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Conserved domains on  [gi|731423116|ref|XP_010662373|]
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protein PSK SIMULATOR 1 [Vitis vinifera]

Protein Classification

DUF668 and DUF3475 domain-containing protein( domain architecture ID 10571731)

DUF668 and DUF3475 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF668 pfam05003
Protein of unknown function (DUF668); This entry represents the C-terminal domain of PSI ...
 309-395 3.87e-44

Protein of unknown function (DUF668); This entry represents the C-terminal domain of PSI proteins from Arabidopsis. This domain is found associated with pfam11961. PSI1 was identified as a gene that is co-expressed with the phytosulfokine (PSK) receptor genes PSKR1 and PSKR2 in Arabidopsis thaliana. PSI proteins are plant-specific and promote growth.


:

Pssm-ID: 428251  Cd Length: 88  Bit Score: 149.63  E-value: 3.87e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 731423116  309 TLGATALALHYANLIIVIEKMIKSPQLVGVDARDDVYGMLPDSIRSSLRARLKGVGFSAS-DPVLAGEWKDALGRILAWL 387
Cdd:pfam05003   1 TLGGAGLALHYANVIIQIEKLLSRPHLIPPNARDDLYQMLPPSIRSALRAKLRSYWKKLGyDELLAAEWKAAMEKILEWL 80


                  ....*...
gi 731423116  388 SPLAHNMI 395
Cdd:pfam05003  81 VPLAHNTI 88
DUF3475 pfam11961
Domain of unknown function (DUF3475); This entry represents the N-terminal domain of PSI ...
 39-95 5.33e-26

Domain of unknown function (DUF3475); This entry represents the N-terminal domain of PSI proteins from Arabidopsis. This domain is found associated with pfam05003. PSI1 was identified as a gene that is co-expressed with the phytosulfokine (PSK) receptor genes PSKR1 and PSKR2 in Arabidopsis thaliana. PSI proteins are plant-specific and promote growth.


:

Pssm-ID: 432223  Cd Length: 57  Bit Score: 99.88  E-value: 5.33e-26
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 731423116   39 VLAFEIAGLMSKLLHLWQSLSDKSIIRVRNDAISLEGVRKIVSNDEAFLLGLACAEM 95
Cdd:pfam11961   1 ILAFEVANTMSKLVHLWQSLSDKEVARLREEILRSEGVRKLVSDDESFLLRLACAEK 57
 
Name Accession Description Interval E-value
DUF668 pfam05003
Protein of unknown function (DUF668); This entry represents the C-terminal domain of PSI ...
 309-395 3.87e-44

Protein of unknown function (DUF668); This entry represents the C-terminal domain of PSI proteins from Arabidopsis. This domain is found associated with pfam11961. PSI1 was identified as a gene that is co-expressed with the phytosulfokine (PSK) receptor genes PSKR1 and PSKR2 in Arabidopsis thaliana. PSI proteins are plant-specific and promote growth.


Pssm-ID: 428251  Cd Length: 88  Bit Score: 149.63  E-value: 3.87e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 731423116  309 TLGATALALHYANLIIVIEKMIKSPQLVGVDARDDVYGMLPDSIRSSLRARLKGVGFSAS-DPVLAGEWKDALGRILAWL 387
Cdd:pfam05003   1 TLGGAGLALHYANVIIQIEKLLSRPHLIPPNARDDLYQMLPPSIRSALRAKLRSYWKKLGyDELLAAEWKAAMEKILEWL 80


                  ....*...
gi 731423116  388 SPLAHNMI 395
Cdd:pfam05003  81 VPLAHNTI 88
DUF3475 pfam11961
Domain of unknown function (DUF3475); This entry represents the N-terminal domain of PSI ...
 39-95 5.33e-26

Domain of unknown function (DUF3475); This entry represents the N-terminal domain of PSI proteins from Arabidopsis. This domain is found associated with pfam05003. PSI1 was identified as a gene that is co-expressed with the phytosulfokine (PSK) receptor genes PSKR1 and PSKR2 in Arabidopsis thaliana. PSI proteins are plant-specific and promote growth.


Pssm-ID: 432223  Cd Length: 57  Bit Score: 99.88  E-value: 5.33e-26
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 731423116   39 VLAFEIAGLMSKLLHLWQSLSDKSIIRVRNDAISLEGVRKIVSNDEAFLLGLACAEM 95
Cdd:pfam11961   1 ILAFEVANTMSKLVHLWQSLSDKEVARLREEILRSEGVRKLVSDDESFLLRLACAEK 57
 
Name Accession Description Interval E-value
DUF668 pfam05003
Protein of unknown function (DUF668); This entry represents the C-terminal domain of PSI ...
 309-395 3.87e-44

Protein of unknown function (DUF668); This entry represents the C-terminal domain of PSI proteins from Arabidopsis. This domain is found associated with pfam11961. PSI1 was identified as a gene that is co-expressed with the phytosulfokine (PSK) receptor genes PSKR1 and PSKR2 in Arabidopsis thaliana. PSI proteins are plant-specific and promote growth.


Pssm-ID: 428251  Cd Length: 88  Bit Score: 149.63  E-value: 3.87e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 731423116  309 TLGATALALHYANLIIVIEKMIKSPQLVGVDARDDVYGMLPDSIRSSLRARLKGVGFSAS-DPVLAGEWKDALGRILAWL 387
Cdd:pfam05003   1 TLGGAGLALHYANVIIQIEKLLSRPHLIPPNARDDLYQMLPPSIRSALRAKLRSYWKKLGyDELLAAEWKAAMEKILEWL 80


                  ....*...
gi 731423116  388 SPLAHNMI 395
Cdd:pfam05003  81 VPLAHNTI 88
DUF3475 pfam11961
Domain of unknown function (DUF3475); This entry represents the N-terminal domain of PSI ...
 39-95 5.33e-26

Domain of unknown function (DUF3475); This entry represents the N-terminal domain of PSI proteins from Arabidopsis. This domain is found associated with pfam05003. PSI1 was identified as a gene that is co-expressed with the phytosulfokine (PSK) receptor genes PSKR1 and PSKR2 in Arabidopsis thaliana. PSI proteins are plant-specific and promote growth.


Pssm-ID: 432223  Cd Length: 57  Bit Score: 99.88  E-value: 5.33e-26
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 731423116   39 VLAFEIAGLMSKLLHLWQSLSDKSIIRVRNDAISLEGVRKIVSNDEAFLLGLACAEM 95
Cdd:pfam11961   1 ILAFEVANTMSKLVHLWQSLSDKEVARLREEILRSEGVRKLVSDDESFLLRLACAEK 57
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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