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Conserved domains on  [gi|745753906|ref|XP_002172460|]
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hypothetical protein SJAG_01206 [Schizosaccharomyces japonicus yFS275]

Protein Classification

Tvp18 family protein( domain architecture ID 10562977)

Tvp18 family protein such as Tvp18 Golgi membrane proteins that are involved in vesicular trafficking and the calcium channel flower proteins, which form calcium channels that regulate synaptic endocytosis

PubMed:  17178117

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Cg6151-P pfam10233
Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue ...
 33-129 3.91e-26

Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue long, proteins which are named as CG6151-P proteins that are conserved from fungi to humans. The function is unknown. The fungal members have a characteriztic ICP sequence motif. Some members are annotated as putative clathrin-coated vesicle protein but this could not be defined.


:

Pssm-ID: 431157  Cd Length: 113  Bit Score: 94.90  E-value: 3.91e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745753906   33 ANLFHIKLV-VLFSALTLVEGVLLIFIEIPLLARVCPVSDKFQAFTNAFASNYYRALIYILFAVVTFLGCIFQNTSLIAA 111
Cdd:pfam10233  15 ANIFTFSVVcIIFGILCIVSGFIVLFIEVPFLLRICPTSDKFDAFIRKFETNWMRAAFYLVMAVVQWLSLCVFATSLIAG 94

                          90
                  ....*....|....*...
gi 745753906  112 GVVMALTALCYLLAGIRG 129
Cdd:pfam10233  95 AVLLFITGVCYGLAALGK 112
 
Name Accession Description Interval E-value
Cg6151-P pfam10233
Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue ...
 33-129 3.91e-26

Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue long, proteins which are named as CG6151-P proteins that are conserved from fungi to humans. The function is unknown. The fungal members have a characteriztic ICP sequence motif. Some members are annotated as putative clathrin-coated vesicle protein but this could not be defined.


Pssm-ID: 431157  Cd Length: 113  Bit Score: 94.90  E-value: 3.91e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745753906   33 ANLFHIKLV-VLFSALTLVEGVLLIFIEIPLLARVCPVSDKFQAFTNAFASNYYRALIYILFAVVTFLGCIFQNTSLIAA 111
Cdd:pfam10233  15 ANIFTFSVVcIIFGILCIVSGFIVLFIEVPFLLRICPTSDKFDAFIRKFETNWMRAAFYLVMAVVQWLSLCVFATSLIAG 94

                          90
                  ....*....|....*...
gi 745753906  112 GVVMALTALCYLLAGIRG 129
Cdd:pfam10233  95 AVLLFITGVCYGLAALGK 112
Cg6151-P smart01077
Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue ...
 33-129 1.37e-20

Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue long, proteins which are named as CG6151-P proteins that are conserved from fungi to humans. The function is unknown. The fungal members have a characteristic ICP sequence motif. Some members are annotated as putative clathrin-coated vesicle protein but this could not be defined.


Pssm-ID: 198145  Cd Length: 111  Bit Score: 80.77  E-value: 1.37e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745753906    33 ANLFHIKLV-VLFSALTLVEGVLLIFIEIPLLARVCPVSDKFQAFTNAFASNYYRALIYILFAVVTFLGCIfQNTSLIAA 111
Cdd:smart01077  14 ANIFHFSVVcIVFGILMIVQGFVLLFIEAPFLLKICPFSDKFAEFIDKFDTNWQRAAFYCGMAIVPILSCI-MLTSLLGV 92

                           90
                   ....*....|....*...
gi 745753906   112 GVVMALTALCYLLAGIRG 129
Cdd:smart01077  93 AIFFAITGVCYGLAALGK 110
 
Name Accession Description Interval E-value
Cg6151-P pfam10233
Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue ...
 33-129 3.91e-26

Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue long, proteins which are named as CG6151-P proteins that are conserved from fungi to humans. The function is unknown. The fungal members have a characteriztic ICP sequence motif. Some members are annotated as putative clathrin-coated vesicle protein but this could not be defined.


Pssm-ID: 431157  Cd Length: 113  Bit Score: 94.90  E-value: 3.91e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745753906   33 ANLFHIKLV-VLFSALTLVEGVLLIFIEIPLLARVCPVSDKFQAFTNAFASNYYRALIYILFAVVTFLGCIFQNTSLIAA 111
Cdd:pfam10233  15 ANIFTFSVVcIIFGILCIVSGFIVLFIEVPFLLRICPTSDKFDAFIRKFETNWMRAAFYLVMAVVQWLSLCVFATSLIAG 94

                          90
                  ....*....|....*...
gi 745753906  112 GVVMALTALCYLLAGIRG 129
Cdd:pfam10233  95 AVLLFITGVCYGLAALGK 112
Cg6151-P smart01077
Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue ...
 33-129 1.37e-20

Uncharacterized conserved protein CG6151-P; This is a family of small, less than 200 residue long, proteins which are named as CG6151-P proteins that are conserved from fungi to humans. The function is unknown. The fungal members have a characteristic ICP sequence motif. Some members are annotated as putative clathrin-coated vesicle protein but this could not be defined.


Pssm-ID: 198145  Cd Length: 111  Bit Score: 80.77  E-value: 1.37e-20
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 745753906    33 ANLFHIKLV-VLFSALTLVEGVLLIFIEIPLLARVCPVSDKFQAFTNAFASNYYRALIYILFAVVTFLGCIfQNTSLIAA 111
Cdd:smart01077  14 ANIFHFSVVcIVFGILMIVQGFVLLFIEAPFLLKICPFSDKFAEFIDKFDTNWQRAAFYCGMAIVPILSCI-MLTSLLGV 92

                           90
                   ....*....|....*...
gi 745753906   112 GVVMALTALCYLLAGIRG 129
Cdd:smart01077  93 AIFFAITGVCYGLAALGK 110
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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