|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
434-1196 |
1.20e-22 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 105.91 E-value: 1.20e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 434 LKQATDTEKELKK------KKARVA--ALEKQLQEKTSAYSLAALKNTELETQLQEKTSSVQHYQSLLTKKQREYQQSLE 505
Cdd:TIGR02168 188 LDRLEDILNELERqlksleRQAEKAerYKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEE 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 506 KWQQsHSHQFTEQQQRIQMLQLSLEEVQPRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQEK----------QVEV 575
Cdd:TIGR02168 268 KLEE-LRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLdelaeelaelEEKL 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 576 RQNEEFLQSFKEQAARSAAKVCELQSSLSACRKEMNSYLQQIEEMKKnyetELERNKEKVSSLQEKLHSTTLVCQRSSEE 655
Cdd:TIGR02168 347 EELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLEL----QIASLNNEIERLEARLERLEDRRERLQQE 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 656 NLQLQLSLQQQQtmLTESSARVSELEESQSQLHRQVSGLEQQLERARVSL----QEELSKRQEDNQVKEKK--LREINQQ 729
Cdd:TIGR02168 423 IEELLKKLEEAE--LKELQAELEELEEELEELQEELERLEEALEELREELeeaeQALDAAERELAQLQARLdsLERLQEN 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 730 NERLSESVRHLTLEvkkcreelvskeseLERLRKDVGVKTSQISCMEESLQHIKSQLISK-NDIVM-DLEKALNRSEADR 807
Cdd:TIGR02168 501 LEGFSEGVKALLKN--------------QSGLSGILGVLSELISVDEGYEAAIEAALGGRlQAVVVeNLNAAKKAIAFLK 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 808 RSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTqkvsderqASVEKLTVQLRETQRELEERTHEVLDMDNALRER 887
Cdd:TIGR02168 567 QNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVA--------KDLVKFDPKLRKALSYLLGGVLVVDDLDNALELA 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 888 ------------------------QGELQQRAKLLGQlDVAIKEHKQ---ELERKVESLQQSLEARERELRDAQRELTDR 940
Cdd:TIGR02168 639 kklrpgyrivtldgdlvrpggvitGGSAKTNSSILER-RREIEELEEkieELEEKIAELEKALAELRKELEELEEELEQL 717
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 941 NmKESQELFACQQKLQKVLKELEETQGHCEGLSRELDASKLQTKETEAQLCAVEEELTLKEARWLQSEARLQGMVTGLEQ 1020
Cdd:TIGR02168 718 R-KELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKE 796
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1021 ELELEREQHSKELESLQETRGQLLKVseqisstmRSSQEQLTVKLQQSQTQLEEVSVRFDQTKAQLDQTKTELEHAWKRA 1100
Cdd:TIGR02168 797 ELKALREALDELRAELTLLNEEAANL--------RERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELI 868
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1101 THLQSQLDQSQTQHLQSQTQLEQSRTLYEQTRAQN--------------SRLQAQLEHLTAVLNQTRVEAAQLQSQL--- 1163
Cdd:TIGR02168 869 EELESELEALLNERASLEEALALLRSELEELSEELreleskrselrrelEELREKLAQLELRLEGLEVRIDNLQERLsee 948
|
810 820 830
....*....|....*....|....*....|....*....
gi 499039972 1164 ------HASEKSVETSSDSLLIKEsEVARLQARISSLGR 1196
Cdd:TIGR02168 949 ysltleEAEALENKIEDDEEEARR-RLKRLENKIKELGP 986
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
157-967 |
6.64e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 93.58 E-value: 6.64e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 157 EELSTLREELEKKTalgKRAEQQRNQALENAEkLKEAFKDYKATISI--------KLKRVMESENKLKGSLIECDREKEE 228
Cdd:TIGR02168 189 DRLEDILNELERQL---KSLERQAEKAERYKE-LKAELRELELALLVlrleelreELEELQEELKEAEEELEELTAELQE 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 229 LEMKCTELERQKAEHRQTISQLTEEVKQFKAAAARLQAQIEEAGHKASHLERQLMERGAEcrdVASLRRELEDLRAVTHS 308
Cdd:TIGR02168 265 LEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQ---LEELESKLDELAEELAE 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 309 QEQKVAQSQKEAQLSQTELAGLEAILSLLHLREGTLgqicaspcmlppvdytgAAHLMKLKpgEGYQQLTRVLQSKEAER 388
Cdd:TIGR02168 342 LEEKLEELKEELESLEAELEELEAELEELESRLEEL-----------------EEQLETLR--SKVAQLELQIASLNNEI 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 389 LKQSNLIERLQDRLSRAQEEISSLQSSMAQRAshYQSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQEKTSAYsla 468
Cdd:TIGR02168 403 ERLEARLERLEDRRERLQQEIEELLKKLEEAE--LKELQAELEELEEELEELQEELERLEEALEELREELEEAEQAL--- 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 469 alknTELETQLQEKTSSVQHYQSLLTKKQREYQQSLEKWQQshshqfteqqqriqmlQLSLEEVQPRVAEmeqelsslQR 548
Cdd:TIGR02168 478 ----DAAERELAQLQARLDSLERLQENLEGFSEGVKALLKN----------------QSGLSGILGVLSE--------LI 529
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 549 ERDEAQRTAL--LLQNSLDQLTQEKQVEVRQNEEFLqsfkEQAARSAAKVCELQSSLSACRKEMNSYLQQIEEMKKNYET 626
Cdd:TIGR02168 530 SVDEGYEAAIeaALGGRLQAVVVENLNAAKKAIAFL----KQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAK 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 627 ELERNKEKVSSLQEKLHSTTLVCQrSSEENLQLQLSLQQQQTMLTESSARVS--------ELEESQSQLHRQ--VSGLEQ 696
Cdd:TIGR02168 606 DLVKFDPKLRKALSYLLGGVLVVD-DLDNALELAKKLRPGYRIVTLDGDLVRpggvitggSAKTNSSILERRreIEELEE 684
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 697 QLERarvsLQEELSKRQEDNQVKEKKLREINQqnerlsesvrhltlEVKKCREELVSKESELERLRKDVGVKTSQISCME 776
Cdd:TIGR02168 685 KIEE----LEEKIAELEKALAELRKELEELEE--------------ELEQLRKELEELSRQISALRKDLARLEAEVEQLE 746
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 777 ESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASV 856
Cdd:TIGR02168 747 ERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERL 826
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 857 EKLTVQLRETQRELEERthevldmDNALRERQGELQQRAKLLGQLDVAIKEHKQELERKVESLQQSLEARER------EL 930
Cdd:TIGR02168 827 ESLERRIAATERRLEDL-------EEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALlrseleEL 899
|
810 820 830
....*....|....*....|....*....|....*..
gi 499039972 931 RDAQRELTDRNMKESQELFACQQKLQKVLKELEETQG 967
Cdd:TIGR02168 900 SEELRELESKRSELRRELEELREKLAQLELRLEGLEV 936
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
117-987 |
2.01e-17 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 88.59 E-value: 2.01e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 117 IRQLEAELEAQAKELKAAELRAEccqeaaaHSDIVVATLTEELSTLREELEKKtalgkraeqqrnqalENAEKLKEAFKD 196
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIE-------RLDLIIDEKRQQLERLRREREKA---------------ERYQALLKEKRE 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 197 YKATISIKLKRVMESE-NKLKGSLIECDREKEELEMKCTELERQKAEHRQTISQLTEEVKQF-KAAAARLQAQIEEAGHK 274
Cdd:TIGR02169 223 YEGYELLKEKEALERQkEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLgEEEQLRVKEKIGELEAE 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 275 ASHLERQLMERGAECRDVASLRRELEDLRavtHSQEQKVAQSQKEAQLSQTELAGLEAILSLLHLREGTLGQicaspcml 354
Cdd:TIGR02169 303 IASLERSIAEKERELEDAEERLAKLEAEI---DKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRA-------- 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 355 ppvdytgaahlmKLKPGEGYQQLTRVLQSKEAERlkqsnlIERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKL 434
Cdd:TIGR02169 372 ------------ELEEVDKEFAETRDELKDYREK------LEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIE 433
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 435 KQATDTEKELKKKKARVAALEKQLQektsaySLAALKNTElETQLQEKTSSVQHYQSLLTKKQREYQQSLEKWQQSHSHQ 514
Cdd:TIGR02169 434 AKINELEEEKEDKALEIKKQEWKLE------QLAADLSKY-EQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERV 506
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 515 FTEQQQRIqMLQLSLEEVQPRVAEmeqeLSSLQRERDEAQRTALllQNSLDQLTQEKQVEVRQNEEFLQSfkEQAARSA- 593
Cdd:TIGR02169 507 RGGRAVEE-VLKASIQGVHGTVAQ----LGSVGERYATAIEVAA--GNRLNNVVVEDDAVAKEAIELLKR--RKAGRATf 577
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 594 ---AKVCELQSSLSACRKE-MNSYLQQIEEMKKNYE---------TELERNKEKVSSLQEKLHSTTL---VCQRS----- 652
Cdd:TIGR02169 578 lplNKMRDERRDLSILSEDgVIGFAVDLVEFDPKYEpafkyvfgdTLVVEDIEAARRLMGKYRMVTLegeLFEKSgamtg 657
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 653 -SEENLQLQLSLQQQQTMLTESSARVSELEESQSQLHRQVSGLEQQLERARVSLQEELSKRQEdnqvKEKKLREINQQNE 731
Cdd:TIGR02169 658 gSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGE----IEKEIEQLEQEEE 733
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 732 RLSESVRHLTLEVKKCREELVSKESELERLRKDVGVKTSQISCMEESLQHIKSQL------------------ISKND-I 792
Cdd:TIGR02169 734 KLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLshsripeiqaelskleeeVSRIEaR 813
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 793 VMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEE 872
Cdd:TIGR02169 814 LREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDE 893
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 873 RTHEVLDMDNALRERQGELQQRAKLLGQLDVAIKEHKQEL----------------ERKVESLQQSLEARERELRDaqre 936
Cdd:TIGR02169 894 LEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELseiedpkgedeeipeeELSLEDVQAELQRVEEEIRA---- 969
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|.
gi 499039972 937 LTDRNMKESQElfacqqkLQKVLKELEETQGHCEGLSRELDASKLQTKETE 987
Cdd:TIGR02169 970 LEPVNMLAIQE-------YEEVLKRLDELKEKRAKLEEERKAILERIEEYE 1013
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
670-1195 |
3.82e-17 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 87.68 E-value: 3.82e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 670 LTESSARVSELEESQSQLHRQVSGLEQQLERARVSLQEElskrQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKCRE 749
Cdd:COG1196 241 LEELEAELEELEAELEELEAELAELEAELEELRLELEEL----ELELEEAQAEEYELLAELARLEQDIARLEERRRELEE 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 750 ELVSKESELERLRKDVGVKTSQISCMEESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFA 829
Cdd:COG1196 317 RLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAA 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 830 DTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERThevldmdNALRERQGELQQRAKLLGQLDVAIKEHK 909
Cdd:COG1196 397 ELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEE-------EALEEAAEEEAELEEEEEALLELLAELL 469
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 910 QELERKVESLQQsleARERELRDAQRELTDRNMKESQELFACQQKLQKVLKELEETQGHCEGLSRELDASKLQTKETEAQ 989
Cdd:COG1196 470 EEAALLEAALAE---LLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAA 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 990 LCA---VEEELTLKEARWLQSEARLqGMVTGLEQELELEREQHSKELESLQETRGQLLKVSEQI---------------- 1050
Cdd:COG1196 547 ALQnivVEDDEVAAAAIEYLKAAKA-GRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLReadaryyvlgdtllgr 625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1051 ----------SSTMRSSQEQLTVKLQQSQTQLEEVSVRFDQTKAQLDQTKTELEHAWKRATHLQSQLDQSQTQHLQSQTQ 1120
Cdd:COG1196 626 tlvaarleaaLRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEE 705
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 499039972 1121 LEQSRTLYEQTRAQNSRLQAQLEHLTAVLNQTRVEAAQLQSQLHASEKSVETSSDSLLIKESEVARLQARISSLG 1195
Cdd:COG1196 706 ERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEALG 780
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
372-1145 |
5.85e-17 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 87.05 E-value: 5.85e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 372 EGYQQLTRVLQSKEA-ERLKQSNL----IERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATD-TEKELK 445
Cdd:TIGR02169 211 ERYQALLKEKREYEGyELLKEKEAlerqKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDlGEEEQL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 446 KKKARVAALEKQLQEKTSAYSLAALKNTELETQLQEKTSSVQHYQSL---LTKKQREYQQSLEKWQ---QSHSHQFTEQQ 519
Cdd:TIGR02169 291 RVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEieeLEREIEEERKRRDKLTeeyAELKEELEDLR 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 520 QRIQMLQLSLEEVQPRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQEkqvevrqneefLQSFKEQAARSAAKVCEL 599
Cdd:TIGR02169 371 AELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEE-----------LADLNAAIAGIEAKINEL 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 600 QSSLSACRKEMNSY---LQQIEEMKKNYETELERNKEKVSSLQEKLHSttlvcqrSSEENLQLQLSLQQQQTMLTESSAR 676
Cdd:TIGR02169 440 EEEKEDKALEIKKQewkLEQLAADLSKYEQELYDLKEEYDRVEKELSK-------LQRELAEAEAQARASEERVRGGRAV 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 677 VSELEESQSQLHRQVSGLEQQLERARVSLQEELSKRQ-----EDNQVKEKKLREINQQNerlseSVRHLTLEVKKCReel 751
Cdd:TIGR02169 513 EEVLKASIQGVHGTVAQLGSVGERYATAIEVAAGNRLnnvvvEDDAVAKEAIELLKRRK-----AGRATFLPLNKMR--- 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 752 vSKESELERLRKD--VGVKTSQISCmEESLQHIKSQLISKNDIVMDLEKAlNRSEADRRSCSQKVEILEGQLQMVQNEFA 829
Cdd:TIGR02169 585 -DERRDLSILSEDgvIGFAVDLVEF-DPKYEPAFKYVFGDTLVVEDIEAA-RRLMGKYRMVTLEGELFEKSGAMTGGSRA 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 830 DTLTQLQELKDvLQKTQKVSDERQaSVEKLTVQLRETQRELEERTHEVLDMDNALRERQGELQQRAKLLGQLDVAIKEHK 909
Cdd:TIGR02169 662 PRGGILFSRSE-PAELQRLRERLE-GLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERL 739
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 910 QELERKVESLQQSLEARERELRDAQRELTDRnmkesqelfacQQKLQKVLKELEEtqghcegLSRELDASKLQTKETEAQ 989
Cdd:TIGR02169 740 EELEEDLSSLEQEIENVKSELKELEARIEEL-----------EEDLHKLEEALND-------LEARLSHSRIPEIQAELS 801
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 990 lcAVEEELTLKEARWLQSEARLQgmvtgleqELELEREQHSKELESLQEtrgQLLKVSEQISStMRSSQEQLTVKLQQSQ 1069
Cdd:TIGR02169 802 --KLEEEVSRIEARLREIEQKLN--------RLTLEKEYLEKEIQELQE---QRIDLKEQIKS-IEKEIENLNGKKEELE 867
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 499039972 1070 TQLEEvsvrfdqTKAQLDQTKTELEHAWKRATHLQSQLDQSQTQHLQSQTQLEQSRTLYEQTRAQNSRLQAQLEHL 1145
Cdd:TIGR02169 868 EELEE-------LEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEI 936
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
103-879 |
2.06e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 82.03 E-value: 2.06e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 103 RAGVHNNVVVMSEQIRQLE-------AELEAQAKELKAAELRAECCQEAAAHSDIVVATLTEELSTLREELEkkTALGKR 175
Cdd:TIGR02168 311 LANLERQLEELEAQLEELEskldelaEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLE--TLRSKV 388
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 176 AEQQRNQALENAEklkeafkdyKATISIKLKRVMESENKLKGSLIECDREKEELEMKctELERQKAEHRQTISQLTEEVK 255
Cdd:TIGR02168 389 AQLELQIASLNNE---------IERLEARLERLEDRRERLQQEIEELLKKLEEAELK--ELQAELEELEEELEELQEELE 457
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 256 QFKAAAARLQAQIEEAGHKASHLERQLMERGAECRDVASLRRELEDLravthsqeqkvAQSQKEAQLSQTELAGLEAILS 335
Cdd:TIGR02168 458 RLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGF-----------SEGVKALLKNQSGLSGILGVLS 526
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 336 -LLHLREG-------TLGQICASPCMLPPVDYTGA-AHLMKLKPG-----EGYQQLTRVLQSKEAERLKQSNLIERLQDR 401
Cdd:TIGR02168 527 eLISVDEGyeaaieaALGGRLQAVVVENLNAAKKAiAFLKQNELGrvtflPLDSIKGTEIQGNDREILKNIEGFLGVAKD 606
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 402 LSRAQEEISSLQSSMAQrashyqslHTELLDKLKQATDTEKELkKKKARVAALEKQLQEKTSAYSLAALKnteletqlqe 481
Cdd:TIGR02168 607 LVKFDPKLRKALSYLLG--------GVLVVDDLDNALELAKKL-RPGYRIVTLDGDLVRPGGVITGGSAK---------- 667
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 482 KTSSVQhyqslltkkqrEYQQSLEKWQQshshQFTEQQQRIQMLQLSLEEVQPRVAEMEQELSSLQRERDEAQRTALLLQ 561
Cdd:TIGR02168 668 TNSSIL-----------ERRREIEELEE----KIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALR 732
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 562 NSLDQLTQEKQ---VEVRQNEEFLQSFKEQAARSAAKVCELQSSLSACRKEMNSYLQQIEEMKKnyetELERNKEKVSSL 638
Cdd:TIGR02168 733 KDLARLEAEVEqleERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKE----ELKALREALDEL 808
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 639 QEKLHSTTLVCQRSSEENLQLQLSLQQQQTMLTESSARVSELEESQSQLHRQVSGLEQQ---LERARVSLQEELSKRQED 715
Cdd:TIGR02168 809 RAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELieeLESELEALLNERASLEEA 888
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 716 NQVKEKKLREINQQNERLSESVRHLTLEVKKCREELVSKESELERLRKDvgvktsqiscmeesLQHIKSQLISKNDIVMD 795
Cdd:TIGR02168 889 LALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVR--------------IDNLQERLSEEYSLTLE 954
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 796 LEKAL-NRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERT 874
Cdd:TIGR02168 955 EAEALeNKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEIDREARERF 1034
|
....*
gi 499039972 875 HEVLD 879
Cdd:TIGR02168 1035 KDTFD 1039
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
429-1195 |
5.92e-15 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 80.50 E-value: 5.92e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 429 ELLDKLKQATDTEKELKKKKARVAALEKQLQEktsAYSLAALKNTELETqLQEKTSSVQHYQSLLTKKQReyqqsLEKWQ 508
Cdd:TIGR02169 157 KIIDEIAGVAEFDRKKEKALEELEEVEENIER---LDLIIDEKRQQLER-LRREREKAERYQALLKEKRE-----YEGYE 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 509 QSHSHQFTEQQqriqmlqlsLEEVQPRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTqeKQVEVRQNEEFLQsFKEQ 588
Cdd:TIGR02169 228 LLKEKEALERQ---------KEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELN--KKIKDLGEEEQLR-VKEK 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 589 AARSAAKVCELQSSLSACRKEMnsylQQIEEMKKNYETELERNKEKVSSLQEKLHSTTLVCQRSSEENLQLQLSLQQQQT 668
Cdd:TIGR02169 296 IGELEAEIASLERSIAEKEREL----EDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRA 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 669 MLTESSARVSELEESQSQLHRQVSGLEQQLErarvSLQEELSKRQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKCR 748
Cdd:TIGR02169 372 ELEEVDKEFAETRDELKDYREKLEKLKREIN----ELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKA 447
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 749 EELVSKESELERLRKDVGVKTSQISCMEESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEF 828
Cdd:TIGR02169 448 LEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTV 527
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 829 AD----------------------------------------------TLTQLQELKDVLQKTQKVS------------- 849
Cdd:TIGR02169 528 AQlgsvgeryataievaagnrlnnvvveddavakeaiellkrrkagraTFLPLNKMRDERRDLSILSedgvigfavdlve 607
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 850 -DERQASVEK------LTVQLRETQRELEERTHEVlDMDNALRERQGELQ--QRAKLLGQLDvaikehKQELERKVESLQ 920
Cdd:TIGR02169 608 fDPKYEPAFKyvfgdtLVVEDIEAARRLMGKYRMV-TLEGELFEKSGAMTggSRAPRGGILF------SRSEPAELQRLR 680
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 921 QSLEARERELRDAQRELTDRNmkesQELFACQQKLQKVLKELEETQGHCEGLSRELDASKLQTKETEAQLCAVEEELTLK 1000
Cdd:TIGR02169 681 ERLEGLKRELSSLQSELRRIE----NRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENV 756
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1001 EARWLQSEARLQGMVTGLEQELELEREQHSKELES-LQETRGQLLKVSEQISStMRSSQEQLTVKLQQSQTQLEEVSVRF 1079
Cdd:TIGR02169 757 KSELKELEARIEELEEDLHKLEEALNDLEARLSHSrIPEIQAELSKLEEEVSR-IEARLREIEQKLNRLTLEKEYLEKEI 835
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1080 DQTKAQLDQTKTELEHAWKRATHLQSQLDQSQTQHLQSQTQLEQSRTLYEQTRAQNSRLQAQL-------EHLTAVLNQT 1152
Cdd:TIGR02169 836 QELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLrelerkiEELEAQIEKK 915
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*.
gi 499039972 1153 RVEAAQLQSQLHASEKSVETSSDSLLIKESEVA-------------RLQARISSLG 1195
Cdd:TIGR02169 916 RKRLSELKAKLEALEEELSEIEDPKGEDEEIPEeelsledvqaelqRVEEEIRALE 971
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
374-937 |
1.01e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 79.60 E-value: 1.01e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 374 YQQLTRVLQSKEAERLkqSNLIERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAA 453
Cdd:COG1196 215 YRELKEELKELEAELL--LLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYE 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 454 LEKQLQEKTSAYSLAALKNTELETQLQEKTSSVQHYQSLLTKKQREYQQSLEKWQQSHSHQFTEQQQRIQMLQLSLEEVQ 533
Cdd:COG1196 293 LLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEA 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 534 ---PRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQEKQVEVRQNEEfLQSFKEQAARSAAKVCELQSSLSACRKEM 610
Cdd:COG1196 373 elaEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEE-LEELEEALAELEEEEEEEEEALEEAAEEE 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 611 NSYLQQIEEMKKNYETELERNKEKVSSLQEKLHsttlvcQRSSEENLQLQLSLQQQQTMLTESSARVSELEESQSQLHRQ 690
Cdd:COG1196 452 AELEEEEEALLELLAELLEEAALLEAALAELLE------ELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGA 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 691 VSGLEQQLERARVSLQEELSKRQEDNQVKEKK--LREINQQNERLSESVRHLTLEVKKCREELVSKESELERLRKDVGVK 768
Cdd:COG1196 526 VAVLIGVEAAYEAALEAALAAALQNIVVEDDEvaAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVA 605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 769 TSQISCmEESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKV 848
Cdd:COG1196 606 SDLREA-DARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEEL 684
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 849 SDERQASVEKLTVQLRETQRELEERTHEVLDMDNALRERQGELQQRAKLLGQLDVAIKEHKQELERKVESLQQSLEAR-- 926
Cdd:COG1196 685 AERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLee 764
|
570
....*....|..
gi 499039972 927 -ERELRDAQREL 937
Cdd:COG1196 765 lERELERLEREI 776
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
227-822 |
1.74e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 78.83 E-value: 1.74e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 227 EELEMKCTELERQ--KAEHRQTISQLTEEVKQFKAAAAR--LQAQIEEAGHKASHLERQLMERGAEcrdVASLRRELEDL 302
Cdd:COG1196 196 GELERQLEPLERQaeKAERYRELKEELKELEAELLLLKLreLEAELEELEAELEELEAELEELEAE---LAELEAELEEL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 303 RAVTHSQEQKVAQSQKEAQLSQTELAGLEAILSLLHLREgtlgqicaspcmlppvdytgaahlmklkpgegyQQLTRVLQ 382
Cdd:COG1196 273 RLELEELELELEEAQAEEYELLAELARLEQDIARLEERR---------------------------------RELEERLE 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 383 SKEAERLKQSNLIERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQEKT 462
Cdd:COG1196 320 ELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELA 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 463 SAYSLAALKNTELETQLQEKTSSVQHYQSLLTKKQREyQQSLEKWQQSHSHQFTEQQQRIQMLQLSLEEVQPRVAEMEQE 542
Cdd:COG1196 400 AQLEELEEAEEALLERLERLEEELEELEEALAELEEE-EEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAA 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 543 LSSLQRERDEAQRTALLLQNSLDQLTQEKQVEVRQNEEFLQS----------FKEQAARSAAKVCELQSSLSACRKEMNS 612
Cdd:COG1196 479 LAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRglagavavliGVEAAYEAALEAALAAALQNIVVEDDEV 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 613 YLQQIEEMKKNYE---TELERNKEKVSSLQEKLHSTTLVCQ---------RSSEENLQLQLSLQQQQTMLTESSARVSEL 680
Cdd:COG1196 559 AAAAIEYLKAAKAgraTFLPLDKIRARAALAAALARGAIGAavdlvasdlREADARYYVLGDTLLGRTLVAARLEAALRR 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 681 EESQSQLHRQVSGLEQQLERARVSLQEELSKRQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKCREELVSKESELER 760
Cdd:COG1196 639 AVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLE 718
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 499039972 761 LRKDVGVKTSQIscmEESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQ 822
Cdd:COG1196 719 EELEEEALEEQL---EAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIE 777
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
164-943 |
2.25e-14 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 79.03 E-value: 2.25e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 164 EELEKKTALGKRAEQQRNQALENAEKLKEAFKdyKATISIKLKRVMESENKLKgslIECDREKEEleMKCTELERQKAEH 243
Cdd:PTZ00121 1091 EATEEAFGKAEEAKKTETGKAEEARKAEEAKK--KAEDARKAEEARKAEDARK---AEEARKAED--AKRVEIARKAEDA 1163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 244 RQT-ISQLTEEVKQFKAAAARLQAQIEEAGHKASHLERQLMERGAE-CRDVASLRRELEDLRAVTHSQEQKVAQSQKEAQ 321
Cdd:PTZ00121 1164 RKAeEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEeERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAK 1243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 322 LSQTELAGLEailsLLHLREGTLGQICASPCMLPPVDYTGAAHLMKLKPGEGYQQLTRVLQSKEAERLKQSNLIERLQDR 401
Cdd:PTZ00121 1244 KAEEERNNEE----IRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADE 1319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 402 LSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKK-----------KARVAALEKQLQEKTSAYSL--- 467
Cdd:PTZ00121 1320 AKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKaeaaekkkeeaKKKADAAKKKAEEKKKADEAkkk 1399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 468 ---AALKNTELETQLQEKTSSVQHYQSLLTKKQRE--YQQSLEKWQQSHSHQFTEQQQRIQMLQLSLEEvqPRVAEMEQE 542
Cdd:PTZ00121 1400 aeeDKKKADELKKAAAAKKKADEAKKKAEEKKKADeaKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEE--AKKADEAKK 1477
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 543 LSSLQRERDEAQRTALLLQNSLDQL-----TQEKQVEVRQNEEFLQSFKEQAARSAAKVCELQSslsACRKEMNSYLQQI 617
Cdd:PTZ00121 1478 KAEEAKKADEAKKKAEEAKKKADEAkkaaeAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKK---AEEKKKADELKKA 1554
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 618 EEMKKNYETELERNKEKVSSLQEKLHSTTLVCQRSSEENLQLQLSLQQQQTMLTESSARVSELEESQSQLHRQVSGLEQQ 697
Cdd:PTZ00121 1555 EELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKK 1634
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 698 LERARVSLQEE------LSKRQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKCREELVSKESE---LERLRKDVG-- 766
Cdd:PTZ00121 1635 VEQLKKKEAEEkkkaeeLKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEakkAEELKKKEAee 1714
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 767 VKTSQISCMEESLQHIKSQLISKNDiVMDLEKA--LNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKD---- 840
Cdd:PTZ00121 1715 KKKAEELKKAEEENKIKAEEAKKEA-EEDKKKAeeAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDekrr 1793
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 841 --VLQKTQKVSDERQASVE---KLTVQLRETQRELEERTHEVLDMDNALRERQGELQQRAKLL-------GQLDVAIKEH 908
Cdd:PTZ00121 1794 meVDKKIKDIFDNFANIIEggkEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKnnengedGNKEADFNKE 1873
|
810 820 830
....*....|....*....|....*....|....*
gi 499039972 909 KQELERKVESLQQSLEARERELRDAQRELTDRNMK 943
Cdd:PTZ00121 1874 KDLKEDDEEEIEEADEIEKIDKDDIEREIPNNNMA 1908
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
143-966 |
6.30e-14 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 77.49 E-value: 6.30e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 143 EAAAHSDIVVATLTEELSTLREELEKKTALGKRAEQQRNQALENAEKLKEAFKDYKATisiKLKRVMESENKLKGSLIEC 222
Cdd:PTZ00121 1080 DFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAE---DARKAEEARKAEDAKRVEI 1156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 223 DREKEElemkctelerqkaEHRQTISQLTEEVKQFKAAAARLQAQIEEAGHKASHLERQLMERGAE-CRDVASLRRELED 301
Cdd:PTZ00121 1157 ARKAED-------------ARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEeERKAEEARKAEDA 1223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 302 LRAVTHSQEQKVAQSQKEAQLSQTELAGLEailsLLHLREGTLGQICASPCMLPPVDYTGAAHLMKLKPGEGYQQLTRVL 381
Cdd:PTZ00121 1224 KKAEAVKKAEEAKKDAEEAKKAEEERNNEE----IRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAE 1299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 382 QSKEAERLKQSNLIERLQDRLSRAQEEISSLQSSMAQRAShyqslhtellDKLKQATDTEKELKKKKARVAALEKQLQEK 461
Cdd:PTZ00121 1300 EKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAE----------EAKKAAEAAKAEAEAAADEAEAAEEKAEAA 1369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 462 TSAYSLAALKNTELETQLQEKTSSVQhyqslLTKKQREYQQSLEKWQQShshqfTEQQQRIQMLQLSLEEVqpRVAEMEQ 541
Cdd:PTZ00121 1370 EKKKEEAKKKADAAKKKAEEKKKADE-----AKKKAEEDKKKADELKKA-----AAAKKKADEAKKKAEEK--KKADEAK 1437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 542 ELSSLQRERDEAQRTALLLQNSldQLTQEKQVEVRQNEEFlqsfkEQAARSAAKVCELQSSLSACRKEMNSYLQQIEEMK 621
Cdd:PTZ00121 1438 KKAEEAKKADEAKKKAEEAKKA--EEAKKKAEEAKKADEA-----KKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKK 1510
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 622 KNYETELERNKEKVSSLQEKLHSTTLVCQRSSEENLQLQLSLQQQQTMLTESSARVSEL--EESQSQLHRQVSGLEQQLE 699
Cdd:PTZ00121 1511 KADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAkkAEEDKNMALRKAEEAKKAE 1590
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 700 RARVSLQEELSKRQEDNQVKEKKLRE---INQQNERLSESVRHLTLEVKKCREELVSKESELERLRKDVGVKTSQISCME 776
Cdd:PTZ00121 1591 EARIEEVMKLYEEEKKMKAEEAKKAEeakIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKA 1670
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 777 ESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCSQkveilegqlqmVQNEFADTLTQLQELKdvlqktqKVSDERQASV 856
Cdd:PTZ00121 1671 EEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEE-----------LKKKEAEEKKKAEELK-------KAEEENKIKA 1732
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 857 EKLTVQLRETQRELEERTHEVLDMDNALRERQGELQQRAKLLGQLDVAIKEhkqELERKVESLQQSLEARERELRDAQRE 936
Cdd:PTZ00121 1733 EEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEE---ELDEEDEKRRMEVDKKIKDIFDNFAN 1809
|
810 820 830
....*....|....*....|....*....|
gi 499039972 937 LTDRNMKESQELFACQQKLQKVLKELEETQ 966
Cdd:PTZ00121 1810 IIEGGKEGNLVINDSKEMEDSAIKEVADSK 1839
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
113-949 |
2.06e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 75.49 E-value: 2.06e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 113 MSEQIRQLEAELEAQAKEL-KAAELRAECCQEAAAhsdivvatLTEELSTLREELEKKTalgkraEQQRNQALENAEKLK 191
Cdd:TIGR02169 235 LERQKEAIERQLASLEEELeKLTEEISELEKRLEE--------IEQLLEELNKKIKDLG------EEEQLRVKEKIGELE 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 192 EAFKDYKATISIKLKRVMESENKLKGSLIECDREKEELEmkctELERQKAEHRQTISQLTEEVKQFKAAAARLQAQIEEA 271
Cdd:TIGR02169 301 AEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIE----ELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEV 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 272 GHKASHLERQLMERGAECRDvasLRRELEDL-RAVTHSQEQKVAQSQKEAQLSQtELAGLEAILSLLHLREGTLGQicas 350
Cdd:TIGR02169 377 DKEFAETRDELKDYREKLEK---LKREINELkRELDRLQEELQRLSEELADLNA-AIAGIEAKINELEEEKEDKAL---- 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 351 pcmlppvdytgaahlmKLKPGEG-YQQLTRVLQSKEAERLKQSNLIERLQDRLSRAQEEISSL--QSSMAQRASHYQSLH 427
Cdd:TIGR02169 449 ----------------EIKKQEWkLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAeaQARASEERVRGGRAV 512
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 428 TELLDK-LKQATDTEKELKKKKAR-VAALEkqlqektSAYSlAALKNTELETQ---------LQEKTSSVQHYQSL--LT 494
Cdd:TIGR02169 513 EEVLKAsIQGVHGTVAQLGSVGERyATAIE-------VAAG-NRLNNVVVEDDavakeaielLKRRKAGRATFLPLnkMR 584
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 495 KKQREYQQSLEKWQQSHSHQFTEQQQRIQ----------MLQLSLEEVQP-----RVAEMEQELSslqrERDEAQRTALL 559
Cdd:TIGR02169 585 DERRDLSILSEDGVIGFAVDLVEFDPKYEpafkyvfgdtLVVEDIEAARRlmgkyRMVTLEGELF----EKSGAMTGGSR 660
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 560 LQNSLDQLTQEKQVEVRQNEEFLQSFKEQAARSAAKVCELQSSLSACRKEMNSYLQQIEEMKKNYET---ELERNKEKVS 636
Cdd:TIGR02169 661 APRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQleqEEEKLKERLE 740
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 637 SLQEKLHSttlvCQRSSEENlqlqlslqqqQTMLTESSARVSELEESQSQLHRQVSGLEQQLERARVslqeelskrqedn 716
Cdd:TIGR02169 741 ELEEDLSS----LEQEIENV----------KSELKELEARIEELEEDLHKLEEALNDLEARLSHSRI------------- 793
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 717 QVKEKKLREINQQNERLSESVRHLTLEVKKCREELVSKESELERLRKDVGVKTSQISCMEESLQHIKSQLISKNDIVMDL 796
Cdd:TIGR02169 794 PEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEEL 873
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 797 EKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDvLQKTQKVSDERQASVEKltvQLRETQRELEERTHE 876
Cdd:TIGR02169 874 EAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRK-RLSELKAKLEALEEELS---EIEDPKGEDEEIPEE 949
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 499039972 877 VLDMDNALRERQgELQQRAKLLGQLDVAIKEHKQELERKVESLQQSLEARERElRDAQRELTDRNMKESQELF 949
Cdd:TIGR02169 950 ELSLEDVQAELQ-RVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEE-RKAILERIEEYEKKKREVF 1020
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
115-620 |
1.12e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 73.05 E-value: 1.12e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 115 EQIRQLEAELEAQAKELKAAELRAECCQEAAAHSDIVVATLTEELSTLRE----------ELEKKTALGKRAEQQRNQAL 184
Cdd:COG1196 260 AELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEErrreleerleELEEELAELEEELEELEEEL 339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 185 ENAEKLKEAFKDYKATISIKLKRVMESENKLKGSLIECDREKEELEMKCTELERQKAEHRQTISQLTEEVKQFKAAAARL 264
Cdd:COG1196 340 EELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERL 419
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 265 QAQIEEAghkASHLERQLMERGAECRDVASLRRELEDLRAVTHSQEQKVAQSQKEAQLSQTELAGLEAILSLLHLREGTL 344
Cdd:COG1196 420 EEELEEL---EEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLL 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 345 GQICASpcmLPPVDYTGAAHLMKLKPGEGYQQLTRVLQSKEAER-----LKQSNLIERLQDRLSRAQEEISSLQSSMAQR 419
Cdd:COG1196 497 LEAEAD---YEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEaaleaALAAALQNIVVEDDEVAAAAIEYLKAAKAGR 573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 420 ASHYQSLHTELLDKLKQATDTEK----------ELKKKKARVAALEKQLQEKTSAYSLAALKNTELETQLQEKTSSVQHY 489
Cdd:COG1196 574 ATFLPLDKIRARAALAAALARGAigaavdlvasDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEG 653
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 490 QSLLTKKQREYQQSLEKwqqshSHQFTEQQQRIQMLQLSLEEVQPRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQ 569
Cdd:COG1196 654 EGGSAGGSLTGGSRREL-----LAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEE 728
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 499039972 570 EKQVEVRQNEEFLQSFKEQAARSAAKVCELQSSLSACRKEMNSYLQQIEEM 620
Cdd:COG1196 729 QLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
393-987 |
2.31e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 72.02 E-value: 2.31e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 393 NLIERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTEL--LDKLKQA-TDTEKELKKKKARVAALEKQLQEKTSAYSLAA 469
Cdd:PRK03918 193 ELIKEKEKELEEVLREINEISSELPELREELEKLEKEVkeLEELKEEiEELEKELESLEGSKRKLEEKIRELEERIEELK 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 470 LKNTELETQLQEKTS---SVQHYQSL--LTKKQREYQQSLEKWQQSHSHQFTEQQQRIQmlqlSLEEVQPRVAEMEQELS 544
Cdd:PRK03918 273 KEIEELEEKVKELKElkeKAEEYIKLseFYEEYLDELREIEKRLSRLEEEINGIEERIK----ELEEKEERLEELKKKLK 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 545 SLQRERDEAQRTALLLQnsldqltqekqvEVRQNEEFLQSFK-EQAARSAAKVCELQSSLSACRKEMNSYLQQIEEMKKN 623
Cdd:PRK03918 349 ELEKRLEELEERHELYE------------EAKAKKEELERLKkRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGE 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 624 YETELERNKEKVSSLqEKLHSTTLVCQRSSEENLQLQLSLQQQQTmLTESSARVSELEESQSQLHRQVSGLEQQLERarv 703
Cdd:PRK03918 417 LKKEIKELKKAIEEL-KKAKGKCPVCGRELTEEHRKELLEEYTAE-LKRIEKELKEIEEKERKLRKELRELEKVLKK--- 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 704 slQEELSKrqednqvkekkLREINQQNERLSESVRHLTLEvkkcreELVSKESELERLRKDVGVKTSQISCMEESLQHIK 783
Cdd:PRK03918 492 --ESELIK-----------LKELAEQLKELEEKLKKYNLE------ELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLE 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 784 sqliskndivmDLEKalnrseadrrscsqKVEILEGQLQMVQNEFADTLTQLQELKdvlqktqkvsderQASVEkltvQL 863
Cdd:PRK03918 553 -----------ELKK--------------KLAELEKKLDELEEELAELLKELEELG-------------FESVE----EL 590
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 864 RETQRELEERTHEVLDMDNALRERQGELQQRAKLLGQLDVAIKEhKQELERKVESLQQSLEARERELRDAQ-RELTDRNM 942
Cdd:PRK03918 591 EERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEE-LAETEKRLEELRKELEELEKKYSEEEyEELREEYL 669
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
gi 499039972 943 KESQELFACQQKLQKVLKELEETQGHCEGLSRELDASKLQTKETE 987
Cdd:PRK03918 670 ELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELE 714
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
105-642 |
2.57e-12 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 71.87 E-value: 2.57e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 105 GVHNNVVVMSEQIRQLEaELEAQAKELKAAELRAECCQEAAAHSDIVVA-----TLTEELSTLREELEKKTALGKRAEQQ 179
Cdd:COG4913 239 RAHEALEDAREQIELLE-PIRELAERYAAARERLAELEYLRAALRLWFAqrrleLLEAELEELRAELARLEAELERLEAR 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 180 RNQALENAEKLKEAfkdykatisiklkrvmesENKLKGSLIEcdrekeelemkctELERQkaehrqtISQLTEEVKQFKA 259
Cdd:COG4913 318 LDALREELDELEAQ------------------IRGNGGDRLE-------------QLERE-------IERLERELEERER 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 260 AAARLQAQIEEAGHKASHLERQLMERGAECRD-VASLRRELEDLRAVTHSQEQKVAQSQKEAQLSQTELAGLEAILSLLH 338
Cdd:COG4913 360 RRARLEALLAALGLPLPASAEEFAALRAEAAAlLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIP 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 339 LREGTL-GQICASpCMLPPVDYTGAAHLMKLKPGEG-----------------------------------------YQQ 376
Cdd:COG4913 440 ARLLALrDALAEA-LGLDEAELPFVGELIEVRPEEErwrgaiervlggfaltllvppehyaaalrwvnrlhlrgrlvYER 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 377 LTRVLQSKEAERLKQSNLIERLQDRLSRAQEEissLQSSMAQRASHYQSLHTELLDKLKQA-TDT----------EKELK 445
Cdd:COG4913 519 VRTGLPDPERPRLDPDSLAGKLDFKPHPFRAW---LEAELGRRFDYVCVDSPEELRRHPRAiTRAgqvkgngtrhEKDDR 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 446 KK-----------KARVAALEKQLQEKTSAYSLAALKNTELETQLQEKTSSVQHYQSLltkkqREYQQSLEKWQQSHsHQ 514
Cdd:COG4913 596 RRirsryvlgfdnRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRL-----AEYSWDEIDVASAE-RE 669
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 515 FTEQQQRIQMLQLS---LEEVQPRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQEKQvEVRQNEEFLQSFKEQAAR 591
Cdd:COG4913 670 IAELEAELERLDASsddLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELD-ELQDRLEAAEDLARLELR 748
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 499039972 592 SAAKvcELQSSLSACRKEmnsylqqiEEMKKNYETELERNKEKVSSLQEKL 642
Cdd:COG4913 749 ALLE--ERFAAALGDAVE--------RELRENLEERIDALRARLNRAEEEL 789
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
695-1063 |
3.34e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 71.63 E-value: 3.34e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 695 EQQLERARVSLQ------EELSKRQEDNQ---VKEKKLREINQQNERLSESVrhLTLEVKKCREELVSKESELERLRKDV 765
Cdd:TIGR02168 178 ERKLERTRENLDrledilNELERQLKSLErqaEKAERYKELKAELRELELAL--LVLRLEELREELEELQEELKEAEEEL 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 766 GVKTSQISCMEESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKT 845
Cdd:TIGR02168 256 EELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDEL 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 846 QKVSDERQASVEKLTVQLRETQRELEERTHEVLDMDNALRERQGELQQRAKLLGQLDVAIKEHK---QELERKVESLQQS 922
Cdd:TIGR02168 336 AEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNneiERLEARLERLEDR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 923 LEARERELRDAQRELTDRNMKESQELFAcqqKLQKVLKELEEtqghceglsrELDASKLQTKETEAQLCAVEEELTLKEA 1002
Cdd:TIGR02168 416 RERLQQEIEELLKKLEEAELKELQAELE---ELEEELEELQE----------ELERLEEALEELREELEEAEQALDAAER 482
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 499039972 1003 RWLQSEARLQGMVTGLEqelelereqhskELESLQETRGQLLKVSEQISSTMRSSQEQLTV 1063
Cdd:TIGR02168 483 ELAQLQARLDSLERLQE------------NLEGFSEGVKALLKNQSGLSGILGVLSELISV 531
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
116-700 |
5.35e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 70.74 E-value: 5.35e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 116 QIRQLEAELEAQAKELKAAELRAECCQEAAAHSDIVVATLTEELSTLREELEKKTAlgkrAEQQRNQALENAEKLKEAFK 195
Cdd:COG1196 233 KLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQA----EEYELLAELARLEQDIARLE 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 196 DYKATISIKLKRVMESENKLKGSLIECDREKEELEMKCTELERQKAEHRQTISQLTEEVKQFKAAAARLQAQIEEAGHKA 275
Cdd:COG1196 309 ERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEEL 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 276 SHLERQLMERGAECRDVASLRRELEDLRAvtHSQEQKVAQSQKEAQLSQTELAGLEAILSLLHLREGTLGQIcaspcmlp 355
Cdd:COG1196 389 LEALRAAAELAAQLEELEEAEEALLERLE--RLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEE-------- 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 356 pvdytgaahlmklkpgegyQQLTRVLQSKEAERLKQSNLIERLQDRLSRAQEEISSLQsSMAQRASHYQSLHTELLDKLK 435
Cdd:COG1196 459 -------------------EALLELLAELLEEAALLEAALAELLEELAEAAARLLLLL-EAEADYEGFLEGVKAALLLAG 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 436 Q-------ATDTEKELKKKKARVAALEKQLQEKTSAYSLAALKNTELetqLQEKTSSVQHYQSLLTKKQREYQQSLEKWQ 508
Cdd:COG1196 519 LrglagavAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEY---LKAAKAGRATFLPLDKIRARAALAAALARG 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 509 QSHshqftEQQQRIQMLQLSLEEVQPRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQEKQVEVRQNEEFLQSFKEQ 588
Cdd:COG1196 596 AIG-----AAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRREL 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 589 AARSAAKVCELQSSLSACRKEMNSYLQQIEEMkknyETELERNKEKVSSLQEKLHSTTLVCQRSSEENLQLQLSLQQQQT 668
Cdd:COG1196 671 LAALLEAEAELEELAERLAEEELELEEALLAE----EEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEE 746
|
570 580 590
....*....|....*....|....*....|..
gi 499039972 669 MLTESSARVSELEESQSQLHRQVSGLEQQLER 700
Cdd:COG1196 747 LLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
155-1046 |
7.71e-12 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 70.39 E-value: 7.71e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 155 LTEELSTLREELEKKT---ALGKRAEQQRNQALENAEKLKEAFKDYKATISIKLKRVMESENKLKGSLIECDREKEELEM 231
Cdd:pfam02463 171 KKEALKKLIEETENLAeliIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQ 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 232 KCTELERQKAEHRQTISQltEEVKQFKAAAARLQAQIEEAGHKASHLERQLMERGAECRDVASLRRELEDLravthsqEQ 311
Cdd:pfam02463 251 EEIESSKQEIEKEEEKLA--QVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKES-------EK 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 312 KVAQSQKEAQLSQTELAGLEAILSLLHLREGTLGQICAspcmlppvdytgaahlmklkpgEGYQQLTRVLQSKEAERLKQ 391
Cdd:pfam02463 322 EKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEE----------------------ELEKLQEKLEQLEEELLAKK 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 392 SNLIERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQEKTSAYSLAALK 471
Cdd:pfam02463 380 KLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELK 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 472 NTELETQLQEKTSSVQHYQSLLTKKQREyQQSLEKWQQSHSHQFTEQQQRIQMLQLSLEEVQPRVAEMEQELSSLQRERD 551
Cdd:pfam02463 460 LLKDELELKKSEDLLKETQLVKLQEQLE-LLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAV 538
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 552 EAQRTALLLQNSLDQLTQEKQVEVRQNEE--FLQSFKEQAARSAAKVCELQSSLSACRKEMNSYLQQIEEMKKNYETELE 629
Cdd:pfam02463 539 ENYKVAISTAVIVEVSATADEVEERQKLVraLTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADED 618
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 630 RNKEKVSSLQEKLHSTTlvcqrSSEENLQLQLSLQQQQTMLTESSARVSELEESQSQLhRQVSGLEQQLERARVSLQEEL 709
Cdd:pfam02463 619 DKRAKVVEGILKDTELT-----KLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSEL-TKELLEIQELQEKAESELAKE 692
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 710 SKRQEDNQVKEKKLREINQQnERLSESVRHLTLEVKKCREELVSKESELERLRKDVGVKTSQISCMEESLQHIKSQLISK 789
Cdd:pfam02463 693 EILRRQLEIKKKEQREKEEL-KKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSL 771
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 790 NDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRE 869
Cdd:pfam02463 772 KEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKL 851
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 870 LEERTHEVLDMDNALRERQGELQQRAKLLGQLDVAIKEHKQELERKVESLQQSLEARERELRDAQRELTDRNMKEsqelf 949
Cdd:pfam02463 852 AEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEE----- 926
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 950 acQQKLQKVLKELEETQGHCEGLSRELDASKLQTKETEAQLCAVEEELTLKEARWLQSEARLQGMVTGLEQELELEREQH 1029
Cdd:pfam02463 927 --AEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEK 1004
|
890
....*....|....*..
gi 499039972 1030 SKELESLQETRGQLLKV 1046
Cdd:pfam02463 1005 KKLIRAIIEETCQRLKE 1021
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
99-1008 |
1.03e-11 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 69.82 E-value: 1.03e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 99 LRGPRAGVHNNVVVMSEQIRQLEAELEAQAKELKAAELRAECCQEAAAHSDIVVATLTEELSTLREELEKKTALGKRAEQ 178
Cdd:pfam01576 213 LEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEK 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 179 QRNQALENAEKLKEAFKDYKATISIK-------------LKRVMESENKLKGSLIECDREK-----EELEMKCTELERQK 240
Cdd:pfam01576 293 QRRDLGEELEALKTELEDTLDTTAAQqelrskreqevteLKKALEEETRSHEAQLQEMRQKhtqalEELTEQLEQAKRNK 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 241 AEHRQTISQLTEEVKQFKAAAARLQAQIEEAGHKASHLERQLMERGAECRDVASLRRELEDlravthsqeqkvaqsqkEA 320
Cdd:pfam01576 373 ANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAE-----------------KL 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 321 QLSQTELAGLEAILSLLHLREGTLGQICASpcmlppvdytgaahlmklkPGEGYQQLTRVLQSKEAERLKQSNLIERLQD 400
Cdd:pfam01576 436 SKLQSELESVSSLLNEAEGKNIKLSKDVSS-------------------LESQLQDTQELLQEETRQKLNLSTRLRQLED 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 401 RLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQ------ATDTEKELKKKKAR-VAALEKQLQEKTSAYSLAALKNT 473
Cdd:pfam01576 497 ERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKleedagTLEALEEGKKRLQReLEALTQQLEEKAAAYDKLEKTKN 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 474 ELETQLQEKTSSVQHYQSL---LTKKQREYQQSLEKwQQSHSHQFTEQQQRIQMlqlSLEEVQPRVAEMEQELSSLQRER 550
Cdd:pfam01576 577 RLQQELDDLLVDLDHQRQLvsnLEKKQKKFDQMLAE-EKAISARYAEERDRAEA---EAREKETRALSLARALEEALEAK 652
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 551 DEAQRTALLLQNSLDQLTQEKQ---VEVRQNEEFLQSFKEQAARSAAKVCELQSSLSACRKEMNSYLQQIEEMKKNYETE 627
Cdd:pfam01576 653 EELERTNKQLRAEMEDLVSSKDdvgKNVHELERSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNMQALKAQFERD 732
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 628 L----ERNKEKVSSLQEKLHsttlvcqrsseenlqlqlslqQQQTMLTESSARVSELEESQSQLHRQVSGLEQQLERArv 703
Cdd:pfam01576 733 LqardEQGEEKRRQLVKQVR---------------------ELEAELEDERKQRAQAVAAKKKLELDLKELEAQIDAA-- 789
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 704 slqeelskrqedNQVKEKKLREINQQNERLSESVRHLTlEVKKCREELVSKESELERLRKDVGVKTSQISCMEESLQHIK 783
Cdd:pfam01576 790 ------------NKGREEAVKQLKKLQAQMKDLQRELE-EARASRDEILAQSKESEKKLKNLEAELLQLQEDLAASERAR 856
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 784 SQLISKNDivmDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQA--SVEKLTV 861
Cdd:pfam01576 857 RQAQQERD---ELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTelAAERSTS 933
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 862 QLRETQRELEERTHEvldmdnALRERQGELQQRAKLLGQLDVAikehkqELERKVESLQQSLEARERElrdaqRELTDRN 941
Cdd:pfam01576 934 QKSESARQQLERQNK------ELKAKLQEMEGTVKSKFKSSIA------ALEAKIAQLEEQLEQESRE-----RQAANKL 996
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 499039972 942 MKESqelfacQQKLQKVLKELEETQGHCEGLSRELDASKLQTKETEAQLCAVEEELTLKEA--RWLQSE 1008
Cdd:pfam01576 997 VRRT------EKKLKEVLLQVEDERRHADQYKDQAEKGNSRMKQLKRQLEEAEEEASRANAarRKLQRE 1059
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
390-963 |
1.28e-11 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 69.28 E-value: 1.28e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 390 KQSNLIERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQEKTSAYSLAA 469
Cdd:TIGR04523 93 KNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELE 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 470 LKNTELETQLQEKTSSVQHYQSLLTKKQREYQ--QSLEKWQQSHSHQFTEQQQRIQMLQLSLEEVQPRVAEMEQELSSLQ 547
Cdd:TIGR04523 173 NELNLLEKEKLNIQKNIDKIKNKLLKLELLLSnlKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQ 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 548 rerDEAQRTALLLQNSLDQLtQEKQVEVRQNEEFLQSFKEQAARSAAKVCELQSSLSA-CRKEMNSYLQQIEEMKKNYET 626
Cdd:TIGR04523 253 ---TQLNQLKDEQNKIKKQL-SEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQdWNKELKSELKNQEKKLEEIQN 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 627 ELERNKEKVSSLQEKLHSTTLVCQRSSEENLQLQLSlqqqqtmLTESSARVSELEESQSQLHRQVSGLEQQLErarvSLQ 706
Cdd:TIGR04523 329 QISQNNKIISQLNEQISQLKKELTNSESENSEKQRE-------LEEKQNEIEKLKKENQSYKQEIKNLESQIN----DLE 397
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 707 EELSKRQEDNQVKEKKLREINQQNERLSEsvrhltlEVKKCREELVSKESELERLRKDVGVKTSQISCMEESLQHIKSQL 786
Cdd:TIGR04523 398 SKIQNQEKLNQQKDEQIKKLQQEKELLEK-------EIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQL 470
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 787 ----ISKNDIVMDLE---KALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQEL-KDVLQKTQKVS--------D 850
Cdd:TIGR04523 471 kvlsRSINKIKQNLEqkqKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLeSEKKEKESKISdledelnkD 550
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 851 ERQASVEKLTVQLRETQRELEERTHEvldmDNALRERQGELQQRAKLLgqldvaiKEHKQELERKVESLQQSLEAREREL 930
Cdd:TIGR04523 551 DFELKKENLEKEIDEKNKEIEELKQT----QKSLKKKQEEKQELIDQK-------EKEKKDLIKEIEEKEKKISSLEKEL 619
|
570 580 590
....*....|....*....|....*....|...
gi 499039972 931 RDAQREltdrNMKESQELFACQQKLQKVLKELE 963
Cdd:TIGR04523 620 EKAKKE----NEKLSSIIKNIKSKKNKLKQEVK 648
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
679-1171 |
5.36e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 67.40 E-value: 5.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 679 ELEESQSQLHRQVSGLE-------------QQLERARVSLQEELSKRQE-DNQVKEKK------LREINQQNERLS---- 734
Cdd:PRK03918 142 ESDESREKVVRQILGLDdyenayknlgeviKEIKRRIERLEKFIKRTENiEELIKEKEkeleevLREINEISSELPelre 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 735 --ESVRHLTLEVKKCREELVSKESELERLRKDVGVKTSQISCMEESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCSQ 812
Cdd:PRK03918 222 elEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEF 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 813 KVEILEgqlqmVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELE--ERTHEVLDMDNALRERQGE 890
Cdd:PRK03918 302 YEEYLD-----ELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEelEERHELYEEAKAKKEELER 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 891 LQQRAKLLGQLDVA-----IKEHKQELERKVESLQQ---SLEARERELRDA--------------QRELTD--------- 939
Cdd:PRK03918 377 LKKRLTGLTPEKLEkeleeLEKAKEEIEEEISKITArigELKKEIKELKKAieelkkakgkcpvcGRELTEehrkellee 456
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 940 ------RNMKESQELFACQQKLQKVLKELEETQGHCEGLSRELDASKlQTKETEAQLCAV---EEELTLKEARWLQSEAR 1010
Cdd:PRK03918 457 ytaelkRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAE-QLKELEEKLKKYnleELEKKAEEYEKLKEKLI 535
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1011 -LQGMVTGLEQELELEREQHSK------ELESLQETRGQLLKvseQISSTMRSSQEQLTVKLQQ-------------SQT 1070
Cdd:PRK03918 536 kLKGEIKSLKKELEKLEELKKKlaelekKLDELEEELAELLK---ELEELGFESVEELEERLKElepfyneylelkdAEK 612
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1071 QLEEVSVRFDQTKAQLDQTKTELEHAWKRATHLQSQLDQSQTQHlqSQTQLEQSRTLYEQTRAQNSRLQAQLEHLTAVLN 1150
Cdd:PRK03918 613 ELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKY--SEEEYEELREEYLELSRELAGLRAELEELEKRRE 690
|
570 580
....*....|....*....|.
gi 499039972 1151 QTRVEAAQLQSQLHASEKSVE 1171
Cdd:PRK03918 691 EIKKTLEKLKEELEEREKAKK 711
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
115-869 |
8.73e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 67.02 E-value: 8.73e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 115 EQIRQLEAELEAQAKELKAAELRAECCQEAAAHSDIvvATLTEELSTLREELEKKTALGKRAEQQRNQAlenAEKLKEAF 194
Cdd:TIGR02169 211 ERYQALLKEKREYEGYELLKEKEALERQKEAIERQL--ASLEEELEKLTEEISELEKRLEEIEQLLEEL---NKKIKDLG 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 195 KDYKATISIKLKRVMESENKLKGSLIECDREKEELEMKCTELERQKAEHRQTISQLTEEVKQFKAAAARLQAQIEEAGHK 274
Cdd:TIGR02169 286 EEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEE 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 275 ASHLERQLME---RGAECRD-VASLRRELEDLRAVTHSQEQKVAQSQKEAQLSQTELAGLEAILsllhlrEGTLGQICAS 350
Cdd:TIGR02169 366 LEDLRAELEEvdkEFAETRDeLKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAI------AGIEAKINEL 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 351 PCMLPPVDYTGAAHLMKLKpgegyqQLTRVLQSKEAERLKQSNLIERLQDRLSRAQEEISSL--QSSMAQRASHYQSLHT 428
Cdd:TIGR02169 440 EEEKEDKALEIKKQEWKLE------QLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAeaQARASEERVRGGRAVE 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 429 ELLDK-LKQATDTEKELKKKKAR-VAALE----KQLQEKTSAYSLAALKNTELETQLQ---------EKTSSVQHYQSLL 493
Cdd:TIGR02169 514 EVLKAsIQGVHGTVAQLGSVGERyATAIEvaagNRLNNVVVEDDAVAKEAIELLKRRKagratflplNKMRDERRDLSIL 593
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 494 TKK------------QREYQ-------------QSLE-----------------------------KWQQSHSHQFTEQQ 519
Cdd:TIGR02169 594 SEDgvigfavdlvefDPKYEpafkyvfgdtlvvEDIEaarrlmgkyrmvtlegelfeksgamtggsRAPRGGILFSRSEP 673
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 520 QRIQMLQLSLEEVQPRVAEMEQELSSLQRERDEAQrtalllqnsldQLTQEKQVEVRQNEEFLQSFKEQAARSAAKVCEL 599
Cdd:TIGR02169 674 AELQRLRERLEGLKRELSSLQSELRRIENRLDELS-----------QELSDASRKIGEIEKEIEQLEQEEEKLKERLEEL 742
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 600 QSSLSACRKEmnsyLQQIEEMKKNYETELERNKEKVSSLQEKLHSttLVCQRSSEENLQLQLSLQQQQTMLTESSARVSE 679
Cdd:TIGR02169 743 EEDLSSLEQE----IENVKSELKELEARIEELEEDLHKLEEALND--LEARLSHSRIPEIQAELSKLEEEVSRIEARLRE 816
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 680 LEESQSQLHRQVSGLE---QQLERARVSLQEELSKRQEDNQVKEKKLREINQQNERLSESVRHLTLE---VKKCREELVS 753
Cdd:TIGR02169 817 IEQKLNRLTLEKEYLEkeiQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRlgdLKKERDELEA 896
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 754 K-----------ESELERLRKDVGVKTSQISCMEESLQHI---KSQLISKNDIVMDLEKAlnrsEADRRSCSQKVEILEG 819
Cdd:TIGR02169 897 QlrelerkieelEAQIEKKRKRLSELKAKLEALEEELSEIedpKGEDEEIPEEELSLEDV----QAELQRVEEEIRALEP 972
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|
gi 499039972 820 QLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRE 869
Cdd:TIGR02169 973 VNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREVFME 1022
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
530-1074 |
1.23e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 66.24 E-value: 1.23e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 530 EEVQPRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQEKQvEVRQNEEFLQSFKEQAARSAAKVCELQSSLSACRKE 609
Cdd:PRK03918 189 ENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVK-ELEELKEEIEELEKELESLEGSKRKLEEKIRELEER 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 610 MNSYLQQIEEMKKNYE--TELERNKEKVSSLQEKLHSTTLVCQRSSEENLQLQLSLQQQQTMLTESS---ARVSELEESQ 684
Cdd:PRK03918 268 IEELKKEIEELEEKVKelKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEekeERLEELKKKL 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 685 SQLHRQVSGLE---QQLERARVSLQ--EELSKRQEDNQVK--EKKLREINQQNERLSESVRHLTLEVKKCREELVSKESE 757
Cdd:PRK03918 348 KELEKRLEELEerhELYEEAKAKKEelERLKKRLTGLTPEklEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKA 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 758 LERLRKDVGVKTSqisCMEESLQHIKSQLISK-----NDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEfaDTL 832
Cdd:PRK03918 428 IEELKKAKGKCPV---CGRELTEEHRKELLEEytaelKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLK--ELA 502
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 833 TQLQELKDVLQKTQKVSDERQA----SVEKLTVQLRETQRELEERTHEVLDMDNALRERQGELQ----QRAKLLGQLDVA 904
Cdd:PRK03918 503 EQLKELEEKLKKYNLEELEKKAeeyeKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDeleeELAELLKELEEL 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 905 IKEHKQELERKVESLQqSLEARERELRDAQRELTDrnmkESQELFACQQKLQKVLKELEETQGHCEGLSRELDAskLQTK 984
Cdd:PRK03918 583 GFESVEELEERLKELE-PFYNEYLELKDAEKELER----EEKELKKLEEELDKAFEELAETEKRLEELRKELEE--LEKK 655
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 985 ETEAQLCAVEEELTLKEARWLQSEARLQGMvtgleqelELEREQHSKELESLQETRGQLLKVSEQISS--TMRSSQEQLT 1062
Cdd:PRK03918 656 YSEEEYEELREEYLELSRELAGLRAELEEL--------EKRREEIKKTLEKLKEELEEREKAKKELEKleKALERVEELR 727
|
570
....*....|..
gi 499039972 1063 VKLQQSQTQLEE 1074
Cdd:PRK03918 728 EKVKKYKALLKE 739
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
114-552 |
4.18e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.57 E-value: 4.18e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 114 SEQIRQLEAELEAQAKELKAAELRAECCQEAAAHSDIVVATLTEELSTLREELEKKtalgKRAEQQRNQALENAEKLKEA 193
Cdd:COG1196 315 EERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEA----EAELAEAEEELEELAEELLE 390
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 194 FKDYKATISIKLKRVMESENKLKGSLIECDREKEELEMKCTELERQKAEHRQTISQLTEEVKQFKAAAARLQAQIEEAGH 273
Cdd:COG1196 391 ALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLE 470
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 274 KASHLERQLMERGAECRDVASLRRELEDLRAVTHSQEQKVAQSQKEAQLS------------------------------ 323
Cdd:COG1196 471 EAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRglagavavligveaayeaaleaalaaalqn 550
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 324 ---QTELAGLEAILSLLHLREGTLGQICASPCMLPPVDYTGAAHLMKLKPGEGYQQLTRVLQSKEAERLKQSNLIERLQD 400
Cdd:COG1196 551 ivvEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAA 630
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 401 RLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQEKTSAYSLAALKNTELETQLQ 480
Cdd:COG1196 631 RLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELA 710
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 499039972 481 EKtssVQHYQSLLTKKQREYQQSLEKWQQSHSHQFTEQQQRIQMLQLSLEEVqPRVAEMEQELSSLQRERDE 552
Cdd:COG1196 711 EA---EEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEP-PDLEELERELERLEREIEA 778
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
825-1171 |
6.96e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 63.92 E-value: 6.96e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 825 QNEFADTLTQLQELKDVLQ--KTQKVSDERQAsveKLTVQLRETQRELEERTHEVLDMDnaLRERQGELQQrakLLGQLD 902
Cdd:TIGR02168 178 ERKLERTRENLDRLEDILNelERQLKSLERQA---EKAERYKELKAELRELELALLVLR--LEELREELEE---LQEELK 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 903 VAIKEHKqELERKVESLQQSLEarerELRDAQRELTDRNMKESQELFACQQKLQKVLKELEETQGHCEGLSRELDASKLQ 982
Cdd:TIGR02168 250 EAEEELE-ELTAELQELEEKLE----ELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQ 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 983 TKETEAQLCAVEEELTLKEARWLQSEARLQGMVTGLEQELELEREQHSKELESLQETRGQLLKVSEqisstMRSSQEQLT 1062
Cdd:TIGR02168 325 LEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQ-----LELQIASLN 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1063 VKLQQSQTQLEEVSVRFDQTKAQLDQTKTELEHAWKRAthLQSQLDqsqtqhlQSQTQLEQSRTLYEQTRAQNSRLQAQL 1142
Cdd:TIGR02168 400 NEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKE--LQAELE-------ELEEELEELQEELERLEEALEELREEL 470
|
330 340
....*....|....*....|....*....
gi 499039972 1143 EHLTAVLNQTRVEAAQLQSQLHASEKSVE 1171
Cdd:TIGR02168 471 EEAEQALDAAERELAQLQARLDSLERLQE 499
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
540-987 |
1.16e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 63.12 E-value: 1.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 540 EQELSSLQRERDEAQRTALLLQNSLDQLTQEKQvevrQNEEFLQSFKEQAARSAAKVCELQSsLSACRKEMNSYLQQIEE 619
Cdd:TIGR04523 151 EKELEKLNNKYNDLKKQKEELENELNLLEKEKL----NIQKNIDKIKNKLLKLELLLSNLKK-KIQKNKSLESQISELKK 225
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 620 MKKNYETELERNKEKVSSLQEKLHSTTLVCQRSSEENLQLQLSLQQQQTMLTESSARVSELEESQSQLHRQVSGLEQQLE 699
Cdd:TIGR04523 226 QNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKE 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 700 RARVS-LQEELSKRQEDNQVKEKKLR-------EINQQNERLSESVRHLTLEVKKCREELVSKESELERLRKDVGVKTSQ 771
Cdd:TIGR04523 306 QDWNKeLKSELKNQEKKLEEIQNQISqnnkiisQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQE 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 772 ISCMEESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDE 851
Cdd:TIGR04523 386 IKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRES 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 852 RQASVEKLTVQLRETQRELEERTHEV---LDMDNALRERQGELQQRAKLLGQLDVAIKEHKQELERKVESLQQSLEARER 928
Cdd:TIGR04523 466 LETQLKVLSRSINKIKQNLEQKQKELkskEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLED 545
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 499039972 929 ELRDAQRELTDRNMKESqelfacQQKLQKVLKELEETQGHCEGLSRELDaSKLQTKETE 987
Cdd:TIGR04523 546 ELNKDDFELKKENLEKE------IDEKNKEIEELKQTQKSLKKKQEEKQ-ELIDQKEKE 597
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
429-1191 |
3.04e-09 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 61.99 E-value: 3.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 429 ELLDKLKQATDTEKELKKKKARVAALEKQLQEKTSAYSLAAlkNTELETQLQEKTSSVQHYQSLLTKKQREYQQsLEKWQ 508
Cdd:TIGR00606 259 HNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQGT--DEQLNDLYHNHQRTVREKERELVDCQRELEK-LNKER 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 509 QSHSHQFTEQQQRIQMLQLSLEEVQPRVAEMEQELSSLQrerdeaqrtallLQNSLDQLTQEKQVEvRQNEEFLQSFKEQ 588
Cdd:TIGR00606 336 RLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLA------------TRLELDGFERGPFSE-RQIKNFHTLVIER 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 589 AARSAAKVCELQSSLSACRKEMNSYLQQIEEMKKNYETELERNKEKVSSLQEKLHSTTLVCQRsseenlqlqlslqqqqt 668
Cdd:TIGR00606 403 QEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQ----------------- 465
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 669 mLTESSARVSELEESQSQLHRQVSGLEQQ-LERARVSLQEELSKRQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKc 747
Cdd:TIGR00606 466 -LEGSSDRILELDQELRKAERELSKAEKNsLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKD- 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 748 reelvsKESELERLRKDVGVKTSQISCMEESLQHiKSQLiskNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNE 827
Cdd:TIGR00606 544 ------KMDKDEQIRKIKSRHSDELTSLLGYFPN-KKQL---EDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNE 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 828 FADTLTQLQELKDVLQKTQKVSDErQASVEKLTVQLRETQRELEERTHEVLDMDNALRERQGELQQRAKLLG---QLDVA 904
Cdd:TIGR00606 614 LESKEEQLSSYEDKLFDVCGSQDE-ESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQrvfQTEAE 692
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 905 IKEHKQELERKVESLQQSLEARERELRDAQRELTDRNMKESQElfacQQKLQKVLKELEETQGHCEGLSRELDASKLQTK 984
Cdd:TIGR00606 693 LQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGR----QSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIE 768
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 985 ETEAQLCAVEEELtlKEARWLQSEARLqgmvtgleqelelereqhskeLESLQETRGQLLKVSEQISSTMRSSQEQLTVk 1064
Cdd:TIGR00606 769 EQETLLGTIMPEE--ESAKVCLTDVTI---------------------MERFQMELKDVERKIAQQAAKLQGSDLDRTV- 824
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1065 lQQSQTQLEEVSVRFDQTKAQLDQTKTELEHAWKRATHLQSQLDQSQTQHLQSQTQLEQSRTLYEQTRAQNSRLQAQLEH 1144
Cdd:TIGR00606 825 -QQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIRE 903
|
730 740 750 760
....*....|....*....|....*....|....*....|....*..
gi 499039972 1145 LTAVLNQTRVEAAQLQSQLHASEKSVETSSDSLLIKESEVARLQARI 1191
Cdd:TIGR00606 904 IKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKV 950
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
700-1012 |
3.40e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 61.62 E-value: 3.40e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 700 RARVSLQEELSKRQEDNQVKEKKLREI-----------------NQQNERLS----ESVRHLTLEVKKCREELVSKESEL 758
Cdd:TIGR02169 153 VERRKIIDEIAGVAEFDRKKEKALEELeeveenierldliidekRQQLERLRrereKAERYQALLKEKREYEGYELLKEK 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 759 ERLRKDVGVKTSQISCMEESLQHIKSQLISKNDIVMDLEKALN--------RSEADRRSCSQKVEILEGQLQMVQNEFAD 830
Cdd:TIGR02169 233 EALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEelnkkikdLGEEEQLRVKEKIGELEAEIASLERSIAE 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 831 TLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHEVLDMDNALRERQGELQQRAKLLGQLDVAIKEHKQ 910
Cdd:TIGR02169 313 KERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYRE 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 911 ELE---RKVESLQQSLEARERELRDAQRELTDRNMKES---QELFACQQKLQKVLKELEETQGHCEGLSRELDASKLQTK 984
Cdd:TIGR02169 393 KLEklkREINELKRELDRLQEELQRLSEELADLNAAIAgieAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELY 472
|
330 340
....*....|....*....|....*...
gi 499039972 985 ETEAQLCAVEEELTLKEARWLQSEARLQ 1012
Cdd:TIGR02169 473 DLKEEYDRVEKELSKLQRELAEAEAQAR 500
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
383-1014 |
4.56e-09 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 61.22 E-value: 4.56e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 383 SKEAERLKQSNliERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTEL-LDKLKQATDTEKELK----------KKKARV 451
Cdd:TIGR00606 332 NKERRLLNQEK--TELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLeLDGFERGPFSERQIKnfhtlvierqEDEAKT 409
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 452 AAleKQLQEKTSAYSLAALKNTELETQLQEKTSSVQHYQSLLTKKQREYQQSLEKWQQSHSHQ----FTEQQQRIQMLQL 527
Cdd:TIGR00606 410 AA--QLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSdrilELDQELRKAEREL 487
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 528 SLEEVQPRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQEKqvEVRQNEEFLQSFKEQAARSAAKVC---------- 597
Cdd:TIGR00606 488 SKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHT--TTRTQMEMLTKDKMDKDEQIRKIKsrhsdeltsl 565
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 598 --------ELQSSLSACRKE----------MNSYLQQIEEMKKNYETELERNKEKVSSLQEKLHSttlVCQRSSEEN--- 656
Cdd:TIGR00606 566 lgyfpnkkQLEDWLHSKSKEinqtrdrlakLNKELASLEQNKNHINNELESKEEQLSSYEDKLFD---VCGSQDEESdle 642
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 657 --LQLQLSLQQQQTMLTESSARVSELEESQSQLHRQVSGLEQQLERARVSLQEELSKRQEDNQVKEKKLREINQQNERLS 734
Cdd:TIGR00606 643 rlKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKE 722
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 735 ESVRHLTLEVKKCREELVSKESELERLRKdvgvktsQISCMEESLQHIKSQlISKNDIVMDLEKALNRSEADRRSCSQKV 814
Cdd:TIGR00606 723 KRRDEMLGLAPGRQSIIDLKEKEIPELRN-------KLQKVNRDIQRLKND-IEEQETLLGTIMPEEESAKVCLTDVTIM 794
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 815 EILEGQLQMVQNEFADTLTQLQ--ELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHEVLDMDNALRERQGE-- 890
Cdd:TIGR00606 795 ERFQMELKDVERKIAQQAAKLQgsDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEkl 874
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 891 -----LQQRAKLLGQLDVAIKEhKQELERKVESLQQSLEARERELRDAQRELTDRNMKESQELFACQQKLQKVLKELEET 965
Cdd:TIGR00606 875 qigtnLQRRQQFEEQLVELSTE-VQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNI 953
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|
gi 499039972 966 QGHCEGLSREL-DASKLQTKETEAQLCAVEEELTLKEARWLQSEARLQGM 1014
Cdd:TIGR00606 954 HGYMKDIENKIqDGKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLM 1003
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
529-963 |
6.66e-09 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.82 E-value: 6.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 529 LEEVQPRVAEMEQELSSLQRERDEAQRTALLLQNSLDqltqekqvEVRQNEEFLQSFKEQAArsaakvcELQSSLSACRK 608
Cdd:PRK02224 208 LNGLESELAELDEEIERYEEQREQARETRDEADEVLE--------EHEERREELETLEAEIE-------DLRETIAETER 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 609 EMNSYLQQIEEMKKNYETELERNKEKVSSLQeklhsttlvcqrsseenlqlqlslqqqqtmltESSARVSELEESQSQLH 688
Cdd:PRK02224 273 EREELAEEVRDLRERLEELEEERDDLLAEAG--------------------------------LDDADAEAVEARREELE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 689 RQVSGLEQQLERARVSLQeelskrqednqvkekklrEINQQNERLSESVRHLTLEVKKCREELVSKESELERLRKDVGVK 768
Cdd:PRK02224 321 DRDEELRDRLEECRVAAQ------------------AHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDR 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 769 TSQISCMEESLQhiksqliskndivmDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQK- 847
Cdd:PRK02224 383 REEIEELEEEIE--------------ELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEAl 448
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 848 --------------------VSDERQASVEKLTV---QLRETQRELEERTHEVLDMDNALRERQgELQQRAKLLGQLdva 904
Cdd:PRK02224 449 leagkcpecgqpvegsphveTIEEDRERVEELEAeleDLEEEVEEVEERLERAEDLVEAEDRIE-RLEERREDLEEL--- 524
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 499039972 905 IKEHKQELERKVESLQ------QSLEARERELRDAQRELTDRNMKESQELFACQQKLQKVLKELE 963
Cdd:PRK02224 525 IAERRETIEEKRERAEelreraAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIE 589
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
910-1205 |
7.84e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.34 E-value: 7.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 910 QELERKVESLQ-QSLEARE-RELRDAQRELtdRNMKESQELFACQQKLQKVLKELEETQGHCEGLSRELDASKLQTKETE 987
Cdd:COG1196 196 GELERQLEPLErQAEKAERyRELKEELKEL--EAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELR 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 988 AQLCAVEEELTLKEARWLQSEARLQGMVTGLEQELELEREQhSKELESLQETRGQLLKVSEQISSTMRSSQEQLTV---K 1064
Cdd:COG1196 274 LELEELELELEEAQAEEYELLAELARLEQDIARLEERRREL-EERLEELEEELAELEEELEELEEELEELEEELEEaeeE 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1065 LQQSQTQLEEVSVRFDQTKAQLDQTKTELEHAWKRATHLQSQLDQSQTQHLQSQTQLEQSRTLYEQ-TRAQNSRLQAQLE 1143
Cdd:COG1196 353 LEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERlEEELEELEEALAE 432
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 499039972 1144 HLTAVLNQTRVEAAQLQSQLHASEKSVETSSDSLLIKESEVARLQARISSLGRAADRQHLYN 1205
Cdd:COG1196 433 LEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLL 494
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
906-1226 |
1.02e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 60.07 E-value: 1.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 906 KEHKQELERKVESLQQSLEarerELRDAQRELtDRNMKESQELFACQQKLQKVLKELEETQ-----GHCEGLSRELDASK 980
Cdd:TIGR02168 171 KERRKETERKLERTRENLD----RLEDILNEL-ERQLKSLERQAEKAERYKELKAELRELElallvLRLEELREELEELQ 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 981 LQTKETEAQLCAVEEELTLKEARWLQSEARLQGMvtgleqelelereqhSKELESLQETrgqLLKVSEQISsTMRSSQEQ 1060
Cdd:TIGR02168 246 EELKEAEEELEELTAELQELEEKLEELRLEVSEL---------------EEEIEELQKE---LYALANEIS-RLEQQKQI 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1061 LTVKLQQSQTQLEEVSVRFDQTKAQLDQTKTELehawkraTHLQSQLDQSQTQHLQSQTQLEQSRTLYEQTRAQNSRLQA 1140
Cdd:TIGR02168 307 LRERLANLERQLEELEAQLEELESKLDELAEEL-------AELEEKLEELKEELESLEAELEELEAELEELESRLEELEE 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1141 QLEHLTAVLNQTRVEAAQLQSQLHASEKSVETSsdsllikESEVARLQARISSLGRAADRQHLYNHSTSLSSLHKVTDSP 1220
Cdd:TIGR02168 380 QLETLRSKVAQLELQIASLNNEIERLEARLERL-------EDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEEL 452
|
....*.
gi 499039972 1221 QLCLSA 1226
Cdd:TIGR02168 453 QEELER 458
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
864-1207 |
1.44e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 59.57 E-value: 1.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 864 RETQRELEErTHEVLDMdnaLRERQGELQQRAKLLGQlDVAIKEHKQELERKVESLQQSLEARERELRDAQRELTDRNMK 943
Cdd:COG1196 175 EEAERKLEA-TEENLER---LEDILGELERQLEPLER-QAEKAERYRELKEELKELEAELLLLKLRELEAELEELEAELE 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 944 ESQ-ELFACQQKLQKVLKELEETQGHCEGLSRELDASKLQTKETEAQLCAVEEELTLKEARWLQSEARLQGmvtgLEQEL 1022
Cdd:COG1196 250 ELEaELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEE----LEEEL 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1023 ELEREQHSKELESLQETRGQLLKVSEQISSTMRSSQEQLTVKLQQSQTQLEEVSVRFDQTKAQLDQTKTELEHAwKRATH 1102
Cdd:COG1196 326 AELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELA-AQLEE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1103 LQSQLDQSQTQHLQSQTQLEQSRTLYEQTRAQNSRLQAQLEHLTAVLNQTRVEAAQLQSQLHASEKSVETSSDSLLIKES 1182
Cdd:COG1196 405 LEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLE 484
|
330 340
....*....|....*....|....*
gi 499039972 1183 EVARLQARISSLGRAADRQHLYNHS 1207
Cdd:COG1196 485 ELAEAAARLLLLLEAEADYEGFLEG 509
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
423-1094 |
1.95e-08 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 58.96 E-value: 1.95e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 423 YQSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQEKTSAYSLAALKNTELETQLQE----------KTSSVQHYQSL 492
Cdd:pfam05483 80 YSKLYKEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEeiqenkdlikENNATRHLCNL 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 493 LTK---KQREYQQSLEKWQQSHSHQFTEQQQRIQMLQLSLEEVQPRVAEMEQELSSLQRERDEaqrtalllqnSLDQLTQ 569
Cdd:pfam05483 160 LKEtcaRSAEKTKKYEYEREETRQVYMDLNNNIEKMILAFEELRVQAENARLEMHFKLKEDHE----------KIQHLEE 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 570 EKQVEVRQNEEFLQSFKEQAARSAAKVCELQSSLSACRKEMNSY----------LQQIEEMKKNYETELE-------RNK 632
Cdd:pfam05483 230 EYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLeektklqdenLKELIEKKDHLTKELEdikmslqRSM 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 633 EKVSSLQEKLH-STTLVCQRSSEENLQLQLSLQQQQT---MLTESSARVSELEESQSQLHRQVSGLEQQLERARVSLQEE 708
Cdd:pfam05483 310 STQKALEEDLQiATKTICQLTEEKEAQMEELNKAKAAhsfVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKK 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 709 LSKRQEDNQVKEKKLREINQQNERLSESVRHL--TLEVKKCREELVSKESELERLRKdvgVKTSQISCMEESLQHIKSQL 786
Cdd:pfam05483 390 SSELEEMTKFKNNKEVELEELKKILAEDEKLLdeKKQFEKIAEELKGKEQELIFLLQ---AREKEIHDLEIQLTAIKTSE 466
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 787 ISKNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRET 866
Cdd:pfam05483 467 EHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNL 546
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 867 QRELEERTHEVLDMDNALRERQGELQQRAKLLGQLDVAIKEHKQELERKVESLQQSLEARERELRDAQRE---LTDRNMK 943
Cdd:pfam05483 547 RDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQEnkaLKKKGSA 626
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 944 ESQELFACQQKLQKVLKELEETQGHCEGLSRELDASKLQTKETEAQLCAVEE--ELTLKEARWLQSE--ARLQGMVTGLE 1019
Cdd:pfam05483 627 ENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEkaKAIADEAVKLQKEidKRCQHKIAEMV 706
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 499039972 1020 QELELEREQHSKELESLQETRGqLLKVSEQISSTMRSSqeqLTVKLQQSQTQLEEVSVRFDQTKAQLDQTKTELE 1094
Cdd:pfam05483 707 ALMEKHKHQYDKIIEERDSELG-LYKNKEQEQSSAKAA---LEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAK 777
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
362-1133 |
2.26e-08 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 58.83 E-value: 2.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 362 AAHLMKLKPGEGYQQLTRVLqskEAERLKQSNLIERLQDRLSRAQEEISSLQSSMA-----QRASHYQSLHTELLDKLKQ 436
Cdd:TIGR00618 154 FAQFLKAKSKEKKELLMNLF---PLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLtlctpCMPDTYHERKQVLEKELKH 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 437 ATDTEKELKKKKARVAALEKQLQEKTSAYSLAAlkntelETQLQEKTSSVQHYQSLLTKKQREYQQSLEKWQQSHSHQFT 516
Cdd:TIGR00618 231 LREALQQTQQSHAYLTQKREAQEEQLKKQQLLK------QLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQ 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 517 EQQQRIQMLQlsleEVQPRVAEMEQELSslQRERDEAQRTALLLQNSLDQLTQEKQVEVRQNEEFLQSFKEQAARsaakv 596
Cdd:TIGR00618 305 IEQQAQRIHT----ELQSKMRSRAKLLM--KRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQ----- 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 597 celqsslsacRKEMNSYLQQIEEMKKNYETELERNKEKVSSLQEKLHSTTLVCQRSSEENLQLQLSLQQQqtmltessar 676
Cdd:TIGR00618 374 ----------QHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQ---------- 433
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 677 vsELEESQSQLHRQVSGLEQQLERARVSLQEELSKRQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKCREELVSKES 756
Cdd:TIGR00618 434 --ELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCI 511
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 757 ELERLRKDVGVKTSQISCMEESLQHIKSqliskndivmdLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQ 836
Cdd:TIGR00618 512 HPNPARQDIDNPGPLTRRMQRGEQTYAQ-----------LETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDN 580
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 837 ELKDVLQKTQKVSDERQASVEKLT----VQLRETQRELEERTHEVLDMDNALRERQGELQQRAKLLG----QLDVAIKEH 908
Cdd:TIGR00618 581 RSKEDIPNLQNITVRLQDLTEKLSeaedMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTAlhalQLTLTQERV 660
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 909 KQELERKVESLQQSLEARERELRDAQRELtDRNMKESQELFACQQKLQKVLKELEETQGHCEGLSRELDA--SKLQTKET 986
Cdd:TIGR00618 661 REHALSIRVLPKELLASRQLALQKMQSEK-EQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSlgSDLAARED 739
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 987 EAQLCAVEEELTLKEARWLQSEARLQGMVTGLEQELELEREQHSK-----ELESLQETRGQLLKVSEQISSTMRSSQEQL 1061
Cdd:TIGR00618 740 ALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAaeiqfFNRLREEDTHLLKTLEAEIGQEIPSDEDIL 819
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 499039972 1062 TVKLQQSQTQLEEVSVRFDQTKAQLDQTKTELEHAWKRATHLQsQLDQSQTQHLQSQTQLEQSRTLYEQTRA 1133
Cdd:TIGR00618 820 NLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLA-QLTQEQAKIIQLSDKLNGINQIKIQFDG 890
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
411-1130 |
4.34e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 58.23 E-value: 4.34e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 411 SLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAALEK----QLQEKTSAYSLAALKNTELETQLQEKTSSV 486
Cdd:PTZ00121 1009 SFTALTANTIDFNQNFNIEKIEELTEYGNNDDVLKEKDIIDEDIDGnhegKAEAKAHVGQDEGLKPSYKDFDFDAKEDNR 1088
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 487 QHYQSLLTKKQREYQQSLEKWQQSHSHQFTEQQQRIQMLQlSLEEV----------QPRVAEmEQELSSLQRERDEAQRT 556
Cdd:PTZ00121 1089 ADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDAR-KAEEArkaedarkaeEARKAE-DAKRVEIARKAEDARKA 1166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 557 ALLLQNSLDQLTQE--KQVEVRQNEEFLQS---FKEQAARSAAKVCELQSSLSACRKEMNSYLQQIEEMKKNYE----TE 627
Cdd:PTZ00121 1167 EEARKAEDAKKAEAarKAEEVRKAEELRKAedaRKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEeakkAE 1246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 628 LERNKEKVSSLQEKLHSTTLVCQ--------RSSEENLQLQLSLQQQQTMLTESSARVSELEEsQSQLHRQVSGLEQQLE 699
Cdd:PTZ00121 1247 EERNNEEIRKFEEARMAHFARRQaaikaeeaRKADELKKAEEKKKADEAKKAEEKKKADEAKK-KAEEAKKADEAKKKAE 1325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 700 RARVSLQ------EELSKRQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKCREEL------VSKESELERLRKDVGV 767
Cdd:PTZ00121 1326 EAKKKADaakkkaEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAkkkaeeKKKADEAKKKAEEDKK 1405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 768 KTSQISCMEESLQHiKSQLISKNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQK 847
Cdd:PTZ00121 1406 KADELKKAAAAKKK-ADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKK 1484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 848 vSDERQASVEKLTVQLRETQRELEER--THEVLDMDNALRERQGELQQRAKLLGQLDVAIKEHKQELERKVESLQQSLEA 925
Cdd:PTZ00121 1485 -ADEAKKKAEEAKKKADEAKKAAEAKkkADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEK 1563
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 926 RERElrDAQRELTDRNM--KESQELFACQQKLQKVLKEL--EETQGHCEGLSRE----LDASKLQTKETEAQLCAVEEEL 997
Cdd:PTZ00121 1564 KKAE--EAKKAEEDKNMalRKAEEAKKAEEARIEEVMKLyeEEKKMKAEEAKKAeeakIKAEELKKAEEEKKKVEQLKKK 1641
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 998 TLKEARWLQSEARLQGMVTGLEQELELEREQHSKELESLQETRGQLLKVSEQISSTMRSSQ--EQLTVKLQQSQTQLEEV 1075
Cdd:PTZ00121 1642 EAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKkaEELKKKEAEEKKKAEEL 1721
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*.
gi 499039972 1076 SVRFDQTKAQLDQTKTELEHAWKRATHLQ-SQLDQSQTQHLQSQTQLEQSRTLYEQ 1130
Cdd:PTZ00121 1722 KKAEEENKIKAEEAKKEAEEDKKKAEEAKkDEEEKKKIAHLKKEEEKKAEEIRKEK 1777
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
381-1100 |
4.46e-08 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 58.06 E-value: 4.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 381 LQSKEAERLKQSNLIERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQE 460
Cdd:pfam02463 267 LAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKE 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 461 KTSAYSL-------AALKNTELETQLQEKTSSVQHYQSLLTKKQREYQQSLEKWQQSHSHQFTEQQ--QRIQMLQLSLEE 531
Cdd:pfam02463 347 LEIKREAeeeeeeeLEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLElaRQLEDLLKEEKK 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 532 VQPRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQEKQVEVRQNEEFLQSFKEQAARsaakvcelqsslsacRKEMN 611
Cdd:pfam02463 427 EELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQL---------------ELLLS 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 612 SYLQQIEEMKKNYETELERNKEKVSSLQEKLHSTTLVCQRSSEENLQLQLSLQQQQTMLTESSARVSELEESQSQLHRQV 691
Cdd:pfam02463 492 RQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALT 571
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 692 SGLEQQLERARVSLQEELSKRQEDNQVKEKKLREINQQ---NERLSESVRHLTLEVK-KCREELVSKESELERLRKDVGV 767
Cdd:pfam02463 572 ELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDkatLEADEDDKRAKVVEGIlKDTELTKLKESAKAKESGLRKG 651
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 768 KTSQISCMEESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQk 847
Cdd:pfam02463 652 VSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEA- 730
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 848 vSDERQASVEKLTVQLRETQRELEERTHEVLDMDNalrERQGELQQRAKLLGQLDVAIKEHKQELERKVESLQQSLEARE 927
Cdd:pfam02463 731 -QDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEE---EKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRAL 806
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 928 RELRDAQRELTDRNMKESQELFACQQKLQKVLKELEETqghcEGLSRELDASKLQTKETEAQLCAVEEELTLKEARWLQS 1007
Cdd:pfam02463 807 EEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKE----EQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQ 882
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1008 EARLqgmvtgleqeLELEREQHSKELESLQETRGQLLKVSEQISSTMRSSQEQLTVKLQQSQTQLEEVSVRFDQTKAQLD 1087
Cdd:pfam02463 883 KLKD----------ELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEE 952
|
730
....*....|...
gi 499039972 1088 QTKTELEHAWKRA 1100
Cdd:pfam02463 953 NNKEEEEERNKRL 965
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
394-936 |
4.97e-08 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 57.52 E-value: 4.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 394 LIERLQDR--LSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKK------KARVAALEKQLQEKTSAY 465
Cdd:pfam10174 163 LLEMLQSKglPKKSGEEDWERTRRIAEAEMQLGHLEVLLDQKEKENIHLREELHRRnqlqpdPAKTKALQTVIEMKDTKI 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 466 SLAALKNTELETQLQE-KTSSVQH-YQSLLTKKQREYQQSLEKWQQSHSHQFTEQQQR----IQMLQLSLEEVQPRVAEM 539
Cdd:pfam10174 243 SSLERNIRDLEDEVQMlKTNGLLHtEDREEEIKQMEVYKSHSKFMKNKIDQLKQELSKkeseLLALQTKLETLTNQNSDC 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 540 EQELSSLQRERDEAQRTALLLQNSLDQLT---QEKQVEVRQNEEFLQSFKEQAARSAAKVCELQSSLSACRKEMNSYLQQ 616
Cdd:pfam10174 323 KQHIEVLKESLTAKEQRAAILQTEVDALRlrlEEKESFLNKKTKQLQDLTEEKSTLAGEIRDLKDMLDVKERKINVLQKK 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 617 IE---EMKKNYETELERNKEKVSSLQEKLHSTtlvcqrsseenlqlqlslqqqQTMLTEssarvseLEESQSQLHRQVSG 693
Cdd:pfam10174 403 IEnlqEQLRDKDKQLAGLKERVKSLQTDSSNT---------------------DTALTT-------LEEALSEKERIIER 454
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 694 LEQQLERARVSLQEELSKRQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKCREELVSKESELERLRKDVGVKTSQIS 773
Cdd:pfam10174 455 LKEQREREDRERLEELESLKKENKDLKEKVSALQPELTEKESSLIDLKEHASSLASSGLKKDSKLKSLEIAVEQKKEECS 534
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 774 CMEESLQHIKSQLISK------NDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQK 847
Cdd:pfam10174 535 KLENQLKKAHNAEEAVrtnpeiNDRIRLLEQEVARYKEESGKAQAEVERLLGILREVENEKNDKDKKIAELESLTLRQMK 614
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 848 vsderqaSVEKLTVQLRETQRELEERTHEVLDmDNALRERQGELQQRAKLLGQLDVAIKEHKQELE---RKVESLQQSLE 924
Cdd:pfam10174 615 -------EQNKKVANIKHGQQEMKKKGAQLLE-EARRREDNLADNSQQLQLEELMGALEKTRQELDatkARLSSTQQSLA 686
|
570
....*....|..
gi 499039972 925 ARERELRDAQRE 936
Cdd:pfam10174 687 EKDGHLTNLRAE 698
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
118-610 |
7.87e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 56.97 E-value: 7.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 118 RQLEAELEAQAKELKAAELRAECCQEAAAHSDIVVATLTEELSTLREELEKKTAlgkraeqqrnqALENAEKLKEAFKDy 197
Cdd:PRK02224 212 ESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRE-----------TIAETEREREELAE- 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 198 kaTISIKLKRVMESENKLKGSLIECDRE----------KEELEMKCTELERQKAEHRQTISQLTEEVKQFKAAAARLQAQ 267
Cdd:PRK02224 280 --EVRDLRERLEELEEERDDLLAEAGLDdadaeavearREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEER 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 268 IEEAGHKASHLERQLMERGAEcrdVASLRRELEDLRAVTHSQEQKVAQSQKEAQLSQTELAGLEAILSLLHLREGTLGQ- 346
Cdd:PRK02224 358 AEELREEAAELESELEEAREA---VEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEAt 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 347 --------------ICASPCMLPPVDYTGAAHL-------------------MKLKPGEGYQQLTRVLQSKEAERlkqsn 393
Cdd:PRK02224 435 lrtarerveeaealLEAGKCPECGQPVEGSPHVetieedrerveeleaeledLEEEVEEVEERLERAEDLVEAED----- 509
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 394 LIERLQDRLSRAQEEISSLQSSMAQRASHYQSLH-------TELLDKLKQATDTEKELKKKKARVAALEKQLQEKTS--- 463
Cdd:PRK02224 510 RIERLEERREDLEELIAERRETIEEKRERAEELReraaeleAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKErie 589
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 464 -----AYSLAALKNTELETQ-LQEKTSSVQHyqslLTKKQREYQQSLEKWQQSHSHQFTEqqQRIQMLQLSLEEVQPRVA 537
Cdd:PRK02224 590 sleriRTLLAAIADAEDEIErLREKREALAE----LNDERRERLAEKRERKRELEAEFDE--ARIEEAREDKERAEEYLE 663
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 499039972 538 EMEQELSSLQRERDEAQRTALLLQNSLDQLT--QEKQVEVRQNEEFLQSFKEQAArsaakvcELQSSLSACRKEM 610
Cdd:PRK02224 664 QVEEKLDELREERDDLQAEIGAVENELEELEelRERREALENRVEALEALYDEAE-------ELESMYGDLRAEL 731
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
182-825 |
9.89e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 57.00 E-value: 9.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 182 QALENAEKLKEAFKDYKATISIKLKRVMESENKLKGSLIECDREKEELEM---KCTELERQKAEHRQTISQLTEEVKQfk 258
Cdd:PRK03918 186 KRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEElkeEIEELEKELESLEGSKRKLEEKIRE-- 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 259 aaaarLQAQIEEAGHKASHLERQLmERGAECRDVASLRRELEDLRAVTHSQEQKVaqsQKEAQLSQTELAGLEAILSLLH 338
Cdd:PRK03918 264 -----LEERIEELKKEIEELEEKV-KELKELKEKAEEYIKLSEFYEEYLDELREI---EKRLSRLEEEINGIEERIKELE 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 339 LREGTLGQIcaspcmlppvdytgaahLMKLKPGEgyqqltrvlqsKEAERLKQSnliERLQDRLSRAQEEISSLQSSMAQ 418
Cdd:PRK03918 335 EKEERLEEL-----------------KKKLKELE-----------KRLEELEER---HELYEEAKAKKEELERLKKRLTG 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 419 RAShyQSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQEKTSAysLAALKNTELETQLQEKTSSVQHYQSLLTKKQR 498
Cdd:PRK03918 384 LTP--EKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKA--IEELKKAKGKCPVCGRELTEEHRKELLEEYTA 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 499 EYQQSLEKwqqshshqfteqqqriqmlqlsLEEVQPRVAEMEQELSSLQRERDEaQRTALLLQNSLDQLTQ-EKQVEVRQ 577
Cdd:PRK03918 460 ELKRIEKE----------------------LKEIEEKERKLRKELRELEKVLKK-ESELIKLKELAEQLKElEEKLKKYN 516
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 578 NEEFlqsfkEQAARSAAKVCELQSSLSACRKEMNSYLQQIEEMKKNYEtELERNKEKVSSLQEKLHSTTLVCQRSSEEnl 657
Cdd:PRK03918 517 LEEL-----EKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLA-ELEKKLDELEEELAELLKELEELGFESVE-- 588
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 658 qlqlslqqqqtmltESSARVSELEESQSQ---LHRQVSGLEQQLERaRVSLQEELSKRQEDNQVKEKKLREINQQNERLS 734
Cdd:PRK03918 589 --------------ELEERLKELEPFYNEyleLKDAEKELEREEKE-LKKLEEELDKAFEELAETEKRLEELRKELEELE 653
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 735 esVRHLTLEVKKCREELVSKESELERLRKDVGVKTSQISCMEESLQHIKSQLI---SKNDIVMDLEKALNRSEADRRSCS 811
Cdd:PRK03918 654 --KKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEereKAKKELEKLEKALERVEELREKVK 731
|
650
....*....|....*
gi 499039972 812 Q-KVEILEGQLQMVQ 825
Cdd:PRK03918 732 KyKALLKERALSKVG 746
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
917-1184 |
1.21e-07 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 56.46 E-value: 1.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 917 ESLQQSLEA-RERELRDAQRELTDRNMKESQELFacqQKLQKVLKELEEtqghcegLSRELDASKLQTKETEAQLCAVEE 995
Cdd:PRK11281 39 ADVQAQLDAlNKQKLLEAEDKLVQQDLEQTLALL---DKIDRQKEETEQ-------LKQQLAQAPAKLRQAQAELEALKD 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 996 ELTLKEARWL--QSEARLQGMVTgleqelelereqhsKELESLQETRGQLLKVSEQISsTMRSSQEQLTVKLQQSQTQLE 1073
Cdd:PRK11281 109 DNDEETRETLstLSLRQLESRLA--------------QTLDQLQNAQNDLAEYNSQLV-SLQTQPERAQAALYANSQRLQ 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1074 EVSVRFDQTKA--------QLDQTKTELehawkraTHLQSQLDQsQTQHLQSQTQL---EQSRtlYEQTRAQNSRLQAQL 1142
Cdd:PRK11281 174 QIRNLLKGGKVggkalrpsQRVLLQAEQ-------ALLNAQNDL-QRKSLEGNTQLqdlLQKQ--RDYLTARIQRLEHQL 243
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 499039972 1143 EHLTAVLNQTRVEAAQLQ-SQLHASEKSVETSSDSLLIKESEV 1184
Cdd:PRK11281 244 QLLQEAINSKRLTLSEKTvQEAQSQDEAARIQANPLVAQELEI 286
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
868-1215 |
1.34e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 56.61 E-value: 1.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 868 RELEERTHEVLDMDNALRERQGELQQRAKLLGQLDVAIKEHKQELERkvesLQQSLEAREReLRDAQRELTDRNMKE-SQ 946
Cdd:TIGR02169 156 RKIIDEIAGVAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLER----LRREREKAER-YQALLKEKREYEGYElLK 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 947 ELFACQQKLQKVLKELEETQGHCEGLSRELDASKLQTKETEAQLCAVEEELT-LKEARWLQSEARLqGMVTGLEQELELE 1025
Cdd:TIGR02169 231 EKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKdLGEEEQLRVKEKI-GELEAEIASLERS 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1026 REQHSKELESLQETRGQLlkvSEQISSTMRssqeqltvKLQQSQTQLEEVSVRFDQTKAQLDQTKTELEHAWKRATHLQS 1105
Cdd:TIGR02169 310 IAEKERELEDAEERLAKL---EAEIDKLLA--------EIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDK 378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1106 QLDQSQTQHLQSQTQLEQSRTLYEQTRAQNSRLQAQLEHLTAVLNQTRVEAAQLQSQLHASEKSVETSSDSLLIKESEVA 1185
Cdd:TIGR02169 379 EFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLE 458
|
330 340 350
....*....|....*....|....*....|
gi 499039972 1186 RLQARISSLgraadRQHLYNHSTSLSSLHK 1215
Cdd:TIGR02169 459 QLAADLSKY-----EQELYDLKEEYDRVEK 483
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
391-622 |
2.27e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.77 E-value: 2.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 391 QSNLIERLQDRLSRAQEEISSLQSSMAQRASHYQSLhtelldkLKQATDTEKELKKKKARVAALEKQLQEKTSAYSLAAL 470
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKAL-------LKQLAALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 471 KNTELETQLQEKTssvQHYQSLLTKKQREYQQSLEKWQQShSHQFTEQQQRIQMLQLSLEEVQPRVAEMEQELSSLQRER 550
Cdd:COG4942 91 EIAELRAELEAQK---EELAELLRALYRLGRQPPLALLLS-PEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 499039972 551 DEAQRTALLLQNSLDQLTQEK---QVEVRQNEEFLQSFKEQAARSAAKVCELQSSLSACRKEMNSYLQQIEEMKK 622
Cdd:COG4942 167 AELEAERAELEALLAELEEERaalEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
121-1174 |
2.79e-07 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 55.57 E-value: 2.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 121 EAELEAQAKELKAAELRAECCQEAAAHSDIVVATLTEELSTLREELEKKTALGKRAEQQRNQALENAEKLKEAFKDYKAT 200
Cdd:pfam01576 4 EEEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEMRARLAARKQELEEILHELESR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 201 IsiklkrvmesenklkgsliecdrekEELEMKCTELERQKAEHRQTISQLTEEVKQFKAAAARLQAQIEEAGHKASHLER 280
Cdd:pfam01576 84 L-------------------------EEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKLEE 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 281 QLMERGAECRDVASLRRELEDLRAVTHSQeqkVAQSQKEAQLSQTELAGLEAILSLLHLRegtlgqicaspcmlppvdyt 360
Cdd:pfam01576 139 DILLLEDQNSKLSKERKLLEERISEFTSN---LAEEEEKAKSLSKLKNKHEAMISDLEER-------------------- 195
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 361 gaahlmKLKPGEGYQQLTRVLQSKEAErlkqsnlIERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATDT 440
Cdd:pfam01576 196 ------LKKEEKGRQELEKAKRKLEGE-------STDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNA 262
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 441 EKELKKKKARVAALEKQLQEKTSAYSLAALKNTELE-------TQLQEKTSSVQHYQSLLTKKQRE---YQQSLEKWQQS 510
Cdd:pfam01576 263 LKKIRELEAQISELQEDLESERAARNKAEKQRRDLGeelealkTELEDTLDTTAAQQELRSKREQEvteLKKALEEETRS 342
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 511 HSHQFTEQQQR----IQMLQLSLEEVQPRVAEMEQELSSLQRERDEAQRTALLLQnsldQLTQEKQVEVRQNEEFLQSFK 586
Cdd:pfam01576 343 HEAQLQEMRQKhtqaLEELTEQLEQAKRNKANLEKAKQALESENAELQAELRTLQ----QAKQDSEHKRKKLEGQLQELQ 418
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 587 EQAARSAAKVCELQSSLSACRKEMNSYLQQIEEMkknyETELERNKEKVSSLQEKLHSTTLVCQRSSEENLQLQLSLQQQ 666
Cdd:pfam01576 419 ARLSESERQRAELAEKLSKLQSELESVSSLLNEA----EGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQL 494
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 667 QTMLTESSARVSELEESQSQLHRQVSGLEQQLERARVSLQEELSKRQEDNQVKEKKLREINQQNERLSESvrhlTLEVKK 746
Cdd:pfam01576 495 EDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEK----AAAYDK 570
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 747 CREELVSKESELERLRKDVGVKTSQISCMEESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQmvqn 826
Cdd:pfam01576 571 LEKTKNRLQQELDDLLVDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEERDRAEAEAREKETRALSLARALE---- 646
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 827 EFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEErthEVLDMDNALRERQGELQQRAKLLGQLDVAIK 906
Cdd:pfam01576 647 EALEAKEELERTNKQLRAEMEDLVSSKDDVGKNVHELERSKRALEQ---QVEEMKTQLEELEDELQATEDAKLRLEVNMQ 723
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 907 EHKQELERKVESLQQSLEAREREL----RDAQRELTDRNMKESQELfACQQKLQKVLKELEetqGHCEGLSRELDASKLQ 982
Cdd:pfam01576 724 ALKAQFERDLQARDEQGEEKRRQLvkqvRELEAELEDERKQRAQAV-AAKKKLELDLKELE---AQIDAANKGREEAVKQ 799
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 983 TKETEAQLCAVEEEltLKEARWLQSEARLQgmvtglEQELELEREQHSKELESLQETRGQLLKVSEQISSTMRSSQEQLT 1062
Cdd:pfam01576 800 LKKLQAQMKDLQRE--LEEARASRDEILAQ------SKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDELADEIA 871
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1063 VKLQQSQTQLEE---VSVRFDQTKAQLDQTKTELEHAWKRATHLQSQLDQSQTQHLQSQTQLEQSRTLYEQTRAQNSRLQ 1139
Cdd:pfam01576 872 SGASGKSALQDEkrrLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQNKELK 951
|
1050 1060 1070
....*....|....*....|....*....|....*.
gi 499039972 1140 AQLEHL-TAVLNQTRVEAAQLQSQLHASEKSVETSS 1174
Cdd:pfam01576 952 AKLQEMeGTVKSKFKSSIAALEAKIAQLEEQLEQES 987
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
190-798 |
3.08e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 55.12 E-value: 3.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 190 LKEAFKDYKATISIKLKRVMESENKLKGSLIECDREKEEL-EMKCTELERQKAEHRQTISQLTEEVKQFKAAAARLQAQI 268
Cdd:pfam15921 222 ISKILRELDTEISYLKGRIFPVEDQLEALKSESQNKIELLlQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQL 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 269 EEAGHKASHLERQLMERGAECRDVASLRREleDLRAVTHSQEQKVAQSQKEAQLSQTELAGLEAILSLLHLREGTLGQic 348
Cdd:pfam15921 302 EIIQEQARNQNSMYMRQLSDLESTVSQLRS--ELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDD-- 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 349 aspcmlppvdytgaaHLMKLKPGEGYQQLTRVLQSKEAERL-----KQSNLIERLQDRLSRAQEEISSLQSSMAQRASHY 423
Cdd:pfam15921 378 ---------------QLQKLLADLHKREKELSLEKEQNKRLwdrdtGNSITIDHLRRELDDRNMEVQRLEALLKAMKSEC 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 424 QSLHTELL-------DKLKQATDTEKELKKKKARVAALEKQLQEKTSAYSLAALKNTELETQLQEKTSSVQHYQSLLTKK 496
Cdd:pfam15921 443 QGQMERQMaaiqgknESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKL 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 497 QREYQQSLEKWQ--QSHSHQFTEQQQRIQMLQLSLEEVQPRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLtqEKQVE 574
Cdd:pfam15921 523 RSRVDLKLQELQhlKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQL--EKEIN 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 575 VRQNEefLQSFKEQAARSAAKVCELQSSLSACRKEM-------NSYLQQIEEMKKNYE---TELERNKEKVSSLQEKLHs 644
Cdd:pfam15921 601 DRRLE--LQEFKILKDKKDAKIRELEARVSDLELEKvklvnagSERLRAVKDIKQERDqllNEVKTSRNELNSLSEDYE- 677
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 645 ttlVCQRSSEENLQLQLSLQQQQTMLTESSArvSELEESQSQLhRQVSGLEQQLERARVSLQEELSKR-------QEDNQ 717
Cdd:pfam15921 678 ---VLKRNFRNKSEEMETTTNKLKMQLKSAQ--SELEQTRNTL-KSMEGSDGHAMKVAMGMQKQITAKrgqidalQSKIQ 751
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 718 VKEKKLREINQQNERLSESVRHLTLEVKKCREELVSKESELERLRKDVGVKTSQISCMEESLQHIKSQLISKNDIVMDLE 797
Cdd:pfam15921 752 FLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQE 831
|
.
gi 499039972 798 K 798
Cdd:pfam15921 832 Q 832
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
120-758 |
4.04e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.15 E-value: 4.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 120 LEAELEAQAKELKAAE--LRAECCQEAAAHSDIVVATLTEELSTLREELEKKtalGKRAEQQRNQALENAEKLKEAFKDY 197
Cdd:PTZ00121 1272 IKAEEARKADELKKAEekKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKK---AEEAKKKADAAKKKAEEAKKAAEAA 1348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 198 KATISIKLKRVMESENKLKGsliecDREKEELEMKCTELERQKAEHRQTISQLTEEVKQFKAAAARLQAQiEEAGHKASH 277
Cdd:PTZ00121 1349 KAEAEAAADEAEAAEEKAEA-----AEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKA-AAAKKKADE 1422
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 278 LERQLME--RGAECRDVASLRRELEDLRAVTHSQEQKVAQSQKEAQLSQTELAGLEAilsllhlregtlgqicaspcmlp 355
Cdd:PTZ00121 1423 AKKKAEEkkKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKA----------------------- 1479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 356 pvDYTGAAHLMKLKPGEGyqqltrvlqSKEAERLKQSNLIERLQDRLSRAQEEISSLQSSMAQRASHYQSL----HTELL 431
Cdd:PTZ00121 1480 --EEAKKADEAKKKAEEA---------KKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAkkaeEKKKA 1548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 432 DKLKQATDTEKELKKKKARVAALEKQLQEktsayslAALKNTELETQLQEKtsSVQHYQSLLTKKQREYQQSLEKwqqsh 511
Cdd:PTZ00121 1549 DELKKAEELKKAEEKKKAEEAKKAEEDKN-------MALRKAEEAKKAEEA--RIEEVMKLYEEEKKMKAEEAKK----- 1614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 512 shqftEQQQRIQMLQLSLEEvqprvaEMEQELSSLQRERDEAQRTALLLQNSLDQLTQEKQVEVRQNEEflqsfKEQAAR 591
Cdd:PTZ00121 1615 -----AEEAKIKAEELKKAE------EEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEE-----DKKKAE 1678
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 592 SAAKVCELQSSLSACRKEMNSYLQQIEEMKKNYETElERNKEKVSSLQEKLHSTTLVCQRSSEENLQLQLSlqqqqtmlt 671
Cdd:PTZ00121 1679 EAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEE-KKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEE--------- 1748
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 672 essARVSELEESQSQ--LHRQVSGLEQQLERARVSLQEELSKRQEDNQVK-EKKLREINQQNERLSESVRHLTLEVKKCR 748
Cdd:PTZ00121 1749 ---AKKDEEEKKKIAhlKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEvDKKIKDIFDNFANIIEGGKEGNLVINDSK 1825
|
650
....*....|
gi 499039972 749 EELVSKESEL 758
Cdd:PTZ00121 1826 EMEDSAIKEV 1835
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
522-1162 |
4.33e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 54.74 E-value: 4.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 522 IQMLQLSLEEVQPRVAEMEQELSSLQRErdEAQRTALLLQ---NSLDQLTQEKQVEVRQNEEflqsfKEQAARSAAKvce 598
Cdd:pfam15921 226 LRELDTEISYLKGRIFPVEDQLEALKSE--SQNKIELLLQqhqDRIEQLISEHEVEITGLTE-----KASSARSQAN--- 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 599 lqsslsacrkEMNSYLQQIEEMKKNYETELERNKEKVSSLQEKLHSTTLVCQRSSEENLQLQLSLqqqqtmLTESSARVS 678
Cdd:pfam15921 296 ----------SIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQ------LVLANSELT 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 679 ELEESQSQLHRQVSGLEQQLERarvsLQEELSKRqednqvkEKKLREINQQNERLSESVRHLTLEVKKCREELVSKESEL 758
Cdd:pfam15921 360 EARTERDQFSQESGNLDDQLQK----LLADLHKR-------EKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEV 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 759 ERLrkdvgvktsqiscmEESLQHIKSQLISKNDIVMDLEKALNRSeadrrscSQKVEILEGQLQMVQNEFADTLTQLQEL 838
Cdd:pfam15921 429 QRL--------------EALLKAMKSECQGQMERQMAAIQGKNES-------LEKVSSLTAQLESTKEMLRKVVEELTAK 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 839 KDVLQKTQKvsderqaSVEKLTVQLRETQRELEERTHEVLDMDNALRERQGELQQRAKLlgqldvaiKEHKQELERKVES 918
Cdd:pfam15921 488 KMTLESSER-------TVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNE--------GDHLRNVQTECEA 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 919 LQQSLEARERE---LRDAQRELTDRNMKESQELFACQQKLQKVLKELEETQGHCEGLSRELDASKLQTKETEAQLCAVEE 995
Cdd:pfam15921 553 LKLQMAEKDKVieiLRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLEL 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 996 ElTLKEARWLQSEARLQGMVTGLEQELELEREQHSKELESLQETRGQLLKVSEQISSTMRSSQEQLTVKLQQSQTQLEev 1075
Cdd:pfam15921 633 E-KVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELE-- 709
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1076 svrfdQTKAQLDQTKTELEHAWKRATHLQSQL--DQSQTQHLQSQTQ-LEQSRTLYEQT----RAQNSRLQAQLEHLTAV 1148
Cdd:pfam15921 710 -----QTRNTLKSMEGSDGHAMKVAMGMQKQItaKRGQIDALQSKIQfLEEAMTNANKEkhflKEEKNKLSQELSTVATE 784
|
650
....*....|....
gi 499039972 1149 LNQTRVEAAQLQSQ 1162
Cdd:pfam15921 785 KNKMAGELEVLRSQ 798
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
372-575 |
6.24e-07 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 54.25 E-value: 6.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 372 EGYQQLTRVLQSKEAERLKQ--SNLIERLQDRLSRAQEEISSLQSS--MAQRASHYQSLHTELLDKLKQATDTEKELKKK 447
Cdd:COG3206 159 EAYLEQNLELRREEARKALEflEEQLPELRKELEEAEAALEEFRQKngLVDLSEEAKLLLQQLSELESQLAEARAELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 448 KARVAALEKQLQEKTSAYS-------LAALKN--TELETQLQEKTS-------SVQHYQSLLTKKQREYQQSLEKWQQSH 511
Cdd:COG3206 239 EARLAALRAQLGSGPDALPellqspvIQQLRAqlAELEAELAELSArytpnhpDVIALRAQIAALRAQLQQEAQRILASL 318
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499039972 512 SHQFTEQQQRIQMLQLSLEEVQPRVAEM---EQELSSLQRERDEAQRTALLLQNSLDQLTQEKQVEV 575
Cdd:COG3206 319 EAELEALQAREASLQAQLAQLEARLAELpelEAELRRLEREVEVARELYESLLQRLEEARLAEALTV 385
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
221-1003 |
8.49e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.99 E-value: 8.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 221 ECDREKEELEMKCTELERQKAEH-RQTISQLTEEVKQFKAAAARLQA--QIEEAgHKASHLERQLMERGAECRDVASLRR 297
Cdd:PTZ00121 1080 DFDAKEDNRADEATEEAFGKAEEaKKTETGKAEEARKAEEAKKKAEDarKAEEA-RKAEDARKAEEARKAEDAKRVEIAR 1158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 298 ELEDLRAVTHSQEQKVAQSQKEAQLSqtelaglEAILSLLHLREgtlgqicaspcmlppvdytgAAHLMKLKPGEGYQQL 377
Cdd:PTZ00121 1159 KAEDARKAEEARKAEDAKKAEAARKA-------EEVRKAEELRK--------------------AEDARKAEAARKAEEE 1211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 378 TRVLQSKEAERLKQSNLIERLQDRLSRAQEeisslqSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAALEKQ 457
Cdd:PTZ00121 1212 RKAEEARKAEDAKKAEAVKKAEEAKKDAEE------AKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKK 1285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 458 LQEKtsayslaalknteletqlqektssvqhyqslltKKQREYQQSLEKWQQSHSHQFTEQQQRIQMLQLSLEEVQPRVA 537
Cdd:PTZ00121 1286 AEEK---------------------------------KKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKAD 1332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 538 EMEQELSSLQRERDEAQRTALLLQNSLDQLTQEKQVEVRQNEEflqsfKEQAARSAAKVCELQSSLSACRKEMNSYLQQI 617
Cdd:PTZ00121 1333 AAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEE-----AKKKADAAKKKAEEKKKADEAKKKAEEDKKKA 1407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 618 EEMKKNyetelERNKEKVSSLQEKLHSTtlvcQRSSEENLQLQLSLQQQQTMLTESSARVSELEESQSQLHRQVSGLEQQ 697
Cdd:PTZ00121 1408 DELKKA-----AAAKKKADEAKKKAEEK----KKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKK 1478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 698 LERARVSlqEELSKRQEDNQVKEKKLREINQQNERLSESVRhltLEVKKCREELVSKEselERLRKDVGVKTSQISCMEE 777
Cdd:PTZ00121 1479 AEEAKKA--DEAKKKAEEAKKKADEAKKAAEAKKKADEAKK---AEEAKKADEAKKAE---EAKKADEAKKAEEKKKADE 1550
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 778 SLqhiKSQLISKNDIVMDLEKAlNRSEADRRSCSQKVEILEgqlqmvQNEFAdtltQLQELKDVLQKTQKVSDERQASVE 857
Cdd:PTZ00121 1551 LK---KAEELKKAEEKKKAEEA-KKAEEDKNMALRKAEEAK------KAEEA----RIEEVMKLYEEEKKMKAEEAKKAE 1616
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 858 KLTVQLRETQRELEERTHEvldmdNALRERQGELQQRAKLLgqldvaikeHKQELERKVESLQQSLEARE--RELRDAQR 935
Cdd:PTZ00121 1617 EAKIKAEELKKAEEEKKKV-----EQLKKKEAEEKKKAEEL---------KKAEEENKIKAAEEAKKAEEdkKKAEEAKK 1682
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 936 ELTDRNMKESQELFACQQ--KLQKVLKELEETQGHCEGLSRELDASKLQTKETEAQlcAVEEELTLKEAR 1003
Cdd:PTZ00121 1683 AEEDEKKAAEALKKEAEEakKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKE--AEEDKKKAEEAK 1750
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
192-343 |
1.13e-06 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 53.32 E-value: 1.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 192 EAFKDYKATISIKLKRVMESENK-------LKGSLIE----------CDREKEELEMKCTELERQKAEHRQTISQLTEEV 254
Cdd:COG2433 343 KAYDAYKNKFERVEKKVPPDVDRdevkarvIRGLSIEealeeliekeLPEEEPEAEREKEHEERELTEEEEEIRRLEEQV 422
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 255 KQFKAAAARLQAQIEEAGHKASHLERQLMERGAECRDVASLRRELEDLRAVTHSQEQKVAQSQKEAQLSQTELAGLEAIL 334
Cdd:COG2433 423 ERLEAEVEELEAELEEKDERIERLERELSEARSEERREIRKDREISRLDREIERLERELEEERERIEELKRKLERLKELW 502
|
....*....
gi 499039972 335 SLLHLREGT 343
Cdd:COG2433 503 KLEHSGELV 511
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
101-460 |
1.81e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 52.75 E-value: 1.81e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 101 GPRAGVHNNVVVMSEQIRQLEAELEAQakELKAAELRAECcqeaaahsdIVVATLTEELSTLREELEKKTALGKRAEQQR 180
Cdd:TIGR02168 663 GGSAKTNSSILERRREIEELEEKIEEL--EEKIAELEKAL---------AELRKELEELEEELEQLRKELEELSRQISAL 731
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 181 NQALENAEKLKEAFKDYKATISIKLKRVMESENKLKGSLIECDREKEELEMKCTELERQKAEHRQTISQLTEEVKQFKAA 260
Cdd:TIGR02168 732 RKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAE 811
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 261 AARLQAQIEEAGHKASHLERQLMERGAECRDvasLRRELEDLRAvthsQEQKVAQSQKEAQLSQTELAglEAILSLLHLR 340
Cdd:TIGR02168 812 LTLLNEEAANLRERLESLERRIAATERRLED---LEEQIEELSE----DIESLAAEIEELEELIEELE--SELEALLNER 882
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 341 EGTlgqicaspcmlppvdytgAAHLMKLKpgEGYQQLTRVLQSKEAERLKQSNLIERLQDRLSRAQEEISSLQ---SSMA 417
Cdd:TIGR02168 883 ASL------------------EEALALLR--SELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEvriDNLQ 942
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 499039972 418 QRASHYQSLHTELLDKLKQATDTEKElkKKKARVAALEKQLQE 460
Cdd:TIGR02168 943 ERLSEEYSLTLEEAEALENKIEDDEE--EARRRLKRLENKIKE 983
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
165-721 |
2.78e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 52.04 E-value: 2.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 165 ELEKKTALGKRAEQQRNQALENAEKLKEAFKDYKATISIKLKRVMESENKLKGSLIECDREKEElemKCTELERQKAEHR 244
Cdd:pfam15921 279 EITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYED---KIEELEKQLVLAN 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 245 QTISQLTEEVKQFKAAAARLQAQIEEAGHKASHLERQL-MERGAECR----------DVASLRRELEDLRAVTHSQEQ-- 311
Cdd:pfam15921 356 SELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELsLEKEQNKRlwdrdtgnsiTIDHLRRELDDRNMEVQRLEAll 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 312 KVAQSQKEAQLSQtELAGLEAILSLLHLREGTLGQICASPCMLPPVDYTGAAHLMKLKPGE-GYQQLTRVLQSKEAERLK 390
Cdd:pfam15921 436 KAMKSECQGQMER-QMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSErTVSDLTASLQEKERAIEA 514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 391 QSNLIERLQDRLSRAQEEISSLQSsmaqRASHYQSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQEKTSAYSLAAL 470
Cdd:pfam15921 515 TNAEITKLRSRVDLKLQELQHLKN----EGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQV 590
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 471 KNTELETQLQEKTSSVQHYQSLLTKKQREYQqslekwqqshshqftEQQQRIQMLQLSLEEVQPRVAEMEQELSSLQRER 550
Cdd:pfam15921 591 EKAQLEKEINDRRLELQEFKILKDKKDAKIR---------------ELEARVSDLELEKVKLVNAGSERLRAVKDIKQER 655
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 551 DEAQRTALLLQNSLDQLTQEKQVEVRQNEEFLQSFKEQAARSAAKVCELQSSLSACR---KEMNSYLQQIEEMKKNYETE 627
Cdd:pfam15921 656 DQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQSELEQTRntlKSMEGSDGHAMKVAMGMQKQ 735
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 628 LERNKEKVSSLQEKLHSTTLVCQRSSEE----NLQLQLSLQQQQTMLTESSARVSELEESQSQ---LHRQVSGLEQQLER 700
Cdd:pfam15921 736 ITAKRGQIDALQSKIQFLEEAMTNANKEkhflKEEKNKLSQELSTVATEKNKMAGELEVLRSQerrLKEKVANMEVALDK 815
|
570 580
....*....|....*....|...
gi 499039972 701 ARVSLQE--ELSKRQEDNQVKEK 721
Cdd:pfam15921 816 ASLQFAEcqDIIQRQEQESVRLK 838
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
77-478 |
3.45e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 51.58 E-value: 3.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 77 EQLISDLDAMQYEMATSKSQVYLRgprAGVHNNvvvMSEQIRQLEAELEAQAKEL--KAAELRAEC--CQEAAAHSDIVV 152
Cdd:PRK02224 313 EARREELEDRDEELRDRLEECRVA---AQAHNE---EAESLREDADDLEERAEELreEAAELESELeeAREAVEDRREEI 386
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 153 ATLTEELSTLREELEKKTALGKRAEQQRNQALENAEKLKEAFKDYKATISIKLKRVMESENKLK-GSLIECDREKEELEM 231
Cdd:PRK02224 387 EELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEaGKCPECGQPVEGSPH 466
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 232 KCTelerqKAEHRQTISQLTEEVKQFKAAAARLQAQIEEAgHKASHLERQLmERGAECRDVASLRreLEDLRAVTHSQEQ 311
Cdd:PRK02224 467 VET-----IEEDRERVEELEAELEDLEEEVEEVEERLERA-EDLVEAEDRI-ERLEERREDLEEL--IAERRETIEEKRE 537
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 312 KVAQSQKEAQLSQTELAGLEAILSLLHLRegtlgqicaspcmlppvdytGAAHLMKLKPGEGYQQltrvlqsKEAERLKQ 391
Cdd:PRK02224 538 RAEELRERAAELEAEAEEKREAAAEAEEE--------------------AEEAREEVAELNSKLA-------ELKERIES 590
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 392 SNLIERLQDRLSRAQEEISSLQssmaQRASHYQSLHTELLDKLKQATDTEKELKKK--KARVAALEKQLQEKTSAYSLAA 469
Cdd:PRK02224 591 LERIRTLLAAIADAEDEIERLR----EKREALAELNDERRERLAEKRERKRELEAEfdEARIEEAREDKERAEEYLEQVE 666
|
....*....
gi 499039972 470 LKNTELETQ 478
Cdd:PRK02224 667 EKLDELREE 675
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
830-1204 |
3.53e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 51.69 E-value: 3.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 830 DTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHEVLDMDNALR-----ERQGELQQRAKLLGQLDVA 904
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQllplyQELEALEAELAELPERLEE 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 905 IKEHKQELERKVESLQQSLEARERELRDAQRELTDRNMKESQELFACQQKLQKVLKELEETQGHCEGLSRELDASKLQTK 984
Cdd:COG4717 151 LEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELE 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 985 ETEAQLCAVEEELTLKEARWLQSEARLQGMVTGLEQELELEREQHSKELESLQETRGQLLKVSEQISSTMRSSQEQLTVK 1064
Cdd:COG4717 231 QLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQAL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1065 LQQSQTQLEEVSVRFDQTKAQLDQTKTELEHAWKRATHLQ---SQLDQSQTQHLQSQTQLEQSRTL-------------- 1127
Cdd:COG4717 311 PALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQellREAEELEEELQLEELEQEIAALLaeagvedeeelraa 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1128 ------YEQTRAQNSRLQAQLEHLTAVLNQ--TRVEAAQLQSQLHASEKSVETSSDSLLIKESEVARLQARISSLGRAAD 1199
Cdd:COG4717 391 leqaeeYQELKEELEELEEQLEELLGELEEllEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGE 470
|
....*
gi 499039972 1200 RQHLY 1204
Cdd:COG4717 471 LAELL 475
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
584-1176 |
5.01e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 51.26 E-value: 5.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 584 SFKEQAARSAAKVCELQSSLSACRKEMNSYLQQIEEMKKNYETELERNKEKVSSLQEKLHSTTLV---CQRSSEENLQLQ 660
Cdd:pfam05483 96 SIEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATRHLCNLLketCARSAEKTKKYE 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 661 LSLQqqqtmltESSARVSELEESQSQLHRQVSGLEQQLERARVSLQEELSKRQEDNQ-VKEKKLREINQQNERLSESVRH 739
Cdd:pfam05483 176 YERE-------ETRQVYMDLNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQhLEEEYKKEINDKEKQVSLLLIQ 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 740 LTLEVKKCREE---LVSKESELERLRKDVGVKTSQISCMEESLQHIKSQLiskNDIVMDLEKALNRSEA-------DRRS 809
Cdd:pfam05483 249 ITEKENKMKDLtflLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKEL---EDIKMSLQRSMSTQKAleedlqiATKT 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 810 CSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHEVLDMDNALRERQG 889
Cdd:pfam05483 326 ICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEV 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 890 ELQQRAKLLGQLDVAIKEHKQ------ELERKVESLQQSLEARERELRDAQRELTDRNMKEsqelfacqqklQKVLKELE 963
Cdd:pfam05483 406 ELEELKKILAEDEKLLDEKKQfekiaeELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSE-----------EHYLKEVE 474
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 964 EtqghcegLSRELDASKLQTKEteaqLCAVEEELTLKEARWLQSEARLqgmvtgleqelelereqhSKELESLQETRGQL 1043
Cdd:pfam05483 475 D-------LKTELEKEKLKNIE----LTAHCDKLLLENKELTQEASDM------------------TLELKKHQEDIINC 525
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1044 LKVSEQISSTMRSSQEQLTVKLQQSQTQLEEVSVRFDQTKAQLDQTKTELEHAWKRATHLQSQLDQSQTQHLQSQTQLEQ 1123
Cdd:pfam05483 526 KKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIEN 605
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|...
gi 499039972 1124 SRTLYEQTRAQNSRLQAQLEHLTAVLNQTRVEAAQLQSQLHASEKSVETSSDS 1176
Cdd:pfam05483 606 KNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIIDN 658
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
749-964 |
5.36e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.53 E-value: 5.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 749 EELVSKESELERLRKDVGVKTSQISCMEESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEF 828
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 829 ADTLTQLQELKDVLQKTQKVSDE----RQASVEKLTVQLRETQRELEERTHEVldmdNALRERQGELQQRAKLLGQLDVA 904
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLalllSPEDFLDAVRRLQYLKYLAPARREQA----EELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 905 IKEHKQELERKVESLQQSLEARERELRDAQRELTDRNmKESQELFACQQKLQKVLKELEE 964
Cdd:COG4942 176 LEALLAELEEERAALEALKAERQKLLARLEKELAELA-AELAELQQEAEELEALIARLEA 234
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
404-990 |
5.50e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 50.88 E-value: 5.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 404 RAQEEISSLQSSMAQRASHYQSLHTElldklkqaTDTEKELKKKKARVAALEKQLQEKTSAY---SLAALKNTELETQLQ 480
Cdd:pfam05483 203 RVQAENARLEMHFKLKEDHEKIQHLE--------EEYKKEINDKEKQVSLLLIQITEKENKMkdlTFLLEESRDKANQLE 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 481 EKTSSVQHYQSLLTKKQREYQQSLEKWQQSHSHQFTEQQQRIQMLQLSLEEVQPRVAEMEQELSSLQRERDEAQRTALLL 560
Cdd:pfam05483 275 EKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEF 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 561 QN---SLDQLTQEKQVEVRQNEEFLQSFkeqaarsaakVCELQSSlsacrkemNSYLQQIEEMKKNYETELERNKEKVSS 637
Cdd:pfam05483 355 EAttcSLEELLRTEQQRLEKNEDQLKII----------TMELQKK--------SSELEEMTKFKNNKEVELEELKKILAE 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 638 LQEKLHSttlvcQRSSEENLQLQLSLQQQQTMLTEssARVSELEESQSQLHRQVSGLEQQLERARvSLQEELSKRQEDNQ 717
Cdd:pfam05483 417 DEKLLDE-----KKQFEKIAEELKGKEQELIFLLQ--AREKEIHDLEIQLTAIKTSEEHYLKEVE-DLKTELEKEKLKNI 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 718 VKEKKLREINQQNERLSESVRHLTLEVKKCREELVSKESELERLRKDVGVKTSQISCMEESLQHIKSQLISKNDivmDLE 797
Cdd:pfam05483 489 ELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGD---EVK 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 798 KALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQL-----------QELKDVLQKTQKVSDERQA---SVEKLTVQL 863
Cdd:pfam05483 566 CKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIenknknieelhQENKALKKKGSAENKQLNAyeiKVNKLELEL 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 864 RETQRELEERThevldmDNALRERQGELQQRAKLLGQL-------DVAIKEHKQELERKVESLQQSLEARER-------- 928
Cdd:pfam05483 646 ASAKQKFEEII------DNYQKEIEDKKISEEKLLEEVekakaiaDEAVKLQKEIDKRCQHKIAEMVALMEKhkhqydki 719
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 499039972 929 -ELRDAQREL-TDRNMKESQELFACQQKLQKVLKELEETQGHCEGLSRELDASKLQTKETEAQL 990
Cdd:pfam05483 720 iEERDSELGLyKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKENTAIL 783
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
375-595 |
6.38e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 6.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 375 QQLTRVLQSKEAERLKQSNLIERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAAL 454
Cdd:COG4942 30 EQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEELAEL 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 455 EKQLQEKTSAYSLAALKNTELETQLQEKTSSVQHYQSLLTKKQREYQQSLEkwqqshshqftEQQQRIQMLQLSLEEVQP 534
Cdd:COG4942 110 LRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLA-----------ELAALRAELEAERAELEA 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 499039972 535 RVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQEKQvEVRQNEEFLQSFKEQAARSAAK 595
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELA-ELQQEAEELEALIARLEAEAAA 238
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
385-967 |
7.40e-06 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 50.51 E-value: 7.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 385 EAERLKQSNLIERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKqatDTEKELKKKKARVAALEKQLQEKTSA 464
Cdd:pfam05557 1 RAELIESKARLSQLQNEKKQMELEHKRARIELEKKASALKRQLDRESDRNQ---ELQKRIRLLEKREAEAEEALREQAEL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 465 YSLAALKNTELETQLQEKTSSVQ---HYQSLLTKKQREYQQSLEKWQQshshQFTEQQQRIQMLQLSLEEVQPRVAEMEQ 541
Cdd:pfam05557 78 NRLKKKYLEALNKKLNEKESQLAdarEVISCLKNELSELRRQIQRAEL----ELQSTNSELEELQERLDLLKAKASEAEQ 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 542 ELSSLQRERDEAQRTalllqnslDQLTQEKQVEVRQNEEFLQSFKEQAARsAAKVCELQSSLSACRkEMNSYLQQI---- 617
Cdd:pfam05557 154 LRQNLEKQQSSLAEA--------EQRIKELEFEIQSQEQDSEIVKNSKSE-LARIPELEKELERLR-EHNKHLNENienk 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 618 ---EEMKKNYETELERN---KEKVSSLQEKLHSTTLVCQrsSEENLQLQLSLQQQQTMLTesSARVSELEESQSQLHRQV 691
Cdd:pfam05557 224 lllKEEVEDLKRKLEREekyREEAATLELEKEKLEQELQ--SWVKLAQDTGLNLRSPEDL--SRRIEQLQQREIVLKEEN 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 692 SGLEQ---QLERARVSLQEELSKRQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKCREELVSKESELErlrkdvgvk 768
Cdd:pfam05557 300 SSLTSsarQLEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKERDGYRAILESYDKELT--------- 370
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 769 tsqiscMEESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFaDTLTQLQELKDVLQKTQKV 848
Cdd:pfam05557 371 ------MSNYSPQLLERIEEAEDMTQKMQAHNEEMEAQLSVAEEELGGYKQQAQTLEREL-QALRQQESLADPSYSKEEV 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 849 SDERQasveklTVQLRETQRELEERTHEVLDMDNALRERQGELQQ-RAKLLGQLDVAIKEHKQELERKVESLQQSLEARE 927
Cdd:pfam05557 444 DSLRR------KLETLELERQRLREQKNELEMELERRCLQGDYDPkKTKVLHLSMNPAAEAYQQRKNQLEKLQAEIERLK 517
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 499039972 928 RELRDAQRELTDRNMKESQELFACQQKLQKVLKELEETQG 967
Cdd:pfam05557 518 RLLKKLEDDLEQVLRLPETTSTMNFKEVLDLRKELESAEL 557
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
429-1082 |
8.19e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.68 E-value: 8.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 429 ELLDKLKQATDTEKELKKKKARVAALEkQLQEKTSAYslaalknTELETQLQEktssvqhyqslltkkQREYQQSLEKWQ 508
Cdd:COG4913 229 ALVEHFDDLERAHEALEDAREQIELLE-PIRELAERY-------AAARERLAE---------------LEYLRAALRLWF 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 509 QSHSHQftEQQQRIQMLQLSLEEVQPRVAEMEQELSSLQRERDEAQRTalLLQNSLDQLTQEKQvEVRQNEEFLQSFKEQ 588
Cdd:COG4913 286 AQRRLE--LLEAELEELRAELARLEAELERLEARLDALREELDELEAQ--IRGNGGDRLEQLER-EIERLERELEERERR 360
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 589 AARSAAKVCELQSSLSACRKEMNSYLQQIEEMKKNYETELERNKEKVSSLQEKLHsttlvcqrsseenlqlqlslqqqqt 668
Cdd:COG4913 361 RARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALR------------------------- 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 669 mltESSARVSELEESQSQLHRQVSGLEQQLERARVSLQEELSKRQEDN-------QVKEKKLReinQQN--ERLSESVRh 739
Cdd:COG4913 416 ---DLRRELRELEAEIASLERRKSNIPARLLALRDALAEALGLDEAELpfvgeliEVRPEEER---WRGaiERVLGGFA- 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 740 LTLEVKKCREELVSKEseLERLRKDVGVKTSQiscmeeslqhiksqliskndiVMDLEKALNRSEADRRSCSQKVEILEG 819
Cdd:COG4913 489 LTLLVPPEHYAAALRW--VNRLHLRGRLVYER---------------------VRTGLPDPERPRLDPDSLAGKLDFKPH 545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 820 QLQM-VQNEFA--------DTLTQLQELKDVLQKTQKVSDERQAsvekltvqlRETQRELEERTHEVLDMDN-----ALR 885
Cdd:COG4913 546 PFRAwLEAELGrrfdyvcvDSPEELRRHPRAITRAGQVKGNGTR---------HEKDDRRRIRSRYVLGFDNraklaALE 616
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 886 ERQGELQQRAKLLGQLDVAIKEHKQELERKVESLQQSLEAREREL--RDAQRELTDrnmkesqelfacqqkLQKVLKELE 963
Cdd:COG4913 617 AELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIdvASAEREIAE---------------LEAELERLD 681
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 964 ETQGHCEGLSRELDASKLQTKETEAQLCAVEEELTLKEARWLQSEARLQGMvtgLEQELELEREQHSKELESLQETRGQL 1043
Cdd:COG4913 682 ASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDEL---QDRLEAAEDLARLELRALLEERFAAA 758
|
650 660 670 680
....*....|....*....|....*....|....*....|.
gi 499039972 1044 L--KVSEQISSTMRSSQEQLTVKLQQSQTQLEEVSVRFDQT 1082
Cdd:COG4913 759 LgdAVERELRENLEERIDALRARLNRAEEELERAMRAFNRE 799
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
803-1015 |
8.35e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.76 E-value: 8.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 803 SEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHEVLDMDN 882
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 883 ALRERQGELQQRAKLL------GQLDVAIK-EHKQELERKVESLQQSLEARERELRDAQRELTDRNMKEsQELFACQQKL 955
Cdd:COG4942 98 ELEAQKEELAELLRALyrlgrqPPLALLLSpEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALR-AELEAERAEL 176
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 956 QKVLKELEETQghceglsRELDASKLQTKETEAQLCAVEEELTLKEARWLQSEARLQGMV 1015
Cdd:COG4942 177 EALLAELEEER-------AALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALI 229
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
671-1200 |
8.93e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 50.42 E-value: 8.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 671 TESSARVSELEESQSQLHRQVSGLEQQLERARVSLQEelskrqednqvKEKKLREINQQNERLSEsvrhLTLEVKKCREE 750
Cdd:PRK02224 202 KDLHERLNGLESELAELDEEIERYEEQREQARETRDE-----------ADEVLEEHEERREELET----LEAEIEDLRET 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 751 LVSKESELERLRKDVGVKTSQISCMEESLqhiksqliskNDIVMDLEkalnRSEADRRSCSQKVEILEGQLQMVQNEFAD 830
Cdd:PRK02224 267 IAETEREREELAEEVRDLRERLEELEEER----------DDLLAEAG----LDDADAEAVEARREELEDRDEELRDRLEE 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 831 TLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHEVLDMDNALRERQGELQQRAKLLGQLDVAIKEHKQ 910
Cdd:PRK02224 333 CRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAED 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 911 ELERKVESLQQsLEARERELRDAQRELTDRnMKESQELFA------CQQKLQK--VLKELEETQGHCEGLSRELDASKLQ 982
Cdd:PRK02224 413 FLEELREERDE-LREREAELEATLRTARER-VEEAEALLEagkcpeCGQPVEGspHVETIEEDRERVEELEAELEDLEEE 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 983 TKETEAQLCAVEEeltLKEArwlqsEARLQGMVTgLEQELELEREQHSKELESLQETRGQLLKVSEQISSTMRSSQEQLT 1062
Cdd:PRK02224 491 VEEVEERLERAED---LVEA-----EDRIERLEE-RREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAA 561
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1063 VKLQQSQTQLEEVsvrfdqtkAQLDQTKTELEHAWKRATHLQSQLDQSQTQHLQSQTQLEQSRTLYEQTRAQNSRLQAQL 1142
Cdd:PRK02224 562 EAEEEAEEAREEV--------AELNSKLAELKERIESLERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKR 633
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 499039972 1143 E---HLTAVLNQTRVEAAqlQSQLHASEKSVETSSDSLLIKESEVARLQARISSLGRAADR 1200
Cdd:PRK02224 634 ErkrELEAEFDEARIEEA--REDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEE 692
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
187-938 |
1.09e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 50.22 E-value: 1.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 187 AEKLKEAFKDYK---ATISIKLKRVMESENKLKGSLIECDREKEELEMKCTELERQKAEhrqTISQLTEEVKQFKAAAAR 263
Cdd:pfam12128 243 FTKLQQEFNTLEsaeLRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKE---KRDELNGELSAADAAVAK 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 264 LQAQIE--EAGHKAsHLERQLMERGAECRDVASLRRELEDLRAVTHSQEQKV--------AQSQKEAQLSQTELAGL--- 330
Cdd:pfam12128 320 DRSELEalEDQHGA-FLDADIETAAADQEQLPSWQSELENLEERLKALTGKHqdvtakynRRRSKIKEQNNRDIAGIkdk 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 331 -----EAILSLLHLREGTLGQICA---SPCMLPPVDYTGAAHLMKLKPGEGYQQLTRVLQSKEAERLKQSN--LIERLQD 400
Cdd:pfam12128 399 lakirEARDRQLAVAEDDLQALESelrEQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPELLLQLENFdeRIERARE 478
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 401 RLSRAQEEISSLQSSMAQrashYQSLHTELLDKLKQAtdtEKELKKKKARVAALEKQLQEKtsAYSLAALKNTEL---ET 477
Cdd:pfam12128 479 EQEAANAEVERLQSELRQ----ARKRRDQASEALRQA---SRRLEERQSALDELELQLFPQ--AGTLLHFLRKEApdwEQ 549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 478 QLQEKTSSVQHYQSLLTKKQREYQQS-----------LEKWQQSHSHQFTEQ-QQRIQMLQLSLEEVQPRVAEMEQELSS 545
Cdd:pfam12128 550 SIGKVISPELLHRTDLDPEVWDGSVGgelnlygvkldLKRIDVPEWAASEEElRERLDKAEEALQSAREKQAAAEEQLVQ 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 546 LQRERDEAQR----TALLLQNS---LDQLTQEKQVEVRQNEEFLQSFKEQAARSaakVCELQSSLSACRKEMNSYLQQIE 618
Cdd:pfam12128 630 ANGELEKASReetfARTALKNArldLRRLFDEKQSEKDKKNKALAERKDSANER---LNSLEAQLKQLDKKHQAWLEEQK 706
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 619 EMKKNYETE-LERNKEKVSSLQEKLHSttLVCQRSSEENLQLQLSLQQQQTMLTESSARVSElEESQSQLHRQVSGLEQQ 697
Cdd:pfam12128 707 EQKREARTEkQAYWQVVEGALDAQLAL--LKAAIAARRSGAKAELKALETWYKRDLASLGVD-PDVIAKLKREIRTLERK 783
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 698 LERARVSLQEELSKRQEDNQvkekklrEINQQNERLSESVRHLTLEVKKCREELVSKESELERLRKdvgvKTSQISCMEE 777
Cdd:pfam12128 784 IERIAVRRQEVLRYFDWYQE-------TWLQRRPRLATQLSNIERAISELQQQLARLIADTKLRRA----KLEMERKASE 852
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 778 SLQHIKSQLISKNDIVMdleKALNRSEADRRSCSqkveilegqlqmVQNEFADTLTQLQELKD-----VLQKTQKVSDER 852
Cdd:pfam12128 853 KQQVRLSENLRGLRCEM---SKLATLKEDANSEQ------------AQGSIGERLAQLEDLKLkrdylSESVKKYVEHFK 917
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 853 QASVEKLTVQLRETQRELEERTHEVLDMDNALRERQGELQQRAKLLG----QLDVAIKEHKQELERKVESLQQSLEARER 928
Cdd:pfam12128 918 NVIADHSGSGLAETWESLREEDHYQNDKGIRLLDYRKLVPYLEQWFDvrvpQSIMVLREQVSILGVDLTEFYDVLADFDR 997
|
810
....*....|
gi 499039972 929 ELRDAQRELT 938
Cdd:pfam12128 998 RIASFSRELQ 1007
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
701-929 |
1.11e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 701 ARVSLQEELSKRQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKCREELVSKESELERLRKDVGVKTSQISCMEESLQ 780
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 781 HIKSQL---------ISKNDIVMDLEKALNRSEADRRscSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQktqkvsdE 851
Cdd:COG4942 101 AQKEELaellralyrLGRQPPLALLLSPEDFLDAVRR--LQYLKYLAPARREQAEELRADLAELAALRAELE-------A 171
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499039972 852 RQASVEKLTVQLRETQRELEERTHEVLDMDNALRERQGELQQRAKLLgqldvaiKEHKQELERKVESLQQSLEARERE 929
Cdd:COG4942 172 ERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAEL-------QQEAEELEALIARLEAEAAAAAER 242
|
|
| HMMR_N |
pfam15905 |
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of ... |
672-966 |
1.33e-05 |
|
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of eukaryotic hyaluronan-mediated motility receptor proteins. The protein is functionally associated with BRCA1 and thus predicted to be a common, low-penetrance breast cancer candidate.
Pssm-ID: 464932 [Multi-domain] Cd Length: 329 Bit Score: 49.04 E-value: 1.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 672 ESSARVSELEESQSQLHRQVSGLEQQLERARVSLQEELSKRQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKCREEL 751
Cdd:pfam15905 24 EKSQRFRKQKAAESQPNLNNSKDASTPATARKVKSLELKKKSQKNLKESKDQKELEKEIRALVQERGEQDKRLQALEEEL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 752 VSKESELERLRKDVGVKTSQISCMEESLQHIKSQ---LISK----------NDIVMDLEKALNRSEADRRSCSQKVEILE 818
Cdd:pfam15905 104 EKVEAKLNAAVREKTSLSASVASLEKQLLELTRVnelLKAKfsedgtqkkmSSLSMELMKLRNKLEAKMKEVMAKQEGME 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 819 GQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHEVLDmdnaLRERQGELQQRAKLL 898
Cdd:pfam15905 184 GKLQVTQKNLEHSKGKVAQLEEKLVSTEKEKIEEKSETEKLLEYITELSCVSEQVEKYKLD----IAQLEELLKEKNDEI 259
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499039972 899 GQLDVAIKEHKQELERKVESLQQSLEARERELRDAQRELTDRNMKESQELFACQQKLQKVLKELEETQ 966
Cdd:pfam15905 260 ESLKQSLEEKEQELSKQIKDLNEKCKLLESEKEELLREYEEKEQTLNAELEELKEKLTLEEQEHQKLQ 327
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
780-1222 |
1.37e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 49.73 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 780 QHIKSQLISKNDIVMDLEKALNRSEadrrscsqkvEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKL 859
Cdd:pfam15921 74 EHIERVLEEYSHQVKDLQRRLNESN----------ELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 860 TVQLRETQRELE-----------ERTHEVLDMDNALRERQGELQQRAKLLGQLDVA----IKEHKQELERKVESLQQSLE 924
Cdd:pfam15921 144 RNQLQNTVHELEaakclkedmleDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEAsgkkIYEHDSMSTMHFRSLGSAIS 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 925 ARERELRDAQRELTDRNMKESQELFAC------------QQKLQKVLKELEETQGHCEGLSRELDASKLQTKETEAQLCA 992
Cdd:pfam15921 224 KILRELDTEISYLKGRIFPVEDQLEALksesqnkielllQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 993 VEEELTLKEARWLQSEARLQGMVTGLEQELELEREQHSKELESLQEtrgQLLKVSEQISSTmRSSQEQLTVKLQQSQTQL 1072
Cdd:pfam15921 304 IQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEK---QLVLANSELTEA-RTERDQFSQESGNLDDQL 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1073 EEVSVRFDQTKAQLDQTKTELEHAWKRAT-------HLQSQLDQS--QTQHLQS---------QTQLEQSRTLYE---QT 1131
Cdd:pfam15921 380 QKLLADLHKREKELSLEKEQNKRLWDRDTgnsitidHLRRELDDRnmEVQRLEAllkamksecQGQMERQMAAIQgknES 459
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1132 RAQNSRLQAQLEHLTAVLNQTRVEAAQLQSQLHASEKSVETSSDSLLIKESEVARLQARISSLGRAAD-----RQHLYNH 1206
Cdd:pfam15921 460 LEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDlklqeLQHLKNE 539
|
490
....*....|....*.
gi 499039972 1207 STSLSSLHKVTDSPQL 1222
Cdd:pfam15921 540 GDHLRNVQTECEALKL 555
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
694-1141 |
1.49e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.38 E-value: 1.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 694 LEQQLERARVSLQEELSKRQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKCREELVSKESELERLRKDVGVKTSQIS 773
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 774 CME--ESLQHIKSQLISKNDIVMDLE---KALNRSEADRRSCSQKVEILEGQLQMVQNEF-ADTLTQLQELKDVLQKTQK 847
Cdd:COG4717 127 LLPlyQELEALEAELAELPERLEELEerlEELRELEEELEELEAELAELQEELEELLEQLsLATEEELQDLAEELEELQQ 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 848 VSDERQASVEKLTVQLRETQRELE--ERTHEVLDMDNALRERQGELQQRAKLLGQLDVAIKEHKQELER-KVESLQQSLE 924
Cdd:COG4717 207 RLAELEEELEEAQEELEELEEELEqlENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIaGVLFLVLGLL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 925 ARERELRDAQRELTDRNMKESQELFACQQKLQKVLKELEETQGHCEGLSRELDASKLQTKETEAQLCAVEEELTlKEARW 1004
Cdd:COG4717 287 ALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELE-EELQL 365
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1005 LQSEARLQGMVTGLEQELELEREQHSKELESLQETRGQLLKVSEQISSTMRSSQEQLtvklqqSQTQLEEVSVRFDQTKA 1084
Cdd:COG4717 366 EELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELL------EALDEEELEEELEELEE 439
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 499039972 1085 QLDQTKTELEHAWKRATHLQSQLDQsqtqhLQSQTQLEQSRTLYEQTRAQNSRLQAQ 1141
Cdd:COG4717 440 ELEELEEELEELREELAELEAELEQ-----LEEDGELAELLQELEELKAELRELAEE 491
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
423-950 |
1.65e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.38 E-value: 1.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 423 YQSLHTELLDKLKQATDtekELKKKKARVAALE-KQLQEKTSAYSLAALKNTELEtQLQEKTSSVQHYQSLLTKKQREYQ 501
Cdd:COG4717 40 LAFIRAMLLERLEKEAD---ELFKPQGRKPELNlKELKELEEELKEAEEKEEEYA-ELQEELEELEEELEELEAELEELR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 502 QSLEKWQQSHSHQftEQQQRIQMLQLSLEEVQPRVAEME---QELSSLQRERDEAQRTALLLQNSLDQLTQEKQVEVRQN 578
Cdd:COG4717 116 EELEKLEKLLQLL--PLYQELEALEAELAELPERLEELEerlEELRELEEELEELEAELAELQEELEELLEQLSLATEEE 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 579 eefLQSFKEQAARSAAKVCELQSSLSACRKEMNSYLQQIEEMKKnyETELERNKEKVSSLQEKLHSTTLVCqrsseenlq 658
Cdd:COG4717 194 ---LQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLEN--ELEAAALEERLKEARLLLLIAAALL--------- 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 659 lqlSLQQQQTMLTESSARVSELEESQSQLHRQVSGLEQQLERARVSLQEELSKRQEDNQVKEKKLREINQQNERLSESVR 738
Cdd:COG4717 260 ---ALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSP 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 739 HLTLEVKKCREELVSKESELERLRKDVgvktsQISCMEESLQHIksqliskndivmdLEKALNRSEADRRSCSQKVEile 818
Cdd:COG4717 337 EELLELLDRIEELQELLREAEELEEEL-----QLEELEQEIAAL-------------LAEAGVEDEEELRAALEQAE--- 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 819 gQLQMVQNEFADTLTQLQELKDVLQKTQKVSDErqasvEKLTVQLRETQRELEERTHEVLDMDNALRERQGELQQ--RAK 896
Cdd:COG4717 396 -EYQELKEELEELEEQLEELLGELEELLEALDE-----EELEEELEELEEELEELEEELEELREELAELEAELEQleEDG 469
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 499039972 897 LLGQLDVAIKEHKQELERKVE---SLQQSLEARERELRDAQRELTDRNMKESQELFA 950
Cdd:COG4717 470 ELAELLQELEELKAELRELAEewaALKLALELLEEAREEYREERLPPVLERASEYFS 526
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
901-1143 |
1.68e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 49.24 E-value: 1.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 901 LDVAIKEHKQELERKVESLQQSLEARERELRDAQRELtdRNMKESQELFACQQKLQKVLKELEEtqghcegLSRELDASK 980
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAEAAL--EEFRQKNGLVDLSEEAKLLLQQLSE-------LESQLAEAR 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 981 LQTKETEAQLCAVEEELtlKEARWLQSEARLQGMVTGLEQELELEREQHSKELESLQETRGQLLKVSEQISSTMRSSQEQ 1060
Cdd:COG3206 233 AELAEAEARLAALRAQL--GSGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQE 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1061 LTVKLQQSQTQLEEVSVRFDQTKAQLDQTKTELehawkrathlqSQLDQSQTQHLQSQTQLEQSRTLYEQ--TRAQNSRL 1138
Cdd:COG3206 311 AQRILASLEAELEALQAREASLQAQLAQLEARL-----------AELPELEAELRRLEREVEVARELYESllQRLEEARL 379
|
....*
gi 499039972 1139 QAQLE 1143
Cdd:COG3206 380 AEALT 384
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
938-1158 |
1.77e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.61 E-value: 1.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 938 TDRNMKESQELFACQQKLQKVLKELEETQGHCEGLSRELDASKLQTKETEAQLCAVEEELTLKEARWLQSEARLQGMVTG 1017
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1018 LEQELELEREQHSKELESLQETRGQLLKVSEQISSTMRSSQ--EQLTVKLQQSQTQLEEVSVRFDQTKAQLDQTKTELEH 1095
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQylKYLAPARREQAEELRADLAELAALRAELEAERAELEA 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 499039972 1096 AWKRATHLQSQLDQSQTQHLQSQTQLEQSRTLYEQTRAQNSRLQAQLEHLTAVLNQTRVEAAQ 1158
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
856-977 |
1.80e-05 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 49.09 E-value: 1.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 856 VEKLTVqlRETQRELEERTHEVLDMDNALRERQGELQQRAKLLGQLdvaiKEHKQELERKVESLQQSLEARERELRDAQR 935
Cdd:COG2433 382 LEELIE--KELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERL----EAEVEELEAELEEKDERIERLERELSEARS 455
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 499039972 936 ElTDRNMKESQELFACQQKLQKVLKELEETQGHCEGLSRELD 977
Cdd:COG2433 456 E-ERREIRKDREISRLDREIERLERELEEERERIEELKRKLE 496
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
518-754 |
1.84e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.61 E-value: 1.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 518 QQQRIQMLQLSLEEVQPRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQEkqveVRQNEEFLQSFKEQAARSAAKVC 597
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARR----IRALEQELAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 598 ELQSSLSACRKEMNSYLQQIEEMKKNYETELERNKEKVSSLQEKLHsttlVCQRSSEENLQLQLSLQQQQTMLTESSARV 677
Cdd:COG4942 94 ELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQ----YLKYLAPARREQAEELRADLAELAALRAEL 169
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499039972 678 SELEESQSQLHRQVSGLEQQLERARVSLQEELSKRQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKCREELVSK 754
Cdd:COG4942 170 EAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
1032-1203 |
1.88e-05 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 48.75 E-value: 1.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1032 ELESLQETRGQLLKVSEQISSTMRSSQEQLTVKLQQSQTQLEEVSVRFDQTKAQLDQTKTELEHAWKRATHLQSQLDQSQ 1111
Cdd:COG4372 14 SLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQ 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1112 TQHLQSQTQLEQSRTLYEQTRAQNSRLQAQLEHLTAVLNQTRVEAAQLQSQLHASEKSVETSSDSLLIKESEVARLQARI 1191
Cdd:COG4372 94 AELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQEL 173
|
170
....*....|..
gi 499039972 1192 SSLGRAADRQHL 1203
Cdd:COG4372 174 QALSEAEAEQAL 185
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
669-1200 |
2.04e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 49.13 E-value: 2.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 669 MLTESSARVSELEESQSQLHRQVSGLEQQLERARVSLQEELSKRQEDNQVKEKKLREINQQNERLSEsVRHLTLEVKKCR 748
Cdd:PRK01156 177 MLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNE-LSSLEDMKNRYE 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 749 EELVSKESELERLRKdvgvKTSQISCMEESLQHI------------------KSQLISKNDIVMDLEKALNRSEADRRSC 810
Cdd:PRK01156 256 SEIKTAESDLSMELE----KNNYYKELEERHMKIindpvyknrnyindyfkyKNDIENKKQILSNIDAEINKYHAIIKKL 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 811 SqkveilegQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEkltvQLRETQRELEERTHEVLDMDNALRERQGE 890
Cdd:PRK01156 332 S--------VLQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLK----SIESLKKKIEEYSKNIERMSAFISEILKI 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 891 LQQRAKLLGQLDVAIKEHKQELERKVESLQQSLEA---RERELRDAQRELTDRNMKESQELFACQQKLQKVLKE------ 961
Cdd:PRK01156 400 QEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRAlreNLDELSRNMEMLNGQSVCPVCGTTLGEEKSNHIINHynekks 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 962 -LEETQGHCEGLSRELDASKLQTKETEAQLCAVEEELTLKEARWLQS--------EARLQGMVTGLEQELELEREQHSKE 1032
Cdd:PRK01156 480 rLEEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESaradlediKIKINELKDKHDKYEEIKNRYKSLK 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1033 LESLQETRGQLLKVSEQISS----TMRSSQEQLTVKLQQSQTQLEEVSVRFDQTKAQLDQTKTELEhawKRATHLQSQLD 1108
Cdd:PRK01156 560 LEDLDSKRTSWLNALAVISLidieTNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIE---NEANNLNNKYN 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1109 QSQTQHLQSQTQLEQSRTLYEQTRAQNSRLQAQLEhLTAVLNQTRVEAAQLQSQLHASEKSVETSSDSLLIKESEVARLQ 1188
Cdd:PRK01156 637 EIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKE-ITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELS 715
|
570
....*....|..
gi 499039972 1189 ARISSLGRAADR 1200
Cdd:PRK01156 716 DRINDINETLES 727
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
377-929 |
2.67e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 48.92 E-value: 2.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 377 LTRVLQSKEAERLK-QSNLIERLQDRLSRAQeeISSLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAALE 455
Cdd:COG5022 911 LKKSLSSDLIENLEfKTELIARLKKLLNNID--LEEGPSIEYVKLPELNKLHEVESKLKETSEEYEDLLKKSTILVREGN 988
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 456 KQLQEKTSAYSLAALKNTELETqLQEKTSSVQHYQSLLTKKQREYQQSLEkwQQSHSHQFTEQQQRIQMLQLSLEEVQPR 535
Cdd:COG5022 989 KANSELKNFKKELAELSKQYGA-LQESTKQLKELPVEVAELQSASKIISS--ESTELSILKPLQKLKGLLLLENNQLQAR 1065
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 536 VAEMeqelsSLQRErdeaqrtalllqNSLDQLTQEKQVEVRQNEE------FLQSFKEQAARSAAKVCELQSSLSAcrke 609
Cdd:COG5022 1066 YKAL-----KLRRE------------NSLLDDKQLYQLESTENLLktinvkDLEVTNRNLVKPANVLQFIVAQMIK---- 1124
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 610 mNSYLQQIEEMKKNYETELERNKEKVSSLQEKLHSTtlvcqrSSEENLQLQLSLQQQQTMLTESSARVSELEESQSQLHR 689
Cdd:COG5022 1125 -LNLLQEISKFLSQLVNTLEPVFQKLSVLQLELDGL------FWEANLEALPSPPPFAALSEKRLYQSALYDEKSKLSSS 1197
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 690 QVSGLEQQLErARVSLQEELSKRQEDNQVKEKKLREINQQNERLSESVRhltLEVKKCREELVSKESELERLRKDVGVKT 769
Cdd:COG5022 1198 EVNDLKNELI-ALFSKIFSGWPRGDKLKKLISEGWVPTEYSTSLKGFNN---LNKKFDTPASMSNEKLLSLLNSIDNLLS 1273
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 770 SQISCMEESLQHIKSQLISKNDIVMDL----EKALNRSEADRRSCSQKV--------EILEGQLQMVQNEFADTLTQ--- 834
Cdd:COG5022 1274 SYKLEEEVLPATINSLLQYINVGLFNAlrtkASSLRWKSATEVNYNSEElddwcrefEISDVDEELEELIQAVKVLQllk 1353
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 835 --LQELKDVLQKTQKVSD-ERQASVEKLTVQLRETqrELEERTHEVLDMDNALRERQGELQQRAKLLGQLDVAIKEHKQE 911
Cdd:COG5022 1354 ddLNKLDELLDACYSLNPaEIQNLKSRYDPADKEN--NLPKEILKKIEALLIKQELQLSLEGKDETEVHLSEIFSEEKSL 1431
|
570
....*....|....*...
gi 499039972 912 LERKVESLQQSLEARERE 929
Cdd:COG5022 1432 ISLDRNSIYKEEVLSSLS 1449
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
689-1200 |
2.72e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.76 E-value: 2.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 689 RQVSGLEQQLERARvsLQEELSKRQEDNQVKEKKLREINQQNERLSESVRHLT--LEVKKCREELVSKESELERLRKDVG 766
Cdd:COG4913 235 DDLERAHEALEDAR--EQIELLEPIRELAERYAAARERLAELEYLRAALRLWFaqRRLELLEAELEELRAELARLEAELE 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 767 VKTSQISCMEESLQHIKSQLI-SKNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKT 845
Cdd:COG4913 313 RLEARLDALREELDELEAQIRgNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAAL 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 846 QKVSDERQASVEKLTVQLRETQRELEERTHEVLDMDNALRERQ----GELQQRAKLLGQ---------------LDVAIK 906
Cdd:COG4913 393 LEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKsnipARLLALRDALAEalgldeaelpfvgelIEVRPE 472
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 907 EHKQE--LERKVESLQQSLEARERELRDAQRELTDRNMKESQELfacqQKLQKVLKELEETQGHCEGLSReldasKLQTK 984
Cdd:COG4913 473 EERWRgaIERVLGGFALTLLVPPEHYAAALRWVNRLHLRGRLVY----ERVRTGLPDPERPRLDPDSLAG-----KLDFK 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 985 ETEAQLcAVEEELTLKEARW-------LQSEAR---LQGMVTGLEQELELEREQHS------------------KELESL 1036
Cdd:COG4913 544 PHPFRA-WLEAELGRRFDYVcvdspeeLRRHPRaitRAGQVKGNGTRHEKDDRRRIrsryvlgfdnraklaaleAELAEL 622
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1037 QETRGQLLKVSEQISSTMRSSQEQLTVKLQQSQTQLEEVSVRFDQTK-AQLDQTKTELEHAWKRATHLQSQLDQSQTQHL 1115
Cdd:COG4913 623 EEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREiAELEAELERLDASSDDLAALEEQLEELEAELE 702
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1116 QSQTQLEQSRTLYEQTRAQNSRLQAQLEHLTAVLnQTRVEAAQLQSQLHASEKSVETSSDSLLIKESEvaRLQARISSLG 1195
Cdd:COG4913 703 ELEEELDELKGEIGRLEKELEQAEEELDELQDRL-EAAEDLARLELRALLEERFAAALGDAVERELRE--NLEERIDALR 779
|
....*
gi 499039972 1196 RAADR 1200
Cdd:COG4913 780 ARLNR 784
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
115-577 |
3.00e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 48.61 E-value: 3.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 115 EQIRQLEAELEAQAKELKAAELRaeccqeaaahsdivVATLTEELSTLREELEKKTALGKR--AEQQRNQALENAEKLKE 192
Cdd:COG4717 88 EEYAELQEELEELEEELEELEAE--------------LEELREELEKLEKLLQLLPLYQELeaLEAELAELPERLEELEE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 193 AFKDYKATIsiklkrvmesenklkgsliecdREKEELEMKCTELERQKAEHRQTISQLTE-EVKQFKAAAARLQAQIEEA 271
Cdd:COG4717 154 RLEELRELE----------------------EELEELEAELAELQEELEELLEQLSLATEeELQDLAEELEELQQRLAEL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 272 GHKASHLERQLMErgaecrdvasLRRELEDLRAVTHSQEQKvaQSQKEAQLSQTELAGLEAILSLLHLREGTLGQICASP 351
Cdd:COG4717 212 EEELEEAQEELEE----------LEEELEQLENELEAAALE--ERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 352 CMLPPVDYTGAAHLMKLKPGEGyQQLTRVLQSKEAERLKQSNL------------------------IERLQDRLSRAQE 407
Cdd:COG4717 280 FLVLGLLALLFLLLAREKASLG-KEAEELQALPALEELEEEELeellaalglppdlspeellelldrIEELQELLREAEE 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 408 EISSL--QSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQEKTSAY--SLAALKNTELETQLQEkt 483
Cdd:COG4717 359 LEEELqlEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELeeLLEALDEEELEEELEE-- 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 484 ssvqhyqslLTKKQREYQQSLEKWQQshshQFTEQQQRIQMLQLS--LEEVQPRVAEMEQELSSLQRERDEAQRTALLLQ 561
Cdd:COG4717 437 ---------LEEELEELEEELEELRE----ELAELEAELEQLEEDgeLAELLQELEELKAELRELAEEWAALKLALELLE 503
|
490
....*....|....*.
gi 499039972 562 NSLDQLTQEKQVEVRQ 577
Cdd:COG4717 504 EAREEYREERLPPVLE 519
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
385-606 |
3.18e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.90 E-value: 3.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 385 EAERLKQSNLIERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQEKTSA 464
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 465 YSLAALKNTELETQLQ-----------EKTSSVQHYQSLLTKKQREYQQSLEKWQQSHSHQFTEQQQRIQMLQLSLEEVQ 533
Cdd:COG3883 95 LYRSGGSVSYLDVLLGsesfsdfldrlSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELE 174
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 499039972 534 PRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQEKQVEVRQNEEFLQSFKEQAARSAAKVCELQSSLSAC 606
Cdd:COG3883 175 AQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAA 247
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
374-854 |
3.60e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 48.36 E-value: 3.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 374 YQQLTRVLQSKEAERLKQSNLIERLQDRLSRAqeeISSLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAA 453
Cdd:PRK01156 254 YESEIKTAESDLSMELEKNNYYKELEERHMKI---INDPVYKNRNYINDYFKYKNDIENKKQILSNIDAEINKYHAIIKK 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 454 LEkQLQEKTSAYSLAALKNTELETQLQEKTSSVQHYQSLL------TKKQREYQQSLEKWQQSHSHQFTEQQQRIQMLQL 527
Cdd:PRK01156 331 LS-VLQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLksieslKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKK 409
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 528 SLEEVQPRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQEKQVEV-------RQNEEFLQSFKEQAARSAAKVCELQ 600
Cdd:PRK01156 410 ELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCPVcgttlgeEKSNHIINHYNEKKSRLEEKIREIE 489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 601 SSLSAC------RKEMNSYL--QQIEEMKKNY------ETELERNKEKVSSLQEKlhsTTLVCQRSSEENLQLQLSLQQQ 666
Cdd:PRK01156 490 IEVKDIdekivdLKKRKEYLesEEINKSINEYnkiesaRADLEDIKIKINELKDK---HDKYEEIKNRYKSLKLEDLDSK 566
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 667 QTMLTESSARVS--ELEESQSQLHRqvsgLEQQLERARVSLQEELSKRQEDNQVKEKKLREINQQnERLSESVRHLTLEV 744
Cdd:PRK01156 567 RTSWLNALAVISliDIETNRSRSNE----IKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENE-ANNLNNKYNEIQEN 641
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 745 KKCREELVSKeseLERLRKDVgvktSQISCMEESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMV 824
Cdd:PRK01156 642 KILIEKLRGK---IDNYKKQI----AEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINEL 714
|
490 500 510
....*....|....*....|....*....|
gi 499039972 825 QNEFADTLTQLQELKDVLQKTQKVSDERQA 854
Cdd:PRK01156 715 SDRINDINETLESMKKIKKAIGDLKRLREA 744
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
115-598 |
3.68e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 48.52 E-value: 3.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 115 EQIRQLEA---ELEAQAKELKAAELRAECCQEAAAHSD---IVVATLTEELSTLREELEKKTALGKRAEQQRNQALENAE 188
Cdd:PRK03918 266 ERIEELKKeieELEEKVKELKELKEKAEEYIKLSEFYEeylDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKK 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 189 KLKEAFKDY-----KATISIKLKRVMESENKLKGSLieCDREKEELEMKCTELERQKAEHRQTISQLTEEVKQFKAAAAR 263
Cdd:PRK03918 346 KLKELEKRLeeleeRHELYEEAKAKKEELERLKKRL--TGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKE 423
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 264 LQAQIEE---AGHKASHLERQLMERGAEcRDVASLRRELEDLRAVTHSQEQKVAQSQKEAQLSQTELAGLEAILSLLHLR 340
Cdd:PRK03918 424 LKKAIEElkkAKGKCPVCGRELTEEHRK-ELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELA 502
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 341 EgtlgQIcaspcmlppvdytgaahlmklkpgegyQQLTRVLQSKEAERLKQSN-LIERLQDRLSRAQEEISSLQSSmAQR 419
Cdd:PRK03918 503 E----QL---------------------------KELEEKLKKYNLEELEKKAeEYEKLKEKLIKLKGEIKSLKKE-LEK 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 420 ASHYQSLHTELLDKLKQATDTEKELKKKKAR-----VAALEKQLQEKTSAYS-LAALKNTELETQ--------LQEKTSS 485
Cdd:PRK03918 551 LEELKKKLAELEKKLDELEEELAELLKELEElgfesVEELEERLKELEPFYNeYLELKDAEKELEreekelkkLEEELDK 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 486 VQHYQSLLTKKQREYQQSLEKWQQSHSHqftEQQQRIQMLQLSLEEvqpRVAEMEQELSSLQRERDEAQRTALLLQNSLD 565
Cdd:PRK03918 631 AFEELAETEKRLEELRKELEELEKKYSE---EEYEELREEYLELSR---ELAGLRAELEELEKRREEIKKTLEKLKEELE 704
|
490 500 510
....*....|....*....|....*....|....*.
gi 499039972 566 QLtQEKQVEVRQNE---EFLQSFKEQAARSAAKVCE 598
Cdd:PRK03918 705 ER-EKAKKELEKLEkalERVEELREKVKKYKALLKE 739
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
111-285 |
3.86e-05 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 47.85 E-value: 3.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 111 VVMSEQIRQLEAELEAQAKE-LKAAELRAEccqeaaAHSDIVVATLTEELSTLREELEKKTalgkraeQQRNQALENAEK 189
Cdd:PRK12704 23 FVRKKIAEAKIKEAEEEAKRiLEEAKKEAE------AIKKEALLEAKEEIHKLRNEFEKEL-------RERRNELQKLEK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 190 lkeAFKDYKATISIKLKRVMESENKLKGSLIECDREKEELEMKCTELERQKAEHRQT---ISQLTEEvkqfKAAAARLQA 266
Cdd:PRK12704 90 ---RLLQKEENLDRKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQElerISGLTAE----EAKEILLEK 162
|
170
....*....|....*....
gi 499039972 267 QIEEAGHKASHLERQLMER 285
Cdd:PRK12704 163 VEEEARHEAAVLIKEIEEE 181
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
115-320 |
4.04e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.84 E-value: 4.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 115 EQIRQLEAELEAQAKELKAAELRAECCQEAAAHSDIVVATLTEELSTLREELEKKTALGKRAEQQRNQALENAEKLKEAF 194
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEEL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 195 KD-----YKATISIKLKRVMESENKLK--------GSLIECDREK-EELEMKCTELERQKAEHRQTISQLTEEVKQFKAA 260
Cdd:COG4942 107 AEllralYRLGRQPPLALLLSPEDFLDavrrlqylKYLAPARREQaEELRADLAELAALRAELEAERAELEALLAELEEE 186
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 261 AARLQAQIEEAGHKASHLERQLMERGAEcrdVASLRRELEDLRAVTHSQEQKVAQSQKEA 320
Cdd:COG4942 187 RAALEALKAERQKLLARLEKELAELAAE---LAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
719-1094 |
4.38e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 48.09 E-value: 4.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 719 KEKKLREINQQNERLSESVRHLTLEVKKCREELVSKESELERLRkdvgvktSQISCMEESLQHIKSqLISKNDivmDLEK 798
Cdd:TIGR04523 150 KEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIK-------NKLLKLELLLSNLKK-KIQKNK---SLES 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 799 ALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHEVL 878
Cdd:TIGR04523 219 QISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEIS 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 879 DMDNA-----LRERQGELQQRAKLLGQLDVAIKEHKQ---ELERKVESLQQSLEARERELRDAQRELTDRN------MKE 944
Cdd:TIGR04523 299 DLNNQkeqdwNKELKSELKNQEKKLEEIQNQISQNNKiisQLNEQISQLKKELTNSESENSEKQRELEEKQneieklKKE 378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 945 SQELFACQQKLQKVLKELEETQGHCEGLSRELDaSKLQTKETEAQLCAVEEELtLKEARWLQSEarlqgmvtgleqelel 1024
Cdd:TIGR04523 379 NQSYKQEIKNLESQINDLESKIQNQEKLNQQKD-EQIKKLQQEKELLEKEIER-LKETIIKNNS---------------- 440
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1025 ereqhskELESLQETRGQLLKVSEQISSTmRSSQEQltvklqqsqtQLEEVSVRFDQTKAQLDQTKTELE 1094
Cdd:TIGR04523 441 -------EIKDLTNQDSVKELIIKNLDNT-RESLET----------QLKVLSRSINKIKQNLEQKQKELK 492
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
748-914 |
4.98e-05 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 47.27 E-value: 4.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 748 REELVSKESELERLrkdvgvkTSQISCMEESLQHIKSQLISKNDIVMDLEKALNRSEADRrscsqkvEILEGQLQMVQNE 827
Cdd:PRK09039 45 SREISGKDSALDRL-------NSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAER-------SRLQALLAELAGA 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 828 FADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELeERTHEVLDmdnALRERQGELQQRAKLLGQ-LDVAIK 906
Cdd:PRK09039 111 GAAAEGRAGELAQELDSEKQVSARALAQVELLNQQIAALRRQL-AALEAALD---ASEKRDRESQAKIADLGRrLNVALA 186
|
....*...
gi 499039972 907 EHKQELER 914
Cdd:PRK09039 187 QRVQELNR 194
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
114-720 |
5.77e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.83 E-value: 5.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 114 SEQIRQLEAELEAQAKELKAAELRAECCQEAAahsdivvatlTEELSTLREELEKKTALGKRAEQQRNQALENAEKLKEA 193
Cdd:PTZ00121 1317 ADEAKKKAEEAKKKADAAKKKAEEAKKAAEAA----------KAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKK 1386
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 194 FKDYKATISIKLKrvmESENKLKGSLIecdREKEELEMKCTELeRQKAEHRQTISQLTEEVKQfKAAAARLQAQIEEAgH 273
Cdd:PTZ00121 1387 AEEKKKADEAKKK---AEEDKKKADEL---KKAAAAKKKADEA-KKKAEEKKKADEAKKKAEE-AKKADEAKKKAEEA-K 1457
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 274 KASHLERQLME--RGAECRDVASLRRELEDLRAVTHSQEQKVAQSQK--EAQLSQTELAGLEAILSLLHLREGTlgqica 349
Cdd:PTZ00121 1458 KAEEAKKKAEEakKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKaaEAKKKADEAKKAEEAKKADEAKKAE------ 1531
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 350 spcmlppvDYTGAAHLMKLKPGEGYQQLTRVLQSKEAERLKQSNLIERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTE 429
Cdd:PTZ00121 1532 --------EAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEE 1603
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 430 lldklKQATDTEKELKKKKARVAALEKQLQEKTSAYSLAALKNTELETQLQEKTSSVQHYQSLltKKQREYQQSLEKWQQ 509
Cdd:PTZ00121 1604 -----EKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKI--KAAEEAKKAEEDKKK 1676
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 510 SHSHQFTEQQQRIQMLQLSLEEVQPR-VAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQEKQVEVRQNEEfLQSFKEQ 588
Cdd:PTZ00121 1677 AEEAKKAEEDEKKAAEALKKEAEEAKkAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEE-AKKDEEE 1755
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 589 AARSAAKVCELQSSLSACRKEMNSYLQQ-IEEMKKNYETELERN----KEKVSSLQEKLHSTTLVCQRSSEENLQLQLSL 663
Cdd:PTZ00121 1756 KKKIAHLKKEEEKKAEEIRKEKEAVIEEeLDEEDEKRRMEVDKKikdiFDNFANIIEGGKEGNLVINDSKEMEDSAIKEV 1835
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*..
gi 499039972 664 QQQQTMLTESSARVSELEESQSQLHRQVSGLEQQLERARVSLQEELSKRQEDNQVKE 720
Cdd:PTZ00121 1836 ADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEK 1892
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
381-749 |
6.53e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 47.71 E-value: 6.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 381 LQSKEAERLKQSNLIERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQe 460
Cdd:TIGR04523 316 LKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQIN- 394
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 461 ktsayslaalkntELETQLQEKTSSVQHYQSLLTKKQREYQQsLEKWQQSHSHQFTEQQQRIQML-------QLSLEEVQ 533
Cdd:TIGR04523 395 -------------DLESKIQNQEKLNQQKDEQIKKLQQEKEL-LEKEIERLKETIIKNNSEIKDLtnqdsvkELIIKNLD 460
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 534 PRVAEMEQELSSLQRErdeaqrtalllQNSLDQLTQEKQVEVRQNEEFLQSFKEQAARSAAKVCELQSSLSacrkEMNSY 613
Cdd:TIGR04523 461 NTRESLETQLKVLSRS-----------INKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKIS----SLKEK 525
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 614 LQQIEEMKKNYETELERNKEKVSSLQEKLHSTTL--VCQRSSEENLQLQLSLQQQQTMLTESSARVSELEESQSQLHRQV 691
Cdd:TIGR04523 526 IEKLESEKKEKESKISDLEDELNKDDFELKKENLekEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEI 605
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 499039972 692 SGLEQQLErarvSLQEELSKRQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKCRE 749
Cdd:TIGR04523 606 EEKEKKIS----SLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRN 659
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
116-270 |
6.61e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 46.07 E-value: 6.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 116 QIRQLEAELEAQAKELKAAELRAECCQEAAAHSDIVVATLTEELSTLREELEKKTALGKRAEQQRNQA-----LENAEKL 190
Cdd:COG1579 18 ELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVrnnkeYEALQKE 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 191 KEAFKDYKATISIKLKRVMESENKLKGSLIECDREKEELEmkcTELERQKAEHRQTISQLTEEVKQFKAAAARLQAQIEE 270
Cdd:COG1579 98 IESLKRRISDLEDEILELMERIEELEEELAELEAELAELE---AELEEKKAELDEELAELEAELEELEAEREELAAKIPP 174
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
541-763 |
6.86e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 6.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 541 QELSSLQRERDEAQRTALLLQNSLDQLTQEKQVEVRQneefLQSFKEQAARSAAKVCELQSSLSACRKEMNSYLQQIEEM 620
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQ----LAALERRIAALARRIRALEQELAALEAELAELEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 621 KKNYETELERNKEKVSSLQEKLHSTTLVCQRSSEENLQLQLSLQQQQTMLTESSARVSELEESQSQLHRQVSGLEQQLER 700
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 499039972 701 ARVSLQEELSKRQEDNQVKEKK---LREINQQNERLSESVRHLTLEVKKCREELVSKESELERLRK 763
Cdd:COG4942 176 LEALLAELEEERAALEALKAERqklLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
383-1199 |
7.31e-05 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 47.64 E-value: 7.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 383 SKEAERLKQSNLIERLQDRLSRAQEEISSLQSSMAQRASHYQSLhTELLDKLKQATDTEKELKKKKARVAALEKQLQEKT 462
Cdd:PRK04863 290 ELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAA-SDHLNLVQTALRQQEKIERYQADLEELEERLEEQN 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 463 SAYSLAALKNTELETQLQEKTSSVQHYQSLLTkkqrEYQQSLEKwQQSHSHQFteqQQRIQMLQ----------LSLEEV 532
Cdd:PRK04863 369 EVVEEADEQQEENEARAEAAEEEVDELKSQLA----DYQQALDV-QQTRAIQY---QQAVQALErakqlcglpdLTADNA 440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 533 QPRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQEKQVevrqneefLQSFKEQAARSAAKvcelQSSLSACRK-EMN 611
Cdd:PRK04863 441 EDWLEEFQAKEQEATEELLSLEQKLSVAQAAHSQFEQAYQL--------VRKIAGEVSRSEAW----DVARELLRRlREQ 508
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 612 SYLQQIEEMKKNYETELERNKEKVSSLQEKLHSTTLVCQRSSEENLQLQLSLQQQQTMLTESSARVSELEESQSQLHRQV 691
Cdd:PRK04863 509 RHLAEQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERRMALRQQL 588
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 692 SGLEQQLER------ARVSLQEELSKRQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKCREELVSKESELERLrkdv 765
Cdd:PRK04863 589 EQLQARIQRlaarapAWLAAQDALARLREQSGEEFEDSQDVTEYMQQLLERERELTVERDELAARKQALDEEIERL---- 664
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 766 gvktSQISCME-ESLQHIKSQL-----------ISKND---------------IVMDLEKAlNRSEADRRSCSQKVEILE 818
Cdd:PRK04863 665 ----SQPGGSEdPRLNALAERFggvllseiyddVSLEDapyfsalygparhaiVVPDLSDA-AEQLAGLEDCPEDLYLIE 739
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 819 GQLQmvqnEFADTLTQLQEL-KDVLQKTqkvsDERQ--------------ASVEKLTVQLREtQRELEERTHEVLDMDNA 883
Cdd:PRK04863 740 GDPD----SFDDSVFSVEELeKAVVVKI----ADRQwrysrfpevplfgrAAREKRIEQLRA-EREELAERYATLSFDVQ 810
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 884 LRERQgeLQQRAKLLGQ-LDVAIKEHKqelerkveslQQSLEARERELRDAQRELTDRNMKESqelfacQQKLQkvLKEL 962
Cdd:PRK04863 811 KLQRL--HQAFSRFIGShLAVAFEADP----------EAELRQLNRRRVELERALADHESQEQ------QQRSQ--LEQA 870
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 963 EEtqgHCEGLSRELDASKLQTKETEAQ-LCAVEEELtlkeARWLQSEARLQgmvtgleqelelereQHSKELESLqetrg 1041
Cdd:PRK04863 871 KE---GLSALNRLLPRLNLLADETLADrVEEIREQL----DEAEEAKRFVQ---------------QHGNALAQL----- 923
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1042 qllkvsEQISSTMRSSQEQltvklqqsqtqleevsvrFDQTKAQLDQTKTELEHAWKRATHLqSQLDQSQTqHLqsqtQL 1121
Cdd:PRK04863 924 ------EPIVSVLQSDPEQ------------------FEQLKQDYQQAQQTQRDAKQQAFAL-TEVVQRRA-HF----SY 973
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 499039972 1122 EQSRTLYEQTRAQNSRLQAQLEHLTAVLNQTRVEAAQLQSQlHASEKSVETSSDSLL-IKESEVARLQARISSLGRAAD 1199
Cdd:PRK04863 974 EDAAEMLAKNSDLNEKLRQRLEQAEQERTRAREQLRQAQAQ-LAQYNQVLASLKSSYdAKRQMLQELKQELQDLGVPAD 1051
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
235-471 |
7.68e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.68 E-value: 7.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 235 ELERQKAEHRQTISQLTEEVKQFKAAAARLQAQIEEAGHKASHLERQLmergaecrdvASLRRELEDLravthsqEQKVA 314
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRI----------RALEQELAAL-------EAELA 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 315 QSQKEAQLSQTELAGLEAILSLLHLREGTLGQICASPCMLPPVDYTGAAHLMKL------KPGEGYQQLTRVLQSKEAER 388
Cdd:COG4942 87 ELEKEIAELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYlkylapARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 389 LKQSNLIERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQ---EKTSAY 465
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAaaaERTPAA 246
|
....*.
gi 499039972 466 SLAALK 471
Cdd:COG4942 247 GFAALK 252
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
707-1195 |
9.15e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 47.09 E-value: 9.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 707 EELSKRQEDNQVKEKKLREINQQNERLSESVRHLT----------LEVKKCREELVSKESELERLRKDVgvkTSQISCME 776
Cdd:pfam01576 12 EELQKVKERQQKAESELKELEKKHQQLCEEKNALQeqlqaetelcAEAEEMRARLAARKQELEEILHEL---ESRLEEEE 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 777 ESLQHIKSQLISKNDIVMDLEKALNRSEADRrscsQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASV 856
Cdd:pfam01576 89 ERSQQLQNEKKKMQQHIQDLEEQLDEEEAAR----QKLQLEKVTTEAKIKKLEEDILLLEDQNSKLSKERKLLEERISEF 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 857 EKLTVQLRETQRELEERTHE----VLDMDNALRERQGELQQRAKLLGQLD---VAIKEHKQELERKVESLQQSLEARERE 929
Cdd:pfam01576 165 TSNLAEEEEKAKSLSKLKNKheamISDLEERLKKEEKGRQELEKAKRKLEgesTDLQEQIAELQAQIAELRAQLAKKEEE 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 930 LRDAQRELTDRNMKESQelfacqqklqkVLKELEETQGHCEGLSRELDASKLQTKETEAQLCAVEEELtlkEARWLQSEA 1009
Cdd:pfam01576 245 LQAALARLEEETAQKNN-----------ALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEEL---EALKTELED 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1010 RLQGMVTgleqelelereqhSKELESLQETRGQLLKvsEQISSTMRSSQEQLTVKLQQSQTQLEEVSVRFDQTK---AQL 1086
Cdd:pfam01576 311 TLDTTAA-------------QQELRSKREQEVTELK--KALEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKrnkANL 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1087 DQTKTELEhawkrathlqsqldqSQTQHLQSQTQ-LEQSRTLYEQTRaqnSRLQAQLEHLTAVLNQTRVEAAQLQSQLHA 1165
Cdd:pfam01576 376 EKAKQALE---------------SENAELQAELRtLQQAKQDSEHKR---KKLEGQLQELQARLSESERQRAELAEKLSK 437
|
490 500 510
....*....|....*....|....*....|
gi 499039972 1166 SEKSVETSSDSLLIKESEVARLQARISSLG 1195
Cdd:pfam01576 438 LQSELESVSSLLNEAEGKNIKLSKDVSSLE 467
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
721-936 |
9.88e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 9.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 721 KKLREINQQNERLSESVRHLTLEVKKCREELVSKESELERLRKDVGVKTSQISCMEESLQHIKSQLISKNDIVMDLEKAL 800
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 801 NRSE---ADRRSCSQKVEILEG-QLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHE 876
Cdd:COG4942 100 EAQKeelAELLRALYRLGRQPPlALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 499039972 877 VLDMDNALRERQGELQQRAKLLGQLDVAIKEHKQE---LERKVESLQQSLEARERELRDAQRE 936
Cdd:COG4942 180 LAELEEERAALEALKAERQKLLARLEKELAELAAElaeLQQEAEELEALIARLEAEAAAAAER 242
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
384-873 |
1.06e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.68 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 384 KEAERL--KQSNLIERLQDRLSRAQEEISSLQSSMAQrashYQSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQEK 461
Cdd:COG4717 53 KEADELfkPQGRKPELNLKELKELEEELKEAEEKEEE----YAELQEELEELEEELEELEAELEELREELEKLEKLLQLL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 462 TSAYSLAALKN--TELETQLQEKTSSVQHYQSL------LTKKQREYQQSLEKWQQSHShqfTEQQQRIQMLQLSLEEVQ 533
Cdd:COG4717 129 PLYQELEALEAelAELPERLEELEERLEELRELeeeleeLEAELAELQEELEELLEQLS---LATEEELQDLAEELEELQ 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 534 PRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQEKQVEvrqneeflqsFKEQAARSAAKVCELQS---SLSACRKEM 610
Cdd:COG4717 206 QRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLK----------EARLLLLIAAALLALLGlggSLLSLILTI 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 611 NSYLQQIEEMKKNYETELERNKEKVSSLQEKLHSTTLVCQRSSEENLQLQLSLQQQQTMLTESSARVSELEESQSQLHRQ 690
Cdd:COG4717 276 AGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLRE 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 691 VSGLEQQLERARvsLQEELSKRQEDNQVK-EKKLREINQQNERLSEsvrhLTLEVKKCREELVSKESELERLRKDVGVKT 769
Cdd:COG4717 356 AEELEEELQLEE--LEQEIAALLAEAGVEdEEELRAALEQAEEYQE----LKEELEELEEQLEELLGELEELLEALDEEE 429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 770 sqiscMEESLQHIKSQLIskndivmDLEKALNRSEADRRSCSQKVEILEGqlqmvQNEFADTLTQLQELKDVLQKTQkvs 849
Cdd:COG4717 430 -----LEEELEELEEELE-------ELEEELEELREELAELEAELEQLEE-----DGELAELLQELEELKAELRELA--- 489
|
490 500
....*....|....*....|....
gi 499039972 850 dERQASVEKLTVQLRETQRELEER 873
Cdd:COG4717 490 -EEWAALKLALELLEEAREEYREE 512
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
439-945 |
1.09e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 46.82 E-value: 1.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 439 DTEKELKKKKARVAALEKQLQEKTSAYSLAALKNTELETQLQEKTSSVQHYQSLLTKkqreyQQSLEKWQQSHSHQFTEQ 518
Cdd:PRK01156 187 YLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNE-----LSSLEDMKNRYESEIKTA 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 519 QQRIQMlqlsLEEVQPRVAEMEQELSSLQRERDEAQRTALL----LQNSLDQLTQ---------EKQVEVRQNEEFLQSF 585
Cdd:PRK01156 262 ESDLSM----ELEKNNYYKELEERHMKIINDPVYKNRNYINdyfkYKNDIENKKQilsnidaeiNKYHAIIKKLSVLQKD 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 586 KEQAARSAAKVCELQSSLSACRK---EMNSYLQQIEEMKKNYETELERNKEKVSSLQEKLHSTTLVCQRSSEENLQLQLS 662
Cdd:PRK01156 338 YNDYIKKKSRYDDLNNQILELEGyemDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNEINVK 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 663 LQQQQTMLTESSARVSELEESQSQLHRQVSGLEQQ--LERARVSLQEELSKRQednqvkekkLREINQQNERLSESVRHL 740
Cdd:PRK01156 418 LQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQsvCPVCGTTLGEEKSNHI---------INHYNEKKSRLEEKIREI 488
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 741 TLEVKKCREELVSKESELERL-RKDVGVKTSQISCMEESLQHIKSQLISKNDIVmdlEKALNRSEADRRSCSQKVEILEG 819
Cdd:PRK01156 489 EIEVKDIDEKIVDLKKRKEYLeSEEINKSINEYNKIESARADLEDIKIKINELK---DKHDKYEEIKNRYKSLKLEDLDS 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 820 Q---------------LQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHEVLDMDNAL 884
Cdd:PRK01156 566 KrtswlnalavislidIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQENKILI 645
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 499039972 885 RERQGELQQRAKLLGQLDvAIKEHKQELERKVESLQQSLEARERELRDAqreLTDRNMKES 945
Cdd:PRK01156 646 EKLRGKIDNYKKQIAEID-SIIPDLKEITSRINDIEDNLKKSRKALDDA---KANRARLES 702
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
888-1163 |
1.36e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 46.04 E-value: 1.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 888 QGELQQRAKLLgQLDVAIKEHKQELERKVESLQQSLEARERELRDAQRELtdrnmkeSQELFACQQKLQKVLKELEETQG 967
Cdd:pfam07888 37 EECLQERAELL-QAQEAANRQREKEKERYKRDREQWERQRRELESRVAEL-------KEELRQSREKHEELEEKYKELSA 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 968 HCEGLSRELDASKLQTKETEAQLCAVEEELTLKEARWLQSEARLQGMvtgleqelelereqhskelESLQETRGQLLKVS 1047
Cdd:pfam07888 109 SSEELSEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETELERM-------------------KERAKKAGAQRKEE 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1048 EqisstmrSSQEQLTVKLQQSQTQLEEVSVRFDQTKAQLDQTKTELEHAWKRATHLQSQLDQSQTQHLQSQTQLEQSRTL 1127
Cdd:pfam07888 170 E-------AERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAENEALLEELRSL 242
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 499039972 1128 YEQT----------RAQNSRLQAQLEHLTAVLNQTRVEAAQLQSQL 1163
Cdd:pfam07888 243 QERLnaserkveglGEELSSMAAQRDRTQAELHQARLQAAQLTLQL 288
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
802-1199 |
1.53e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 46.48 E-value: 1.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 802 RSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVS----DERQASVEKLT-VQLRETQRE-LEERTH 875
Cdd:COG3096 275 RHANERRELSERALELRRELFGARRQLAEEQYRLVEMARELEELSAREsdleQDYQAASDHLNlVQTALRQQEkIERYQE 354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 876 EVLDMDNALRERQGELQQRAkllgqldvaikEHKQELERKVESLQQSLEARERELRDAQRELtdrnmkESQELFACQqkL 955
Cdd:COG3096 355 DLEELTERLEEQEEVVEEAA-----------EQLAEAEARLEAAEEEVDSLKSQLADYQQAL------DVQQTRAIQ--Y 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 956 QKVLKELEETQGHC-------EGLSRELDASKLQTKETEAQLCAVEEELTLKEARWLQSEARLQGMVtgLEQELELEREQ 1028
Cdd:COG3096 416 QQAVQALEKARALCglpdltpENAEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVC--KIAGEVERSQA 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1029 HSKELESLQETRGQ--LLKVSEQISSTMrSSQEQLTVKLQQSQTQLEEVSVRFDQTKAQLDQTKTELEHAWKRATHLQSQ 1106
Cdd:COG3096 494 WQTARELLRRYRSQqaLAQRLQQLRAQL-AELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQ 572
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1107 LDQSQTQHLQSQTQLEQSRTLYEQTRAQNSR---LQAQLEHLTAVLNQTRVEAAQLQS---QLHASEKSVETSSDSLLIK 1180
Cdd:COG3096 573 AAEAVEQRSELRQQLEQLRARIKELAARAPAwlaAQDALERLREQSGEALADSQEVTAamqQLLEREREATVERDELAAR 652
|
410
....*....|....*....
gi 499039972 1181 ESEVARLQARISSLGRAAD 1199
Cdd:COG3096 653 KQALESQIERLSQPGGAED 671
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
434-596 |
1.64e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 45.92 E-value: 1.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 434 LKQATDTEKELKKKKARVAALEKQLQEKtsayslaalkntelETQLQEKtssvqhyQSLLTKKQREyqqsLEKWQQSHSH 513
Cdd:PRK12704 67 HKLRNEFEKELRERRNELQKLEKRLLQK--------------EENLDRK-------LELLEKREEE----LEKKEKELEQ 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 514 QFTEQQQRIqmlqlslEEVQPRVAEMEQEL---SSLQRErdEAQrtALLLQNSLDQLTQEKQVEVRQNEEflqSFKEQAA 590
Cdd:PRK12704 122 KQQELEKKE-------EELEELIEEQLQELeriSGLTAE--EAK--EILLEKVEEEARHEAAVLIKEIEE---EAKEEAD 187
|
....*.
gi 499039972 591 RSAAKV 596
Cdd:PRK12704 188 KKAKEI 193
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
822-1163 |
1.73e-04 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 46.04 E-value: 1.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 822 QMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHEVLDMDNALRERQGELQQRAKLLGQL 901
Cdd:pfam07888 30 ELLQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSAS 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 902 DVAIKEHKQELERKveslQQSLEARERELRDAQRELTDRNMKESQELFACQQKLQKVLKELEETQGHCEGLSRELDAskl 981
Cdd:pfam07888 110 SEELSEEKDALLAQ----RAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQ--- 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 982 qtkeTEAQLCAVEEELTLKEARWLQSEARLQGMVTGLEQELELEREQHSKELESlqetrgqllkvsEQISSTMRSSQEQL 1061
Cdd:pfam07888 183 ----TEEELRSLSKEFQELRNSLAQRDTQVLQLQDTITTLTQKLTTAHRKEAEN------------EALLEELRSLQERL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1062 TVKLQQSQTQLEEVSVrfdqTKAQLDQTKTELEHAWKRATHLQSQLDQSQTQHLQSQTQLEQSRTLYEQT----RAQNSR 1137
Cdd:pfam07888 247 NASERKVEGLGEELSS----MAAQRDRTQAELHQARLQAAQLTLQLADASLALREGRARWAQERETLQQSaeadKDRIEK 322
|
330 340
....*....|....*....|....*.
gi 499039972 1138 LQAQLEHLTAVLNQTRVEAAQLQSQL 1163
Cdd:pfam07888 323 LSAELQRLEERLQEERMEREKLEVEL 348
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
530-855 |
1.73e-04 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 46.10 E-value: 1.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 530 EEVQPRVAEMEQELSSLQRERDEaqrtallLQNSLDQLTQEKQVEVRQNEEFLQSFKEQAARSAAKVCELQSSLSACRKE 609
Cdd:COG5185 232 EEALKGFQDPESELEDLAQTSDK-------LEKLVEQNTDLRLEKLGENAESSKRLNENANNLIKQFENTKEKIAEYTKS 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 610 --MNSYLQQIEEMKK--NYETELERNKEKVSSLQEKLHSTTLVCQRSSEENLQLQLSLQQQQTMLTESSARVSELEESQS 685
Cdd:COG5185 305 idIKKATESLEEQLAaaEAEQELEESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEVELSKSSEELDSFKD 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 686 QLHRQVSGLEQQLerarvslQEELSKRQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKCREELVSKESELERLRKDV 765
Cdd:COG5185 385 TIESTKESLDEIP-------QNQRGYAQEILATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREA 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 766 GVKTSqiSCMEESLQHIKSQLISKNDivmDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKT 845
Cdd:COG5185 458 DEESQ--SRLEEAYDEINRSVRSKKE---DLNEELTQIESRVSTLKATLEKLRAKLERQLEGVRSKLDQVAESLKDFMRA 532
|
330
....*....|
gi 499039972 846 QKVSDERQAS 855
Cdd:COG5185 533 RGYAHILALE 542
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
696-950 |
1.84e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.06 E-value: 1.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 696 QQLERARVSLQEELSKRQEDNQVKEKKLREINQQNERLSESVRHL--TLEVKKCREELVSKESELERLRKDvgvktsqis 773
Cdd:COG4913 613 AALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSwdEIDVASAEREIAELEAELERLDAS--------- 683
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 774 cmeeslqhiksqliskNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQktQKVSDERQ 853
Cdd:COG4913 684 ----------------SDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLE--AAEDLARL 745
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 854 ASVEKLTVQLRE-TQRELEERTHEVLDmdnalRERQGELQQRAKLLGQLDVAIKEHKQELERKVESLQQSLEARErELRD 932
Cdd:COG4913 746 ELRALLEERFAAaLGDAVERELRENLE-----ERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLP-EYLA 819
|
250
....*....|....*...
gi 499039972 933 AQRELTDRNMKESQELFA 950
Cdd:COG4913 820 LLDRLEEDGLPEYEERFK 837
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
716-977 |
2.09e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.78 E-value: 2.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 716 NQVKEKKLREINQQNERLSESVRHLTLEVKkcreelvSKESELERLRKDVGVKTSQISCMEESL----QHIKSQLISKND 791
Cdd:PHA02562 169 DKLNKDKIRELNQQIQTLDMKIDHIQQQIK-------TYNKNIEEQRKKNGENIARKQNKYDELveeaKTIKAEIEELTD 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 792 IVMDLEKalnrSEADRRSCSQKVEILEGQLQMvqnefadTLTQLQELKDVLQK-------TQKVSDErQASVEKLTVQLR 864
Cdd:PHA02562 242 ELLNLVM----DIEDPSAALNKLNTAAAKIKS-------KIEQFQKVIKMYEKggvcptcTQQISEG-PDRITKIKDKLK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 865 ETQRELEErthevldmdnaLRERQGELQQRAKLLGQLDVAIkehkQELERKVESLQQSLEARERELRDAQRE---LTDRN 941
Cdd:PHA02562 310 ELQHSLEK-----------LDTAIDELEEIMDEFNEQSKKL----LELKNKISTNKQSLITLVDKAKKVKAAieeLQAEF 374
|
250 260 270
....*....|....*....|....*....|....*.
gi 499039972 942 MKESQELfacqQKLQKVLKELEETqghCEGLSRELD 977
Cdd:PHA02562 375 VDNAEEL----AKLQDELDKIVKT---KSELVKEKY 403
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
679-989 |
2.16e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 45.88 E-value: 2.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 679 ELEESQSQLHRQvsgleQQLERARVSLQEELSKRQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKcREEL---VSKE 755
Cdd:pfam17380 304 EKEEKAREVERR-----RKLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIRQEERKRELERIR-QEEIameISRM 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 756 SELERLRKDVGVKTSQIscmEESLQHIKSQLISKNDIVMDLEKALNRSEADRRscsQKVEILEGQLQMVQNEFAdtltql 835
Cdd:pfam17380 378 RELERLQMERQQKNERV---RQELEAARKVKILEEERQRKIQQQKVEMEQIRA---EQEEARQREVRRLEEERA------ 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 836 QELKDVLQKTQkvsdERQASVEKLtvqlretQRELEERTHEVLDMDNALRERQGELQQRAKLLGQLDVAIKEHKQELERK 915
Cdd:pfam17380 446 REMERVRLEEQ----ERQQQVERL-------RQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERK 514
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 499039972 916 VESLQQSLEARERELRDAQRELTDRNMKESQELFACQQKLQKVLKELEETQGHCEGLSRELDASKlQTKETEAQ 989
Cdd:pfam17380 515 RKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMEREREMMR-QIVESEKA 587
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
676-1162 |
2.30e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 45.98 E-value: 2.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 676 RVSELEESQSQLHRQVSGLeQQLERARVSLQEELSKRQEDNQVKEKKLR-EINQQNERLSESVRHLTLEVKKCREELVSK 754
Cdd:pfam12128 242 EFTKLQQEFNTLESAELRL-SHLHFGYKSDETLIASRQEERQETSAELNqLLRTLDDQWKEKRDELNGELSAADAAVAKD 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 755 ESELERLRKdvgvktsqiscmeeslQHIKSQLISKNDIVMDLEKALNRSeADRRSCSQKVEILEGQLQMVQNEFaDTLTQ 834
Cdd:pfam12128 321 RSELEALED----------------QHGAFLDADIETAAADQEQLPSWQ-SELENLEERLKALTGKHQDVTAKY-NRRRS 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 835 L--QELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHEVLDMDNA-LRERQGELQQRA-KLLGQLDVAI----- 905
Cdd:pfam12128 383 KikEQNNRDIAGIKDKLAKIREARDRQLAVAEDDLQALESELREQLEAGKLeFNEEEYRLKSRLgELKLRLNQATatpel 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 906 KEHKQELERKVESLQQSLEARERELRDAQRELTDRNMKESQELfacqQKLQKVLKELEETQGHCEGLSRELDA---SKLQ 982
Cdd:pfam12128 463 LLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQAS----EALRQASRRLEERQSALDELELQLFPqagTLLH 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 983 TKETEAQLcaveeeltlkearWLQSEARLQgmvtgleqelelereqhskeleslqeTRGQLLKVSEQISSTMRSSQEQLT 1062
Cdd:pfam12128 539 FLRKEAPD-------------WEQSIGKVI--------------------------SPELLHRTDLDPEVWDGSVGGELN 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1063 ---VKLQQSQTQLEEVSVRFDQTKAQLDQTKTELEHAWKRATHLQSQLDQSQTQHLQSQTQLEQSRTLYEQTRAQNSRLQ 1139
Cdd:pfam12128 580 lygVKLDLKRIDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLF 659
|
490 500
....*....|....*....|...
gi 499039972 1140 AQLEHLTAVLNQTRVEAAQLQSQ 1162
Cdd:pfam12128 660 DEKQSEKDKKNKALAERKDSANE 682
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
154-641 |
2.44e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 45.78 E-value: 2.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 154 TLTEELSTLREELEKKTALGKRAEQQRNQALENAEKLKEAFKDykatisiKLKRVMESENKLKgsliECDREKEELEMKC 233
Cdd:TIGR04523 229 QLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSE-------KQKELEQNNKKIK----ELEKQLNQLKSEI 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 234 TELERQKAEhrQTISQLTEEVKQFKAAAARLQAQIEEAGHKASHLERQlmergaecrdVASLRRELEDLRAVTHSQEQKV 313
Cdd:TIGR04523 298 SDLNNQKEQ--DWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQ----------ISQLKKELTNSESENSEKQREL 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 314 AQSQKEAQLSQTELAG-LEAILSLLHLREGTLGQIcaspcmlppvdytgaahlmkLKPGEGYQQLTRVLQSKEAERLKQS 392
Cdd:TIGR04523 366 EEKQNEIEKLKKENQSyKQEIKNLESQINDLESKI--------------------QNQEKLNQQKDEQIKKLQQEKELLE 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 393 NLIERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQEKTSAYSLAALKN 472
Cdd:TIGR04523 426 KEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEK 505
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 473 TELETQLQEktssvqhyqslLTKKQREYQQSLEKWqqshSHQFTEQQQRIQMLQLSLEEVQPRV--AEMEQELSSLQRER 550
Cdd:TIGR04523 506 KELEEKVKD-----------LTKKISSLKEKIEKL----ESEKKEKESKISDLEDELNKDDFELkkENLEKEIDEKNKEI 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 551 DEAQRTalllQNSLDQLTQEKQVEVRQNEEFLQSFKEQAARSAAKVCELQSSLSACRKE---MNSYLQQIEEMKKNYETE 627
Cdd:TIGR04523 571 EELKQT----QKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKEnekLSSIIKNIKSKKNKLKQE 646
|
490
....*....|....
gi 499039972 628 LERNKEKVSSLQEK 641
Cdd:TIGR04523 647 VKQIKETIKEIRNK 660
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1030-1201 |
2.78e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.68 E-value: 2.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1030 SKELESLQETRGQLLKVSEQISS-----TMRSSQEQLTVKLQQSQTQLEEVSVRFDQTKAQL-DQTKTELEHAWKRATHL 1103
Cdd:COG4913 231 VEHFDDLERAHEALEDAREQIELlepirELAERYAAARERLAELEYLRAALRLWFAQRRLELlEAELEELRAELARLEAE 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1104 QSQLDQSQTQHLQSQTQLEQSRtlYEQTRAQNSRLQAQLEHLTAVLNQTRVEAAQLQSQLHASEKSVETSSDSLLIKESE 1183
Cdd:COG4913 311 LERLEARLDALREELDELEAQI--RGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAE 388
|
170
....*....|....*...
gi 499039972 1184 VARLQARISSLGRAADRQ 1201
Cdd:COG4913 389 AAALLEALEEELEALEEA 406
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
897-1147 |
3.13e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 3.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 897 LLGQLDVAIKEHKQELERKVESLQQSLEARERELRDAQRELTdrnmKESQELFACQQKLQKVLKELEETQGHCEGLSREL 976
Cdd:COG4942 10 LLALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEK----ALLKQLAALERRIAALARRIRALEQELAALEAEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 977 DASKLQTKETEAQLCAVEEELTlKEARWLQSEARLQGMVTGLEQELELEREQHSKELESLQETRGQLLKvseqissTMRS 1056
Cdd:COG4942 86 AELEKEIAELRAELEAQKEELA-ELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAE-------ELRA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1057 SQEQLtvklQQSQTQLEEVSVRFDQTKAQLDQTKTELEHAWKRATHLQSQLDQSQTQHLQSQTQLEQSRTLYEQTRAQNS 1136
Cdd:COG4942 158 DLAEL----AALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLE 233
|
250
....*....|.
gi 499039972 1137 RLQAQLEHLTA 1147
Cdd:COG4942 234 AEAAAAAERTP 244
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
475-714 |
3.30e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.01 E-value: 3.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 475 LETQLQEKTSSVQHYQSLLTKKQREYQQSLEKWQQshshQFTEQQQRIQMLQLSLEE--VQPRVAEMEQELSSLQRERDE 552
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAEA----ALEEFRQKNGLVDLSEEAklLLQQLSELESQLAEARAELAE 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 553 AQRTALLLQNSLDQLTQEKQvEVRQNEEfLQSFKEQAARSAAKVCELQSSLSACRKEMNSYLQQIEEMKKNYETELERNK 632
Cdd:COG3206 238 AEARLAALRAQLGSGPDALP-ELLQSPV-IQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRIL 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 633 EKVSSLQEKLHSTtlvcqrsseenlqlqlsLQQQQTMLTESSARVSELEESQSQLHRqvsgLEQQLERARVSLQEELSKR 712
Cdd:COG3206 316 ASLEAELEALQAR-----------------EASLQAQLAQLEARLAELPELEAELRR----LEREVEVARELYESLLQRL 374
|
..
gi 499039972 713 QE 714
Cdd:COG3206 375 EE 376
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
496-1187 |
3.79e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 45.21 E-value: 3.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 496 KQREYQQSLEKWQQSHSHQFTEQQQRIQMLQLSLEEVQPRVAEMEqeLSSLQRERDEAQRTALLLQNSLDQLTQEKQVEV 575
Cdd:pfam12128 215 KSRLNRQQVEHWIRDIQAIAGIMKIRPEFTKLQQEFNTLESAELR--LSHLHFGYKSDETLIASRQEERQETSAELNQLL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 576 RQNEEflqSFKEQAARSAAKVCELQSSLSACRKEmnsyLQQIEEMKKNYETElerNKEKVSSLQEKLHSTTLVCqrsSEE 655
Cdd:pfam12128 293 RTLDD---QWKEKRDELNGELSAADAAVAKDRSE----LEALEDQHGAFLDA---DIETAAADQEQLPSWQSEL---ENL 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 656 NLQLQLSLQQQQTMLTESSARVSELEEsqsQLHRQVSGLEQQLERARVSLQEELSKRQEDNQVKEKKLR-EINQQNERLS 734
Cdd:pfam12128 360 EERLKALTGKHQDVTAKYNRRRSKIKE---QNNRDIAGIKDKLAKIREARDRQLAVAEDDLQALESELReQLEAGKLEFN 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 735 ESVRHLTLEVKKCREELVSKESELERLrkdvgvktSQISCMEESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCSQKV 814
Cdd:pfam12128 437 EEEYRLKSRLGELKLRLNQATATPELL--------LQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEAL 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 815 EILEGQLQMVQNEFADTLTQL------------QELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHEV----- 877
Cdd:pfam12128 509 RQASRRLEERQSALDELELQLfpqagtllhflrKEAPDWEQSIGKVISPELLHRTDLDPEVWDGSVGGELNLYGVkldlk 588
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 878 -------LDMDNALRER----------QGELQQRA-KLLGQLDVAIKEHKQELERKVESLQQSlEARERELRDAQRELTD 939
Cdd:pfam12128 589 ridvpewAASEEELRERldkaeealqsAREKQAAAeEQLVQANGELEKASREETFARTALKNA-RLDLRRLFDEKQSEKD 667
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 940 RNMKesqelfACQQKLQKVLKELEETQGHCEGLSRELDASKLQTKETeaqlcaVEEELTLKEARWLQSEARLQGMVTGLE 1019
Cdd:pfam12128 668 KKNK------ALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQ------KREARTEKQAYWQVVEGALDAQLALLK 735
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1020 QELELEREQHSKELESLQETRGQLLK---VSEQISSTMRSSQEQLTVKLQQSQTQLEEVSVRFDqtkaqldqtkteleha 1096
Cdd:pfam12128 736 AAIAARRSGAKAELKALETWYKRDLAslgVDPDVIAKLKREIRTLERKIERIAVRRQEVLRYFD---------------- 799
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1097 WKRATHLQsqldqsQTQHLQSQTqleqsrtlyEQTRAQNSRLQAQLEHLTAvlnQTRVEAAQLQSQLHASEKSVETSSDS 1176
Cdd:pfam12128 800 WYQETWLQ------RRPRLATQL---------SNIERAISELQQQLARLIA---DTKLRRAKLEMERKASEKQQVRLSEN 861
|
730
....*....|.
gi 499039972 1177 LLIKESEVARL 1187
Cdd:pfam12128 862 LRGLRCEMSKL 872
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
791-1195 |
4.30e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.95 E-value: 4.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 791 DIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKT------QKVSDERQASVEKLTVQLR 864
Cdd:PRK04863 286 EEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLVqtalrqQEKIERYQADLEELEERLE 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 865 ETQRELEERTHEVLDMDNALRERQGELQQRAKLLGQ----LDV----AIKEH--KQELERKVESLQ------QSLEARER 928
Cdd:PRK04863 366 EQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADyqqaLDVqqtrAIQYQqaVQALERAKQLCGlpdltaDNAEDWLE 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 929 ELRDAQRELTDrnmkesqELFACQQKL---QKVLKELEETQGHCEGLSRELDASklqtketEAQLCAVEEELTLKEARWL 1005
Cdd:PRK04863 446 EFQAKEQEATE-------ELLSLEQKLsvaQAAHSQFEQAYQLVRKIAGEVSRS-------EAWDVARELLRRLREQRHL 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1006 qsEARLQGMvtgleqelelerEQHSKELE---SLQETRGQLLKVSEQISSTMRSSQEQLTVKLQQSQTQLEEVSvrfdQT 1082
Cdd:PRK04863 512 --AEQLQQL------------RMRLSELEqrlRQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEARLESLS----ES 573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1083 KAQLDQTKTELEHAWKRATHLQSQLDQSQTQHLQSQTQLEQsrtLYEQTRAQNSRLQAQLEHLTAVLNQTRvEAAQLQSQ 1162
Cdd:PRK04863 574 VSEARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALAR---LREQSGEEFEDSQDVTEYMQQLLERER-ELTVERDE 649
|
410 420 430
....*....|....*....|....*....|....
gi 499039972 1163 LHASEKSVETSSDSLLIKE-SEVARLQARISSLG 1195
Cdd:PRK04863 650 LAARKQALDEEIERLSQPGgSEDPRLNALAERFG 683
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
624-1170 |
4.90e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.96 E-value: 4.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 624 YETELERNKEKVSSLQEKLHSTTLvcqRSSEENLQLQLSLQQQQTMLTESSARVSELEESQSQLHRQVSGLEQQLE--RA 701
Cdd:TIGR00618 178 YTQLALMEFAKKKSLHGKAELLTL---RSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREaqEE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 702 RVSLQEELSKRQEDNQVKEKKLREINQQNERL------------SESVRHLTLEVKKCREELVSKESELERLRKDVGVKT 769
Cdd:TIGR00618 255 QLKKQQLLKQLRARIEELRAQEAVLEETQERInrarkaaplaahIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHV 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 770 SQISCMEESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCS----------------QKVEILEGQLQMVQNEFADTLT 833
Cdd:TIGR00618 335 KQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTltqhihtlqqqkttltQKLQSLCKELDILQREQATIDT 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 834 QLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHEVLdmdnALRERQGELQQRAKLLGQLDVAikeHKQELE 913
Cdd:TIGR00618 415 RTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKI----HLQESAQSLKEREQQLQTKEQI---HLQETR 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 914 RKVESLQ--QSLEARERELRDAQRELtDRNMKESQELFACQQKLQKVLKELEETQGHCEGLSRELDASKLQTKETEAQLC 991
Cdd:TIGR00618 488 KKAVVLArlLELQEEPCPLCGSCIHP-NPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQ 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 992 AVEEELTLKEARWLQSEARLQGMVTGLEQELELEREQHSKELESLQETRGQLLKVSEQisstmrssQEQLTVKLQQSQTQ 1071
Cdd:TIGR00618 567 EIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPE--------QDLQDVRLHLQQCS 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1072 LEEVSVRFDQTKAQLDQTKTELEHAWKRATHLQSQLDQSQTQHLQSQTQLEQSRTLYEQTRAQ-NSRLQAQLEHL----- 1145
Cdd:TIGR00618 639 QELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQcQTLLRELETHIeeydr 718
|
570 580 590
....*....|....*....|....*....|....*..
gi 499039972 1146 ------------TAVLNQTRVEAAQLQSQLHASEKSV 1170
Cdd:TIGR00618 719 efneienassslGSDLAAREDALNQSLKELMHQARTV 755
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
795-964 |
5.15e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 43.37 E-value: 5.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 795 DLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRE--TQRELEE 872
Cdd:COG1579 14 ELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNvrNNKEYEA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 873 RTHEVldmdNALRERQGELQQRAKllgqldvAIKEHKQELERKVESLQQSLEARERELRDAQRELTDRNMKESQELFACQ 952
Cdd:COG1579 94 LQKEI----ESLKRRISDLEDEIL-------ELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELE 162
|
170
....*....|..
gi 499039972 953 QKLQKVLKELEE 964
Cdd:COG1579 163 AEREELAAKIPP 174
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
390-963 |
5.76e-04 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 44.36 E-value: 5.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 390 KQSNLIERLQDRLSRAQEEISSLQSSMAQRASHY--QSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQEKTSAYSL 467
Cdd:pfam07111 63 QQAELISRQLQELRRLEEEVRLLRETSLQQKMRLeaQAMELDALAVAEKAGQAEAEGLRAALAGAEMVRKNLEEGSQREL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 468 AALKNTELEtQLQEKTSSVQHYQSLLTKKQREYQQ---SLEKWQQSHSHQFTEQQQRIQMLQLSL--------------- 529
Cdd:pfam07111 143 EEIQRLHQE-QLSSLTQAHEEALSSLTSKAEGLEKslnSLETKRAGEAKQLAEAQKEAELLRKQLsktqeeleaqvtlve 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 530 -------EEVQPRVAEMEQELSS---------LQRERDEAQRTALLLQNSLDQLTQekqVEVRQNEEFLQSFKEQAARSA 593
Cdd:pfam07111 222 slrkyvgEQVPPEVHSQTWELERqelldtmqhLQEDRADLQATVELLQVRVQSLTH---MLALQEEELTRKIQPSDSLEP 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 594 AKVCELQSSLSACRKEMNSYLQQIEEMKKNYETELERNKEKVSSLQEKLHSttlvcqrSSEENLQLQLSLQQQQTML--T 671
Cdd:pfam07111 299 EFPKKCRSLLNRWREKVFALMVQLKAQDLEHRDSVKQLRGQVAELQEQVTS-------QSQEQAILQRALQDKAAEVevE 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 672 ESSARVSELEESQSQLHR-----QVSGLEQQLERARVSLQEELSKRQEDNQVKEKKLREINQQNERLSESVRHL------ 740
Cdd:pfam07111 372 RMSAKGLQMELSRAQEARrrqqqQTASAEEQLKFVVNAMSSTQIWLETTMTRVEQAVARIPSLSNRLSYAVRKVhtikgl 451
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 741 ---TLEVKKCREELVSKESELERLRKDVGVKTSQIScmEESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCSQKVEIL 817
Cdd:pfam07111 452 marKVALAQLRQESCPPPPPAPPVDADLSLELEQLR--EERNRLDAELQLSAHLIQQEVGRAREQGEAERQQLSEVAQQL 529
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 818 EGQLQMVQNEFADTltqLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHEVldmDNALRERQGELQQRakl 897
Cdd:pfam07111 530 EQELQRAQESLASV---GQQLEVARQGQQESTEEAASLRQELTQQQEIYGQALQEKVAEV---ETRLREQLSDTKRR--- 600
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 499039972 898 lgqldvaIKEHKQELERKVESLQ--QSLEARERELRDAQRELTDRNMKESqelfacQQKLQKVLKELE 963
Cdd:pfam07111 601 -------LNEARREQAKAVVSLRqiQHRATQEKERNQELRRLQDEARKEE------GQRLARRVQELE 655
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
490-708 |
7.46e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 7.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 490 QSLLTKKQREYQQSLEKWQQSHSHQFTEQQQRIQMLQLSLEEVQPRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQ 569
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 570 EKQVEVRQNEEFLQSFKEQAARSAAKVCELQSSLSACRKE---MNSYLQQIEEMKKNYETELERNKEKVSSLQEKLHSTT 646
Cdd:COG4942 98 ELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRlqyLKYLAPARREQAEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 499039972 647 LVCQRSSEENLQLQLSLQQQQTMLTESSARVSELEESQSQLHRQVSGLEQQLERARVSLQEE 708
Cdd:COG4942 178 ALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
395-894 |
8.82e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 43.88 E-value: 8.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 395 IERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQEKTSAYSLAALKNTE 474
Cdd:PRK02224 309 AEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEE 388
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 475 LETQLQEktssvqhyqslltkkqreyqqsLEKWQQSHSHQFTEQQQRIQMLQLSLEEVQPRVAEMEQELSSLQRERDEAQ 554
Cdd:PRK02224 389 LEEEIEE----------------------LRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAE 446
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 555 RtaLLLQNSLDQLTQEkqVEVRQNEEFLQSFKEQAARSAAKVCELQSSlsacRKEMNSYLQQIEEMKKNyETELERNKEK 634
Cdd:PRK02224 447 A--LLEAGKCPECGQP--VEGSPHVETIEEDRERVEELEAELEDLEEE----VEEVEERLERAEDLVEA-EDRIERLEER 517
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 635 VSSLQEklhsttlvcqrsseenlqlqlslqqqqtMLTESSARVSELEESQSQLHRQVSGLEQQLERARVSLQ---EELSK 711
Cdd:PRK02224 518 REDLEE----------------------------LIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAeaeEEAEE 569
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 712 RQEDNQVKEKKLREINQQNERLsESVRHLTLEVKKCREelvskesELERLRKdvgvKTSQISCMEESLqhiKSQLISKND 791
Cdd:PRK02224 570 AREEVAELNSKLAELKERIESL-ERIRTLLAAIADAED-------EIERLRE----KREALAELNDER---RERLAEKRE 634
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 792 IVMDLEKAL--NRSEADRRSCSQKVEILEgqlqmvqnEFADTLTQLQELKDVLQKT---QKVSDERQASVEKLTVQLRET 866
Cdd:PRK02224 635 RKRELEAEFdeARIEEAREDKERAEEYLE--------QVEEKLDELREERDDLQAEigaVENELEELEELRERREALENR 706
|
490 500
....*....|....*....|....*...
gi 499039972 867 QRELEERTHEVLDMDNALRERQGELQQR 894
Cdd:PRK02224 707 VEALEALYDEAEELESMYGDLRAELRQR 734
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
115-765 |
1.04e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.51 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 115 EQIRQLEAELEAQAKELKaaelraeccqeaaahsdivvaTLTEELSTLREELEKKTALGKRAEQQRNQaLENAEKLKEAF 194
Cdd:PRK03918 193 ELIKEKEKELEEVLREIN---------------------EISSELPELREELEKLEKEVKELEELKEE-IEELEKELESL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 195 KDYKATISIKLKRVMESENKLKgsliecdREKEELEMKCTELE--RQKAEHRQTISQLTEEVKQFKAAAARLQAQIEEag 272
Cdd:PRK03918 251 EGSKRKLEEKIRELEERIEELK-------KEIEELEEKVKELKelKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEE-- 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 273 hKASHLERQLMERGAECRDVASLRRELEDLravthsqEQKVAQSQKEAQLSQTELAGLEAILSllhlregtlgqicaspc 352
Cdd:PRK03918 322 -EINGIEERIKELEEKEERLEELKKKLKEL-------EKRLEELEERHELYEEAKAKKEELER----------------- 376
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 353 mlppvdytgaahLMKLKPGEGYQQLTRVLQSKEAERLKQSNLIERLQDRLSRAQEEISSLQSSMAQ--RASHYQSLHTEL 430
Cdd:PRK03918 377 ------------LKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEElkKAKGKCPVCGRE 444
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 431 LDKlkqatDTEKELKKK-KARVAALEKQLQEKTSAYSLAALKNTELETQLQEKTSSVQHYQslLTKKQREYQQSLEKWQQ 509
Cdd:PRK03918 445 LTE-----EHRKELLEEyTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKE--LAEQLKELEEKLKKYNL 517
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 510 SHSHQFTEQqqriqmlqlsLEEVQPRVAEMEQELSSLQRERDEAQrtalLLQNSLDQLTQEKQVEVRQNEEFLQSFKEQA 589
Cdd:PRK03918 518 EELEKKAEE----------YEKLKEKLIKLKGEIKSLKKELEKLE----ELKKKLAELEKKLDELEEELAELLKELEELG 583
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 590 ARSaakVCELQSSLSACRKEMNSYLQQieemkKNYETELERNKEKVSSLQEKLhsttlvcqrsseenlqlqlslQQQQTM 669
Cdd:PRK03918 584 FES---VEELEERLKELEPFYNEYLEL-----KDAEKELEREEKELKKLEEEL---------------------DKAFEE 634
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 670 LTESSARVSELEESQSQLHRQVSGLE-QQLERARVSLQEELSKRQEDNQVKEKKLREINQQNERLSESVRhltlEVKKCR 748
Cdd:PRK03918 635 LAETEKRLEELRKELEELEKKYSEEEyEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELE----EREKAK 710
|
650 660
....*....|....*....|
gi 499039972 749 EELVSKE---SELERLRKDV 765
Cdd:PRK03918 711 KELEKLEkalERVEELREKV 730
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
717-873 |
1.13e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.22 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 717 QVKEKKLREINQQNERLSESVRHLTLEVKKCREELVSKESELERLRKDVGVKTSQISCMEESLQHIKSQL--ISKNDIVM 794
Cdd:COG1579 13 QELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLgnVRNNKEYE 92
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 499039972 795 DLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEER 873
Cdd:COG1579 93 ALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAK 171
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
830-997 |
1.21e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.22 E-value: 1.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 830 DTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHEVLDMDNALRERQGELQQRAKLLGQLDVAIKEHK 909
Cdd:COG1579 7 RALLDLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 910 -----QELERKVESLQQSLEARERELRDAQRELTdrnmkesqelfACQQKLQKVLKELEETQGHCEGLSRELDASKLQTK 984
Cdd:COG1579 87 nnkeyEALQKEIESLKRRISDLEDEILELMERIE-----------ELEEELAELEAELAELEAELEEKKAELDEELAELE 155
|
170
....*....|...
gi 499039972 985 ETEAQLCAVEEEL 997
Cdd:COG1579 156 AELEELEAEREEL 168
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
520-763 |
1.25e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 42.59 E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 520 QRIQMLQLSLEEVQPRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQekqvEVRQNEEFLQSFKEQAARSAAKVCEL 599
Cdd:COG1340 1 SKTDELSSSLEELEEKIEELREEIEELKEKRDELNEELKELAEKRDELNA----QVKELREEAQELREKRDELNEKVKEL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 600 QSSLSACRKEMNSYLQQIEEMKKNYET------ELERNKEKVSSLQEKLHSTTL-------VCQRSS--EENLQLQLSLQ 664
Cdd:COG1340 77 KEERDELNEKLNELREELDELRKELAElnkaggSIDKLRKEIERLEWRQQTEVLspeeekeLVEKIKelEKELEKAKKAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 665 QQQTMLTESSARVSELEESQSQLHRQVSGLEQQLERARVSLQEELSKRQEDNqvkeKKLREINQQNERLSESVRHLTLEV 744
Cdd:COG1340 157 EKNEKLKELRAELKELRKEAEEIHKKIKELAEEAQELHEEMIELYKEADELR----KEADELHKEIVEAQEKADELHEEI 232
|
250
....*....|....*....
gi 499039972 745 KKCREELVSKESELERLRK 763
Cdd:COG1340 233 IELQKELRELRKELKKLRK 251
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
435-702 |
1.33e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 1.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 435 KQATDTEKELKKKKARVAALEKQLQEKTSAYSLAALKNTELETQLQEktssvqhyqslLTKKQREYQQSLEKWQQshshQ 514
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAA-----------LARRIRALEQELAALEA----E 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 515 FTEQQQRIQMLQLSLEEVQPRVAEMeqeLSSLQRERDEAQRTALLLQNSLDQLTQEKQVeVRQNEEFLQSFKEQAARSAA 594
Cdd:COG4942 85 LAELEKEIAELRAELEAQKEELAEL---LRALYRLGRQPPLALLLSPEDFLDAVRRLQY-LKYLAPARREQAEELRADLA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 595 KVCELQSSLSACRKEMNSYLQQIEEMKKnyetELERNKEKVSSLQEKLHSTtlvcqrsseenlqlqlslqqqqtmLTESS 674
Cdd:COG4942 161 ELAALRAELEAERAELEALLAELEEERA----ALEALKAERQKLLARLEKE------------------------LAELA 212
|
250 260
....*....|....*....|....*...
gi 499039972 675 ARVSELEESQSQLHRQVSGLEQQLERAR 702
Cdd:COG4942 213 AELAELQQEAEELEALIARLEAEAAAAA 240
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
216-866 |
1.35e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 43.11 E-value: 1.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 216 KGSLIECDREKEELEMKctELERQKAEHRQTISQLTEEVKQFKAAAARLQAQIEEAGHK-ASHLERQ------------L 282
Cdd:PRK02224 186 RGSLDQLKAQIEEKEEK--DLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVlEEHEERReeletleaeiedL 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 283 MERGAEC-RDVASLRRELEDLRAVTHSQEQKVAQSQKEAQLSQTELAGLEAILSLLHLREGTLGQICAspcmlppvdytg 361
Cdd:PRK02224 264 RETIAETeREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLE------------ 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 362 aahlmklkpgEGYQQLTRvlQSKEAERLKQSnlIERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATDTE 441
Cdd:PRK02224 332 ----------ECRVAAQA--HNEEAESLRED--ADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELR 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 442 KELKKKKARVAALEKQLQEKTSAYSLAALKNTELETQLQEKTSSVQHYQSLLTK-KQREYQQSLEkwQQSHSHQFTEQQQ 520
Cdd:PRK02224 398 ERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAgKCPECGQPVE--GSPHVETIEEDRE 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 521 RIQMLQLSLEEVQPRVAEMEQELSSLQRERDEAQRTALLLQN--SLDQLTQEKQVEVRQNEEFLQSFKEQAARSAAKVCE 598
Cdd:PRK02224 476 RVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERreDLEELIAERRETIEEKRERAEELRERAAELEAEAEE 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 599 LQSSLSACRKEMNSYLQQIEEMkknyETELERNKEKVSSLQEklhsttlvcqrsseenlqlqlslqqqqtmLTESSARVS 678
Cdd:PRK02224 556 KREAAAEAEEEAEEAREEVAEL----NSKLAELKERIESLER-----------------------------IRTLLAAIA 602
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 679 ELEESQSQLHRQVSGLEQQLERARVSLQEELSKRQE-DNQVKEKKLREINQQNERLSESVRHLTlevkkcrEELVSKESE 757
Cdd:PRK02224 603 DAEDEIERLREKREALAELNDERRERLAEKRERKRElEAEFDEARIEEAREDKERAEEYLEQVE-------EKLDELREE 675
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 758 LERLRKDVGVKTSQIscmeESLQHIKSQLISKNDIVMDLEKALNRSEadrrscsqkveilegqlqmvqnEFADTLTQLQe 837
Cdd:PRK02224 676 RDDLQAEIGAVENEL----EELEELRERREALENRVEALEALYDEAE----------------------ELESMYGDLR- 728
|
650 660
....*....|....*....|....*....
gi 499039972 838 lkdvlqktqkvSDERQASVEKLTVQLRET 866
Cdd:PRK02224 729 -----------AELRQRNVETLERMLNET 746
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
159-580 |
1.45e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.22 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 159 LSTLREELEKK-TALGKRAEQQRNQALENAEKLKEAFKdykatisiKLKRVMESENKLKGSLIECDREKEELEMKCTELE 237
Cdd:COG4717 44 RAMLLERLEKEaDELFKPQGRKPELNLKELKELEEELK--------EAEEKEEEYAELQEELEELEEELEELEAELEELR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 238 R---------QKAEHRQTISQLTEEVKQFKAAAARLQAQIE---EAGHKASHLERQLMERGAEC------------RDVA 293
Cdd:COG4717 116 EeleklekllQLLPLYQELEALEAELAELPERLEELEERLEelrELEEELEELEAELAELQEELeelleqlslateEELQ 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 294 SLRRELEDLRAVTHSQEQKVAQSQKEAQLSQTELAGLEAILSLLHLREgTLGQICASPCMLPPV---DYTGAAHLMKLKP 370
Cdd:COG4717 196 DLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEE-RLKEARLLLLIAAALlalLGLGGSLLSLILT 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 371 GEGYQQLTRVLQSKEAERLKQSNLIERLQDRLSRAQEEISSLQSSMAQR-ASHYQSLHTELLDKLKQATDTEKELKKKKA 449
Cdd:COG4717 275 IAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEElLAALGLPPDLSPEELLELLDRIEELQELLR 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 450 RVAALEKQLQEK---TSAYSLAALKNTELETQLQEKTSSVQHYQSlLTKKQREYQQSLEK-----WQQSHSHQFTEQQQR 521
Cdd:COG4717 355 EAEELEEELQLEeleQEIAALLAEAGVEDEEELRAALEQAEEYQE-LKEELEELEEQLEEllgelEELLEALDEEELEEE 433
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 499039972 522 IQMLQLSLEEVQPRVAEMEQELSSLQRERDEAQRtalllQNSLDQLTQEKQVEVRQNEE 580
Cdd:COG4717 434 LEELEEELEELEEELEELREELAELEAELEQLEE-----DGELAELLQELEELKAELRE 487
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
670-940 |
1.70e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.98 E-value: 1.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 670 LTESSARVSELEESQSQLHRQVSGLEQQLERARVslQEELSKRQEDNQVKEKKLREINQQNERLSESvrhlTLEVKKCRE 749
Cdd:COG4913 619 LAELEEELAEAEERLEALEAELDALQERREALQR--LAEYSWDEIDVASAEREIAELEAELERLDAS----SDDLAALEE 692
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 750 ELVSKESELERLRKDVGVKTSQISCMEESLQHIKSQLISKNDIVmdlekalnrSEADRRSCSQKVEILEGQLQMVQNEfa 829
Cdd:COG4913 693 QLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRL---------EAAEDLARLELRALLEERFAAALGD-- 761
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 830 dtlTQLQELKDVLQKTQKVSDERQASVEKltvQLRETQRE-LEERTHEVLDMDNALRERQGELQQRAKLlgqLDVAIKEH 908
Cdd:COG4913 762 ---AVERELRENLEERIDALRARLNRAEE---ELERAMRAfNREWPAETADLDADLESLPEYLALLDRL---EEDGLPEY 832
|
250 260 270
....*....|....*....|....*....|...
gi 499039972 909 KQEL-ERKVESLQQSLEARERELRDAQRELTDR 940
Cdd:COG4913 833 EERFkELLNENSIEFVADLLSKLRRAIREIKER 865
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
406-751 |
1.79e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.80 E-value: 1.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 406 QEEISSLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQEKTSAYSLAALKNTELETQLQEktss 485
Cdd:pfam17380 281 QKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIRQE---- 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 486 vqhyqslltkkqrEYQQSLEKWQQSHSHQFTEQQQRIQMLQLSLEEVQPRVAEMEQELSSLQRERDEAQRTALLLQNSLD 565
Cdd:pfam17380 357 -------------ERKRELERIRQEEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEME 423
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 566 QLTQEkQVEVRQNEefLQSFKEQAARSAAKVCELQSSlsacRKEMNSYLQQIEEMKKNYETELERNKEKVSSLQEKlhsT 645
Cdd:pfam17380 424 QIRAE-QEEARQRE--VRRLEEERAREMERVRLEEQE----RQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQ---R 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 646 TLVCQRSSEENLQLQLSLQQQQTMLTEssarvsELEESQSQLHRQVSGLEQQLERaRVSLQEELSKRQEDNQVKEKKLRE 725
Cdd:pfam17380 494 RKILEKELEERKQAMIEEERKRKLLEK------EMEERQKAIYEEERRREAEEER-RKQQEMEERRRIQEQMRKATEERS 566
|
330 340
....*....|....*....|....*.
gi 499039972 726 INQQNERLSESVRHLtLEVKKCREEL 751
Cdd:pfam17380 567 RLEAMEREREMMRQI-VESEKARAEY 591
|
|
| AcrA |
COG0845 |
Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope ... |
1083-1156 |
1.85e-03 |
|
Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope biogenesis, Defense mechanisms];
Pssm-ID: 440606 [Multi-domain] Cd Length: 324 Bit Score: 42.24 E-value: 1.85e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499039972 1083 KAQLDQTKTELEHAWKRATHLQSQLDQSQT---QHLQSQTQLEQSRTLYEQTRAQNSRLQAQLEHLTAVLNQTRVEA 1156
Cdd:COG0845 60 QAALAQAQAQLAAAQAQLELAKAELERYKAllkKGAVSQQELDQAKAALDQAQAALAAAQAALEQARANLAYTTIRA 136
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
383-1199 |
1.88e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 43.02 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 383 SKEAERLKQSNLIERLQDRLSRAQEEISSLQSSMAQRASHYQSlHTELLDKLKQATDTEKELKKKKARVAALEKQLQEKT 462
Cdd:COG3096 289 ELRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQA-ASDHLNLVQTALRQQEKIERYQEDLEELTERLEEQE 367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 463 SAYSLAALKNTELETQLQEKTSSVQHYQSLLTkkqrEYQQSLEKwQQSHSHQFTEQQQRIQMLQLSLEEVQPRVAEMEQE 542
Cdd:COG3096 368 EVVEEAAEQLAEAEARLEAAEEEVDSLKSQLA----DYQQALDV-QQTRAIQYQQAVQALEKARALCGLPDLTPENAEDY 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 543 LSSLQRERDEAQRTALLLQNSLDqLTQEKQVEVRQNEEFLQSFKEQAARSAAkvceLQSSLSACRK--EMNSYLQQIEEM 620
Cdd:COG3096 443 LAAFRAKEQQATEEVLELEQKLS-VADAARRQFEKAYELVCKIAGEVERSQA----WQTARELLRRyrSQQALAQRLQQL 517
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 621 KKNYeTELERNKEKVSSLQEKLHSttlVCQRSSEEnlqlQLSLQQQQTMLTESSARVSELEESQSQLHRQVSGLEQQLER 700
Cdd:COG3096 518 RAQL-AELEQRLRQQQNAERLLEE---FCQRIGQQ----LDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQ 589
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 701 ARvSLQEELSKRQE---DNQVKEKKLREinQQNERLSESVrhltlEVKKCREELVSKESELERLRKDVGVKTSQISCMEE 777
Cdd:COG3096 590 LR-ARIKELAARAPawlAAQDALERLRE--QSGEALADSQ-----EVTAAMQQLLEREREATVERDELAARKQALESQIE 661
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 778 SLQH-----------IKSQL-----------ISKND---------------IVMDLEKALnRSEADRRSCSQKVEILEGQ 820
Cdd:COG3096 662 RLSQpggaedprllaLAERLggvllseiyddVTLEDapyfsalygparhaiVVPDLSAVK-EQLAGLEDCPEDLYLIEGD 740
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 821 LQMvqneFADTLTQLQELKD-VLQKtqkvSDERQASVEKLTVQLRETQRELEERThEVLDmdnalRERQGELQQRAKLlg 899
Cdd:COG3096 741 PDS----FDDSVFDAEELEDaVVVK----LSDRQWRYSRFPEVPLFGRAAREKRL-EELR-----AERDELAEQYAKA-- 804
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 900 QLDVaikehkQELERKVESLQQSL------------EARERELRDAQRELTDrnmkesqELFACQQKLQKVLKELEETQG 967
Cdd:COG3096 805 SFDV------QKLQRLHQAFSQFVgghlavafapdpEAELAALRQRRSELER-------ELAQHRAQEQQLRQQLDQLKE 871
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 968 HCEGLSRELDASKLQTKETEAQLC-AVEEELTLKEarwlQSEARLQgmvtgleqelelereQHSKELESLqetrgqllkv 1046
Cdd:COG3096 872 QLQLLNKLLPQANLLADETLADRLeELREELDAAQ----EAQAFIQ---------------QHGKALAQL---------- 922
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1047 sEQISSTMRSSQEQLtvklQQSQTQLEEVSVRFDQTKAQLDQtkteLEHAWKRATHLQSQldqsqtqhlQSQTQLEQSRT 1126
Cdd:COG3096 923 -EPLVAVLQSDPEQF----EQLQADYLQAKEQQRRLKQQIFA----LSEVVQRRPHFSYE---------DAVGLLGENSD 984
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 499039972 1127 LyeqtraqNSRLQAQLEHLTAVLNQTRVEAAQLQSQlHASEKSVETSSDSLL-IKESEVARLQARISSLGRAAD 1199
Cdd:COG3096 985 L-------NEKLRARLEQAEEARREAREQLRQAQAQ-YSQYNQVLASLKSSRdAKQQTLQELEQELEELGVQAD 1050
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
432-645 |
1.91e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 43.12 E-value: 1.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 432 DKLKQATDTEKELKKKkarvaaLEKQLQEKTSAYSLAALKNTELETQlQEKTSSVQHYQSLLTKKQREYQQSLEKWQQSH 511
Cdd:TIGR01612 1503 DKNAKAIEKNKELFEQ------YKKDVTELLNKYSALAIKNKFAKTK-KDSEIIIKEIKDAHKKFILEAEKSEQKIKEIK 1575
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 512 SHQFT---------EQQQRIQMLQLSLEEVQPR---VAEMEQELSSLQRERDEAQRTALLLQ-NSLDQLTQEKQVEVRQN 578
Cdd:TIGR01612 1576 KEKFRieddaakndKSNKAAIDIQLSLENFENKflkISDIKKKINDCLKETESIEKKISSFSiDSQDTELKENGDNLNSL 1655
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 499039972 579 EEFLQSFKEQAARSAAKVCELQsslsacrkEMNSYLQQIE----EMKKNYETEL--------ERNKEKVSSLQEKLHST 645
Cdd:TIGR01612 1656 QEFLESLKDQKKNIEDKKKELD--------ELDSEIEKIEidvdQHKKNYEIGIiekikeiaIANKEEIESIKELIEPT 1726
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
371-647 |
2.00e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 42.64 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 371 GEGYQQLTRVLQSKEAERLKQSN-LIERLQDRLSRAQEEISSLQSSMAQR-ASHYQSLHTELLDKLKQATDTEKELKKKK 448
Cdd:COG5185 252 SDKLEKLVEQNTDLRLEKLGENAeSSKRLNENANNLIKQFENTKEKIAEYtKSIDIKKATESLEEQLAAAEAEQELEESK 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 449 ARVaalEKQLQEKTSAYSLAALKNTELETQLQEKTSSVQHYQ--SLLTKKQREYQQSLEKWQQSHSHQFTEQQQRIQMLq 526
Cdd:COG5185 332 RET---ETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEVelSKSSEELDSFKDTIESTKESLDEIPQNQRGYAQEI- 407
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 527 lsLEEVQPRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQEKQVEVRQNEEFLQSFKEQAARSAAKvcELQSSLSAC 606
Cdd:COG5185 408 --LATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREADEESQSRLEEAYDEINR--SVRSKKEDL 483
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 499039972 607 RKEMNSYLQQIEEMKKNYETELERNKEKVSSLQEKLHSTTL 647
Cdd:COG5185 484 NEELTQIESRVSTLKATLEKLRAKLERQLEGVRSKLDQVAE 524
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
117-332 |
2.03e-03 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 42.36 E-value: 2.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 117 IRQLEAELEAQAKELKAAELRAECCQEAAAHSDIVVATLTEELSTLREELEKKTALGKRAEQQRNQALENAEKLKEAFKD 196
Cdd:pfam19220 99 LREAEAAKEELRIELRDKTAQAEALERQLAAETEQNRALEEENKALREEAQAAEKALQRAEGELATARERLALLEQENRR 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 197 YKATISIKLKRVMESENKLKGSLIECDREKEELEMKCTELERQKAEHRQTISQLTEEVKQFKAAAARLQAQIEEAGHKAS 276
Cdd:pfam19220 179 LQALSEEQAAELAELTRRLAELETQLDATRARLRALEGQLAAEQAERERAEAQLEEAVEAHRAERASLRMKLEALTARAA 258
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 499039972 277 HLERQLMErgaecrdvasLRRELEDLRAVTHSQEQKVAQSQKEAQLSQTELAGLEA 332
Cdd:pfam19220 259 ATEQLLAE----------ARNQLRDRDEAIRAAERRLKEASIERDTLERRLAGLEA 304
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
391-578 |
2.22e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 42.31 E-value: 2.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 391 QSNLIERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQAtdtekelkkkKARVAALEKQLqektsayslaal 470
Cdd:PHA02562 186 LDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTI----------KAEIEELTDEL------------ 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 471 knTELETQLQEKTSSVQHYQSLLTKKQREYQQ--SLEKWQQSHSH------QFTEQQQRIQMLQLSLEEVQPRVAEME-- 540
Cdd:PHA02562 244 --LNLVMDIEDPSAALNKLNTAAAKIKSKIEQfqKVIKMYEKGGVcptctqQISEGPDRITKIKDKLKELQHSLEKLDta 321
|
170 180 190
....*....|....*....|....*....|....*....
gi 499039972 541 -QELSSLQRERDEAQRTALLLQNSLDQLTQEKQVEVRQN 578
Cdd:PHA02562 322 iDELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKA 360
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
43-286 |
2.28e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 42.31 E-value: 2.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 43 TAERR----------IFAEMESISASRKKVgcVRQENACLTLQ----------DEQLISDLDAMQYEMATSKSQVY--LR 100
Cdd:PHA02562 149 APARRklvedlldisVLSEMDKLNKDKIRE--LNQQIQTLDMKidhiqqqiktYNKNIEEQRKKNGENIARKQNKYdeLV 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 101 GPRAGVHNNVVVMSEQIRQLEAELEAQAKELK-----AAELRAE---CCQEAAAHSD-IVVATLTEELSTLREELEKKTA 171
Cdd:PHA02562 227 EEAKTIKAEIEELTDELLNLVMDIEDPSAALNklntaAAKIKSKieqFQKVIKMYEKgGVCPTCTQQISEGPDRITKIKD 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 172 LGKRAEQQRNQALENAEKLKEAFKDYkATISIKLKRVMESENKLKGSLIECDREkeelemkcteLERQKAEhrqtISQLT 251
Cdd:PHA02562 307 KLKELQHSLEKLDTAIDELEEIMDEF-NEQSKKLLELKNKISTNKQSLITLVDK----------AKKVKAA----IEELQ 371
|
250 260 270
....*....|....*....|....*....|....*
gi 499039972 252 EEVKQFKAAAARLQAQIEEAGHKASHLERQLMERG 286
Cdd:PHA02562 372 AEFVDNAEELAKLQDELDKIVKTKSELVKEKYHRG 406
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
384-1175 |
2.39e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 42.41 E-value: 2.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 384 KEAERLKQSNlIERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATDTEKELKKKKARvaalEKQLQEKTS 463
Cdd:pfam15921 334 REAKRMYEDK-IEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQ----NKRLWDRDT 408
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 464 AYSLAAlknTELETQLQEKTSSVQHYQSLLTKKQREYQQSLEKwQQSHSHQFTEQQQRIQMLQLSLEEVQPRVAEMEQEL 543
Cdd:pfam15921 409 GNSITI---DHLRRELDDRNMEVQRLEALLKAMKSECQGQMER-QMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEEL 484
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 544 SSLQRERDEAQRTALLLQNSLDQltQEKQVEVRQNEeflqsFKEQAARSAAKVCELQSslsacRKEMNSYLQQIEEMKKN 623
Cdd:pfam15921 485 TAKKMTLESSERTVSDLTASLQE--KERAIEATNAE-----ITKLRSRVDLKLQELQH-----LKNEGDHLRNVQTECEA 552
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 624 YETELERNKEKVSSLQEKLHSTTlvcQRSSEENLQLQLSLQQQQTMLTESSARVSELEESQSQLHRQVSGLeQQLERARV 703
Cdd:pfam15921 553 LKLQMAEKDKVIEILRQQIENMT---QLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKI-RELEARVS 628
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 704 SLQEELSKRQEDNQVKEKKLREINQQNERLSEsvrhltlEVKKCREELVSKESELERLRKDVGVKTSQiscMEESLQHIK 783
Cdd:pfam15921 629 DLELEKVKLVNAGSERLRAVKDIKQERDQLLN-------EVKTSRNELNSLSEDYEVLKRNFRNKSEE---METTTNKLK 698
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 784 SQLISKNDivmDLEKAlnrseadrRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQL 863
Cdd:pfam15921 699 MQLKSAQS---ELEQT--------RNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFL 767
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 864 RETQRELEERTHEVLDMDNalrerqgelqqraKLLGQLDVaIKEHKQELERKVESLQQSLEARERELRDAQrELTDRNMK 943
Cdd:pfam15921 768 KEEKNKLSQELSTVATEKN-------------KMAGELEV-LRSQERRLKEKVANMEVALDKASLQFAECQ-DIIQRQEQ 832
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 944 ESQEL---------------FACQQKLQ-KVLKELEETQGHCEGLSRELDASKLQTKETEAQlcAVEEELTlKEARWLQS 1007
Cdd:pfam15921 833 ESVRLklqhtldvkelqgpgYTSNSSMKpRLLQPASFTRTHSNVPSSQSTASFLSHHSRKTN--ALKEDPT-RDLKQLLQ 909
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1008 EARLQGMVTGLEQELELEREQHSKELESLQE-TRGQLLKVSEQISSTMRSSQEQLTVKLQQSQT-----------QLEEV 1075
Cdd:pfam15921 910 ELRSVINEEPTVQLSKAEDKGRAPSLGALDDrVRDCIIESSLRSDICHSSSNSLQTEGSKSSETcsrepvllhagELEDP 989
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1076 SVRF---DQTKAQLDQTKTELEHAWKRATHLQSQLDQSQTQHLQSQTQLEQSRTLYEQTRAQNS-------------RLQ 1139
Cdd:pfam15921 990 SSCFtfpSTASPSVKNSASRSFHSSPKKSPVHSLLTSSAEGSIGSSSQYRSAKTIHSPDSVKDSqslpiettgktcrKLQ 1069
|
810 820 830
....*....|....*....|....*....|....*.
gi 499039972 1140 AQLEHLTAVLNQTRVEAAQLQSQLHASEKSVETSSD 1175
Cdd:pfam15921 1070 NRLESLQTLVEDLQLKNQAMSSMIRNQEKRIQKVKD 1105
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
670-1162 |
2.46e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.59 E-value: 2.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 670 LTESSARVSELEESQSQLHRQVSGL----EQQLERARVSLQEELSKRQEDNQVKEKKLREI-----------NQQNERLS 734
Cdd:COG4913 311 LERLEARLDALREELDELEAQIRGNggdrLEQLEREIERLERELEERERRRARLEALLAALglplpasaeefAALRAEAA 390
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 735 ESVRHLTLEVKKCREELVSKESELERLRKDVGVKTSQIscmeESLQHIKSqLISKNDIVM--DLEKALNRSEADrrscsq 812
Cdd:COG4913 391 ALLEALEEELEALEEALAEAEAALRDLRRELRELEAEI----ASLERRKS-NIPARLLALrdALAEALGLDEAE------ 459
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 813 kveilegqlqmvqnefadtLTQLQELKDVLQKtqkvsDER-QASVEKLtvqLRETQREL---EERTHEVLDMDNALRERq 888
Cdd:COG4913 460 -------------------LPFVGELIEVRPE-----EERwRGAIERV---LGGFALTLlvpPEHYAAALRWVNRLHLR- 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 889 GELQ-QRAKLLGQLDVAIKEHKQELERKVES--------LQQSLEAR--------ERELRDAQRELTDRNM-KESQELFA 950
Cdd:COG4913 512 GRLVyERVRTGLPDPERPRLDPDSLAGKLDFkphpfrawLEAELGRRfdyvcvdsPEELRRHPRAITRAGQvKGNGTRHE 591
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 951 C----------------QQKLQKVLKELEETQGHCEGLSRELDASKLQTKETEAQLCAVE--EELTLKEARWLQSEARLQ 1012
Cdd:COG4913 592 KddrrrirsryvlgfdnRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQrlAEYSWDEIDVASAEREIA 671
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1013 gmvtgleqelelereQHSKELESLQETRGQLLKVSEQIsstmrssqEQLTVKLQQSQTQLEEVSVRFDQTKAQLDQTKTE 1092
Cdd:COG4913 672 ---------------ELEAELERLDASSDDLAALEEQL--------EELEAELEELEEELDELKGEIGRLEKELEQAEEE 728
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1093 LEHAWKRATHLQSQLDQSQTQHLQSQTQLEQSRTLYEQTRAQnsrLQAQLEHLTAVLNQTRVEAAQLQSQ 1162
Cdd:COG4913 729 LDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELREN---LEERIDALRARLNRAEEELERAMRA 795
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
226-929 |
2.49e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 42.65 E-value: 2.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 226 KEELEMKCTELERQKAEHRQTISQLTeevkqfkaaaarlqaQIEEAGHKASHLERQLMERGAECRDVASLRRELEDLRAV 305
Cdd:TIGR00618 221 KQVLEKELKHLREALQQTQQSHAYLT---------------QKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQER 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 306 THSQEQKVAQSQKEAQLSQTELAgLEAILSLLHLREGTLGQICASPCMLPPVDYTGAAHLMKLKPGEGYQQLTRVLQSKE 385
Cdd:TIGR00618 286 INRARKAAPLAAHIKAVTQIEQQ-AQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVA 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 386 AERLKQSNLIERLQDRLSRAQEEISSLQSSMaQRASHYQSLHTELLDKLKQATDTEKELKKKKARVAALEKQLQEKTSAY 465
Cdd:TIGR00618 365 TSIREISCQQHTLTQHIHTLQQQKTTLTQKL-QSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELC 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 466 SLAALKntELETQLQEKTSSVQHYQSLLTKKQREyqQSLEKWQQSHSHQFTEQQQRIQMLQLSLEEVQPRVAEMEQELSS 545
Cdd:TIGR00618 444 AAAITC--TAQCEKLEKIHLQESAQSLKEREQQL--QTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQD 519
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 546 LQRERDEAQRTALLLQNSLDQLTQEKQVEVRQNEEF--LQSFKEQAARSAAKVCELQSSLSACRKEMNSYLQQIEEMKKN 623
Cdd:TIGR00618 520 IDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERkqRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDL 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 624 YETELERNKEKVSSLQEKLhsttlvcqrsseenlqlqlSLQQQQTMLTESSARVSELEESQSQLHRQVSGLEQQLERARV 703
Cdd:TIGR00618 600 TEKLSEAEDMLACEQHALL-------------------RKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQERV 660
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 704 SLQEELSKRQEdnqvkekklREINQQNERLSESVRHLTLEVKKCREELVSKESELERLRKDVGVKTSQISCMEESLQHIK 783
Cdd:TIGR00618 661 REHALSIRVLP---------KELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLG 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 784 SQLISKNDIVMDLEKALnRSEADRRSCSQKVEILEGQLQMVQNEFadTLTQLQELKDVLQKTQKVSDERQASVEKLTVQL 863
Cdd:TIGR00618 732 SDLAAREDALNQSLKEL-MHQARTVLKARTEAHFNNNEEVTAALQ--TGAELSHLAAEIQFFNRLREEDTHLLKTLEAEI 808
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 499039972 864 RETQRE-LEERTHEVLDMDNALRERQGELQQRAKLLGQLDVAIKEHKQELERKVESLQQSLEARERE 929
Cdd:TIGR00618 809 GQEIPSdEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKIIQLS 875
|
|
| PRK10927 |
PRK10927 |
cell division protein FtsN; |
1031-1141 |
2.64e-03 |
|
cell division protein FtsN;
Pssm-ID: 236797 [Multi-domain] Cd Length: 319 Bit Score: 41.59 E-value: 2.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1031 KELESLQE--------TRGQLLKVSEQISSTMRSSQEQLTVKLQQSQTQLEEVSVRfDQTKAQLDQT--KTELEHAWKRA 1100
Cdd:PRK10927 87 KELESRQPgvraptepSAGGEVKTPEQLTPEQRQLLEQMQADMRQQPTQLVEVPWN-EQTPEQRQQTlqRQRQAQQLAEQ 165
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 499039972 1101 THLQSQLDQSQtQHLQSQTQLEQSRTLYEQTRAQNSRLQAQ 1141
Cdd:PRK10927 166 QRLAQQSRTTE-QSWQQQTRTSQAAPVQAQPRQSKPASTQQ 205
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
726-966 |
2.86e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 42.31 E-value: 2.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 726 INQQNERLSESVRHLTLEVKKCREELVSKESELERLRKdvgvktsqiscmeeslqhiksqlisKNDIVMdlekalnrSEA 805
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQ-------------------------KNGLVD--------LSE 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 806 DRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQAS--VEKLTVQLRETQRELEErthevldmdna 883
Cdd:COG3206 213 EAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSpvIQQLRAQLAELEAELAE----------- 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 884 LRERQGE--------LQQRAKLLGQLDVAIKEHKQELERKVESLQQSLEARERELRDAQRELTDRNMKESQ------ELF 949
Cdd:COG3206 282 LSARYTPnhpdvialRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAElrrlerEVE 361
|
250
....*....|....*..
gi 499039972 950 ACQQKLQKVLKELEETQ 966
Cdd:COG3206 362 VARELYESLLQRLEEAR 378
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
864-1009 |
3.30e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 41.69 E-value: 3.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 864 RETQRELEERTHEVLDMDNALRERQGELQQRAKLLGQLDVAIKEHKQELERKveslQQSLEARERELRDAQRELTDRnMK 943
Cdd:PRK12704 71 NEFEKELRERRNELQKLEKRLLQKEENLDRKLELLEKREEELEKKEKELEQK----QQELEKKEEELEELIEEQLQE-LE 145
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 499039972 944 ESQELFACQQKlQKVLKELEETqghceglSRELDASKLQTKETEAQLCAVeeeltlKEARWLQSEA 1009
Cdd:PRK12704 146 RISGLTAEEAK-EILLEKVEEE-------ARHEAAVLIKEIEEEAKEEAD------KKAKEILAQA 197
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
395-939 |
3.31e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 3.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 395 IERLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELlDKLKQATDTEKelkkkKARVAALEKQLQEKTSAYSLAALKNTE 474
Cdd:COG4913 290 LELLEAELEELRAELARLEAELERLEARLDALREEL-DELEAQIRGNG-----GDRLEQLEREIERLERELEERERRRAR 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 475 LETQLQEKTSSVQHYQSLLTKKQREYQQSLEKWQQSHShqftEQQQRIQMLQLSLEEVQPRVAEMEQELSSLQ------- 547
Cdd:COG4913 364 LEALLAALGLPLPASAEEFAALRAEAAALLEALEEELE----ALEEALAEAEAALRDLRRELRELEAEIASLErrksnip 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 548 ------------------------------RERDEAQRTA---LLLQNSLDQLTQEKQ-------VEVRQNEEFLQSFKE 587
Cdd:COG4913 440 arllalrdalaealgldeaelpfvgelievRPEEERWRGAierVLGGFALTLLVPPEHyaaalrwVNRLHLRGRLVYERV 519
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 588 QAARSAAK---------VCELQSSLSACRKEMNSYLQQieemkknyetelERNKEKVSSLQEkLHST----TLVCQRSSE 654
Cdd:COG4913 520 RTGLPDPErprldpdslAGKLDFKPHPFRAWLEAELGR------------RFDYVCVDSPEE-LRRHpraiTRAGQVKGN 586
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 655 --------------------ENLQLQLSLQQQQTMLTEssaRVSELEESQSQLHRQVSGLEQQLERARVslQEELSKRQE 714
Cdd:COG4913 587 gtrhekddrrrirsryvlgfDNRAKLAALEAELAELEE---ELAEAEERLEALEAELDALQERREALQR--LAEYSWDEI 661
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 715 DNQVKEKKLREINQQNERLSES---VRHLTLEVKKCREELVSKESELERLRKDVGVKTSQISCMEESLQHIKSQLISKND 791
Cdd:COG4913 662 DVASAEREIAELEAELERLDASsddLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAED 741
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 792 IVM-----DLEKALNRSEADRRScSQKVEILEGQLQMVQNEFADTLTQLQEL-KDVLQKTQKVSDERQASVEkltvQLRE 865
Cdd:COG4913 742 LARlelraLLEERFAAALGDAVE-RELRENLEERIDALRARLNRAEEELERAmRAFNREWPAETADLDADLE----SLPE 816
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 866 TQRELEERTHEVL-----DMDNALRERQGelQQRAKLLGQLDVAIKEHKQELERKVESLQQS---------LEARER--- 928
Cdd:COG4913 817 YLALLDRLEEDGLpeyeeRFKELLNENSI--EFVADLLSKLRRAIREIKERIDPLNDSLKRIpfgpgrylrLEARPRpdp 894
|
650
....*....|.
gi 499039972 929 ELRDAQRELTD 939
Cdd:COG4913 895 EVREFRQELRA 905
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
619-830 |
3.34e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 3.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 619 EMKKNYETELERNKEKVSSLQEKLHSTTLVCQRSSEENLQLQLSLQQQQTMLTESSARVSELEESQSQLHRQVSGLEQQL 698
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 699 ERARVSLQEELSKRQEDNQVKEKKL---REINQQNERLSESVRHLTLEVKKCREELVSKESELERLRKDVGVKTSQISCM 775
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 499039972 776 EESLQHIKSQLIS----KNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFAD 830
Cdd:COG4942 180 LAELEEERAALEAlkaeRQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
115-319 |
3.40e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 3.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 115 EQIRQLEAELEAQAKELKAAELRAECCQEAAAHSDIVVATLTEELSTLREELEKKTALGKRA--EQQRNQALENAEKLKE 192
Cdd:COG4913 610 AKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREIAelEAELERLDASSDDLAA 689
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 193 afkdykatisiklkrvmesenkLKGSLIECDREKEELEMKCTELERQKAEHRQTISQLTEEVKQFKAAAARLQAQIEEag 272
Cdd:COG4913 690 ----------------------LEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARL-- 745
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 499039972 273 HKASHLE---RQLMERGAECRDVASLRRELEDLRAVTHSQEQKVAQSQKE 319
Cdd:COG4913 746 ELRALLEerfAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
675-894 |
3.41e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 41.92 E-value: 3.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 675 ARVSELEESQSQLHRQVSGLEQQLErARVSLQEELSKRQEDNQVKE--------KKLREINQQNERLSESVRHLTLE--- 743
Cdd:PHA02562 174 DKIRELNQQIQTLDMKIDHIQQQIK-TYNKNIEEQRKKNGENIARKqnkydelvEEAKTIKAEIEELTDELLNLVMDied 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 744 ----VKKCREELVSKESELERLRKDV------GV---KTSQISCMEESLQHIKSQLiskNDIVMDLEKALNRSEadrrsc 810
Cdd:PHA02562 253 psaaLNKLNTAAAKIKSKIEQFQKVIkmyekgGVcptCTQQISEGPDRITKIKDKL---KELQHSLEKLDTAID------ 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 811 sqKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHEVLDMDNALRERQGE 890
Cdd:PHA02562 324 --ELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKE 401
|
....
gi 499039972 891 LQQR 894
Cdd:PHA02562 402 KYHR 405
|
|
| Surf_Exclu_PgrA |
TIGR04320 |
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface ... |
1056-1151 |
3.46e-03 |
|
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface proteins of a number of Firmutes. Many members have LPXTG C-terminal anchoring motifs and a substantial number have the KxYKxGKxW putative sorting signal at the N-terminus. The tetracycline resistance plasmid pCF10 in Enterococcus faecalis promotes conjugal plasmid transfer in response to sex pheromones, but PgrA/Sec10 encoded by that plasmid, a member of this family, specifically inhibits the ability of cells to receive homologous plasmids. The phenomenon is called surface exclusion.
Pssm-ID: 275124 [Multi-domain] Cd Length: 356 Bit Score: 41.25 E-value: 3.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1056 SSQEQLTVKLQQSQTQLEEVSVRFDQTKAQLDQTKTELEHAWKRATHLQSQLDQSQTQHLQ-SQTQLEQSRTLYEQTRAQ 1134
Cdd:TIGR04320 254 NSLAALQAKLATAQADLAAAQTALNTAQAALTSAQTAYAAAQAALATAQKELANAQAQALQtAQNNLATAQAALANAEAR 333
|
90
....*....|....*..
gi 499039972 1135 NSRLQAQLEHLTAVLNQ 1151
Cdd:TIGR04320 334 LAKAKEALANLNADLAK 350
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
704-907 |
4.05e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 41.35 E-value: 4.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 704 SLQEELSKRQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKCREELVSKESELERLRKDVGVKTSQISCMEESLQhIK 783
Cdd:COG3883 20 AKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALY-RS 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 784 SQLISKNDIVM---DLEKALNRSEADRRSCSQKVEILEgQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLT 860
Cdd:COG3883 99 GGSVSYLDVLLgseSFSDFLDRLSALSKIADADADLLE-ELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQ 177
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 499039972 861 VQLRETQRELEERTHEVLDMDNALRERQGELQQRAKLLGQLDVAIKE 907
Cdd:COG3883 178 AEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAA 224
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
174-502 |
4.73e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.48 E-value: 4.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 174 KRAEQQRNQALENAEKLKEAFKDYKatisiKLKRVMESENKLKGSLI----ECDREKE--ELEMKCTELERQKAEHRQTI 247
Cdd:COG3096 785 KRLEELRAERDELAEQYAKASFDVQ-----KLQRLHQAFSQFVGGHLavafAPDPEAElaALRQRRSELERELAQHRAQE 859
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 248 SQLTEEVKQFKAAAARLQAQIEEAGHKAshlERQLMERGAECR--------DVASLRR------ELEDLRAVTHS---QE 310
Cdd:COG3096 860 QQLRQQLDQLKEQLQLLNKLLPQANLLA---DETLADRLEELReeldaaqeAQAFIQQhgkalaQLEPLVAVLQSdpeQF 936
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 311 QKVAQSQKEAQLSQTEL-AGLEAILSLLHLR-----EGTLGQICASPCMLPpvdytgaahlmKLKpgegyQQLTRVlqsk 384
Cdd:COG3096 937 EQLQADYLQAKEQQRRLkQQIFALSEVVQRRphfsyEDAVGLLGENSDLNE-----------KLR-----ARLEQA---- 996
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 385 EAERLKQSNLIERLQDRLSRAQEEISSLQSSMAQRashyQSLHTELLDKLKQ---ATDTEKElkkkkARVAALEKQLQEK 461
Cdd:COG3096 997 EEARREAREQLRQAQAQYSQYNQVLASLKSSRDAK----QQTLQELEQELEElgvQADAEAE-----ERARIRRDELHEE 1067
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 499039972 462 TSAyslAALKNTELETQLQEKTSSVQHYQSLLTKKQREYQQ 502
Cdd:COG3096 1068 LSQ---NRSRRSQLEKQLTRCEAEMDSLQKRLRKAERDYKQ 1105
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
678-1171 |
4.78e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 41.35 E-value: 4.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 678 SELEESQSQLHRQVSGLEQQLERARVSLQEelsKRQEDNQVKEKKLREINQQNERLSESVRHLTLEVKKcreelvSKESE 757
Cdd:pfam10174 174 KKSGEEDWERTRRIAEAEMQLGHLEVLLDQ---KEKENIHLREELHRRNQLQPDPAKTKALQTVIEMKD------TKISS 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 758 LERLRKDV-----GVKTSQISCMEESLQHIKSQLISKN------DIVMDLEKALNRSEADRRSCSQKVEILegqlqmvQN 826
Cdd:pfam10174 245 LERNIRDLedevqMLKTNGLLHTEDREEEIKQMEVYKShskfmkNKIDQLKQELSKKESELLALQTKLETL-------TN 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 827 EFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHEVLDMDNALRERQGELQQrakLLGQLDVaiK 906
Cdd:pfam10174 318 QNSDCKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKSTLAGEIRD---LKDMLDV--K 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 907 EHK-QELERKVESLQQSLEARER---ELRDAQREL------TDRNMKESQELFACQQKLQKVLKELEETQghCEGLSREL 976
Cdd:pfam10174 393 ERKiNVLQKKIENLQEQLRDKDKqlaGLKERVKSLqtdssnTDTALTTLEEALSEKERIIERLKEQRERE--DRERLEEL 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 977 DASKLQTKETEAQLCAVEEELTLKEARWLQSEARLQGMVTGLEQELELEREQH---SKELESLQETRGQLLK-------- 1045
Cdd:pfam10174 471 ESLKKENKDLKEKVSALQPELTEKESSLIDLKEHASSLASSGLKKDSKLKSLEiavEQKKEECSKLENQLKKahnaeeav 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1046 -VSEQISSTMRSSQEQLTVKLQQS---QTQLE---EVSVRFDQTKAQLDQTKTELEHAWKRATHLQSQlDQSQTQHLQSQ 1118
Cdd:pfam10174 551 rTNPEINDRIRLLEQEVARYKEESgkaQAEVErllGILREVENEKNDKDKKIAELESLTLRQMKEQNK-KVANIKHGQQE 629
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 499039972 1119 TQLEQSRTLYEQTRAQNSR----LQAQLEHLTAVLNQTRVEAAQLQSQLHASEKSVE 1171
Cdd:pfam10174 630 MKKKGAQLLEEARRREDNLadnsQQLQLEELMGALEKTRQELDATKARLSSTQQSLA 686
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
237-465 |
4.85e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 4.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 237 ERQKAEHRQTISQLTEEVKQFKAAAARLQAQIEEAGHKASHLERqLMERGAECRDVASLRRELEDLRAVthsqeqkvaqs 316
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQR-LAEYSWDEIDVASAEREIAELEAE----------- 676
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 317 QKEAQLSQTELAGLEAILsllhlregtlgqicaspcmlppvdytgaahlmklkpgegyQQLTRVLQSKEAERLKQSNLIE 396
Cdd:COG4913 677 LERLDASSDDLAALEEQL----------------------------------------EELEAELEELEEELDELKGEIG 716
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 397 RLQDRLSRAQEEISSLQSSMAQRASHYQSLHTELLDKLKQATDT-----------EKELKKKKARVAALEKQLQEKTSAY 465
Cdd:COG4913 717 RLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGdaverelrenlEERIDALRARLNRAEEELERAMRAF 796
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
115-301 |
5.55e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.18 E-value: 5.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 115 EQIRQLEAELEAQAKELKAAELRAECCQEAAAHSDIVVATLTEE---LSTLREELEKKTALGKRAEQQRnqalENAEKLK 191
Cdd:PRK02224 544 ERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERiesLERIRTLLAAIADAEDEIERLR----EKREALA 619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 192 EAFKDYKATISIKLKRVMESENKLKGSLIECDREK--------EELEMKCTELERQKAEHRQTISQLTEEVKQF------ 257
Cdd:PRK02224 620 ELNDERRERLAEKRERKRELEAEFDEARIEEAREDkeraeeylEQVEEKLDELREERDDLQAEIGAVENELEELeelrer 699
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 499039972 258 -KAAAARLQAqIEEAGHKASHLERQLMERGAECR--DVASLRRELED 301
Cdd:PRK02224 700 rEALENRVEA-LEALYDEAEELESMYGDLRAELRqrNVETLERMLNE 745
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
751-1116 |
5.95e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.04 E-value: 5.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 751 LVSKESELERLRKDVGVKTSQISCMEESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFAD 830
Cdd:PLN02939 30 RLAVSCRARRRGFSSQQKKKRGKNIAPKQRSSNSKLQSNTDENGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEAIA 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 831 TLTqlqelkdvLQKTQKVSDERQAS---VEKLTVQLRETQReleerthevldmdNALRERQGELQQraklLGQLDVAIKE 907
Cdd:PLN02939 110 AID--------NEQQTNSKDGEQLSdfqLEDLVGMIQNAEK-------------NILLLNQARLQA----LEDLEKILTE 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 908 hKQELERKVESLQQSLEARERELRDAQRELTDRNMKESQelfacQQKLQKVLKELEETQGHCE-GLSRELDASKLQT--- 983
Cdd:PLN02939 165 -KEALQGKINILEMRLSETDARIKLAAQEKIHVEILEEQ-----LEKLRNELLIRGATEGLCVhSLSKELDVLKEENmll 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 984 --------------KETEAQLCAVEEELTLKEARWLQSEARLQGMVTGLEQELELEREQHSKELESLQETRGQLLKVSEQ 1049
Cdd:PLN02939 239 kddiqflkaelievAETEERVFKLEKERSLLDASLRELESKFIVAQEDVSKLSPLQYDCWWEKVENLQDLLDRATNQVEK 318
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 499039972 1050 ISSTMRSSQEqLTVKLQQSQTQLEEVSV-RFDQTKAQLDQTKTEL--EH--AWKRATHLQSQLDQSQTQHLQ 1116
Cdd:PLN02939 319 AALVLDQNQD-LRDKVDKLEASLKEANVsKFSSYKVELLQQKLKLleERlqASDHEIHSYIQLYQESIKEFQ 389
|
|
| PRK11578 |
PRK11578 |
macrolide transporter subunit MacA; Provisional |
1041-1156 |
6.15e-03 |
|
macrolide transporter subunit MacA; Provisional
Pssm-ID: 183211 [Multi-domain] Cd Length: 370 Bit Score: 40.53 E-value: 6.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1041 GQLLKVSEQISSTMRSSQEQLTVKLQQSQTQLEEVSVRFDQTKAQLDQTKTELEHAwkRAThLQSQLDQSQTQHLQSQ-- 1118
Cdd:PRK11578 70 GQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLA--RVT-LSRQQRLAKTQAVSQQdl 146
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 499039972 1119 ----TQLEQSRTLYEQTRAQNSRLQAQLEHLTAVLNQTRVEA 1156
Cdd:PRK11578 147 dtaaTELAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVA 188
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
818-1009 |
7.16e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.58 E-value: 7.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 818 EGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQASVEKLTVQLRETQRELEERTHEVLDMDNALRERQGELQQRAK- 896
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARa 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 897 ----------------------LLGQLDV--AIKEHKQELERKVESLQQSLEARERELRDAQRELTDRnmkesqelfacQ 952
Cdd:COG3883 95 lyrsggsvsyldvllgsesfsdFLDRLSAlsKIADADADLLEELKADKAELEAKKAELEAKLAELEAL-----------K 163
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 499039972 953 QKLQKVLKELEETQGHCEGLSRELDAsklQTKETEAQLCAVEEELTLKEARWLQSEA 1009
Cdd:COG3883 164 AELEAAKAELEAQQAEQEALLAQLSA---EEAAAEAQLAELEAELAAAEAAAAAAAA 217
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
775-1192 |
7.46e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 40.77 E-value: 7.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 775 MEESLQHIKSQLISKNDIVMDLEKALNRSEADRRSCSQKVEILEGQLQMVQNEFADTLTQLQELKDVLQKTQKVSDERQA 854
Cdd:TIGR04523 38 LEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKE 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 855 SVEKLTVQLRETQRELEERTHEVLDMDNALRERQGELqqrakllgqldVAIKEHKQELERKVESLQQSLEARERELRDAQ 934
Cdd:TIGR04523 118 QKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKEL-----------EKLNNKYNDLKKQKEELENELNLLEKEKLNIQ 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 935 RELTDRNMKESqelfacqqKLQKVLKELEETQGHCEGLSRELDASKLQTKETEAQLcaveeeltlkearwlqsearlqgm 1014
Cdd:TIGR04523 187 KNIDKIKNKLL--------KLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNI------------------------ 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1015 vtgleqelelereqhSKELESLQETRGQLLKVSEQISSTmRSSQEQLTVKLQQSQTQLEEVSVRFDQTKAQLDQTKTELE 1094
Cdd:TIGR04523 235 ---------------EKKQQEINEKTTEISNTQTQLNQL-KDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEIS 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1095 HAWKRA-----THLQSQLDQSQTQHLQSQTQLEQSRTLYEQTRAQNSRLQAQLEHLTAVLNQTRVEAAQLQSQLHASEKS 1169
Cdd:TIGR04523 299 DLNNQKeqdwnKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKE 378
|
410 420
....*....|....*....|...
gi 499039972 1170 VETSSDSLLIKESEVARLQARIS 1192
Cdd:TIGR04523 379 NQSYKQEIKNLESQINDLESKIQ 401
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
224-643 |
8.14e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.52 E-value: 8.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 224 REKEELEMKCTELERQKAEHRQtisqLTEEVKQFKAAAARLQAQIEEAGHKASHLERQLmERGAECRDVASLRRELEDL- 302
Cdd:COG4717 71 KELKELEEELKEAEEKEEEYAE----LQEELEELEEELEELEAELEELREELEKLEKLL-QLLPLYQELEALEAELAELp 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 303 ---------RAVTHSQEQKVAQSQKEAQLSQTELAGLEAILSLLHLREgtlgqicaspcmlppvdytgaahlmklkpgeg 373
Cdd:COG4717 146 erleeleerLEELRELEEELEELEAELAELQEELEELLEQLSLATEEE-------------------------------- 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 374 YQQLTRVLQSKEAERLKQSNLIERLQDRLSRAQEEISSLQSSMaQRASHYQSLHTELLDKLKQAT-----DTEKELKKKK 448
Cdd:COG4717 194 LQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENEL-EAAALEERLKEARLLLLIAAAllallGLGGSLLSLI 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 449 ARVAALEKQLQEKTSAYSLAALKNTELETQLQEKTSSVQHYQSLltkkqreYQQSLEKWQQSHSHQFTEQQQRIQMLQLS 528
Cdd:COG4717 273 LTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEEL-------EEEELEELLAALGLPPDLSPEELLELLDR 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 529 LEEVQPRVAEMEQELSSLQRERDEAQRTALLLQNSLDQLTQ-----EKQVEVRQNEEFLQSFKEQAARSAAKVCELQSSL 603
Cdd:COG4717 346 IEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEElraalEQAEEYQELKEELEELEEQLEELLGELEELLEAL 425
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 499039972 604 SacRKEMNSYLQQIEEMKKNYETELERNKEKVSSLQEKLH 643
Cdd:COG4717 426 D--EEELEEELEELEEELEELEEELEELREELAELEAELE 463
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
1036-1156 |
9.68e-03 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 40.03 E-value: 9.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 499039972 1036 LQETRGQLLKVSEQISSTMRSSQEQLtvKLQQSQTQLEEVSVRFDQTKAQLDQ----------TKTELEHAWKRATHLQS 1105
Cdd:COG1566 85 LAQAEAQLAAAEAQLARLEAELGAEA--EIAAAEAQLAAAQAQLDLAQRELERyqalykkgavSQQELDEARAALDAAQA 162
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 499039972 1106 QLDQSQTQHLQSQTQLEQSRTLyEQTRAQNSRLQAQLEHLTAVLNQTRVEA 1156
Cdd:COG1566 163 QLEAAQAQLAQAQAGLREEEEL-AAAQAQVAQAEAALAQAELNLARTTIRA 212
|
|
| |
