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Conserved domains on  [gi|156102446|ref|XP_001616916|]
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hypothetical protein, conserved [Plasmodium vivax]

Protein Classification

NYD-SP28_assoc domain-containing protein( domain architecture ID 10632196)

NYD-SP28_assoc domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NYD-SP28_assoc pfam14775
Sperm tail C-terminal domain; NYD-SP28 is expressed in a development-dependent manner, ...
 578-640 8.11e-11

Sperm tail C-terminal domain; NYD-SP28 is expressed in a development-dependent manner, localized in spermatogenic cell cytoplams and human spermatozoa tail. It is post-translationally modified during sperm capacitation and ultimately contributes to the success of fertilization. This short region is found at the very C-terminus of family members of family NYD-SP28, pfam14772.


:

Pssm-ID: 464309  Cd Length: 60  Bit Score: 57.60  E-value: 8.11e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 156102446  578 EYWDNLARITPHDTIELWKTFLIFIEKYYHLLKERATIIQNIfseEKLVKENMSKINRMKEAL 640
Cdd:pfam14775   1 EYWERLANVIPEEKLRLWDALEKALEKYHEVLTERSKLIEET---ESLRQQNTELRNLLKQYL 60
 
Name Accession Description Interval E-value
NYD-SP28_assoc pfam14775
Sperm tail C-terminal domain; NYD-SP28 is expressed in a development-dependent manner, ...
 578-640 8.11e-11

Sperm tail C-terminal domain; NYD-SP28 is expressed in a development-dependent manner, localized in spermatogenic cell cytoplams and human spermatozoa tail. It is post-translationally modified during sperm capacitation and ultimately contributes to the success of fertilization. This short region is found at the very C-terminus of family members of family NYD-SP28, pfam14772.


Pssm-ID: 464309  Cd Length: 60  Bit Score: 57.60  E-value: 8.11e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 156102446  578 EYWDNLARITPHDTIELWKTFLIFIEKYYHLLKERATIIQNIfseEKLVKENMSKINRMKEAL 640
Cdd:pfam14775   1 EYWERLANVIPEEKLRLWDALEKALEKYHEVLTERSKLIEET---ESLRQQNTELRNLLKQYL 60
 
Name Accession Description Interval E-value
NYD-SP28_assoc pfam14775
Sperm tail C-terminal domain; NYD-SP28 is expressed in a development-dependent manner, ...
 578-640 8.11e-11

Sperm tail C-terminal domain; NYD-SP28 is expressed in a development-dependent manner, localized in spermatogenic cell cytoplams and human spermatozoa tail. It is post-translationally modified during sperm capacitation and ultimately contributes to the success of fertilization. This short region is found at the very C-terminus of family members of family NYD-SP28, pfam14772.


Pssm-ID: 464309  Cd Length: 60  Bit Score: 57.60  E-value: 8.11e-11
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 156102446  578 EYWDNLARITPHDTIELWKTFLIFIEKYYHLLKERATIIQNIfseEKLVKENMSKINRMKEAL 640
Cdd:pfam14775   1 EYWERLANVIPEEKLRLWDALEKALEKYHEVLTERSKLIEET---ESLRQQNTELRNLLKQYL 60
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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