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Conserved domains on  [gi|116192055|ref|XP_001221840|]
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uncharacterized protein CHGG_05745 [Chaetomium globosum CBS 148.51]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Tmemb_170 super family cl10884
Putative transmembrane protein 170; Tmem170 is a family of putative transmembrane proteins ...
 35-103 1.12e-09

Putative transmembrane protein 170; Tmem170 is a family of putative transmembrane proteins conserved from fungi to nematodes to humans. The protein is only of approximately 130 amino acids in length. The function is unknown.


The actual alignment was detected with superfamily member pfam10190:

Pssm-ID: 462988  Cd Length: 106  Bit Score: 51.46  E-value: 1.12e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 116192055   35 LYELDEMWKFTLFWTIILYGLFHLGAVGVAVLMQggkrmSSWKYLWLVPLIYAFIAGAEALIAGTLVGL 103
Cdd:pfam10190   2 LYDFGEMWYAIFLWALFSSIFVHLVAALIAFFTL-----RKHKFGRFIPILILLMGILIPLTGGAITSA 65
 
Name Accession Description Interval E-value
Tmemb_170 pfam10190
Putative transmembrane protein 170; Tmem170 is a family of putative transmembrane proteins ...
 35-103 1.12e-09

Putative transmembrane protein 170; Tmem170 is a family of putative transmembrane proteins conserved from fungi to nematodes to humans. The protein is only of approximately 130 amino acids in length. The function is unknown.


Pssm-ID: 462988  Cd Length: 106  Bit Score: 51.46  E-value: 1.12e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 116192055   35 LYELDEMWKFTLFWTIILYGLFHLGAVGVAVLMQggkrmSSWKYLWLVPLIYAFIAGAEALIAGTLVGL 103
Cdd:pfam10190   2 LYDFGEMWYAIFLWALFSSIFVHLVAALIAFFTL-----RKHKFGRFIPILILLMGILIPLTGGAITSA 65
 
Name Accession Description Interval E-value
Tmemb_170 pfam10190
Putative transmembrane protein 170; Tmem170 is a family of putative transmembrane proteins ...
 35-103 1.12e-09

Putative transmembrane protein 170; Tmem170 is a family of putative transmembrane proteins conserved from fungi to nematodes to humans. The protein is only of approximately 130 amino acids in length. The function is unknown.


Pssm-ID: 462988  Cd Length: 106  Bit Score: 51.46  E-value: 1.12e-09
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 116192055   35 LYELDEMWKFTLFWTIILYGLFHLGAVGVAVLMQggkrmSSWKYLWLVPLIYAFIAGAEALIAGTLVGL 103
Cdd:pfam10190   2 LYDFGEMWYAIFLWALFSSIFVHLVAALIAFFTL-----RKHKFGRFIPILILLMGILIPLTGGAITSA 65
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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