probable WRKY transcription factor 49 [Populus trichocarpa]
Protein Classification
WRKY transcription factor( domain architecture ID 10654900)
WRKY transcription factor is predominantly found in plants and is involved in multiple aspects of plant growth, development and stress response
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| WRKY | smart00774 | DNA binding domain; The WRKY domain is a DNA binding domain found in one or two copies in a ... |
115-171 | 7.62e-34 | ||
DNA binding domain; The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding. : Pssm-ID: 214815 Cd Length: 59 Bit Score: 117.97 E-value: 7.62e-34
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| Name | Accession | Description | Interval | E-value | ||
| WRKY | smart00774 | DNA binding domain; The WRKY domain is a DNA binding domain found in one or two copies in a ... |
115-171 | 7.62e-34 | ||
DNA binding domain; The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding. Pssm-ID: 214815 Cd Length: 59 Bit Score: 117.97 E-value: 7.62e-34
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| WRKY | pfam03106 | WRKY DNA -binding domain; |
116-171 | 4.36e-32 | ||
WRKY DNA -binding domain; Pssm-ID: 460808 Cd Length: 57 Bit Score: 113.34 E-value: 4.36e-32
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| Name | Accession | Description | Interval | E-value | ||
| WRKY | smart00774 | DNA binding domain; The WRKY domain is a DNA binding domain found in one or two copies in a ... |
115-171 | 7.62e-34 | ||
DNA binding domain; The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding. Pssm-ID: 214815 Cd Length: 59 Bit Score: 117.97 E-value: 7.62e-34
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| WRKY | pfam03106 | WRKY DNA -binding domain; |
116-171 | 4.36e-32 | ||
WRKY DNA -binding domain; Pssm-ID: 460808 Cd Length: 57 Bit Score: 113.34 E-value: 4.36e-32
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| Blast search parameters | ||||
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