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Conserved domains on  [gi|731401290|ref|XP_010654234|]
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BEL1-like homeodomain protein 9 [Vitis vinifera]

Protein Classification

BEL1-like homeodomain protein( domain architecture ID 11167014)

BEL1-like homeodomain protein is a plant-specific transcription factor involved in the transcriptional regulation of key developmental processes similar to Arabidopsis thaliana BEL1 which is involved in ovule development; is a DNA-binding protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
POX pfam07526
Associated with HOX; The function of this domain is unknown. It is often found in plant ...
 247-372 1.12e-52

Associated with HOX; The function of this domain is unknown. It is often found in plant proteins associated with pfam00046.


:

Pssm-ID: 429514  Cd Length: 139  Bit Score: 177.46  E-value: 1.12e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 731401290  247 ILKGSRFLKPAQQLLEEFCDVGCGLYAERVSADSSMMDPPME-------------SLSGTGIVDDPLSCGDGGEHRRKKS 313
Cdd:pfam07526   1 VLLRSRYLKPAQELLDEVVSVGGKSIASKSSSSSVSKKEDSEdggssqsgggeggGGSSSGGGSPSLSSAERQELQRKKA 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 731401290  314 RLISMLDEVYRRYKHYYQQMQAVVASFESVAGLGNAAPYADLALKAMSKHFRCLKNAIT 372
Cdd:pfam07526  81 KLLSMLDEVDRRYRQYYDQMQAVVSSFEAVAGLGAAKPYTALALRTISRHFRCLRDAIS 139
Homeobox_KN pfam05920
Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to ...
 438-476 1.34e-19

Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to human and plants. They were first identified as TALE homeobox genes in eukaryotes, (including KNOX and MEIS genes). They have been recently classified.


:

Pssm-ID: 428673  Cd Length: 39  Bit Score: 82.18  E-value: 1.34e-19
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 731401290  438 LFEHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVR 476
Cdd:pfam05920   1 LYEHLHNPYPSEEEKAELAKETGLSRKQISNWFINARRR 39
 
Name Accession Description Interval E-value
POX pfam07526
Associated with HOX; The function of this domain is unknown. It is often found in plant ...
 247-372 1.12e-52

Associated with HOX; The function of this domain is unknown. It is often found in plant proteins associated with pfam00046.


Pssm-ID: 429514  Cd Length: 139  Bit Score: 177.46  E-value: 1.12e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 731401290  247 ILKGSRFLKPAQQLLEEFCDVGCGLYAERVSADSSMMDPPME-------------SLSGTGIVDDPLSCGDGGEHRRKKS 313
Cdd:pfam07526   1 VLLRSRYLKPAQELLDEVVSVGGKSIASKSSSSSVSKKEDSEdggssqsgggeggGGSSSGGGSPSLSSAERQELQRKKA 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 731401290  314 RLISMLDEVYRRYKHYYQQMQAVVASFESVAGLGNAAPYADLALKAMSKHFRCLKNAIT 372
Cdd:pfam07526  81 KLLSMLDEVDRRYRQYYDQMQAVVSSFEAVAGLGAAKPYTALALRTISRHFRCLRDAIS 139
POX smart00574
domain associated with HOX domains;
242-373 4.90e-52

domain associated with HOX domains;


Pssm-ID: 214728  Cd Length: 140  Bit Score: 175.64  E-value: 4.90e-52
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 731401290   242 TGYASILKGSRFLKPAQQLLEEFCDVGCGLYAERV--SADSSMMDPP----MESLSGTGIVDD--PLSCGDGGEHRRKKS 313
Cdd:smart00574   1 TGGVFILRNSKYLKAAQELLDEFCNVGRGSSKKKKqsGNDSPVSTSSneggGENLSGGSSSSEvpPLSTAERQELQRKKA 80

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 731401290   314 RLISMLDEVYRRYKHYYQQMQAVVASFESVAGLGNAAPYADLALKAMSKHFRCLKNAITD 373
Cdd:smart00574  81 KLLSMLEEVDRRYKHYYEQMQTVVSSFDQAAGLGAAKPYTALALKTISRHFRCLKDAIAG 140
Homeobox_KN pfam05920
Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to ...
 438-476 1.34e-19

Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to human and plants. They were first identified as TALE homeobox genes in eukaryotes, (including KNOX and MEIS genes). They have been recently classified.


Pssm-ID: 428673  Cd Length: 39  Bit Score: 82.18  E-value: 1.34e-19
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 731401290  438 LFEHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVR 476
Cdd:pfam05920   1 LYEHLHNPYPSEEEKAELAKETGLSRKQISNWFINARRR 39
homeodomain cd00086
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ...
 420-481 9.38e-13

Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.


Pssm-ID: 238039 [Multi-domain]  Cd Length: 59  Bit Score: 63.03  E-value: 9.38e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 731401290 420 WRPQRGLPERAVTVLRAWlFEHflHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRLWKPM 481
Cdd:cd00086    1 RRKRTRFTPEQLEELEKE-FEK--NPYPSREEREELAKELGLTERQVKIWFQNRRAKLKRSE 59
HOX smart00389
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ...
 426-478 2.86e-10

Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes


Pssm-ID: 197696 [Multi-domain]  Cd Length: 57  Bit Score: 56.10  E-value: 2.86e-10
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 731401290   426 LPERAVTVLRAWlFEHflHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRLW 478
Cdd:smart00389   8 FTPEQLEELEKE-FQK--NPYPSREEREELAKKLGLSERQVKVWFQNRRAKWK 57
 
Name Accession Description Interval E-value
POX pfam07526
Associated with HOX; The function of this domain is unknown. It is often found in plant ...
 247-372 1.12e-52

Associated with HOX; The function of this domain is unknown. It is often found in plant proteins associated with pfam00046.


Pssm-ID: 429514  Cd Length: 139  Bit Score: 177.46  E-value: 1.12e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 731401290  247 ILKGSRFLKPAQQLLEEFCDVGCGLYAERVSADSSMMDPPME-------------SLSGTGIVDDPLSCGDGGEHRRKKS 313
Cdd:pfam07526   1 VLLRSRYLKPAQELLDEVVSVGGKSIASKSSSSSVSKKEDSEdggssqsgggeggGGSSSGGGSPSLSSAERQELQRKKA 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 731401290  314 RLISMLDEVYRRYKHYYQQMQAVVASFESVAGLGNAAPYADLALKAMSKHFRCLKNAIT 372
Cdd:pfam07526  81 KLLSMLDEVDRRYRQYYDQMQAVVSSFEAVAGLGAAKPYTALALRTISRHFRCLRDAIS 139
POX smart00574
domain associated with HOX domains;
242-373 4.90e-52

domain associated with HOX domains;


Pssm-ID: 214728  Cd Length: 140  Bit Score: 175.64  E-value: 4.90e-52
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 731401290   242 TGYASILKGSRFLKPAQQLLEEFCDVGCGLYAERV--SADSSMMDPP----MESLSGTGIVDD--PLSCGDGGEHRRKKS 313
Cdd:smart00574   1 TGGVFILRNSKYLKAAQELLDEFCNVGRGSSKKKKqsGNDSPVSTSSneggGENLSGGSSSSEvpPLSTAERQELQRKKA 80

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 731401290   314 RLISMLDEVYRRYKHYYQQMQAVVASFESVAGLGNAAPYADLALKAMSKHFRCLKNAITD 373
Cdd:smart00574  81 KLLSMLEEVDRRYKHYYEQMQTVVSSFDQAAGLGAAKPYTALALKTISRHFRCLKDAIAG 140
Homeobox_KN pfam05920
Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to ...
 438-476 1.34e-19

Homeobox KN domain; This is a homeobox transcription factor KN domain conserved from fungi to human and plants. They were first identified as TALE homeobox genes in eukaryotes, (including KNOX and MEIS genes). They have been recently classified.


Pssm-ID: 428673  Cd Length: 39  Bit Score: 82.18  E-value: 1.34e-19
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 731401290  438 LFEHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVR 476
Cdd:pfam05920   1 LYEHLHNPYPSEEEKAELAKETGLSRKQISNWFINARRR 39
homeodomain cd00086
Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic ...
 420-481 9.38e-13

Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.


Pssm-ID: 238039 [Multi-domain]  Cd Length: 59  Bit Score: 63.03  E-value: 9.38e-13
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 731401290 420 WRPQRGLPERAVTVLRAWlFEHflHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRLWKPM 481
Cdd:cd00086    1 RRKRTRFTPEQLEELEKE-FEK--NPYPSREEREELAKELGLTERQVKIWFQNRRAKLKRSE 59
HOX smart00389
Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key ...
 426-478 2.86e-10

Homeodomain; DNA-binding factors that are involved in the transcriptional regulation of key developmental processes


Pssm-ID: 197696 [Multi-domain]  Cd Length: 57  Bit Score: 56.10  E-value: 2.86e-10
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|...
gi 731401290   426 LPERAVTVLRAWlFEHflHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRLW 478
Cdd:smart00389   8 FTPEQLEELEKE-FQK--NPYPSREEREELAKKLGLSERQVKVWFQNRRAKWK 57
Homeodomain pfam00046
Homeodomain;
440-479 9.23e-06

Homeodomain;


Pssm-ID: 459649 [Multi-domain]  Cd Length: 57  Bit Score: 43.26  E-value: 9.23e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 731401290  440 EHFL-HPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRlWK 479
Cdd:pfam00046  17 KEFQeNPYPSAEEREELAAQLGLTERQVKVWFQNRRAK-WK 56
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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