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Conserved domains on  [gi|449439087|ref|XP_004137319|]
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uncharacterized protein LOC101214785 [Cucumis sativus]

Protein Classification

DUF1639 domain-containing protein( domain architecture ID 10544624)

DUF1639 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1639 pfam07797
Protein of unknown function (DUF1639); This approximately 50 residue region is found in a ...
 171-219 4.17e-21

Protein of unknown function (DUF1639); This approximately 50 residue region is found in a number of sequences derived from hypothetical plant proteins. This region features a highly basic 5 amino-acid stretch towards its centre.


:

Pssm-ID: 400240  Cd Length: 50  Bit Score: 82.59  E-value: 4.17e-21
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 449439087  171 LSKEELEQDFAVLVG-RLPRRPKKRPRAVQKQMDALFPGLLLTEITLDSY 219
Cdd:pfam07797   1 LSREEIEEDFLAMTGsKPPRRPKKRPKNVQKQLDSLFPGLWLSEVTPDSY 50
 
Name Accession Description Interval E-value
DUF1639 pfam07797
Protein of unknown function (DUF1639); This approximately 50 residue region is found in a ...
 171-219 4.17e-21

Protein of unknown function (DUF1639); This approximately 50 residue region is found in a number of sequences derived from hypothetical plant proteins. This region features a highly basic 5 amino-acid stretch towards its centre.


Pssm-ID: 400240  Cd Length: 50  Bit Score: 82.59  E-value: 4.17e-21
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 449439087  171 LSKEELEQDFAVLVG-RLPRRPKKRPRAVQKQMDALFPGLLLTEITLDSY 219
Cdd:pfam07797   1 LSREEIEEDFLAMTGsKPPRRPKKRPKNVQKQLDSLFPGLWLSEVTPDSY 50
 
Name Accession Description Interval E-value
DUF1639 pfam07797
Protein of unknown function (DUF1639); This approximately 50 residue region is found in a ...
 171-219 4.17e-21

Protein of unknown function (DUF1639); This approximately 50 residue region is found in a number of sequences derived from hypothetical plant proteins. This region features a highly basic 5 amino-acid stretch towards its centre.


Pssm-ID: 400240  Cd Length: 50  Bit Score: 82.59  E-value: 4.17e-21
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 449439087  171 LSKEELEQDFAVLVG-RLPRRPKKRPRAVQKQMDALFPGLLLTEITLDSY 219
Cdd:pfam07797   1 LSREEIEEDFLAMTGsKPPRRPKKRPKNVQKQLDSLFPGLWLSEVTPDSY 50
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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