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Conserved domains on  [gi|530362648|ref|XP_005270933|]
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cilia- and flagella-associated protein 144 isoform X2 [Homo sapiens]

Protein Classification

FAM183 family protein( domain architecture ID 10632846)

FAM183 family protein similar to Homo sapiens protein FAM183A

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FAM183 pfam14886
FAM183A and FAM183B related; The function of this family of metazoan sequences is not known.
 17-109 6.91e-30

FAM183A and FAM183B related; The function of this family of metazoan sequences is not known.


:

Pssm-ID: 434286  Cd Length: 107  Bit Score: 103.52  E-value: 6.91e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530362648   17 VHTVTRKPM---SWHDNLEEPADARFLNLIHHAAQGPRKKYPETQTENQEVGWDLEPLVSvapssgntrkhssninPERH 93
Cdd:pfam14886  28 VHVLTEKPNasySEHDNEEAEEDLEFLKKIKRAAQTPRQKYSFPQTESQEYGWFSEPLIP----------------PDRS 91

                          90
                  ....*....|....*.
gi 530362648   94 DRRLNHFRVCSDITLY 109
Cdd:pfam14886  92 DNRLNFPRKSCEITKY 107
 
Name Accession Description Interval E-value
FAM183 pfam14886
FAM183A and FAM183B related; The function of this family of metazoan sequences is not known.
 17-109 6.91e-30

FAM183A and FAM183B related; The function of this family of metazoan sequences is not known.


Pssm-ID: 434286  Cd Length: 107  Bit Score: 103.52  E-value: 6.91e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530362648   17 VHTVTRKPM---SWHDNLEEPADARFLNLIHHAAQGPRKKYPETQTENQEVGWDLEPLVSvapssgntrkhssninPERH 93
Cdd:pfam14886  28 VHVLTEKPNasySEHDNEEAEEDLEFLKKIKRAAQTPRQKYSFPQTESQEYGWFSEPLIP----------------PDRS 91

                          90
                  ....*....|....*.
gi 530362648   94 DRRLNHFRVCSDITLY 109
Cdd:pfam14886  92 DNRLNFPRKSCEITKY 107
 
Name Accession Description Interval E-value
FAM183 pfam14886
FAM183A and FAM183B related; The function of this family of metazoan sequences is not known.
 17-109 6.91e-30

FAM183A and FAM183B related; The function of this family of metazoan sequences is not known.


Pssm-ID: 434286  Cd Length: 107  Bit Score: 103.52  E-value: 6.91e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530362648   17 VHTVTRKPM---SWHDNLEEPADARFLNLIHHAAQGPRKKYPETQTENQEVGWDLEPLVSvapssgntrkhssninPERH 93
Cdd:pfam14886  28 VHVLTEKPNasySEHDNEEAEEDLEFLKKIKRAAQTPRQKYSFPQTESQEYGWFSEPLIP----------------PDRS 91

                          90
                  ....*....|....*.
gi 530362648   94 DRRLNHFRVCSDITLY 109
Cdd:pfam14886  92 DNRLNFPRKSCEITKY 107
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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