|
Name |
Accession |
Description |
Interval |
E-value |
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
22-734 |
2.36e-74 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 265.94 E-value: 2.36e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 22 FNFSC-HHDESFALLQFESSFtllsstsfdyctgNEPST--TTWKNGTDCCSWNGVTCDTISgRVIGLNLGCEGLQGILh 98
Cdd:PLN00113 21 LNFSMlHAEELELLLSFKSSI-------------NDPLKylSNWNSSADVCLWQGITCNNSS-RVVSIDLSGKNISGKI- 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 99 pNSTLFHLVHLQTLNLVYNNFSGSRFHSKFGGFQSLTHLYLSYSNIYGEIPTqiSYLSKLQSLYLSGNElvlkeitlnrl 178
Cdd:PLN00113 86 -SSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNM----------- 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 179 lqnatdlqelflyrtnmssirpnsfpllfnqssslvilslkatelsgnlknnflclpsiqelymsdnpnFEGQLP-ELSC 257
Cdd:PLN00113 152 ---------------------------------------------------------------------LSGEIPnDIGS 162
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 258 SISLRILDLSVCQFQGKIPISFSNLAHLTSLILSSNRLNGSIPSSLLTLPRLTFLDLGYNQLSGRIPNAFQMSNKFQKLD 337
Cdd:PLN00113 163 FSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLD 242
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 338 LSHNKIEGVVPTSISNLQQLIHLDLGWNSFSDQIPSSLSNLQQLIHLDLGSNSFSGQILSSFSNLQQLIHLDLGWNSFSG 417
Cdd:PLN00113 243 LVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTG 322
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 418 QIPFSLSNLQQLIHLDISSNAFSGPIPDVFGGMTKLQELDLDYNKLEGQIPSSLFNLTQLVALGCSNNKLDGPLPNKITG 497
Cdd:PLN00113 323 KIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGA 402
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 498 FQKLTNLRLNDNLINGTIPSSL----LSYSLDtlvLSNNRLQGNIPECIFSLTKLDELDLSSNNLSGvvNFKLFSKFADL 573
Cdd:PLN00113 403 CRSLRRVRLQDNSFSGELPSEFtklpLVYFLD---ISNNNLQGRINSRKWDMPSLQMLSLARNKFFG--GLPDSFGSKRL 477
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 574 EILSLSRNsqlslKFESNVTYSFtnlqilklssvnliefhnlqGEFPSLSHLDLSKNKLNGRMPNwflgniywqsvDLSh 653
Cdd:PLN00113 478 ENLDLSRN-----QFSGAVPRKL--------------------GSLSELMQLKLSENKLSGEIPD-----------ELS- 520
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 654 nlftSIDQFINlnaseisvLDLSFNLLNGEIPLAVCDISSLEFLNLGNNNLTGVIPQCLAESPFLYVLNLQMNKFHGTLP 733
Cdd:PLN00113 521 ----SCKKLVS--------LDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588
|
.
gi 1995123762 734 S 734
Cdd:PLN00113 589 S 589
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
267-831 |
6.34e-74 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 264.79 E-value: 6.34e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 267 SVCQFQGkipISFSNLAHLTSLILSSNRLNGSIPSSLLTLPRLTFLDLGYNQLSGRIP-NAFQMSNKFQKLDLSHNKIEG 345
Cdd:PLN00113 56 DVCLWQG---ITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPdDIFTTSSSLRYLNLSNNNFTG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 346 VVPT-SISNLQQlihLDLGWNSFSDQIPSSLSNLQQLIHLDLGSNSFSGQILSSFSNLQQLIHLDLGWNSFSGQIPFSLS 424
Cdd:PLN00113 133 SIPRgSIPNLET---LDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELG 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 425 NLQQLIHLDISSNAFSGPIPDVFGGMTKLQELDLDYNKLEGQIPSSLFNLTQLVALGCSNNKLDGPLPNKITGFQKLTNL 504
Cdd:PLN00113 210 QMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISL 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 505 RLNDNLINGTIPSSLLSY-SLDTLVLSNNRLQGNIPECIFSLTKLDELDLSSNNLSGVVNFKLfSKFADLEILSLSRNSq 583
Cdd:PLN00113 290 DLSDNSLSGEIPELVIQLqNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNL-GKHNNLTVLDLSTNN- 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 584 LSLKFESNVTYSfTNLqilklssVNLIEFHN-LQGEFP-------SLSHLDLSKNKLNGRMPNWflgniywqsvdlshnl 655
Cdd:PLN00113 368 LTGEIPEGLCSS-GNL-------FKLILFSNsLEGEIPkslgacrSLRRVRLQDNSFSGELPSE---------------- 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 656 FTSIdQFINLnaseisvLDLSFNLLNGEIPLAVCDISSLEFLNLGNNNLTGVIPQcLAESPFLYVLNLQMNKFHGTLPSN 735
Cdd:PLN00113 424 FTKL-PLVYF-------LDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPD-SFGSKRLENLDLSRNQFSGAVPRK 494
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 736 FSKESRIVSLNLYGNQLEGHFPKSLSRCKKLAFLNLGSNRIEDSFPDWLQTLPDLKVLVLRDNKLHGPI-ENL-KIEhlf 813
Cdd:PLN00113 495 LGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIpKNLgNVE--- 571
|
570
....*....|....*...
gi 1995123762 814 pSLIIFDISGNSFSGFLP 831
Cdd:PLN00113 572 -SLVQVNISHNHLHGSLP 588
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
86-470 |
3.67e-49 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 189.67 E-value: 3.67e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 86 LNLGCEGLQGILhPNStLFHLVHLQTLNLVYNNFSGsRFHSKFGGFQSLTHLYLSYSNIYGEIPTQISYLSKLQSLYLSG 165
Cdd:PLN00113 169 LDLGGNVLVGKI-PNS-LTNLTSLEFLTLASNQLVG-QIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVY 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 166 NELVlKEITLNrlLQNATDLQELFLYRTNMSSIRPNS--------------------FPLLFNQSSSLVILSLKATELSG 225
Cdd:PLN00113 246 NNLT-GPIPSS--LGNLKNLQYLFLYQNKLSGPIPPSifslqklisldlsdnslsgeIPELVIQLQNLEILHLFSNNFTG 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 226 NLKNNFLCLPSIQELYMSDNpNFEGQLP-ELSCSISLRILDLSVCQFQGKIPISFSNLAHLTSLILSSNRLNGSIPSSL- 303
Cdd:PLN00113 323 KIPVALTSLPRLQVLQLWSN-KFSGEIPkNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLg 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 304 -----------------------LTLPRLTFLDLGYNQLSGRIPNAFQMSNKFQKLDLSHNKIEGVVPTSiSNLQQLIHL 360
Cdd:PLN00113 402 acrslrrvrlqdnsfsgelpsefTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDS-FGSKRLENL 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 361 DLGWNSFSDQIPSSLSNLQQLIHLDLGSNSFSGQILSSFSNLQQLIHLDLGWNSFSGQIPFSLSNLQQLIHLDISSNAFS 440
Cdd:PLN00113 481 DLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLS 560
|
410 420 430
....*....|....*....|....*....|
gi 1995123762 441 GPIPDVFGGMTKLQELDLDYNKLEGQIPSS 470
Cdd:PLN00113 561 GEIPKNLGNVESLVQVNISHNHLHGSLPST 590
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
240-651 |
5.66e-26 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 111.95 E-value: 5.66e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 240 LYMSDNPNFEGQLPELSCSISLRILDLSVCQFQGKIPISFSNLAHLTSLILSSNRLNGSIPSSLLTLPRLTFLDLGYNQL 319
Cdd:COG4886 5 LLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 320 SGRIPNAFQMSNKFQKLDLSHNKiegvvptSISNLQQLIHLDLGWNSFSDqIPSSLSNLQQLIHLDLGSNSFSgQILSSF 399
Cdd:COG4886 85 LLLGLTDLGDLTNLTELDLSGNE-------ELSNLTNLESLDLSGNQLTD-LPEELANLTNLKELDLSNNQLT-DLPEPL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 400 SNLQQLIHLDLGWNSFSGqIPFSLSNLQQLIHLDISSNAFSgPIPDVFGGMTKLQELDLDYNKLEgQIPSSLFNLTQLVA 479
Cdd:COG4886 156 GNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQIT-DLPEPLGNLTNLEELDLSGNQLT-DLPEPLANLTNLET 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 480 LGCSNNKLDgPLPNkITGFQKLTNLRLNDNLINgTIPSSLLSYSLDTLVLSNNRLQGNIPECIFSLTKLDELDLSSNNLS 559
Cdd:COG4886 233 LDLSNNQLT-DLPE-LGNLTNLEELDLSNNQLT-DLPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLN 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 560 GVVNFKLFSKFADLEILSLSRNSQLSLKFESNVTYSFTNLQILKLSSVNLIEFHNLQGEFPSLSHLDLSKNKLNGRMPNW 639
Cdd:COG4886 310 LLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTL 389
|
410
....*....|..
gi 1995123762 640 FLGNIYWQSVDL 651
Cdd:COG4886 390 LLLLLTTTAGVL 401
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
892-1006 |
5.46e-19 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 92.57 E-value: 5.46e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 892 IDLSRNKFEGEITNAIGELHALKGLNLSRNRLTGHIPNSIGNLAYLESLDLSSNMLTSVIPAELTNLGFLEVLDISNNHL 971
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1995123762 972 VGEIP--------QGKQFNtFTNdsyegNSGLCGLPLSKKCGP 1006
Cdd:PLN03150 503 SGRVPaalggrllHRASFN-FTD-----NAGLCGIPGLRACGP 539
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
502-924 |
7.20e-16 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 81.13 E-value: 7.20e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 502 TNLRLNDNLINGTIPSSLLSYSLDTLVLSNNRLQGNIPECIFSLTKLDELDLSSNNLSGVVNFKLFSKFADLEILSLSRN 581
Cdd:COG4886 1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 582 SQLSLKFESNVTYSFTNLQILKLSSVNLIefhnlqGEFPSLSHLDLSKNKLNgrmpnwflgniywqsvdlshNLFTSIDQ 661
Cdd:COG4886 81 LLSLLLLGLTDLGDLTNLTELDLSGNEEL------SNLTNLESLDLSGNQLT--------------------DLPEELAN 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 662 FINLNaseisVLDLSFNLLNgEIPLAVCDISSLEFLNLGNNNLTGvIPQCLAESPFLYVLNLQMNKFHgTLPSNFSKESR 741
Cdd:COG4886 135 LTNLK-----ELDLSNNQLT-DLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQIT-DLPEPLGNLTN 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 742 IVSLNLYGNQLEgHFPKSLSRCKKLAFLNLGSNRIEDsFPdWLQTLPDLKVLVLRDNKlhgpIENLKIEHLFPSLIIFDI 821
Cdd:COG4886 207 LEELDLSGNQLT-DLPEPLANLTNLETLDLSNNQLTD-LP-ELGNLTNLEELDLSNNQ----LTDLPPLANLTNLKTLDL 279
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 822 SGNSFSGFLPKAYLKNYEAMKNVTQLIGDSNLQYMDKPFDMSYTEYSDSVTVEIKGNKMTLVKIPIKLVSIDLSRNKFEG 901
Cdd:COG4886 280 SNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLL 359
|
410 420
....*....|....*....|...
gi 1995123762 902 EITNAIGELHALKGLNLSRNRLT 924
Cdd:COG4886 360 SLLLTLLLTLGLLGLLEATLLTL 382
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
97-410 |
8.95e-14 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 74.58 E-value: 8.95e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 97 LHPNSTLFHLVHLQTLNLVYNNFSgsRFHSKFGGFQSLTHLYLSYSNIyGEIPTQISYLSKLQSLYLSGNELVlkeiTLN 176
Cdd:COG4886 103 LSGNEELSNLTNLESLDLSGNQLT--DLPEELANLTNLKELDLSNNQL-TDLPEPLGNLTNLKSLDLSNNQLT----DLP 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 177 RLLQNATDLQELFLYRTNMSSIrpnsfPLLFNQSSSLVILSL---KATELSGNLKNnflcLPSIQELYMSDNPNfeGQLP 253
Cdd:COG4886 176 EELGNLTNLKELDLSNNQITDL-----PEPLGNLTNLEELDLsgnQLTDLPEPLAN----LTNLETLDLSNNQL--TDLP 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 254 ELSCSISLRILDLSVCQFQGkIPISfSNLAHLTSLILSSNRLNGSIPSSLLTLPRLTFLDLGYNQLSGRIPNAFqmSNKF 333
Cdd:COG4886 245 ELGNLTNLEELDLSNNQLTD-LPPL-ANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLIL--LLLL 320
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1995123762 334 QKLDLSHNKIEGVVPTSISNLQQLIHLDLGWNSFSDQIPSSLSNLQQLIHLDLGSNSFSGQILSSFSNLQQLIHLDL 410
Cdd:COG4886 321 TTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTT 397
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
456-829 |
1.99e-13 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 73.81 E-value: 1.99e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 456 LDLDYNKLEGQIPSSLFNLTQLVALGCSNNKLDGPLPNKITGFQKLTNLRLNDNLINGTIPSSLLSYSLDTLVLSNNRLQ 535
Cdd:COG4886 6 LSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 536 GNIPECIFSLTKLDELDLSSNNLsgvvnfklFSKFADLEILSLSRNSQLSLKFEsnvTYSFTNLQILKLSSVNLIEFHNL 615
Cdd:COG4886 86 LLGLTDLGDLTNLTELDLSGNEE--------LSNLTNLESLDLSGNQLTDLPEE---LANLTNLKELDLSNNQLTDLPEP 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 616 QGEFPSLSHLDLSKNKLNgrmpnwflgniywqsvdlshNLFTSIDQFINLNaseisVLDLSFNLLNgEIPLAVCDISSLE 695
Cdd:COG4886 155 LGNLTNLKSLDLSNNQLT--------------------DLPEELGNLTNLK-----ELDLSNNQIT-DLPEPLGNLTNLE 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 696 FLNLGNNNLTgVIPQCLAESPFLYVLNLQMNKFHgTLPSnFSKESRIVSLNLYGNQLEGhfPKSLSRCKKLAFLNLGSNR 775
Cdd:COG4886 209 ELDLSGNQLT-DLPEPLANLTNLETLDLSNNQLT-DLPE-LGNLTNLEELDLSNNQLTD--LPPLANLTNLKTLDLSNNQ 283
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1995123762 776 IEDSFPDWLQTLPDLKVLVLRDNKLHGPIENLKIEHLFPSLIIFDISGNSFSGF 829
Cdd:COG4886 284 LTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTL 337
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
384-471 |
8.84e-13 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 72.54 E-value: 8.84e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 384 LDLGSNSFSGQILSSFSNLQQLIHLDLGWNSFSGQIPFSLSNLQQLIHLDISSNAFSGPIPDVFGGMTKLQELDLDYNKL 463
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
....*...
gi 1995123762 464 EGQIPSSL 471
Cdd:PLN03150 503 SGRVPAAL 510
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
479-562 |
1.13e-12 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 72.16 E-value: 1.13e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 479 ALGCSNNKLDGPLPNKITGFQKLTNLRLNDNLINGTIPSSLLSY-SLDTLVLSNNRLQGNIPECIFSLTKLDELDLSSNN 557
Cdd:PLN03150 422 GLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSItSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNS 501
|
....*
gi 1995123762 558 LSGVV 562
Cdd:PLN03150 502 LSGRV 506
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
408-497 |
2.02e-12 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 71.39 E-value: 2.02e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 408 LDLGWNSFSGQIPFSLSNLQQLIHLDISSNAFSGPIPDVFGGMTKLQELDLDYNKLEGQIPSSLFNLTQLVALGCSNNKL 487
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
90
....*....|
gi 1995123762 488 DGPLPNKITG 497
Cdd:PLN03150 503 SGRVPAALGG 512
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
264-359 |
5.28e-12 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 69.84 E-value: 5.28e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 264 LDLSVCQFQGKIPISFSNLAHLTSLILSSNRLNGSIPSSLLTLPRLTFLDLGYNQLSGRIPNAFQMSNKFQKLDLSHNKI 343
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
90
....*....|....*.
gi 1995123762 344 EGVVPTSISNLqqLIH 359
Cdd:PLN03150 503 SGRVPAALGGR--LLH 516
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
244-326 |
8.84e-12 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 69.07 E-value: 8.84e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 244 DNPNFEGQLP-ELSCSISLRILDLSVCQFQGKIPISFSNLAHLTSLILSSNRLNGSIPSSLLTLPRLTFLDLGYNQLSGR 322
Cdd:PLN03150 426 DNQGLRGFIPnDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGR 505
|
....
gi 1995123762 323 IPNA 326
Cdd:PLN03150 506 VPAA 509
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
312-407 |
1.26e-11 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 68.69 E-value: 1.26e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 312 LDLGYNQLSGRIPNAFQMSNKFQKLDLSHNKIEGVVPTSISNLQQLIHLDLGWNSFSDQIPSSLSNLQQLIHLDLGSNSF 391
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
90
....*....|....*.
gi 1995123762 392 SGQILSSFSNLqqLIH 407
Cdd:PLN03150 503 SGRVPAALGGR--LLH 516
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
571-989 |
1.46e-11 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 67.65 E-value: 1.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 571 ADLEILSLSRNSQLSLKFESNVTYSFTNLQILKLSSVNLIEFHNLQGEFPSLSHLDLSKNKLNGRMPNWFLGNIYWQSVD 650
Cdd:COG4886 1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 651 LSHNLFTSIDQFINLnaSEISVLDLSFNLlngeiplAVCDISSLEFLNLGNNNLTgVIPQCLAESPFLYVLNLQMNKFHg 730
Cdd:COG4886 81 LLSLLLLGLTDLGDL--TNLTELDLSGNE-------ELSNLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLT- 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 731 TLPSNFSKESRIVSLNLYGNQLEGhFPKSLSRCKKLAFLNLGSNRIEDsFPDWLQTLPDLKVLVLRDNKLH---GPIENL 807
Cdd:COG4886 150 DLPEPLGNLTNLKSLDLSNNQLTD-LPEELGNLTNLKELDLSNNQITD-LPEPLGNLTNLEELDLSGNQLTdlpEPLANL 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 808 KiehlfpSLIIFDISGNSFSGFLPKAYLKNyeamknvtqligdsnlqymdkpfdmsyteysdsvtveikgnkmtlvkipi 887
Cdd:COG4886 228 T------NLETLDLSNNQLTDLPELGNLTN-------------------------------------------------- 251
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 888 kLVSIDLSRNKFEGeiTNAIGELHALKGLNLSRNRLTGHIPNSIGNLAYLESLDLSSNMLTSVIPAELTNLGFLEVLDIS 967
Cdd:COG4886 252 -LEELDLSNNQLTD--LPPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLL 328
|
410 420
....*....|....*....|..
gi 1995123762 968 NNHLVGEIPQGKQFNTFTNDSY 989
Cdd:COG4886 329 LLKGLLVTLTTLALSLSLLALL 350
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
57-168 |
4.64e-11 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 66.76 E-value: 4.64e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 57 PSTTTWkNGTDCCS----WNGVTC--DTISGR--VIGLNLGCEGLQGILhPNsTLFHLVHLQTLNLVYNNFSGSRFHSkF 128
Cdd:PLN03150 387 PLRFGW-NGDPCVPqqhpWSGADCqfDSTKGKwfIDGLGLDNQGLRGFI-PN-DISKLRHLQSINLSGNSIRGNIPPS-L 462
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1995123762 129 GGFQSLTHLYLSYSNIYGEIPTQISYLSKLQSLYLSGNEL 168
Cdd:PLN03150 463 GSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
551-999 |
5.52e-11 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 66.11 E-value: 5.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 551 LDLSSNNLSGVVNFKLFSKFADLEILSLSRNSQLSLKFESNVTYSFTNLQILKLSSVNLIEFHNLQGEFPSLSHLDLSKN 630
Cdd:COG4886 3 LLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 631 KLNGRMPNWFLGNIYWQSVDLSHNLFTSidqfinlNASEISVLDLSFNLLNgEIPLAVCDISSLEFLNLGNNNLTgVIPQ 710
Cdd:COG4886 83 SLLLLGLTDLGDLTNLTELDLSGNEELS-------NLTNLESLDLSGNQLT-DLPEELANLTNLKELDLSNNQLT-DLPE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 711 CLAESPFLYVLNLQMNKFHgTLPSNFSKESRIVSLNLYGNQLEgHFPKSLSRCKKLAFLNLGSNRIEDsFPDWLQTLPDL 790
Cdd:COG4886 154 PLGNLTNLKSLDLSNNQLT-DLPEELGNLTNLKELDLSNNQIT-DLPEPLGNLTNLEELDLSGNQLTD-LPEPLANLTNL 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 791 KVLVLRDNKlhgpIENLKIEHLFPSLIIFDISGNSFSGFLPKAYLKNyeamknvtqligdsnlqymdkpfdmsyteysds 870
Cdd:COG4886 231 ETLDLSNNQ----LTDLPELGNLTNLEELDLSNNQLTDLPPLANLTN--------------------------------- 273
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 871 vtveikgnkmtlvkipikLVSIDLSRNKFEGEITNAIGELHALKGLNLSRNRLTGHIPNSIGNLAYLESLDLSSNMLTSV 950
Cdd:COG4886 274 ------------------LKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLV 335
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1995123762 951 IPAELTNLGFLEVLDISNNHLVGEIPQGKQFNTFTNDSYEGNSGLCGLP 999
Cdd:COG4886 336 TLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLAL 384
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
370-449 |
8.52e-11 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 65.99 E-value: 8.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 370 QIPSSLSNLQQLIHLDLGSNSFSGQILSSFSNLQQLIHLDLGWNSFSGQIPFSLSNLQQLIHLDISSNAFSGPIPDVFGG 449
Cdd:PLN03150 433 FIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGG 512
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
336-431 |
2.33e-10 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 64.45 E-value: 2.33e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 336 LDLSHNKIEGVVPTSISNLQQLIHLDLGWNSFSDQIPSSLSNLQQLIHLDLGSNSFSGQILSSFSNLQQLIHLDLGWNSF 415
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
90
....*....|....*.
gi 1995123762 416 SGQIPFSLSNLqqLIH 431
Cdd:PLN03150 503 SGRVPAALGGR--LLH 516
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
432-519 |
1.68e-09 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 61.76 E-value: 1.68e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 432 LDISSNAFSGPIPDVFGGMTKLQELDLDYNKLEGQIPSSLFNLTQLVALGCSNNKLDGPLPNKITGFQKLTNLRLNDNLI 511
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
....*...
gi 1995123762 512 NGTIPSSL 519
Cdd:PLN03150 503 SGRVPAAL 510
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
670-760 |
7.81e-09 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 59.83 E-value: 7.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 670 ISVLDLSFNLLNGEIPLAVCDISSLEFLNLGNNNLTGVIPQCLAESPFLYVLNLQMNKFHGTLPSNFSKESRIVSLNLYG 749
Cdd:PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499
|
90
....*....|.
gi 1995123762 750 NQLEGHFPKSL 760
Cdd:PLN03150 500 NSLSGRVPAAL 510
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
261-463 |
6.22e-08 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 55.82 E-value: 6.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 261 LRILDLSVCQFQGKIPISFSNLAHLTSL---ILSSNRLNGS----IPSSLLTL-PRLTFLDLGYNQLSGR----IPNAFQ 328
Cdd:cd00116 83 LQELDLSDNALGPDGCGVLESLLRSSSLqelKLNNNGLGDRglrlLAKGLKDLpPALEKLVLGRNRLEGAsceaLAKALR 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 329 MSNKFQKLDLSHNKI--EGVVPT--SISNLQQLIHLDLGWNSFSD----QIPSSLSNLQQLIHLDLGSNSFSGQILSSFS 400
Cdd:cd00116 163 ANRDLKELNLANNGIgdAGIRALaeGLKANCNLEVLDLNNNGLTDegasALAETLASLKSLEVLNLGDNNLTDAGAAALA 242
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1995123762 401 N-----LQQLIHLDLGWNSFSgqipfslsnlqqlihlDISSNAFSGPIPDvfggMTKLQELDLDYNKL 463
Cdd:cd00116 243 SallspNISLLTLSLSCNDIT----------------DDGAKDLAEVLAE----KESLLELDLRGNKF 290
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
721-802 |
1.67e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 55.21 E-value: 1.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 721 LNLQMNKFHGTLPSNFSKESRIVSLNLYGNQLEGHFPKSLSRCKKLAFLNLGSNRIEDSFPDWLQTLPDLKVLVLRDNKL 800
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
..
gi 1995123762 801 HG 802
Cdd:PLN03150 503 SG 504
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
206-413 |
1.69e-07 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 55.18 E-value: 1.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 206 LFNQSSSLVILSLKATELSG--NLKNNFLCLPSIQELYMSDNPNFEGQLPE----LSCSISLRILDLSVCQF--QGKIPI 277
Cdd:COG5238 177 LQNNSVETVYLGCNQIGDEGieELAEALTQNTTVTTLWLKRNPIGDEGAEIlaeaLKGNKSLTTLDLSNNQIgdEGVIAL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 278 sFSNLAH---LTSLILSSNRL--NG--SIPSSLLTLPRLTFLDLGYNQLSGR----IPNAFQMSNKFQKLDLSHNKI--E 344
Cdd:COG5238 257 -AEALKNnttVETLYLSGNQIgaEGaiALAKALQGNTTLTSLDLSVNRIGDEgaiaLAEGLQGNKTLHTLNLAYNGIgaQ 335
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1995123762 345 GVVP--TSISNLQQLIHLDLGWNSFSDQ----IPSSLSNLQQLIHLDLGSNSFSGQ---ILSSFSNLQQLIHLDLGWN 413
Cdd:COG5238 336 GAIAlaKALQENTTLHSLDLSDNQIGDEgaiaLAKYLEGNTTLRELNLGKNNIGKQgaeALIDALQTNRLHTLILDGN 413
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
742-833 |
5.31e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 53.67 E-value: 5.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 742 IVSLNLYGNQLEGHFPKSLSRCKKLAFLNLGSNRIEDSFPDWLQTLPDLKVLVLRDNKLHGPI-ENLKiehLFPSLIIFD 820
Cdd:PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIpESLG---QLTSLRILN 496
|
90
....*....|...
gi 1995123762 821 ISGNSFSGFLPKA 833
Cdd:PLN03150 497 LNGNSLSGRVPAA 509
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
216-307 |
6.63e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 53.28 E-value: 6.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 216 LSLKATELSGNLKNNFLCLPSIQELYMSDNpNFEGQLPELSCSI-SLRILDLSVCQFQGKIPISFSNLAHLTSLILSSNR 294
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGN-SIRGNIPPSLGSItSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNS 501
|
90
....*....|...
gi 1995123762 295 LNGSIPSSLLTLP 307
Cdd:PLN03150 502 LSGRVPAALGGRL 514
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
283-495 |
7.06e-07 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 53.55 E-value: 7.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 283 AHLTSLILSSNRLNgSIPSsllTLP-RLTFLDLGYN---QLSGRIPNAFQmsnkfqKLDLSHNKIEGVVPTSISNLQQLI 358
Cdd:PRK15370 220 GNIKTLYANSNQLT-SIPA---TLPdTIQEMELSINritELPERLPSALQ------SLDLFHNKISCLPENLPEELRYLS 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 359 HLDLGWNSFSDQIPSSlsnlqqLIHLDLGSNSFSGQILSSFSNLQQLIHLDLGWNSFSGQIPFSLSNlqqlihLDISSNA 438
Cdd:PRK15370 290 VYDNSIRTLPAHLPSG------ITHLNVQSNSLTALPETLPPGLKTLEAGENALTSLPASLPPELQV------LDVSKNQ 357
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1995123762 439 FSgPIPDVFGgmTKLQELDLDYNKLEgQIPSSLFNLTQLvaLGCSNNKL------------DGPLPNKI 495
Cdd:PRK15370 358 IT-VLPETLP--PTITTLDVSRNALT-NLPENLPAALQI--MQASRNNLvrlpeslphfrgEGPQPTRI 420
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
622-716 |
8.49e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 53.28 E-value: 8.49e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 622 LSHLDLSKNKLNGRMPNWFLGNIYWQSVDLSHNlftSIDQFINL---NASEISVLDLSFNLLNGEIPLAVCDISSLEFLN 698
Cdd:PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGN---SIRGNIPPslgSITSLEVLDLSYNSFNGSIPESLGQLTSLRILN 496
|
90
....*....|....*...
gi 1995123762 699 LGNNNLTGVIPQCLAESP 716
Cdd:PLN03150 497 LNGNSLSGRVPAALGGRL 514
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
354-633 |
1.03e-06 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 51.97 E-value: 1.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 354 LQQLIHLDLGWNSFSD----QIPSSLSNLQQLIHLDLGSNsFSGQILSsfsNLQQLIHldlgwnsfsgqipfSLSNLQQL 429
Cdd:cd00116 22 LLCLQVLRLEGNTLGEeaakALASALRPQPSLKELCLSLN-ETGRIPR---GLQSLLQ--------------GLTKGCGL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 430 IHLDISSNAFSGPIPDVFGGMTK---LQELDLDYNKLEGQI--------PSSLFNLTQLValgCSNNKLDG----PLPNK 494
Cdd:cd00116 84 QELDLSDNALGPDGCGVLESLLRsssLQELKLNNNGLGDRGlrllakglKDLPPALEKLV---LGRNRLEGasceALAKA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 495 ITGFQKLTNLRLNDNLING----TIPSSLLSYS-LDTLVLSNNRLQ----GNIPECIFSLTKLDELDLSSNNLSgvvnfk 565
Cdd:cd00116 161 LRANRDLKELNLANNGIGDagirALAEGLKANCnLEVLDLNNNGLTdegaSALAETLASLKSLEVLNLGDNNLT------ 234
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1995123762 566 lfskfaDLEILSLSrnSQLSLKFESNVTYSFTNLQILKLSSVNLIEFhnlQGEFPSLSHLDLSKNKLN 633
Cdd:cd00116 235 ------DAGAAALA--SALLSPNISLLTLSLSCNDITDDGAKDLAEV---LAEKESLLELDLRGNKFG 291
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
697-788 |
2.21e-06 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 51.74 E-value: 2.21e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 697 LNLGNNNLTGVIPQCLAESPFLYVLNLQMNKFHGTLPSNFSKESRIVSLNLYGNQLEGHFPKSLSRCKKLAFLNLGSNRI 776
Cdd:PLN03150 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSL 502
|
90
....*....|..
gi 1995123762 777 EDSFPDWLQTLP 788
Cdd:PLN03150 503 SGRVPAALGGRL 514
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
423-581 |
4.22e-06 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 49.01 E-value: 4.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 423 LSNLQQLIHLDISSNAFSgpIPDVFGGMTKLQELDLDYNK---LEGqipssLFNLTQLVALGCSNNKLDGPLPnkitgfq 499
Cdd:cd21340 42 LEFLTNLTHLYLQNNQIE--KIENLENLVNLKKLYLGGNRisvVEG-----LENLTNLEELHIENQRLPPGEK------- 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 500 kltnLRLNDNLINGtipsslLSYSLDTLVLSNNRLQgnIPECIFSLTKLDELDLSSNNLSGVVNFK-LFSKFADLEILSL 578
Cdd:cd21340 108 ----LTFDPRSLAA------LSNSLRVLNISGNNID--SLEPLAPLRNLEQLDASNNQISDLEELLdLLSSWPSLRELDL 175
|
...
gi 1995123762 579 SRN 581
Cdd:cd21340 176 TGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
284-343 |
4.46e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.82 E-value: 4.46e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 284 HLTSLILSSNRLNGSIPSSLLTLPRLTFLDLGYNQLSGRIPNAFQMSNKFQKLDLSHNKI 343
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
128-267 |
4.67e-06 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 49.01 E-value: 4.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 128 FGGFQSLTHLYLSYSNIYgEIPtQISYLSKLQSLYLSGNEL-VLKEitlnrlLQNATDLQELFLYRTNMssirPNSFPLL 206
Cdd:cd21340 42 LEFLTNLTHLYLQNNQIE-KIE-NLENLVNLKKLYLGGNRIsVVEG------LENLTNLEELHIENQRL----PPGEKLT 109
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1995123762 207 FNQSSSLVIL-SLKATELSGN----LKnNFLCLPSIQELYMSDNP--NFEGQLPELSCSISLRILDLS 267
Cdd:cd21340 110 FDPRSLAALSnSLRVLNISGNnidsLE-PLAPLRNLEQLDASNNQisDLEELLDLLSSWPSLRELDLT 176
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
913-971 |
1.48e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 43.67 E-value: 1.48e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 1995123762 913 LKGLNLSRNRLTGHIPNSIGNLAYLESLDLSSNMLTSVIPAELTNLGFLEVLDISNNHL 971
Cdd:pfam13855 3 LRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
131-314 |
1.61e-05 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 47.09 E-value: 1.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 131 FQSLTHLYLSYSNIYgEIPTqISYLSKLQSLYLSGNelvlkEITLNRLLQNATDLQELFLYRTNMSSIRPnsfpllFNQS 210
Cdd:cd21340 1 LKRITHLYLNDKNIT-KIDN-LSLCKNLKVLYLYDN-----KITKIENLEFLTNLTHLYLQNNQIEKIEN------LENL 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 211 SSLVILSLKATELS--GNLKNnflcLPSIQELYMSDNPNFEGQL----PELSCSI--SLRILDLSVCQFQgkIPISFSNL 282
Cdd:cd21340 68 VNLKKLYLGGNRISvvEGLEN----LTNLEELHIENQRLPPGEKltfdPRSLAALsnSLRVLNISGNNID--SLEPLAPL 141
|
170 180 190
....*....|....*....|....*....|....
gi 1995123762 283 AHLTSLILSSNRLN--GSIPSSLLTLPRLTFLDL 314
Cdd:cd21340 142 RNLEQLDASNNQISdlEELLDLLSSWPSLRELDL 175
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
240-394 |
2.35e-05 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 46.70 E-value: 2.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 240 LYMSDNpNFEgQLPELSCSISLRILDLSVCQFQgKIPiSFSNLAHLTSLILSSNRLNgSIPSsLLTLPRLTFLDLGYNQL 319
Cdd:cd21340 7 LYLNDK-NIT-KIDNLSLCKNLKVLYLYDNKIT-KIE-NLEFLTNLTHLYLQNNQIE-KIEN-LENLVNLKKLYLGGNRI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 320 S---G---------------RIPNAFQM----------SNKFQKLDLSHNKIEGVvpTSISNLQQLIHLDLGWNSFSD-- 369
Cdd:cd21340 81 SvveGlenltnleelhienqRLPPGEKLtfdprslaalSNSLRVLNISGNNIDSL--EPLAPLRNLEQLDASNNQISDle 158
|
170 180
....*....|....*....|....*
gi 1995123762 370 QIPSSLSNLQQLIHLDLGSNSFSGQ 394
Cdd:cd21340 159 ELLDLLSSWPSLRELDLTGNPVCKK 183
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
307-638 |
2.76e-05 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 48.33 E-value: 2.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 307 PRLTFLDL-GYNqlSGRIPNAFQMSNkFQKLDLSHNKIEGVVpTSISNLQQLIHLDLGWNSFSDQIPSsLSNLQQLIHLD 385
Cdd:PLN03210 589 PKLRLLRWdKYP--LRCMPSNFRPEN-LVKLQMQGSKLEKLW-DGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLK 663
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 386 LGSNSFSGQILSSFSNLQQLIHLDLGWNSFSGQIPFSLsNLQQLIHLDISSNAFSGPIPDVfggMTKLQELDLDYNKLEg 465
Cdd:PLN03210 664 LSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE- 738
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 466 QIPSSLfNLTQLVALGCSNNKlDGPLPNKItgfQKLTNLRlndnlingtipsSLLSYSLDTLVLSNNRLQGNIPECIFSL 545
Cdd:PLN03210 739 EFPSNL-RLENLDELILCEMK-SEKLWERV---QPLTPLM------------TMLSPSLTRLFLSDIPSLVELPSSIQNL 801
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 546 TKLDELDLSS-NNLSGV---VNFKLfskfadLEILSLSRNSQlsLKFESNVTysfTNLQILKLSSVNLIEFHNLQGEFPS 621
Cdd:PLN03210 802 HKLEHLEIENcINLETLptgINLES------LESLDLSGCSR--LRTFPDIS---TNISDLNLSRTGIEEVPWWIEKFSN 870
|
330
....*....|....*...
gi 1995123762 622 LSHLDLSK-NKLNGRMPN 638
Cdd:PLN03210 871 LSFLDMNGcNNLQRVSLN 888
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
260-319 |
4.10e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 42.13 E-value: 4.10e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 260 SLRILDLSVCQFQGKIPISFSNLAHLTSLILSSNRLNGSIPSSLLTLPRLTFLDLGYNQL 319
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
499-558 |
1.23e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 40.97 E-value: 1.23e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1995123762 499 QKLTNLRLNDNLINGTIPSSLLS-YSLDTLVLSNNRLQGNIPECIFSLTKLDELDLSSNNL 558
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGlSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
133-430 |
1.74e-04 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 46.02 E-value: 1.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 133 SLTHLYLSYSNIYGEIPTQISYLSKLQSLYLSGNELVlkeitlnRLLQNATDLQElfLYRTNMSSI-RPNSFPLLFNQSS 211
Cdd:PLN03210 658 NLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENL-------EILPTGINLKS--LYRLNLSGCsRLKSFPDISTNIS 728
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 212 SLVILSLKATELSGNLK-----NNFLCLPSIQELYMSDNPnfegQLPELS-CSISLRILDLSVCQFQGKIPISFSNLAHL 285
Cdd:PLN03210 729 WLDLDETAIEEFPSNLRlenldELILCEMKSEKLWERVQP----LTPLMTmLSPSLTRLFLSDIPSLVELPSSIQNLHKL 804
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 286 TSLILSSNRLNGSIPSSlLTLPRLTFLDL-GYNQLSgRIPNafqMSNKFQKLDLSHNKIEGvVPTSISNLQQLIHLDLGW 364
Cdd:PLN03210 805 EHLEIENCINLETLPTG-INLESLESLDLsGCSRLR-TFPD---ISTNISDLNLSRTGIEE-VPWWIEKFSNLSFLDMNG 878
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1995123762 365 NSFSDQIPSSLSNLQQLIHLDlgsnsfsgqilssFSNLQQLIHLDlgWNSFSGQIPFSLSNLQQLI 430
Cdd:PLN03210 879 CNNLQRVSLNISKLKHLETVD-------------FSDCGALTEAS--WNGSPSEVAMATDNIHSKL 929
|
|
| PLN03210 |
PLN03210 |
Resistant to P. syringae 6; Provisional |
251-484 |
1.99e-04 |
|
Resistant to P. syringae 6; Provisional
Pssm-ID: 215633 [Multi-domain] Cd Length: 1153 Bit Score: 45.64 E-value: 1.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 251 QLPELSCSISLRILDLSVCQFQGKIPISFSNLAHLTSLILSSNRLNGSIPS--SLLTLPRLtfldlgynQLSG--RIPNA 326
Cdd:PLN03210 649 EIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTgiNLKSLYRL--------NLSGcsRLKSF 720
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 327 FQMSNKFQKLDLSHNKIEGvVPTS--ISNLQQLIHLDLGWNSFSDQIPSSLSNLQQLIH----LDLGSNSFSGQILSSFS 400
Cdd:PLN03210 721 PDISTNISWLDLDETAIEE-FPSNlrLENLDELILCEMKSEKLWERVQPLTPLMTMLSPsltrLFLSDIPSLVELPSSIQ 799
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 401 NLQQLIHLDLgWNSFSGQIPFSLSNLQQLIHLDISSNAFSGPIPDVfggMTKLQELDLDYNKLEgQIPSSLFNLTQLVAL 480
Cdd:PLN03210 800 NLHKLEHLEI-ENCINLETLPTGINLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFL 874
|
....*..
gi 1995123762 481 ---GCSN 484
Cdd:PLN03210 875 dmnGCNN 881
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
523-581 |
2.14e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 40.20 E-value: 2.14e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 1995123762 523 SLDTLVLSNNRLQGNIPECIFSLTKLDELDLSSNNLSgVVNFKLFSKFADLEILSLSRN 581
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLT-TLSPGAFSGLPSLRYLDLSGN 59
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
403-463 |
2.38e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 40.20 E-value: 2.38e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1995123762 403 QQLIHLDLGWNSFSGQIPFSLSNLQQLIHLDISSNAFSGPIPDVFGGMTKLQELDLDYNKL 463
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
524-637 |
2.58e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 45.19 E-value: 2.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 524 LDTLVLSNNRLQGNIPECIFSLTKLDELDLSSNNLSGVVNFKLFSkFADLEILSLSRNSqlslkFESNVTYSFtnlqilk 603
Cdd:PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGS-ITSLEVLDLSYNS-----FNGSIPESL------- 486
|
90 100 110
....*....|....*....|....*....|....
gi 1995123762 604 lssvnliefhnlqGEFPSLSHLDLSKNKLNGRMP 637
Cdd:PLN03150 487 -------------GQLTSLRILNLNGNSLSGRVP 507
|
|
| RNA1 |
COG5238 |
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ... |
454-776 |
2.65e-04 |
|
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444072 [Multi-domain] Cd Length: 434 Bit Score: 44.78 E-value: 2.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 454 QELDLDYNKLEGQIPSSLFNLTQLVALGCSNNKLDGplpNKIT--GFQKLTNLRLNDNLINGT-IPSSLLSYSLDTLVLS 530
Cdd:COG5238 88 QLLVVDWEGAEEVSPVALAETATAVATPPPDLRRIM---AKTLedSLILYLALPRRINLIQVLkDPLGGNAVHLLGLAAR 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 531 NNRLQGNIPECIFSLTKLDELDLSSNNLsGVVNFKLFSKfadleilSLSRNSQLSlkfesnvTYSFTNLQILKLSSVNLI 610
Cdd:COG5238 165 LGLLAAISMAKALQNNSVETVYLGCNQI-GDEGIEELAE-------ALTQNTTVT-------TLWLKRNPIGDEGAEILA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 611 EFhnLQGEfPSLSHLDLSKNKLngrmpnwflgniywqSVDLSHNLFTSIDqfinlNASEISVLDLSFNLL--NGEIPLA- 687
Cdd:COG5238 230 EA--LKGN-KSLTTLDLSNNQI---------------GDEGVIALAEALK-----NNTTVETLYLSGNQIgaEGAIALAk 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 688 -VCDISSLEFLNLGNNNLTG----VIPQCLAESPFLYVLNLQMNKFHGT----LPSNFSKESRIVSLNLYGNQLEGH--- 755
Cdd:COG5238 287 aLQGNTTLTSLDLSVNRIGDegaiALAEGLQGNKTLHTLNLAYNGIGAQgaiaLAKALQENTTLHSLDLSDNQIGDEgai 366
|
330 340
....*....|....*....|..
gi 1995123762 756 -FPKSLSRCKKLAFLNLGSNRI 776
Cdd:COG5238 367 aLAKYLEGNTTLRELNLGKNNI 388
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
498-678 |
3.04e-04 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 43.24 E-value: 3.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 498 FQKLTNLRLNDNLINgTIPSSLLSYSLDTLVLSNNRLQgNIpECIFSLTKLDELDLSSNNLSGVVNFKLFSKfadLEILS 577
Cdd:cd21340 1 LKRITHLYLNDKNIT-KIDNLSLCKNLKVLYLYDNKIT-KI-ENLEFLTNLTHLYLQNNQIEKIENLENLVN---LKKLY 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 578 LSRNSQlslkfeSNVT--YSFTNLQILKLSSVNL-----IEF--HNLQGEFPSLSHLDLSKNKLNGRMPNWFLGNIywQS 648
Cdd:cd21340 75 LGGNRI------SVVEglENLTNLEELHIENQRLppgekLTFdpRSLAALSNSLRVLNISGNNIDSLEPLAPLRNL--EQ 146
|
170 180 190
....*....|....*....|....*....|..
gi 1995123762 649 VDLSHNLFTSIDQFINL--NASEISVLDLSFN 678
Cdd:cd21340 147 LDASNNQISDLEELLDLlsSWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
108-168 |
5.39e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 39.04 E-value: 5.39e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1995123762 108 HLQTLNLVYNNFSGSRfHSKFGGFQSLTHLYLSYSNIYGEIPTQISYLSKLQSLYLSGNEL 168
Cdd:pfam13855 2 NLRSLDLSNNRLTSLD-DGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
334-391 |
6.82e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 38.66 E-value: 6.82e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 1995123762 334 QKLDLSHNKIEGVVPTSISNLQQLIHLDLGWNSFSDQIPSSLSNLQQLIHLDLGSNSF 391
Cdd:pfam13855 4 RSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
427-487 |
8.31e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 38.66 E-value: 8.31e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1995123762 427 QQLIHLDISSNAFSGPIPDVFGGMTKLQELDLDYNKLEGQIPSSLFNLTQLVALGCSNNKL 487
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
307-367 |
1.01e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 38.27 E-value: 1.01e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1995123762 307 PRLTFLDLGYNQLSGRIPNAFQMSNKFQKLDLSHNKIEGVVPTSISNLQQLIHLDLGWNSF 367
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
888-947 |
1.08e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 38.27 E-value: 1.08e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 888 KLVSIDLSRNKFEGEITNAIGELHALKGLNLSRNRLTGHIPNSIGNLAYLESLDLSSNML 947
Cdd:pfam13855 2 NLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
282-559 |
1.21e-03 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 42.34 E-value: 1.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 282 LAHLTSLILSSNRLNGS----IPSSLLTLPRLTFLDLGYNQLsGRIPNAFQmsnkfqkldlshnkiegVVPTSISNLQQL 357
Cdd:cd00116 22 LLCLQVLRLEGNTLGEEaakaLASALRPQPSLKELCLSLNET-GRIPRGLQ-----------------SLLQGLTKGCGL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 358 IHLDLGWNSFSDQIPSSLSNLQQ---LIHLDLGSNSFSGQIL-----SSFSNLQQLIHLDLGWNSFSGQIPFSLSNL--- 426
Cdd:cd00116 84 QELDLSDNALGPDGCGVLESLLRsssLQELKLNNNGLGDRGLrllakGLKDLPPALEKLVLGRNRLEGASCEALAKAlra 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1995123762 427 -QQLIHLDISSNAFSGP-IPDVFGGM---TKLQELDLDYNKLEGQipsslfnltqlvalGCSnnKLDGPLPNKitgfQKL 501
Cdd:cd00116 164 nRDLKELNLANNGIGDAgIRALAEGLkanCNLEVLDLNNNGLTDE--------------GAS--ALAETLASL----KSL 223
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1995123762 502 TNLRLNDNLINGTIPSSLLS------YSLDTLVLSNNRL--QGNIPEC--IFSLTKLDELDLSSNNLS 559
Cdd:cd00116 224 EVLNLGDNNLTDAGAAALASallspnISLLTLSLSCNDItdDGAKDLAevLAEKESLLELDLRGNKFG 291
|
|
| LRRNT_2 |
pfam08263 |
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence ... |
57-77 |
1.93e-03 |
|
Leucine rich repeat N-terminal domain; Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.
Pssm-ID: 462411 [Multi-domain] Cd Length: 41 Bit Score: 36.89 E-value: 1.93e-03
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
647-704 |
3.53e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 36.73 E-value: 3.53e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 1995123762 647 QSVDLSHNLFTSIDQFINLNASEISVLDLSFNLLNGEIPLAVCDISSLEFLNLGNNNL 704
Cdd:pfam13855 4 RSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
913-971 |
5.93e-03 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 39.38 E-value: 5.93e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1995123762 913 LKGLNLSRNRLTghIPNSIGNLAYLESLDLSSNMLTSV--IPAELTNLGFLEVLDISNNHL 971
Cdd:cd21340 122 LRVLNISGNNID--SLEPLAPLRNLEQLDASNNQISDLeeLLDLLSSWPSLRELDLTGNPV 180
|
|
| |
