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Conserved domains on  [gi|569009449|ref|XP_006541630|]
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testis-expressed protein 13D-like [Mus musculus]

Protein Classification

TEX13 and zf-RanBP domain-containing protein( domain architecture ID 10633548)

TEX13 and zf-RanBP domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TEX13 pfam15186
Testis-expressed sequence 13 protein family; The function of this family of proteins has not, ...
 6-150 1.98e-68

Testis-expressed sequence 13 protein family; The function of this family of proteins has not, as yet, been determined. However, members are thought to be encoded for by spermatogonially-expressed, germ-cell-specific genes. This family of proteins is found in eukaryotes. Proteins in this family are typically between 177 and 384 amino acids in length. There are two conserved sequence motifs: FIN and LAL.


:

Pssm-ID: 464551 [Multi-domain]  Cd Length: 150  Bit Score: 216.76  E-value: 1.98e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009449    6 GDHSTGFRHSEVIRFINNEILMNGGGPEFYLAFRMRPWNEIEDQLRAILIDPQVPRSLKRACTWSALALGVRIAARQREQ 85
Cdd:pfam15186   2 GDPSSGFRHGEVVAFINEEVLRNGGGPEFYLENRSLSWEEVEDKLRAILEDPEVPREAKEACAWSALALGVRFAARQREL 81

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 569009449   86 QAYMVGLSQDAFGQLPSAPRASVSELWQLRQQ----REEAVTQLISTQAALQQAMRECDLLRRRLHHVE 150
Cdd:pfam15186  82 QARRVQWLQDQAEEHESATWALASELQRLREQqemeRKEAAFQLQLTQAALAQVQKERDLLRWKLLQAE 150
zf-RanBP pfam00641
Zn-finger in Ran binding protein and others;
497-517 2.30e-03

Zn-finger in Ran binding protein and others;


:

Pssm-ID: 395516 [Multi-domain]  Cd Length: 30  Bit Score: 35.79  E-value: 2.30e-03
                          10        20
                  ....*....|....*....|.
gi 569009449  497 WVCPRCKSMNFSWRKVCYKCK 517
Cdd:pfam00641   5 WDCSKCLVQNFATSTKCVACQ 25
 
Name Accession Description Interval E-value
TEX13 pfam15186
Testis-expressed sequence 13 protein family; The function of this family of proteins has not, ...
 6-150 1.98e-68

Testis-expressed sequence 13 protein family; The function of this family of proteins has not, as yet, been determined. However, members are thought to be encoded for by spermatogonially-expressed, germ-cell-specific genes. This family of proteins is found in eukaryotes. Proteins in this family are typically between 177 and 384 amino acids in length. There are two conserved sequence motifs: FIN and LAL.


Pssm-ID: 464551 [Multi-domain]  Cd Length: 150  Bit Score: 216.76  E-value: 1.98e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009449    6 GDHSTGFRHSEVIRFINNEILMNGGGPEFYLAFRMRPWNEIEDQLRAILIDPQVPRSLKRACTWSALALGVRIAARQREQ 85
Cdd:pfam15186   2 GDPSSGFRHGEVVAFINEEVLRNGGGPEFYLENRSLSWEEVEDKLRAILEDPEVPREAKEACAWSALALGVRFAARQREL 81

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 569009449   86 QAYMVGLSQDAFGQLPSAPRASVSELWQLRQQ----REEAVTQLISTQAALQQAMRECDLLRRRLHHVE 150
Cdd:pfam15186  82 QARRVQWLQDQAEEHESATWALASELQRLREQqemeRKEAAFQLQLTQAALAQVQKERDLLRWKLLQAE 150
zf-RanBP pfam00641
Zn-finger in Ran binding protein and others;
497-517 2.30e-03

Zn-finger in Ran binding protein and others;


Pssm-ID: 395516 [Multi-domain]  Cd Length: 30  Bit Score: 35.79  E-value: 2.30e-03
                          10        20
                  ....*....|....*....|.
gi 569009449  497 WVCPRCKSMNFSWRKVCYKCK 517
Cdd:pfam00641   5 WDCSKCLVQNFATSTKCVACQ 25
ZnF_RBZ smart00547
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
 497-517 2.83e-03

Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.


Pssm-ID: 197784 [Multi-domain]  Cd Length: 25  Bit Score: 35.37  E-value: 2.83e-03
                           10        20
                   ....*....|....*....|.
gi 569009449   497 WVCPRCKSMNFSWRKVCYKCK 517
Cdd:smart00547   3 WECPACTFLNFASRSKCFACG 23
 
Name Accession Description Interval E-value
TEX13 pfam15186
Testis-expressed sequence 13 protein family; The function of this family of proteins has not, ...
 6-150 1.98e-68

Testis-expressed sequence 13 protein family; The function of this family of proteins has not, as yet, been determined. However, members are thought to be encoded for by spermatogonially-expressed, germ-cell-specific genes. This family of proteins is found in eukaryotes. Proteins in this family are typically between 177 and 384 amino acids in length. There are two conserved sequence motifs: FIN and LAL.


Pssm-ID: 464551 [Multi-domain]  Cd Length: 150  Bit Score: 216.76  E-value: 1.98e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569009449    6 GDHSTGFRHSEVIRFINNEILMNGGGPEFYLAFRMRPWNEIEDQLRAILIDPQVPRSLKRACTWSALALGVRIAARQREQ 85
Cdd:pfam15186   2 GDPSSGFRHGEVVAFINEEVLRNGGGPEFYLENRSLSWEEVEDKLRAILEDPEVPREAKEACAWSALALGVRFAARQREL 81

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 569009449   86 QAYMVGLSQDAFGQLPSAPRASVSELWQLRQQ----REEAVTQLISTQAALQQAMRECDLLRRRLHHVE 150
Cdd:pfam15186  82 QARRVQWLQDQAEEHESATWALASELQRLREQqemeRKEAAFQLQLTQAALAQVQKERDLLRWKLLQAE 150
zf-RanBP pfam00641
Zn-finger in Ran binding protein and others;
497-517 2.30e-03

Zn-finger in Ran binding protein and others;


Pssm-ID: 395516 [Multi-domain]  Cd Length: 30  Bit Score: 35.79  E-value: 2.30e-03
                          10        20
                  ....*....|....*....|.
gi 569009449  497 WVCPRCKSMNFSWRKVCYKCK 517
Cdd:pfam00641   5 WDCSKCLVQNFATSTKCVACQ 25
ZnF_RBZ smart00547
Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. ...
 497-517 2.83e-03

Zinc finger domain; Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.


Pssm-ID: 197784 [Multi-domain]  Cd Length: 25  Bit Score: 35.37  E-value: 2.83e-03
                           10        20
                   ....*....|....*....|.
gi 569009449   497 WVCPRCKSMNFSWRKVCYKCK 517
Cdd:smart00547   3 WECPACTFLNFASRSKCFACG 23
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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