgSVflQMGGGMVGAI 210
Cdd:cd13864  107 FTIPED-TCGTFWYHSHS--SV--QYGDGLRGVF 135
CuRO_D2_2dMcoN_like cd04202
The second cupredoxin domain of bacterial two domain multicopper oxidase McoN and similar ...
444-560 8.61e-08

The second cupredoxin domain of bacterial two domain multicopper oxidase McoN and similar proteins; This family includes bacterial two domain multicopper oxidases (2dMCOs) represented by the McoN from Nitrosomonas europaea. McoN is a trimeric type C blue copper oxidase. Each subunit houses a type 1 copper site in domain 1 and a type 2/type 3 trinuclear copper cluster at the subunit-subunit interface. The 2dMCO is proposed to be a key intermediate in the evolution of three domain MCOs. The biological function of McoN has not been characterized. Multicopper oxidases couple oxidation of substrates with reduction of dioxygen to water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals.


Pssm-ID: 259865 [Multi-domain]  Cd Length: 138  Bit Score: 51.49  E-value: 8.61e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 444 DGAMYKTYYMNGMLFdPNVR-YKMKLGQLYEWTLENVLsaeEKNHPFHMHTNPFQIVSSShGNGLDHSIGDWRDTITLPF 522
Cdd:cd04202   23 EGMDFNYFTINGKSF-PATPpLVVKEGDRVRIRLINLS---MDHHPMHLHGHFFLVTATD-GGPIPGSAPWPKDTLNVAP 97
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 813199250 523 GGNVTIRFRpVDFTGLIAAHCHILGH----SDAGMLMLIEIQ 560
Cdd:cd04202   98 GERYDIEFV-ADNPGDWMFHCHKLHHamngMGGGMMTLIGYE 138
laccase TIGR03389
laccase, plant; Members of this protein family include the copper-containing enzyme laccase ...
101-555 1.19e-07

laccase, plant; Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate.


Pssm-ID: 274556 [Multi-domain]  Cd Length: 539  Bit Score: 54.36  E-value: 1.19e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  101 NGMFPGPTLCAKPGDTLRITLINQLEMdapseglhmntlrdpNTTnIHFHGMHVSPSGVADN----VMRALKPGESM--E 174
Cdd:TIGR03389  28 NGKFPGPTLYAREGDTVIVNVTNNVQY---------------NVT-IHWHGVRQLRNGWADGpayiTQCPIQPGQSYvyN 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  175 VIVKIPDdhplGVYHYHPHhhgsvFLQMGGGMVGAISIQDSVDdvdnvlvlQAYGF-KGGMLGNLIGAANVSKSTLPIDA 253
Cdd:TIGR03389  92 FTITGQR----GTLWWHAH-----ISWLRATVYGAIVILPKPG--------VPYPFpKPDREVPIILGEWWNADVEAVIN 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  254 QLTNM-SHKRVSDAfpdyqprfsapataypsfYTVNGQYHP----------RLTLHDGERKLFRLINAGPTQIVELSVPG 322
Cdd:TIGR03389 155 QANQTgGAPNVSDA------------------YTINGHPGPlyncsskdtfKLTVEPGKTYLLRIINAALNDELFFAIAN 216
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  323 CDVEVFAKDVFPPAETKPEFIIVSPGARVafTVQCHLDGRPmGLFPLVSSPHSRSAAYMGRLTDV----YHGVLGVFDVR 398
Cdd:TIGR03389 217 HTLTVVEVDATYTKPFKTKTIVIGPGQTT--NVLLTADQSP-GRYFMAARPYMDAPGAFDNTTTTailqYKGTSNSAKPI 293
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  399 ATSSPVPALTLPRSNTLRDLRGITDADEPI-------ERFHVTFSSGPPAMRDG------------------------AM 447
Cdd:TIGR03389 294 LPTLPAYNDTAAATNFSNKLRSLNSAQYPAnvpvtidRRLFFTIGLGLDPCPNNtcqgpngtrfaasmnnisfvmpttAL 373
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  448 YKTYYMN-------------------------GMLFDPNVR--YKMKLGQLYEWTLE--NVLSAEekNHPFHMHTNPFQI 498
Cdd:TIGR03389 374 LQAHYFGisgvfttdfpanpptkfnytgtnlpNNLFTTNGTkvVRLKFNSTVELVLQdtSILGSE--NHPIHLHGYNFFV 451
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 813199250  499 VSSSHGN------GLDHSIGD--WRDTITLPFGGNVTIRFRpVDFTGLIAAHCHILGHSDAGMLM 555
Cdd:TIGR03389 452 VGTGFGNfdpkkdPAKFNLVDppERNTVGVPTGGWAAIRFV-ADNPGVWFMHCHLEVHTTWGLKM 515
CuRO_1_CuNIR_like cd04201
Cupredoxin domain 1 of Copper-containing nitrite reductase and two-domain laccase; ...
99-210 1.52e-07

Cupredoxin domain 1 of Copper-containing nitrite reductase and two-domain laccase; Copper-containing nitrite reductase (CuNIR), which catalyzes the reduction of NO2- to NO, is the key enzyme in the denitrification process in denitrifying bacteria. CuNIR contains at least one type 1 copper center and a type 2 copper center, which serves as the active site of the enzyme. A histidine, bound to the Type 2 Cu center, is responsible for binding and reducing nitrite. A Cys-His bridge plays an important role in facilitating rapid electron transfer from the type 1 center to the type 2 center. A reduced type I blue copper protein (pseudoazurin) was found to be a specific electron transfer donor for the copper-containing NIR in bacteria Alcaligenes faecalis. The two-domain laccase (small laccase) in this family differs significantly from all laccases. It resembles two domain nitrite reductase in both sequence homology and structure similarity. It consists of two domains and forms trimers and hence resembles the quaternary structure of nitrite reductases more than that of larger laccases.


Pssm-ID: 259864 [Multi-domain]  Cd Length: 120  Bit Score: 50.18  E-value: 1.52e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  99 SYNGMFPGPTLCAKPGDTLRITLINqlemdaPSEGLHMNtlrdpnttNIHFHGMHVSPSGVAdnvMRALKPGESMEVIVK 178
Cdd:cd04201   25 TFDGDIPGPMLRVREGDTVELHFSN------NPSSTMPH--------NIDFHAATGAGGGAG---ATFIAPGETSTFSFK 87
                         90       100       110
                 ....*....|....*....|....*....|..
gi 813199250 179 IPddhPLGVYHYHPhHHGSVFLQMGGGMVGAI 210
Cdd:cd04201   88 AT---QPGLYVYHC-AVAPVPMHIANGMYGLI 115
CuRO_1_CopA cd13848
The first cupredoxin domain of CopA copper resistance protein family; CopA is a multicopper ...
77-213 1.77e-07

The first cupredoxin domain of CopA copper resistance protein family; CopA is a multicopper oxidase (MCO) related to laccase and L-ascorbate oxidase, both copper-containing enzymes. It is part of the copper-regulatory cue operon, which employs a cytosolic metalloregulatory protein CueR that induces expression of CopA and CueO under copper stress conditions. CopA is a copper efflux P-type ATPase that is located in the inner cell membrane and is involved in copper resistance in bacteria. CopA mutant causes a loss of function including copper tolerance and oxidase activity, and copA transcription is inducible in the presence of copper. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259917 [Multi-domain]  Cd Length: 116  Bit Score: 49.97  E-value: 1.77e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  77 LEITLTV--QTARFTNGPVAFNTrsYNGMFPGPTLCAKPGDTLRITLINQLEMDapseglhmntlrdpntTNIHFHGMHV 154
Cdd:cd13848    1 VEYDLVIaeTPVNIGGKEGEAIT--VNGQVPGPLLRFKEGDDATIRVHNRLDED----------------TSIHWHGLLL 62
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 813199250 155 SPS--GVADNVMRALKPGESMEVIVKIPDDhplGVYHYHPHhhgsVFLQMGGGMVGAISIQ 213
Cdd:cd13848   63 PNDmdGVPGLSFPGIKPGETFTYRFPVRQS---GTYWYHSH----SGLQEQTGLYGPIIID 116
CuRO_D1_2dMcoN_like cd13859
The first cupredoxin domain of bacterial two domain multicopper oxidase McoN and similar ...
77-193 4.35e-07

The first cupredoxin domain of bacterial two domain multicopper oxidase McoN and similar proteins; This family includes bacterial two domain multicopper oxidases (2dMCOs) represented by the McoN from Nitrosomonas europaea. McoN is a trimeric type C blue copper oxidase. Each subunit houses a type 1 copper site in domain 1 and a type 2/type 3 trinuclear copper cluster at the subunit-subunit interface. The 2dMCO is proposed to be a key intermediate in the evolution of three domain MCOs. Its biological function has not been characterized. Multicopper oxidases couple oxidation of substrates with reduction of dioxygen to water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals.


Pssm-ID: 259928 [Multi-domain]  Cd Length: 122  Bit Score: 49.01  E-value: 4.35e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  77 LEITLTVQTARFTNGPV-AFNTRSYNGMFPGPTLCAKPGDTLRITLINqlemdapseglhMNTLrdPNTtnIHFHGMHVS 155
Cdd:cd13859    1 REFEMTIDETVITVVPGlDFKTFAFNGQVPGPLIHVKEGDDLVVHVTN------------NTTL--PHT--IHWHGVLQM 64
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 813199250 156 PS----GVADNVMRALKPGESMEVIVKIpddHPLGVYHYHPH 193
Cdd:cd13859   65 GSwkmdGVPGVTQPAIEPGESFTYKFKA---ERPGTLWYHCH 103
CuRO_3_McoP_like cd13888
The third cupredoxin domain of multicopper oxidase McoP and similar proteins; This subfamily ...
453-560 1.12e-06

The third cupredoxin domain of multicopper oxidase McoP and similar proteins; This subfamily includes archaeal and bacterial multicopper oxidases (MCOs), represented by the extremely thermostable McoP from the hyperthermophilic archaeon Pyrobaculum aerophilum. McoP is an efficient metallo-oxidase that catalyzes the oxidation of cuprous and ferrous ions. It is noteworthy that McoP has three-fold higher catalytic efficiency when using nitrous oxide as electron acceptor than when using dioxygen, the typical oxidizing substrate of multicopper oxidases. McoP may function as a novel archaeal nitrous oxide reductase that is probably involved in the denitrification pathway in archaea. Members of this subfamily contain three cupredoxin domain repeats. The copper ions are bound in several sites; Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259955 [Multi-domain]  Cd Length: 139  Bit Score: 48.33  E-value: 1.12e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 453 MNGMLFDPN---VRYKMKLGQLYEWTLENvlSAEEKNHPFHMHTNPFQI---------VSSSHGNGLDHSIGD--WRDTI 518
Cdd:cd13888   17 INGETWADDpdaFPVERVGGTVEIWELVN--DAASMPHPMHIHGFQFQVlersdsppqVAELAVAPSGRTATDlgWKDTV 94
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 813199250 519 TLPFGGNVTIrfrPVDFTG------LIAAHCHILGHSDAGMLMLIEIQ 560
Cdd:cd13888   95 LVWPGETVRI---AVDFTHdypgdqLYLLHCHNLEHEDDGMMVNVRVP 139
CuRO_3_MCO_like_3 cd13909
The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) ...
487-559 1.15e-06

The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This subfamily of MCOs is composed of three cupredoxin domains. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259976 [Multi-domain]  Cd Length: 137  Bit Score: 48.28  E-value: 1.15e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 813199250 487 HPFHMHTNPFQIVssshgnGLDHSIGDWRDTITLPFGGNVTIRFRpVDFTGLIAAHCHILGHSDAGMLMLIEI 559
Cdd:cd13909   71 HGMHLHGHHFRAI------LPNGALGPWRDTLLMDRGETREIAFV-ADNPGDWLLHCHMLEHAAAGMMSWFRV 136
CuRO_3_AAO cd13893
The third cupredoxin domain of plant Ascorbate oxidase; Ascorbate oxidase catalyzes the ...
486-558 1.15e-06

The third cupredoxin domain of plant Ascorbate oxidase; Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. This multicopper oxidase (MCO) is found in cucurbitaceous plants such as pumpkin, cucumber, and melon. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. Ascorbate oxidase belongs to MCO family which couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259960 [Multi-domain]  Cd Length: 155  Bit Score: 48.57  E-value: 1.15e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 486 NHPFHMHTNPFQIV--------SSSHGNGLDHSIGDWRDTITLPFGGNVTIRFRpVDFTGLIAAHCHILGHSDAGMLMLI 557
Cdd:cd13893   66 QHPWHLHGHDFWVLgyglggfdPAADPSSLNLVNPPMRNTVTIFPYGWTALRFK-ADNPGVWAFHCHIEWHFHMGMGVVF 144

                 .
gi 813199250 558 E 558
Cdd:cd13893  145 A 145
CuRO_1_Fet3p cd13851
The first Cupredoxin domain of multicopper oxidase Fet3P; Fet3p catalyzes the ferroxidase ...
101-212 1.41e-06

The first Cupredoxin domain of multicopper oxidase Fet3P; Fet3p catalyzes the ferroxidase reaction, which couples the oxidation of Fe(II) to Fe(III) and a four-electron reduction of molecular oxygen to water. Fet3p is a type I membrane protein with the amino-terminal oxidase domain in the exocellular space and the carboxyl terminus in the cytoplasm. The periplamic produced Fe(III) is transferred to the permease Ftr1p for import into the cytosol. The four copper ions are inserted post-translationally and are essential for catalytic activity, thus linking copper and iron homeostasis. Like other related multicopper oxidases (MCOs), Fet3p is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259920 [Multi-domain]  Cd Length: 121  Bit Score: 47.26  E-value: 1.41e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 101 NGMFPGPTLCAKPGDTLRITLINQLEmdapseglhmntlrDPNTTnIHFHGMHVSPSGVADNVMRA----LKPGESMEVI 176
Cdd:cd13851   26 NGQWPPPPIEVNKGDTVVIHATNSLG--------------DQPTS-LHFHGLFQNGTNYMDGPVGVtqcpIPPGQSFTYE 90
                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 813199250 177 VKIPDDHplGVYHYHPHHHGsvflQMGGGMVGAISI 212
Cdd:cd13851   91 FTVDTQV--GTYWYHSHDGG----QYPDGLRGPFII 120
CuRO_3_Tv-LCC_like cd13903
The third cupredoxin domain of the fungal laccases similar to Tv-LCC from Trametes Versicolor; ...
487-553 1.79e-06

The third cupredoxin domain of the fungal laccases similar to Tv-LCC from Trametes Versicolor; This subfamily of fungal laccases includes Tv-LCC from Trametes versicolor and Rs-LCC2 from plant pathogenic fungus Rhizoctonia solani. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259970 [Multi-domain]  Cd Length: 147  Bit Score: 47.66  E-value: 1.79e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 813199250 487 HPFHMHTNPFQIVSSSHGNGLDHSIGDWRDTITLPF-GGNVTIRFRpVDFTGLIAAHCHILGHSDAGM 553
Cdd:cd13903   73 HPFHLHGHAFSVVRSAGSNTYNYVNPVRRDVVSVGTpGDGVTIRFV-TDNPGPWFLHCHIDWHLEAGL 139
CuRO_1_Tv-LCC_like cd13856
The first cupredoxin domain of fungal laccases similar to Tv-LCC from Trametes versicolor; ...
85-193 2.14e-06

The first cupredoxin domain of fungal laccases similar to Tv-LCC from Trametes versicolor; This subfamily of fungal laccases includes Tv-LCC from Trametes versicolor and Rs-LCC2 from plant pathogenic fungus Rhizoctonia solani. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259925 [Multi-domain]  Cd Length: 125  Bit Score: 46.95  E-value: 2.14e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  85 TARFTNGPVA---FNtRS---YNGMFPGPTLCAKPGDTLRITLINQLEMDapseglhmnTLRDPntTNIHFHGMHVSPS- 157
Cdd:cd13856    4 TLNIVNTRLApdgFE-RSavlANGQFPGPLITANKGDTFRITVVNQLTDP---------TMRRS--TSIHWHGIFQHGTn 71
                         90       100       110
                 ....*....|....*....|....*....|....*....
gi 813199250 158 ---GVADNVMRALKPGESMEVIVKIPDDhpLGVYHYHPH 193
Cdd:cd13856   72 yadGPAFVTQCPIAPNHSFTYDFTAGDQ--AGTFWYHSH 108
PLN02191 PLN02191
L-ascorbate oxidase
101-210 3.88e-06

L-ascorbate oxidase


Pssm-ID: 177843 [Multi-domain]  Cd Length: 574  Bit Score: 49.63  E-value: 3.88e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 101 NGMFPGPTLCAKPGDTLRITLINQLEmdapSEGLhmntlrdpnttNIHFHGMHV--SP--SGVADNVMRALKPGESM--E 174
Cdd:PLN02191  48 NGQFPGPTIDAVAGDTIVVHLTNKLT----TEGL-----------VIHWHGIRQkgSPwaDGAAGVTQCAINPGETFtyK 112
                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 813199250 175 VIVKIPddhplGVYHYHPHHHgsvfLQMGGGMVGAI 210
Cdd:PLN02191 113 FTVEKP-----GTHFYHGHYG----MQRSAGLYGSL 139
SufI COG2132
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and ...
45-214 5.62e-06

Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA) [Cell cycle control, cell division, chromosome partitioning, Inorganic ion transport and metabolism, Cell wall/membrane/envelope biogenesis;


Pssm-ID: 441735 [Multi-domain]  Cd Length: 423  Bit Score: 48.78  E-value: 5.62e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  45 VVQNFTSASLLALARDLPSLPSPPVYKSHngvlEITLTVQTARFTNgpvAFNTRSYNGMfpGPTLCAKPGDTLRITLINQ 124
Cdd:COG2132  277 VTGAAASAPLPANLAPLPDLEDREAVRTR----ELVLTGGMAGYVW---TINGKAFDPD--RPDLTVKLGERERWTLVND 347
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 125 LEMDAPseglhmntlrdpnttnIHFHGMH----------VSPSGVADNVMraLKPGESMEVIVKIpdDHPLGVYHYHPH- 193
Cdd:COG2132  348 TMMPHP----------------FHLHGHQfqvlsrngkpPPEGGWKDTVL--VPPGETVRILFRF--DNYPGDWMFHCHi 407
                        170       180
                 ....*....|....*....|..
gi 813199250 194 -HHgsvflqMGGGMVGAISIQD 214
Cdd:COG2132  408 lEH------EDAGMMGQFEVVP 423
CuRO_3_CopA cd13896
The third cupredoxin domain of CopA copper resistance protein family; CopA is a multicopper ...
447-558 1.33e-05

The third cupredoxin domain of CopA copper resistance protein family; CopA is a multicopper oxidase (MCO) related to laccase and L-ascorbate oxidase, both copper-containing enzymes. It is part of the copper-regulatory cue operon, which employs a cytosolic metalloregulatory protein CueR that induces expression of CopA and CueO under copper stress conditions. CopA is a copper efflux P-type ATPase that is located in the inner cell membrane and is is involved in copper resistance in bacteria. CopA mutant causes a loss of function including copper tolerance and oxidase activity and copA transcription is inducible in the presence of copper. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259963 [Multi-domain]  Cd Length: 115  Bit Score: 44.55  E-value: 1.33e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 447 MYKTYYMNGMLFDPNVRYKMKLGQLYEWTLENVLSAeekNHPFHMHTNPFQIVSsshGNGLDhsiGDWRDTITLPFGGNV 526
Cdd:cd13896   13 ERYVWTINGKAYPDADPLRVREGERVRIVFVNDTMM---AHPMHLHGHFFQVEN---GNGEY---GPRKDTVLVPPGETV 83
                         90       100       110
                 ....*....|....*....|....*....|..
gi 813199250 527 TIRFRpVDFTGLIAAHCHILGHSDAGMLMLIE 558
Cdd:cd13896   84 SVDFD-ADNPGRWAFHCHNLYHMEAGMMRVVE 114
CuRO_3_Diphenol_Ox cd13904
The third cupredoxin domain of fungal laccase, diphenol oxidase; Diphenol oxidase belongs to ...
486-557 1.67e-05

The third cupredoxin domain of fungal laccase, diphenol oxidase; Diphenol oxidase belongs to the laccase family. It catalyzes the initial steps in melanin biosynthesis from diphenols. Melanin is one of the virulence factors of infectious fungi. In the pathogenesis of C. neoformans, melanin pigments have been shown to protect the fungal cells from oxidative and microbicidal activities of host defense systems. Laccase is a blue multicopper oxidase (MCO) which catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259971 [Multi-domain]  Cd Length: 158  Bit Score: 45.36  E-value: 1.67e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 486 NHPFHMHTNPFQIVSSSHGNGLDHSIGDW---------RDTITLPFGGNVTIRFRPvDFTGLIAAHCHILGHSDAGMLML 556
Cdd:cd13904   77 DHPYHLHGVDFHIVARGSGTLTLEQLANVqynttnplrRDTIVIPGGSWAVLRIPA-DNPGVWALHCHIGWHLAAGFAGV 155

                 .
gi 813199250 557 I 557
Cdd:cd13904  156 V 156
CuRO_1_tcLCC2_insect_like cd13858
The first cupredoxin domain of insect laccases similar to laccase 2 in Tribolium castaneum; ...
101-153 1.79e-05

The first cupredoxin domain of insect laccases similar to laccase 2 in Tribolium castaneum; This multicopper oxidase (MCO) family includes the majority of insect laccases. One member of the family is laccase 2 from Tribolium castaneum. Laccase 2 is required for beetle cuticle tanning. Laccase (polyphenol oxidase EC 1.10.3.2) is a blue multi-copper enzyme that catalyzes the oxidation of a variety of organic substrates coupled to the reduction of molecular oxygen to water. It displays broad substrate specificity, catalyzing the oxidation of a wide variety of aromatic - notably phenolic and inorganic substances. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi, plants and insects. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259927 [Multi-domain]  Cd Length: 105  Bit Score: 43.68  E-value: 1.79e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 813199250 101 NGMFPGPTLCAKPGDTLRITLINQLEMDApseglhmntlrdpntTNIHFHGMH 153
Cdd:cd13858   11 NGQLPGPSIEVCEGDTVVVDVKNRLPGES---------------TTIHWHGIH 48
ascorbase TIGR03388
L-ascorbate oxidase, plant type; Members of this protein family are the copper-containing ...
101-210 3.06e-05

L-ascorbate oxidase, plant type; Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases.


Pssm-ID: 274555 [Multi-domain]  Cd Length: 541  Bit Score: 46.67  E-value: 3.06e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  101 NGMFPGPTLCAKPGDTLRITLINQLEmdapSEGLhmntlrdpnttNIHFHGMHV--SP--SGVADNVMRALKPGESMevI 176
Cdd:TIGR03388  26 NGQFPGPTIRAQAGDTIVVELTNKLH----TEGV-----------VIHWHGIRQigTPwaDGTAGVTQCAINPGETF--I 88
                          90       100       110
                  ....*....|....*....|....*....|....
gi 813199250  177 VKIPDDHPlGVYHYHPHHHgsvfLQMGGGMVGAI 210
Cdd:TIGR03388  89 YNFVVDRP-GTYFYHGHYG----MQRSAGLYGSL 117
CuRO_3_MCO_like_2 cd13908
The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) ...
429-558 3.27e-05

The third cupredoxin domain of uncharacterized multicopper oxidase; Multicopper Oxidases (MCOs) are multi-domain enzymes that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs oxidize their substrate by accepting electrons at a mononuclear copper centre and transferring them to a trinuclear copper centre which binds a dioxygen. The dioxygen, following the transfer of four electrons, is reduced to two molecules of water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals. This subfamily of MCOs is composed of three cupredoxin domains. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259975 [Multi-domain]  Cd Length: 122  Bit Score: 43.59  E-value: 3.27e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 429 ERFHVTFSSGPPAMRDgamYKTYYMNGMLF-DPNVRYKMKLGQLYEWTLENvlsAEEKNHPFHMHTNPFQIVSSShGNGL 507
Cdd:cd13908    2 ETIDMTFEKRNAGDGG---FNLWTINGKSYpDEDPPLVVQQGRRYRLVFRN---ASDDAHPMHLHRHTFEVTRID-GKPT 74
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 813199250 508 DhsiGDWRDTITLPFGGNVTIRFRPvDFTGLIAAHCHILGHSDAGMLMLIE 558
Cdd:cd13908   75 S---GLRKDVVMLGGYQRVEVDFVA-DNPGLTLFHCHQQLHMDYGFMALFK 121
Cupredoxin cd00920
Cupredoxin superfamily; Cupredoxins contain type I copper centers and are involved in ...
447-558 3.52e-05

Cupredoxin superfamily; Cupredoxins contain type I copper centers and are involved in inter-molecular electron transfer reactions. Cupredoxins are blue copper proteins, having an intense blue color due to the presence of a mononuclear type 1 (T1) copper site. Structurally, the cupredoxin-like fold consists of a beta-sandwich with 7 strands in 2 beta-sheets, which is arranged in a Greek-key beta-barrel. Some of these proteins have lost the ability to bind copper. The majority of family members contain multiple cupredoxin domain repeats: ceruloplasmin and the coagulation factors V/VIII have six repeats; laccase, ascorbate oxidase, spore coat protein A, and multicopper oxidase CueO contain three repeats; and nitrite reductase has two repeats. Others are mono-domain cupredoxins, such as plastocyanin, pseudoazurin, plantacyanin, azurin, rusticyanin, stellacyanin, quinol oxidase, and the periplasmic domain of cytochrome c oxidase subunit II.


Pssm-ID: 259860 [Multi-domain]  Cd Length: 110  Bit Score: 42.99  E-value: 3.52e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 447 MYKTYYMNGMLFDPNVrYKMKLGQLYEWTLENVLSAeekNHPFHMHTNPFQIVSSShgnglDHSIGDWRDTITLPFGGNV 526
Cdd:cd00920    9 GWSFTYNGVLLFGPPV-LVVPVGDTVRVQFVNKLGE---NHSVTIAGFGVPVVAMA-----GGANPGLVNTLVIGPGESA 79
                         90       100       110
                 ....*....|....*....|....*....|..
gi 813199250 527 TIRFrPVDFTGLIAAHCHILGHSDAGMLMLIE 558
Cdd:cd00920   80 EVTF-TTDQAGVYWFYCTIPGHNHAGMVGTIN 110
CuRO_3_LCC_plant cd13897
The third cupredoxin domain of the plant laccases; Laccase is a blue multicopper oxidase (MCO) ...
478-555 9.19e-05

The third cupredoxin domain of the plant laccases; Laccase is a blue multicopper oxidase (MCO) which catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Plants usually express multiple laccase genes, but their precise physiological/biochemical roles remain largely unclear. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259964 [Multi-domain]  Cd Length: 139  Bit Score: 42.63  E-value: 9.19e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 478 NVLSAEekNHPFHMHTNPFQIVSSSHGNgLDHSIGD---------WRDTITLPFGGNVTIRFRpVDFTGLIAAHCHILGH 548
Cdd:cd13897   50 SLLAAE--NHPMHLHGFDFYVVGRGFGN-FDPSTDPatfnlvdppLRNTVGVPRGGWAAIRFV-ADNPGVWFMHCHFERH 125

                 ....*..
gi 813199250 549 SDAGMLM 555
Cdd:cd13897  126 TSWGMAT 132
CuRO_1_AAO_like_2 cd13847
The first cupredoxin domain of Ascorbate oxidase homologs; This family includes fungal ...
101-193 9.30e-05

The first cupredoxin domain of Ascorbate oxidase homologs; This family includes fungal proteins with similarity to ascorbate oxidase. Ascorbate oxidase catalyzes the oxidation of ascorbic acid to dehydroascorbic acid. It can detect levels of ascorbic acid and eliminate it. The biological function of ascorbate oxidase is still not clear. Ascorbate oxidase belongs to multicopper oxidase (MCO) family which couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259916 [Multi-domain]  Cd Length: 117  Bit Score: 42.13  E-value: 9.30e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 101 NGMFPGPTLCAKPGDTLRITLINQLEmdapseglhmntlrDPNTTnIHFHGMHVSPSGVADNVMRA----LKPGESMEVI 176
Cdd:cd13847   21 NGSFPGPELRVQEGQHLWVRVYNDLE--------------AGNTT-MHFHGLSQYMSPFSDGTPLAsqwpIPPGKFFDYE 85
                         90
                 ....*....|....*...
gi 813199250 177 VKI-PDDHplGVYHYHPH 193
Cdd:cd13847   86 FPLeAGDA--GTYYYHSH 101
CuRO_3_CotA_like cd13891
The third Cupredoxin domain of bacterial laccases including CotA, a bacterial endospore coat ...
486-553 3.57e-04

The third Cupredoxin domain of bacterial laccases including CotA, a bacterial endospore coat component; CotA protein is an abundant component of the outer coat layer in bacterial endospore coat and is required for spore resistance against hydrogen peroxide and UV light. CotA belongs to the laccase-like multicopper oxidase (MCO) family, which are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259958 [Multi-domain]  Cd Length: 143  Bit Score: 41.12  E-value: 3.57e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 486 NHPFHMHTNPFQI-------VSSSHGNGLDHSIGD----------WRDTITLPFGGNVTIRFRPVDFTGLIAAHCHILGH 548
Cdd:cd13891   53 AHPIHLHLVQFQVldrqpfdVDEYNATGEIYYTGPprppapnergWKDTVRAYPGEVTRIIVRFDGPEGGYVWHCHILEH 132

                 ....*
gi 813199250 549 SDAGM 553
Cdd:cd13891  133 EDNEM 137
PLN02604 PLN02604
oxidoreductase
101-212 7.01e-04

oxidoreductase


Pssm-ID: 215324 [Multi-domain]  Cd Length: 566  Bit Score: 42.54  E-value: 7.01e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 101 NGMFPGPTLCAKPGDTLRITLINQLEMDapseglhmntlrdpnTTNIHFHGMHV--SP--SGVADNVMRALKPGESMevI 176
Cdd:PLN02604  49 NGRSPGPTILAQQGDTVIVELKNSLLTE---------------NVAIHWHGIRQigTPwfDGTEGVTQCPILPGETF--T 111
                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 813199250 177 VKIPDDHPlGVYHYHPHHHgsvfLQMGGGMVGAISI 212
Cdd:PLN02604 112 YEFVVDRP-GTYLYHAHYG----MQREAGLYGSIRV 142
CuRO_D2_2dMcoN_like cd04202
The second cupredoxin domain of bacterial two domain multicopper oxidase McoN and similar ...
95-210 8.68e-04

The second cupredoxin domain of bacterial two domain multicopper oxidase McoN and similar proteins; This family includes bacterial two domain multicopper oxidases (2dMCOs) represented by the McoN from Nitrosomonas europaea. McoN is a trimeric type C blue copper oxidase. Each subunit houses a type 1 copper site in domain 1 and a type 2/type 3 trinuclear copper cluster at the subunit-subunit interface. The 2dMCO is proposed to be a key intermediate in the evolution of three domain MCOs. The biological function of McoN has not been characterized. Multicopper oxidases couple oxidation of substrates with reduction of dioxygen to water. These MCOs are capable of oxidizing a vast range of substrates, varying from aromatic to inorganic compounds such as metals.


Pssm-ID: 259865 [Multi-domain]  Cd Length: 138  Bit Score: 39.93  E-value: 8.68e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250  95 FNTRSYNGM-FPG-PTLCAKPGDTLRITLINQLEMDAPseglhmntlrdpnttnIHFHGMH---VSPSGV---------A 160
Cdd:cd04202   27 FNYFTINGKsFPAtPPLVVKEGDRVRIRLINLSMDHHP----------------MHLHGHFflvTATDGGpipgsapwpK 90
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 813199250 161 DNVMRAlkPGESMEVIVKIpdDHPlGVYHYHPH--HHGSVflQMGGGMVGAI 210
Cdd:cd04202   91 DTLNVA--PGERYDIEFVA--DNP-GDWMFHCHklHHAMN--GMGGGMMTLI 135
CuRO_3_MaLCC_like cd13901
The third cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus ...
487-557 9.43e-04

The third cupredoxin domain of the fungal laccases similar to Ma-LCC from Melanocarpus albomyces; The subfamily of fungal laccases includes Ma-LCC and similar proteins. Ma-LCC is a multicopper oxidase (MCO) from Melanocarpus albomyces. Its crystal structure contains all four coppers at the mono- and trinuclear copper centers. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259968 [Multi-domain]  Cd Length: 157  Bit Score: 39.90  E-value: 9.43e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 813199250 487 HPFHMHTNPFQIVSSSHGNGL-DHSIGDW-----RDTITLPFGGNVTIRFrPVDFTGLIAAHCHILGHSDAGMLMLI 557
Cdd:cd13901   81 HPIHLHGHDFYILAQGTGTFDdDGTILNLnnpprRDVAMLPAGGYLVIAF-KTDNPGAWLMHCHIAWHASGGLALQF 156
PLN02604 PLN02604
oxidoreductase
434-558 2.03e-03

oxidoreductase


Pssm-ID: 215324 [Multi-domain]  Cd Length: 566  Bit Score: 41.00  E-value: 2.03e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 434 TFSSGPPAmrDGAMYKTYYMNGMLFDPNVR-----YKMKLGQLYEWTLENVLSAEEKN---HPFHMHTNPFQIVssSHGN 505
Cdd:PLN02604 408 AFDQTPPP--EGYDFANYDIYAKPNNSNATssdsiYRLQFNSTVDIILQNANTMNANNsetHPWHLHGHDFWVL--GYGE 483
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 813199250 506 GLDHSIGDWR-----DTI---TLPFG--GNVTIRFRpVDFTGLIAAHCHILGHSDAGMLMLIE 558
Cdd:PLN02604 484 GKFNMSSDPKkynlvDPImknTVPVHpyGWTALRFR-ADNPGVWAFHCHIESHFFMGMGVVFE 545
CuRO_3_Abr2_like cd13898
The third cupredoxin domain of a group of fungal Laccases similar to Abr2 from Aspergillus ...
487-557 2.85e-03

The third cupredoxin domain of a group of fungal Laccases similar to Abr2 from Aspergillus fumigatus; Abr2 is involved in conidial pigment biosynthesis in Aspergillus fumigatus. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. Laccase has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Like other related multicopper oxidases (MCOs), laccase is composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259965 [Multi-domain]  Cd Length: 164  Bit Score: 38.78  E-value: 2.85e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 813199250 487 HPFHMHTNPFQIVSSSHGNGLDHSIGD---------------WRDTITLPFGGN----VTIRFRpVDFTGLIAAHCHILG 547
Cdd:cd13898   73 HPIHKHGNKAFVIGTGTGPFNWSSVAEaaeaapenfnlvnppLRDTFTTPPSTEgpswLVIRYH-VVNPGAWLLHCHIQS 151
                         90
                 ....*....|
gi 813199250 548 HSDAGMLMLI 557
Cdd:cd13898  152 HLAGGMAVVL 161
CuRO_1_BOD_CotA_like cd13844
The first Cupredoxin domain of Bilirubin oxidase (BOD), the bacterial endospore coat component ...
99-156 5.35e-03

The first Cupredoxin domain of Bilirubin oxidase (BOD), the bacterial endospore coat component CotA, and similar proteins; Bilirubin oxidase (BOD) catalyzes the oxidation of bilirubin to biliverdin and the four-electron reduction of molecular oxygen to water. CotA protein is an abundant component of the outer coat layer in bacterial endospore coat and it is required for spore resistance against hydrogen peroxide and UV light. Also included in this subfamily are phenoxazinone synthase (PHS), which catalyzes the oxidative coupling of substituted o-aminophenols to produce phenoxazinones. PHS has been shown to participate in diverse biological functions such as spore pigmentation and biosynthesis of the antibiotic grixazone. These are Laccase-like multicopper oxidases (MCOs) that are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.


Pssm-ID: 259913 [Multi-domain]  Cd Length: 162  Bit Score: 38.04  E-value: 5.35e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 813199250  99 SYNGMFPGPTLCAKPGDTLRITLINQLEMDAPSEGLHMNTLRDPNT-----------TNIHFHGMHVSP 156
Cdd:cd13844   30 SNSTSYPGPTIEARRGVPVRVTWVNNLPDKHHLPLDDTLPSTEEATpgaeppvppvpTVVHLHGGEVPP 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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