|
Name |
Accession |
Description |
Interval |
E-value |
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-741 |
0e+00 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 1479.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 1 MEQTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIQQINSSSVYQYVWSWIINND 80
Cdd:CHL00025 1 MEHTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSIQQINGSSIYQYLWSWTINND 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 81 FSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
Cdd:CHL00025 81 FSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 161 LIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVDFLFVTLCAVLLFAGAIAK 240
Cdd:CHL00025 161 LIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGSFEFRDLFEIFNNLIYNNEVNLLFATLCAFLLFLGPVAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLA 320
Cdd:CHL00025 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 321 YSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETLVGYCPKKSQNMVLMGGLTKHVPITKNSFFL 400
Cdd:CHL00025 321 YSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTFLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMCRIYLLTFEGHLNVHFQNYSGKRNTPLYSISLWG 480
Cdd:CHL00025 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMFRIYLLTFEGHLRVHFQNYSGKKNSSFYSISLWG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 481 KEGSKISNKNFRLVTllkMNKNGRPSFFSNRVYKIDENVRNMTPPFLSIpnFGNIKTSLYPYESDNTMLFPILILIIFTL 560
Cdd:CHL00025 481 KEESKKINKLLLLLT---MNNNERVSFFSKKTYKIDGNVRNMIRSFITI--FGNKKTFSYPHESDNTMLFPLLVLVLFTL 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 561 FVGFLGIPLNQ---DVDILTKWLTPSINLLHKNSNNSIDWYEFCKDAFFSVSIASFGIFIAFFLYKPVYSSFQNLDLINS 637
Cdd:CHL00025 556 FVGFIGIPFNQegiDLDILSKWLTPSINLLHQNSNNSVDWYEFLTNAIFSVSIAFFGIFIASFLYGPVYSSLQNLDLINS 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 638 FFKMGPRRNFYDKIKNAIYDWSYNRGYIDAFYGTFLIVGTRKLAEFTHFFDRRIIDGIPNGVGLISFFVAEVIKSVGGGR 717
Cdd:CHL00025 636 FVKGGPKRIFLDKIINVIYNWSYNRGYIDAFYTISFIKGIRGLAELTHFFDRRVIDGITNGVGITSFFVGEGIKYVGGGR 715
|
730 740
....*....|....*....|....
gi 2786557249 718 ISSYLFFYFSYVSIFLVIYYFLNL 741
Cdd:CHL00025 716 ISSYLFLYLFYVSIFLLILYFFFS 739
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-736 |
0e+00 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 709.48 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 1 MEQTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIQQINSSSVYQYVWSWIINND 80
Cdd:PRK07376 1 MESAYQYAWLIPVLPLLGAVLVGLGLISFNQTTNRLRQPVAVLLISLVGAAAVLSYALLWSQIQGHEPYERLFEWASAGD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 81 FSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
Cdd:PRK07376 81 FHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 161 LIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVDFLFVTLCAVLLFAGAIAK 240
Cdd:PRK07376 161 LVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGIADRLSELVSSGAVSGWLALLLCILVFLGPMAK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLA 320
Cdd:PRK07376 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 321 YSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETLVGYCPKKSQNMVLMGGLTKHVPITKNSFFL 400
Cdd:PRK07376 321 YSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVVGHDPVLAQDMRLMGGLRKYMPITAITFLI 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMCRIYLLTFEGhlnvhfqnysgkrntplysislwg 480
Cdd:PRK07376 401 GCLAISGIPPFAGFWSKDEILGAAFEANPALWFVGFLTAGMTAFYMFRMYFLTFEG------------------------ 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 481 kegsKISNKNFRLVTLLKMNKNGRPSFFSNRVYKIDENVRNMTppflsipnfgniktslyPYESDNTMLFPILILIIFTL 560
Cdd:PRK07376 457 ----EFRGNDKELQKELLAAADAPGHHEGHHEEHGEHHHHSGS-----------------PHESPWTMTLPLVVLAVPSV 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 561 FVGFLGIPLNQDVDILTKWLTPSINLLHknsnnSIDWYEFCKDAFFSVSIASFGIFIAFFLYkpvYSSFQNLDLINSFFK 640
Cdd:PRK07376 516 LIGLLGTPWNNRFEAFLHAPGEALEAAA-----HFEWGEFLILAGASVGIALIGITLASLMY---LLKKIDPAAIAERFP 587
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 641 mgprrnfydkiknAIYDWSYNRGYIDAFYGTFLIVGTRKLAEFTHFFDRRIIDGIPNGVGLISFFVAEVIKSVGGGRISS 720
Cdd:PRK07376 588 -------------PLYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEVDYKVVDGVVNLTGLVTLGSGEGLKYFENGRAQF 654
|
730
....*....|....*.
gi 2786557249 721 YLFFYFSYVSIFLVIY 736
Cdd:PRK07376 655 YALIVFGAVLGLVIVF 670
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
5-735 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 570.17 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 5 YQYAWIIPFLPLpvpmligLGLLLFPTATKSLRRMWAFqsvLLLSIVMIFSMNLSIQ---QINSSSVYQYVWSWIINNDF 81
Cdd:COG1009 1 LQLLWLIPLLPL-------LGALLAGLLGRRLGRRAAG---WLAALAPLAAFVLSLLlfpAVLGGEVVVELYTWIPVGSL 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 82 SLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLL 161
Cdd:COG1009 71 GLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 162 IGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLIsnnevDFLFVTLCAVLLFAGAIAKS 241
Cdd:COG1009 151 IGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTIL-----SSPLLTLILLLLLLGAFGKS 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 242 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAY 321
Cdd:COG1009 226 AQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAY 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 322 STMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGLTKHVPITKNSFFLG 401
Cdd:COG1009 306 STVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGT---------RDIRKMGGLRKKMPITAITFLIG 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 402 TLSLCGIPPLACFWSKDEILNDSW---LYSPIFAIIAWSTAGLTAFYMCRIYLLTFeghlnvhfqnysgkrntplysisl 478
Cdd:COG1009 377 ALSLAGIPPFAGFFSKEAILEAALeagGLGPLLLAVALLGAFLTAFYSFRLFFLVF------------------------ 432
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 479 WGKEGSKISNKnfrlvtllkmnkngrpsffsnrvykidenvrnmtppflsipnfgniktslyPYESDNTMLFPILILIIF 558
Cdd:COG1009 433 FGKPRPKTPKH---------------------------------------------------PHESPWLMTLPLVVLAVL 461
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 559 TLFVGFLGIPLNQDVDILTKWLTPSINLLHKNSNNSIdwyefckdaffSVSIASFGIFIAFFLYkpvyssfqnldLINSF 638
Cdd:COG1009 462 SLVLGLLLPGLLEGLLAPAAVLGGELHLAHGLLLNAL-----------PLLLSLLGIALGYLLY-----------LKRPL 519
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 639 FKMGPRRNFydkiknaIYDWSYNRGYIDAFYGTFLIVGTRKLAEFThFFDRRIIDGIPNGVGLISFFVAEVIKSVGGGRI 718
Cdd:COG1009 520 PALAERLKP-------LYRLLANKWYFDELYDALFVKPVRALARFL-WFDRYVIDGIVNGLARLTLFSGRLLRRLQTGYL 591
|
730
....*....|....*..
gi 2786557249 719 SSYLFFYFSYVSIFLVI 735
Cdd:COG1009 592 QFYALTILLGVVVLLLL 608
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
7-735 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 538.59 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 7 YAWIIPFLPLpvpmlIGLGLLLFptatkSLRRMWAFQSVLLLSIVMIFSMNLS------IQQINSSSVYQYVWSWIINND 80
Cdd:PRK06590 4 LLWLIVLLPL-----IGALILGL-----FGRRIGEKWAHLVGTGLVGLSALLSlvvffdFLLGGGRAFSQTLWTWISVGD 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 81 FSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
Cdd:PRK06590 74 FDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYL 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 161 LIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDlfqIFNNLISNNEVDFLFVTLCAVLLFAGAIAK 240
Cdd:PRK06590 154 LIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDE---VFAAAPQFFGLGWSALTLICLLLFIGAMGK 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLA 320
Cdd:PRK06590 231 SAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLA 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 321 YSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMEtlvgycpkKSQNMVLMGGLTKHVPITKNSFFL 400
Cdd:PRK06590 311 YSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMH--------HEQDIRKMGGLRKKMPVTYATFLI 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFA-IIAWSTAGLTAFYMCRIYLLTFEG---HLNVHfqnysgkrntplysi 476
Cdd:PRK06590 383 GTLALIGIPPFAGFFSKDEILEAAFANGHINLfVAGLVGAFLTAFYSFRLIFLVFHGkekEKIHH--------------- 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 477 slwgkegskisnknfrlvtllkmnkngrpsffsnrvykidenvrnmtppflsipnfgniktslyPYESDNTMLFPILILI 556
Cdd:PRK06590 448 ----------------------------------------------------------------PHESPAVMTLPLIVLA 463
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 557 IFTLFVGFLGIPLNQDvdiltkWLTPSINLLHKNSNNSIDWYefCKDAFFSVSIAsfGIFIAFFLYKpvyssfQNLDLIN 636
Cdd:PRK06590 464 VLSVFAGALIVPPFLG------VLPLTTELAHGEAEHHLPVW--VALLPLVVALA--GIALAWLLYL------KKPTLPT 527
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 637 SFFKMGPrrnfydkiknAIYDWSYNRGYIDAFYGTFLIVGTRKLAEFT-HFFDRRIIDGIPNGVGLISFFVAEVIKSVGG 715
Cdd:PRK06590 528 SIAAPGR----------FLYTLLRNKYYFDELYEKVFVKPGLALARLLwKDGDDGIIDGLVPNSARLVGGGSRVLRRLQT 597
|
730 740
....*....|....*....|
gi 2786557249 716 GRISSYLFFYFSYVSIFLVI 735
Cdd:PRK06590 598 GYLRHYAASMLIGAVVLLAL 617
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
46-726 |
3.92e-156 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 466.37 E-value: 3.92e-156
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 46 LLLSIVMIFSMNLSIQQInssSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFF 125
Cdd:TIGR01974 41 AALSAFVFVDFFLNGEGE---AFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFF 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 126 AYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEF 205
Cdd:TIGR01974 118 AYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNF 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 206 RDLFQIFNNlisnneVDFLFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFL 285
Cdd:TIGR01974 198 QEVFALAPG------AFFSALTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFE 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 286 VIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIH 365
Cdd:TIGR01974 272 LSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIH 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 366 SMEtlvgycpkKSQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEILNDSW--LYSPIFAIIAWSTAGLTA 443
Cdd:TIGR01974 352 AMH--------HEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFasGTHSFLFVAGLIGAFLTA 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 444 FYMCRIYLLTFEGHlnvhfqnysgkrntplysislwgkegSKISNKNfrlvtllkmnkngrpsffsnrvykidenvrnmt 523
Cdd:TIGR01974 424 FYSFRLIFMVFHGK--------------------------ERHEADA--------------------------------- 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 524 ppflsipnfgniktslYPYESDNTMLFPILILIIFTLFVGFLGIPLNQDV-DILTKWLTPSINLLHKNSnnsidwyeFCK 602
Cdd:TIGR01974 445 ----------------HPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFLkGVLPTSAEPALEHHHVPA--------LEI 500
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 603 DAFFSVSIAsfGIFIAFFLYKpvyssfQNLDLINSFFKMGprrnfydkikNAIYDWSYNRGYIDAFYGTFLIVGTRKLAE 682
Cdd:TIGR01974 501 WSPTAVAIL--GILLAYLLYL------GNPTLPAKIAQRH----------SGLYRLLLNKWYFDELYDKVFVKPYLFLGK 562
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 2786557249 683 FTHFF-DRRIIDGIPNGVGLISFFVAEVIKSVGGGRISSYLFFYF 726
Cdd:TIGR01974 563 LLWKDpDDKIIDGFGPGIARLVGAISKRLRKSQTGYLRWYAASMV 607
|
|
| Proton_antipo_C |
pfam01010 |
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a ... |
448-688 |
1.48e-145 |
|
NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus; This sub-family represents a carboxyl terminal extension of pfam00361. It includes subunit 5 from chloroplasts, and bacterial subunit L. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane. This family is largely a few TM regions of the F subunit of NADH-Ubiquinone oxidoreductase from plants. The TMs form part of the anti-porter subunit.
Pssm-ID: 366417 [Multi-domain] Cd Length: 244 Bit Score: 425.49 E-value: 1.48e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 448 RIYLLTFEGHLNVHFQNYSGKRNTPLYSISLWGKEGSKISNKNFRLVTLLKMNKNGRPSFFSNRVYKIDENVRNMTPPFL 527
Cdd:pfam01010 1 RIYLLTFEGHLNVHFQNYSGKKNSSFYSISLWGKEGSKLINKNFRTLLLLTMNNNEKVSFFSKKTYRIDGNVRNMTRPFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 528 SIPNFGNIKTSLYPYESDNTMLFPILILIIFTLFVGFLGIPLNQ---DVDILTKWLTPSINLLHKNSNNSIDWYEFCKDA 604
Cdd:pfam01010 81 TITHFDNKKTFSYPHESDNTMLFPLLVLVLFTLFVGFIGIPFNQegiDLDILSKWLTPSINLLHKNSNNSVDWYEFVTNA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 605 FFSVSIASFGIFIAFFLYKPVYSSFQNLDLINSFFKMGPRRNFYDKIKNAIYDWSYNRGYIDAFYGTFLIVGTRKLAEFT 684
Cdd:pfam01010 161 IFSVSIAYFGIFIASFLYKPVYSSFQNLDLINSFVKKGPKRIFLDKIINVIYNWSYNRGYIDVFYTTSFTRGIRGLAELT 240
|
....
gi 2786557249 685 HFFD 688
Cdd:pfam01010 241 HFFD 244
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
63-459 |
3.83e-110 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 347.38 E-value: 3.83e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 63 INSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSS 142
Cdd:MTH00210 52 LNGSATYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSD 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 143 NLIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVd 222
Cdd:MTH00210 132 NYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLLVTNINKESL- 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 223 flfvTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITV 302
Cdd:MTH00210 211 ----TIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 303 FLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMetlvgycpKKSQNMV 382
Cdd:MTH00210 287 FFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAV--------SDEQDMR 358
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2786557249 383 LMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEILNDSW-LYSPIFAI-IAWSTAGLTAFYMCRIYLLTFEGHLN 459
Cdd:MTH00210 359 KMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYdKYYIAFAYwLGSFSALLTAFYSIRLIYLTFITNTN 437
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
46-454 |
6.92e-109 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 343.98 E-value: 6.92e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 46 LLLSIVMIFSMNLSI-----QQINSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMSHDHG 120
Cdd:MTH00020 30 ILTSSCLIISLSWSFlifyeILFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPH 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 121 YLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVT 200
Cdd:MTH00020 110 IPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRF 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 201 GSFEFRDLFQIFNNLISNNevdflfVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL 280
Cdd:MTH00020 190 GSLDFSSVFNMVVSAPSSD------ITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRS 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 281 MPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGS 360
Cdd:MTH00020 264 SPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSA 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 361 GSVIHSMetlvgycpKKSQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEILNDSWL-YSPIFAI-IAWST 438
Cdd:MTH00020 344 GSVIHAL--------SDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGqYYLIFAYwLGCFS 415
|
410
....*....|....*.
gi 2786557249 439 AGLTAFYMCRIYLLTF 454
Cdd:MTH00020 416 ALLTAFYSIRLIYLTF 431
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
20-460 |
9.10e-89 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 290.70 E-value: 9.10e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 20 MLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIFsmnLSIQQINSSSVYQyvWSWIINNDFSLEFGYLIDPLTSIMSIL 99
Cdd:MTH00211 13 LILLLLPLLLPLNNSKLHIKKAVKLSFFISLIPLL---IFLDQGLETILTN--WSWINLGLFSLNLSFKFDFYSIFFTSV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 100 ITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAF 179
Cdd:MTH00211 88 ALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 180 VTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLisnnevdflfvTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTP 259
Cdd:MTH00211 168 IYNRIGDIGLLLSMVWLLLNLNSWEISQLFILNLDL-----------TLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 260 ISALIHAATMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSY 339
Cdd:MTH00211 237 VSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQP 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 340 RSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkkSQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKDE 419
Cdd:MTH00211 317 QLAFLHICTHAFFKAMLFMCSGSIIHGLNN--------EQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDL 388
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 2786557249 420 IL---NDSWLYS--PIFAIIAwstAGLTAFYMCRIYLLTFEGHLNV 460
Cdd:MTH00211 389 ILesmNGSYLNAwaLLLTLLA---TSLTAAYSFRLIFLSLGGYPRF 431
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
10-421 |
4.61e-86 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 285.70 E-value: 4.61e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 10 IIPFLPLPVPMLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIFSMnlsiqQINSSSVYQYVWSWIINNDFSLEFGYLI 89
Cdd:MTH00032 4 LVLLLPFINAFLLGFFGRLIGTIGSGILSTICMGSSTLIALFLAYEV-----LINDAVVHIELYKWIESEIFITHIGLLY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 90 DPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRP 169
Cdd:MTH00032 79 DTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRI 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 170 VAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEF---------RDLFQIFNNLISNNEVDFLFVTLCAVLLFAGAIAK 240
Cdd:MTH00032 159 QANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFltfnggsvgSGIMDRGYYGGGAYESPLAPFAIIGILLLIGCIGK 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLA 320
Cdd:MTH00032 239 SAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 321 YSTMSQLGYMMLALGM-GSYRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkKSQNMVLMGGLTKHVPITKNSFF 399
Cdd:MTH00032 319 YSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTV-------DEQDMRKMGGLIHSIPFTYTMML 391
|
410 420
....*....|....*....|..
gi 2786557249 400 LGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00032 392 IGSFSIMGLPYLTGFYSKDLIL 413
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
141-440 |
2.08e-83 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 266.49 E-value: 2.08e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 141 SSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNE 220
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 221 VDFLFvtlcaVLLFAGAIAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLMPLFL-VIPPIMNFISLIG 298
Cdd:pfam00361 81 LLLLF-----LLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLpSSPFIQQILLILA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 299 IITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSVIHSMetlvgycp 375
Cdd:pfam00361 155 IISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRR-------- 226
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2786557249 376 KKSQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAG 440
Cdd:pfam00361 227 VHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
6-733 |
2.72e-83 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 276.41 E-value: 2.72e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 6 QYAWIIPFLPLpvpmlIGlGLLLFPTATKSLRRMW----AFQSVLLLSIVMIFSMnLSIQQINSSSVYQYVWSWIINNDF 81
Cdd:PRK07390 7 QTSWLIPLYGL-----IG-ALLSLPWSPGIIRRTGprpaAYLNLLMTLLAFVHSL-LALRAIWNQPPQQLSFPWLQVADL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 82 SLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLL 161
Cdd:PRK07390 80 DLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEILTLSTYLL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 162 IGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQifnnLISNNEVDFLFVTLCAVLLFAGAIAKS 241
Cdd:PRK07390 160 VGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAA----WAATANLDPLTATLLGLALIAGPTGKC 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 242 AQFPLHVWLPDAMEGPTPISALIHAAtMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAY 321
Cdd:PRK07390 236 AQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSY 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 322 STMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGLTKHVPITKNSFFLG 401
Cdd:PRK07390 315 STSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTTIT---------QDLTELGGLWSRMPATTLAFLVG 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 402 TLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMCRIylltfeghlnvhfqnysgkrntplysislwgk 481
Cdd:PRK07390 386 SAGLVALLPLGGFWALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRV-------------------------------- 433
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 482 egskisnknFRLVTLlkmnknGRPSFFSNRvykidenvrnmTPpflsipnfgniktslypyESDNTMLFPILILIIFTLF 561
Cdd:PRK07390 434 ---------FRLVFL------GKPQQKTRR-----------SP------------------EVLWPMALPMVILAGFTLH 469
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 562 VgflgiPLnqdvdILTKWltpsiNLLhknsnnsIDWYEFCKDAFFSVSIAS-FGIFIAFFLY-KPVYSSFQNLdlinsff 639
Cdd:PRK07390 470 L-----PL-----LLQQW-----GLL-------PSWEALNLWAAPLLVASGlLGVLLGAWIYlNKAWSRPIQL------- 520
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 640 kmgPRRNFYDKIKnaiYDWsynrgYIDAFYGTFLIVGTRKLAEFTHFFDRRIIDGIPNGVGLISFFVAEVIKSVGGGRIS 719
Cdd:PRK07390 521 ---PLRFLQDLLA---YDF-----YTDRLYRLTIVFVVALISRLTAWFDRYVVDGLVNLVGLATLFSGQGLKYSVSGQSQ 589
|
730
....*....|....
gi 2786557249 720 SYLFFYFSYVSIFL 733
Cdd:PRK07390 590 FYVLTILLGVALLG 603
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
10-457 |
1.24e-77 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 261.25 E-value: 1.24e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 10 IIPFLPLPVPMLIGLGLLLFPTATKSLRR--MWAFqsvlLLSIV-MIFSMNLSIQQINSSsvyqyvWSWIINNDFSLEFG 86
Cdd:MTH00004 10 LLTLLILLTPILLPLLSKNLKNSPTTIKTtvKLAF----LISLIpLTLFLNSGTESITTN------WPWIFTTTFNIPIS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 87 YLIDPLtsimSILITTVGILV----LIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLI 162
Cdd:MTH00004 80 FKLDQY----SLMFLPIALFVtwsiLEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 163 GFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFqifnnliSNNEVDflfvTLCAVLLFAGAIAKSA 242
Cdd:MTH00004 156 GWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLF-------SPTQTP----TLPLLGLILAATGKSA 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 243 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYS 322
Cdd:MTH00004 225 QFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFS 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 323 TMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMetlvgycpKKSQNMVLMGGLTKHVPITKNSFFLGT 402
Cdd:MTH00004 305 TSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLQKTLPITSSCLTIGN 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 2786557249 403 LSLCGIPPLACFWSKD---EILNDSWLYSPIFAIIAWSTAgLTAFYMCRIYLLTFEGH 457
Cdd:MTH00004 377 LALMGTPFLSGFYSKDtiiETLNTSYLNAWALLLTLLATS-FTAAYSLRMILLVQTGF 433
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
44-454 |
2.23e-77 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 261.06 E-value: 2.23e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 44 SVLLLSIVMIFSMNLSIQQINSSsvyqyVWSWIINNDFSLEFGYLIDpltsIMSILITTVGILV----LIYSDNYMSHDH 119
Cdd:MTH00208 65 LAFLSLINLLIWILLGCPNINIS-----LSNWLSNTLFNFSLSFIFD----FYFILFFSVALFVtwsiIEFSHYYMSNDP 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 120 GYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWV 199
Cdd:MTH00208 136 NKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLIN 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 200 TGSFEFrdlfqifNNLISNNEVDFLFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR 279
Cdd:MTH00208 216 FNSWNL-------NEILSLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIR 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 280 LMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLG 359
Cdd:MTH00208 289 TSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLC 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 360 SGSVIHSMetlvgycpKKSQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEIL-----NDSWLYSPIFAII 434
Cdd:MTH00208 369 SGSIIHSL--------NNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILeaglaSISNLLSIILALI 440
|
410 420
....*....|....*....|
gi 2786557249 435 AwstAGLTAFYMCRIYLLTF 454
Cdd:MTH00208 441 A---TLLTAVYSFRIIFFCF 457
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
11-450 |
2.32e-77 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 255.07 E-value: 2.32e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 11 IPFLPLPVPMLIGLGLLLFPTATKsLRRMWAFQSVLLLSIVMIFSMnlsiQQINSSSVYQYVWSwiinnDFSLEFG--YL 88
Cdd:COG0651 4 LLILPVLLPLLAAALLLLLGRRRR-LQRALSLLASLALLALALALL----LQVLAGGPLVYALG-----GWPAPFGivLV 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 89 IDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 168
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTK 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 169 PvAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFnnlisnNEVDFLFVTLCAVLLFAGAIAKSAQFPLHV 248
Cdd:COG0651 154 E-ALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARL------AELDPGLLLAAFALLLVGFGIKAALFPLHF 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 249 WLPDAM-EGPTPISALIHAAtMVAAGIFLVARLMPLFL---VIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTM 324
Cdd:COG0651 227 WLPDAYpAAPSPVSALLSGL-LTKVGVYAILRVLTLLFgadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSV 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 325 SQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVIHSmetlvgycpKKSQNMVLMGGLTKHVPITKNSFFLG 401
Cdd:COG0651 306 SQIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERA---------TGTRDLDKLGGLGKRMPLTAAAFLIG 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 2786557249 402 TLSLCGIPPLACFWSKDEILN---DSWLYSPIFAIIAwsTAGLTAFYMCRIY 450
Cdd:COG0651 377 ALALAGLPPLSGFVSKWLLLQaalEAGAWLLAAVLLL--SSLLTLAYFVRIF 426
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
60-441 |
1.61e-75 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 259.08 E-value: 1.61e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 60 IQQINSSSVYQYVWSWIinNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLV 139
Cdd:PRK12647 35 IPEIAAGETVRGGYAWV--PSLGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 140 TSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQiFNNLISNN 219
Cdd:PRK12647 113 LSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLA-SGDVIREH 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 220 EvdflFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPIMNFISLIGI 299
Cdd:PRK12647 192 P----LYLAILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGG 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 300 ITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpk 376
Cdd:PRK12647 268 LTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHETGT------- 340
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 377 ksQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEILN-----DSWlySPIFAIIAWSTAGL 441
Cdd:PRK12647 341 --RDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEalleaPLW--SLILTVAAVLGNAL 406
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
20-449 |
7.49e-75 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 253.68 E-value: 7.49e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 20 MLIGLGLLLFPTaTKSLRRMWAFQ---SV---LLLSIV--MIFsMNLSIQQINSSsvyqyvWSWIINNDFSLEFGYLIDp 91
Cdd:MTH00066 11 MILSLLLLILPL-LLPKSNNFHTNvktSVktaFFISLIplMIF-INQGLESITTS------FHWMNIFNFNINSSFKFD- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 92 ltsIMSILITTVGILV----LIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFT 167
Cdd:MTH00066 82 ---QYSIIFLPIALFVtwsiLEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 168 RPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNlisnnevdflfVTLCAVLLFAGAIAKSAQFPLH 247
Cdd:MTH00066 159 RADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLNDN-----------STLPLLGLILAAAGKSAQFGLH 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 248 VWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQL 327
Cdd:MTH00066 228 PWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQL 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 328 GYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMetlvgycpKKSQNMVLMGGLTKHVPITKNSFFLGTLSLCG 407
Cdd:MTH00066 308 GLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLQKALPITTSCLTIGSLALTG 379
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 2786557249 408 IPPLACFWSKDEI---LNDSWL--YSPIFAIIAWStagLTAFYMCRI 449
Cdd:MTH00066 380 TPFLAGFFSKDAIieaMNTSNLnsWALILTLIATS---FTAVYSFRI 423
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
20-449 |
5.71e-70 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 240.50 E-value: 5.71e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 20 MLIGLGLLLFPTAT----KSLRRMWAFQSV-------LLLSIV--MIFsMNLSIQQINSSsvyqyvWSWIINNDF----S 82
Cdd:MTH00137 11 LILIFALLIYPLLTtlspNPQKPNWALTHVktavktaFFVSLLplFLF-LNQGAETIITN------WNWMNTLTFdiniS 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 83 LEFGYLidpltsimSILITTVGILV----LIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCS 158
Cdd:MTH00137 84 FKFDHY--------SIIFTPIALYVtwsiLEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMS 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 159 YLLIGFWFTRPVAAKACQKAFVTNRVGDFGLllgILGFYWVTGSFEFRDLFQIFnnlISNNEVDflfVTLCAVLLFAGAI 238
Cdd:MTH00137 156 FLLIGWWYGRADANTAALQAVIYNRVGDIGL---ILAMAWMATNLNSWEIQQIF---ALSKDFD---LTLPLLGLILAAT 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 239 AKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRG 318
Cdd:MTH00137 227 GKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKI 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 319 LAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMetlvgycpKKSQNMVLMGGLTKHVPITKNSF 398
Cdd:MTH00137 307 VAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSL--------NDEQDIRKMGGLHHLTPFTSSCL 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2786557249 399 FLGTLSLCGIPPLACFWSKDEI---LNDSWL--YSPIFAIIAWStagLTAFYMCRI 449
Cdd:MTH00137 379 TIGSLALTGTPFLAGFFSKDAIieaLNTSHLnaWALTLTLIATS---FTAVYSLRV 431
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
22-434 |
1.55e-69 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 236.02 E-value: 1.55e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 22 IGLGLLLFPTATKslRRMWAFQSVLLLSIVMIFSMNLSIQQINSSSVYQYVWSWiinNDFSLeFGYLIDPLTSIMSILIT 101
Cdd:PRK06525 12 FIGALVVFFLPGR--RAAELGVLFAALTTLCMLSLAYAFYQAGKVAVTLTLVNL---GDVAL-FGLVIDPVSVLIGFVVV 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 102 TVGILVLIYSDNYMS-------HDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTrPVAAKA 174
Cdd:PRK06525 86 LLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQS-PKALRS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 175 CQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLfqifnNLISNNEVDFLFvtlcAVLLFAgAIAKSAQFPLHVWLPDAM 254
Cdd:PRK06525 165 ALKALLITHIGSLGLYLAAATLFLQTGTFALSAL-----SGLHGSLKYLVF----LGILFA-AWGKSAQLPFYSWLPDAM 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 255 EGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPIMNFI-SLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLA 333
Cdd:PRK06525 235 EAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVgAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 334 LGMGSYRS------ALFHLITHAYSKALLFLGSGSVIHSMETLvgycpkksqNMVLMGGLTKHVPITKNSFFLGTLSLCG 407
Cdd:PRK06525 315 LSLAILGSrlalegSIAYIFNHAFAKSLFFLVAGALSYSCGTR---------LLPRLRGVLKKLPLVGVGFCVAALAITG 385
|
410 420
....*....|....*....|....*..
gi 2786557249 408 IPPLACFWSKDEILNDSWLYSPIFAII 434
Cdd:PRK06525 386 VPPFNGFFSKFPIFAAGFELSVEYWIL 412
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
27-456 |
2.21e-69 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 243.21 E-value: 2.21e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 27 LLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIQQINSSSVYQYVWSWIinNDFSLEFGYLIDPLTSIMSILITTVGIL 106
Cdd:TIGR00940 13 SLIPILYPSDQRIHIGWFVLAIPLVCFLYTLGLYPYTASGGVLHYTIDWV--PELGLNFTLYMDGLALLFSLLITGIGVL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 107 VLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGD 186
Cdd:TIGR00940 91 VVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGG 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 187 FGLLLGILGFYWVTGSFEFRDLFQIFNNLIsnNEVDFLFVTlcaVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHA 266
Cdd:TIGR00940 171 LAMLGGLILLGKITGSFSIDAVIASADAIR--NSPLFGTAM---VLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHS 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 267 ATMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS-------- 338
Cdd:TIGR00940 246 ATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSpsyhyqgd 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 339 --------YRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPP 410
Cdd:TIGR00940 326 dskiyalaAVAAVFHLINHATFKGSLFMAAGIIDHETGT---------RDIRKLGGLFHIMPITFTLAMIASAAMAGVPP 396
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2786557249 411 LACFWSKDEILN-------------DSWLYspIFAIIAWSTAGLTAFYMCRIYLLTFEG 456
Cdd:TIGR00940 397 FNGFLSKEMFFAeaitahlvnpfdtVTLGY--LFPYVATVASVFTFVYSLRFIHGVFFG 453
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
10-457 |
8.31e-69 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 241.37 E-value: 8.31e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 10 IIPFLPLPVPMLIglglllfPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIQQINSSSVYQYVWSWIINndFSLEFGYLI 89
Cdd:PRK12645 6 IAILLPFIFALLI-------PFLYKYFKRIHTGWFVLPVPVVLFIYFLSLIPTTMSGNTVMKTLPWIPS--LGINFTLYV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 90 DPLTSIMSILITTVGILVLIYSDNYMSHDHGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 168
Cdd:PRK12645 77 DGLSLLFALLITGIGSLVVLYSIYYLSKKKEQLgNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYER 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 169 PVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNnLISNNEvdflFVTLCAVLLFAGAIAKSAQFPLHV 248
Cdd:PRK12645 157 EASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIANAD-EIQNSP----LFIPAMILILLGAFTKSAQFPFYI 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 249 WLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLG 328
Cdd:PRK12645 232 WLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLG 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 329 YMMLALGMGS----------------YRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGLTKHVP 392
Cdd:PRK12645 312 LIMSLLGIGAaslhyqgddskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHETGT---------RDIRKLGGLMTIMP 382
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2786557249 393 ITKNSFFLGTLSLCGIPPLACFWSKDEILN-------------DSWLYspIFAIIAWSTAGLTAFYMCRIYLLTFEGH 457
Cdd:PRK12645 383 ITFTIALIGALSMAGLPPFNGFLSKEMFFEsmlnateanlfslDTWGV--LFPVIAWVASVFTFVYSIIFIFKTFFGK 458
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
114-457 |
1.14e-67 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 233.98 E-value: 1.14e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 114 YMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGI 193
Cdd:MTH00108 107 YMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAM 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 194 LGFYWVTGSFEFRdlfQIFnnlISNNEVDFLfvTLCAVLLfaGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAG 273
Cdd:MTH00108 187 AWFLLNLNSWDLQ---QIF---MLNPNNSNL--PLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAG 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 274 IFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSK 353
Cdd:MTH00108 257 VFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFK 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 354 ALLFLGSGSVIHSMetlvgycpKKSQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKD---EILNDSwlYSPI 430
Cdd:MTH00108 337 AMLFMCSGSIIHNL--------NDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDliiEAANTS--YTNA 406
|
330 340 350
....*....|....*....|....*....|.
gi 2786557249 431 FA----IIAWStagLTAFYMCRIYLLTFEGH 457
Cdd:MTH00108 407 WAllitLIATS---LTAAYSTRIIFFALLGQ 434
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
71-448 |
2.13e-66 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 237.13 E-value: 2.13e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 71 YVWSWIinNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMSHDHGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYI 149
Cdd:PRK12644 56 EVVPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDEPRLgRFAAELVAFAGAMFGLVTSDNLLLLYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 150 FWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFqifnnlisNNEVDFLFVTLC 229
Cdd:PRK12644 134 FWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELL--------ADPPTGPAVSVA 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 230 AVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLA 309
Cdd:PRK12644 206 VVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRA 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 310 LAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHL---ITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGG 386
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHSTGT---------RDIRKLSG 356
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2786557249 387 LTKHVPITKNSFFLGTLSLCGIPPLACFWSK----DEILNDSWLYSPIFAIIAWSTAG--LTAFYMCR 448
Cdd:PRK12644 357 LGRRQPVLAVVAALAAASMAGLPPLLGFVAKeaalEAVLHDGALGPAGPVVLAGIVLGsiLTVAYSLR 424
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
10-435 |
3.65e-65 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 233.54 E-value: 3.65e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 10 IIPFLPLpvpmligLGLLLFPTATKSLRRM--WAFQSVLLLSIVMIFSMnlsIQQINSSSVYQYVWSWIinNDFSLEFGY 87
Cdd:PRK12648 5 LLVLLPF-------LGALLAALLPRNARNAeaWLAGLVALAALVLLALL---YPAVAAGEVIRAEIEWL--PALGLNLSL 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 88 LIDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFT 167
Cdd:PRK12648 73 RLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHH 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 168 RPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIfNNLISNNEvdfLFV-TLCAVLLfaGAIAKSAQFPL 246
Cdd:PRK12648 153 RADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDVVLAA-GDLIRAHP---LYPpALVLILL--GAFTKSAQFPF 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 247 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQ 326
Cdd:PRK12648 227 HFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISH 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 327 LGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVIHsmETlvgycpkKSQNMVLMGGLTKHVPITKNSFFLGTL 403
Cdd:PRK12648 307 LGLITLLLGLGSPLAavaAIFHIINHATFKASLFMAAGIIDH--ET-------GTRDMRRLSGLRRLMPITATLAMVAAA 377
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 2786557249 404 SLCGIPPLACFWSK----DEILNDSWLYS-----PIFAIIA 435
Cdd:PRK12648 378 AMAGVPLLNGFLSKemffAETLDTHLLGSldwllPVAATLA 418
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
83-418 |
2.27e-64 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 228.95 E-value: 2.27e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 83 LEFGYLIDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLI 162
Cdd:PRK12649 72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 163 GFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVDFLFVTLcaVLLFAGAIAKSA 242
Cdd:PRK12649 152 GYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITL--ILIFIGAAAKSA 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 243 QFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYS 322
Cdd:PRK12649 230 QGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYS 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 323 TMSQLGYMMLALGMGSYR-------SALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGLTKHVPITK 395
Cdd:PRK12649 310 TISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEAAT---------RDIRKLGGLRKEMPITF 380
|
330 340
....*....|....*....|...
gi 2786557249 396 NSFFLGTLSLCGIPPLACFWSKD 418
Cdd:PRK12649 381 IVASIAALAMAGIPPLNGFLSKE 403
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
42-459 |
2.51e-58 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 207.69 E-value: 2.51e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 42 FQSVLLLSIVMIFSMNLSIQQINSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMSHDHGY 121
Cdd:MTH00165 5 LISFFFLFFLSLILFFLGLYFLLNDYSLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 122 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPVAAKACQKAFVTNRVGDFGLLLGIlGFYWVTG 201
Cdd:MTH00165 85 NRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSI-AWMMNFG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 202 SFEFrdlfqIFNNLISNNEVDFLFVTLcavLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLM 281
Cdd:MTH00165 163 SWNF-----IFYLDFMKNSFEMLLIGL---LIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFN 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 282 PLFLvIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSG 361
Cdd:MTH00165 235 NLLF-SSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 362 SVIHSMetlvgycpKKSQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKD---EILNDSWLYSPIFAIIAWST 438
Cdd:MTH00165 314 SIIHNM--------SNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDlilEMVSMSNLNFFIFFLFFFST 385
|
410 420
....*....|....*....|.
gi 2786557249 439 aGLTAFYMCRIYLLTFEGHLN 459
Cdd:MTH00165 386 -GLTVSYSFRLIYYSMSGDFN 405
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
75-418 |
9.23e-58 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 210.38 E-value: 9.23e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 75 WIINNDFSLEFgyLIDPLTSIMSILITTVGILVLIYSDNYMSHDHGYL-RFFAYMSFFSTSMLGLVTSSNLIQIYIFWEL 153
Cdd:PRK12646 64 WMKTLDINLDL--RLDGLSLMFSLIISLIGIAVFFYATQYLSSRKDNLpRFYFYLTLFMFSMIGIVLSDNTILMYVFWEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 154 VGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLisNNEVDFLFVTLCAVLl 233
Cdd:PRK12646 142 TSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHI--KNHGLFIPMIFMFLL- 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 234 faGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQK 313
Cdd:PRK12646 219 --GAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQW 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 314 DIKRGLAYSTMSQLGYMMLALGMG-----------------SYRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpk 376
Cdd:PRK12646 297 DLKGILAYSTISQLGMIMAMVGIGggyaqhqqdaiasiyvfVLFAALFHLMNHAIFKCALFMGVGIIDHEAGT------- 369
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2786557249 377 ksQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKD 418
Cdd:PRK12646 370 --RDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKE 409
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
45-459 |
7.00e-55 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 197.95 E-value: 7.00e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 45 VLLLSIVMIFSMNLSIQQINSSSVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRF 124
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRF 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 125 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAkACQKAFVTNRVGDFGLLLGILGFYwvtgsfe 204
Cdd:MTH00209 86 ILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLS-AGMLTALTNRVGDALLILSIAWML------- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 205 frdLFQIFNNLISNNEVDFLFVTLCAVLLfaGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLF 284
Cdd:MTH00209 158 ---MHGNWNIFYLNFNSNLGSVISVLIVL--AAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 285 LVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVI 364
Cdd:MTH00209 233 FSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNII 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 365 HSMetlvgycpKKSQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEILnDSWLYS--PIFAIIAWSTA-GL 441
Cdd:MTH00209 313 HSH--------GHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLIL-ESMLESnmPIMTLILMFLStSL 383
|
410
....*....|....*...
gi 2786557249 442 TAFYMCRIYLLTFEGHLN 459
Cdd:MTH00209 384 TAAYSMRLSYFSLWGPNS 401
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
44-460 |
1.07e-54 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 197.37 E-value: 1.07e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 44 SVLLLSIVMIFSMNLSIQQINSSSvyqYVWSWIINNDFSLEFGY--LIDPLTSIMSILITTVGILVLIYSDNYMSHDHGY 121
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGIS---LIFEWELLSVSSCSFSFelVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 122 LRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWftrpVAAKACQKAFVT---NRVGDFGLLLGILGFYw 198
Cdd:MTH00151 85 KRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYY----QNKKSLSAGMLTaltNRIGDVLILLSIALLV- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 199 VTGSFEFRDLFqifnnlisnnevDFLFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVA 278
Cdd:MTH00151 160 LLGHWSILSMW------------DFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLI 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 279 RLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFL 358
Cdd:MTH00151 228 RFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFL 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 359 GSGSVIHSMETlvgycpkkSQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEILN---DSWLYSPIFAIIA 435
Cdd:MTH00151 308 CAGSIIHSSSG--------TQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILEsslMSPTSLLMVLLMF 379
|
410 420
....*....|....*....|....*
gi 2786557249 436 WSTaGLTAFYMCRIYLLTFEGHLNV 460
Cdd:MTH00151 380 VGV-GLTALYSARLSFCLVWGSMKS 403
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-449 |
2.38e-53 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 192.02 E-value: 2.38e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 10 IIPFLPLPVPMLIGLGLLLFPTaTKSLRRMWAFqSVLLLSIVMIFSMnlsIQQINSSSVYQYV---WSWIInndfSLEFG 86
Cdd:PRK08375 4 HLLPLLVAVPLLAAALIVLLPK-RRRLRWALAL-LVAALTFALAISL---LPQVLDGGVIAYVvggWPPGI----GIELR 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 87 ylIDPLTSIMSILITTVGILVLIYSdnYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 166
Cdd:PRK08375 75 --ADSLSALFLLVTSILAIAALLYA--IGYGEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 167 TRpVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNnlisnnEVDFLFVTLcAVLLFAGAIaKSAQFPL 246
Cdd:PRK08375 151 DR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALA------ENPTVVTAF-GFVLLALAL-KAAVFPL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 247 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARLM-----PLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAY 321
Cdd:PRK08375 222 HTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAY 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 322 STMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVihsmetlvgYCPKKSQNMVLMGGLTKHVPITKNSF 398
Cdd:PRK08375 302 STVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAI---------EVTYGTRRLSELSGLGRRMPLTAAAF 372
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2786557249 399 FLGTLSLCGIPPLACFWSKDEIL---NDSWLYSPIFAIIAWSTagLTAFYMCRI 449
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVvgaVEAGQWLVLAVLLASSL--LALLYFLRI 424
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
26-451 |
4.56e-53 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 193.06 E-value: 4.56e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 26 LLLFPTATKSLRRMWAFqsvlllsIVMIFSMNLSIQQINSSSVYQyvWSWIINNDFSLEFGYLIDPLTSIMSILITTVGI 105
Cdd:MTH00207 1 LRMFKPSSIASYLLWFM-------SILMFPLSLYLMMCNKTILIE--WEIFTISSSPINFTIILDPTGTLFSSTVLFISA 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 106 LVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIgFWFTRPVAAKACQKAFVTNRVG 185
Cdd:MTH00207 72 NVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 186 DFGLLLGIlgfYWvTGSFEFRDLFQIFNNLISNnevdflFVTLCAVLlfaGAIAKSAQFPLHVWLPDAMEGPTPISALIH 265
Cdd:MTH00207 151 DVMLLLSI---GW-TLNQGHWSITNMWQTDMNN------YIALSIMI---AAMTKSAQMPFSSWLPAAMAAPTPVSALVH 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 266 AATMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFH 345
Cdd:MTH00207 218 SSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFH 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 346 LITHAYSKALLFLGSGSVIHSMEtlvgycpkKSQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEILnDSW 425
Cdd:MTH00207 298 LITHALFKALLFVCAGSLIHSHH--------HSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLIL-ESS 368
|
410 420
....*....|....*....|....*....
gi 2786557249 426 LYSP---IFAIIAWSTAGLTAFYMCRIYL 451
Cdd:MTH00207 369 LFYPhnsLMILMIFLATALTAAYSTRFTL 397
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
18-459 |
6.84e-53 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 190.68 E-value: 6.84e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 18 VPMLIGLGLLLFPTATKSLRRMWAFQS---VLLLSIVMIFSMNlsiqqiNSSSVYQYV--WSWIinNDFSLEFGYLIDPL 92
Cdd:COG1008 12 LPLLGALLLLLLPRRNARLARWVALAVsllTLLLSLYLLAGFD------PGTGGFQFVesYPWI--PSLGISYHLGVDGI 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 93 TSIMSILITTVGILVLIYSDNYMSHDHGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW--FTRPV 170
Cdd:COG1008 84 SLPLVLLTALLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 171 AAKacqKAFVTNRVGDFGLLLGILGFYWVTGSFEFrDLFQIFNNLISNNEVDFLFVtlcavLLFAGAIAKSAQFPLHVWL 250
Cdd:COG1008 162 AAI---KFFLYTLAGSLLMLVAILALYFLAGALTF-DIAELAAAPLPLTAQLLLFL-----AFFIAFAVKVPMFPFHTWL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 251 PDA-MEGPTPISAlIHAATMVAAGIFLVARL-MPLFlvipP-----IMNFISLIGIITVFLGATLALAQKDIKRGLAYST 323
Cdd:COG1008 233 PDAhVEAPTAGSV-LLAGVLLKMGGYGLLRFaLPLF----PeasayFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSS 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 324 MSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVIHSMETLvgycpkksqNMVLMGGLTKHVPITKNSFFL 400
Cdd:COG1008 308 VSHMGFVLLGIFALNPLGlqgAVLQMVSHGLITAALFLLVGVLYDRTHTR---------DIADLGGLAKRMPVLAALFLL 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2786557249 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMCRIYLLTFEGHLN 459
Cdd:COG1008 379 AALASLGLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLK 437
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
16-454 |
1.23e-50 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 191.02 E-value: 1.23e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 16 LPVPMLIGLGLLLFPTATKSLRRM--WAFQSVLLLSIVMIFSmnlSIQQINSSSVYQYVWSWI---INNDFSLEFGYLID 90
Cdd:PRK12650 2 LAVLALAALAVVLAPPLVRVLDRKagWPLAAIFVAAAGLLLK---ELPPILDGDALTWSVTWIpdlLGNGVDVNLALRAD 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 91 PLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFwfTRPV 170
Cdd:PRK12650 79 ALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSG 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 171 AAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLfqIFNNLISNNEVdflFVTLCAVLLFAGAIAKSAQFPLHVWL 250
Cdd:PRK12650 157 GEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGI--LHSDVWAEKPG---LTTVVAVLIAVAAFTKSAQFPFHFWL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 251 PDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYM 330
Cdd:PRK12650 232 PEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWI 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 331 MLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGLTKHVPITKNSFFLGTLSLCG 407
Cdd:PRK12650 312 VATIGVGTpfaLTAAVVHTLAHALFKSSLFMLIGVVDHQAGT---------RDIRRLGSLWRRMPFTFVSVTIAALSMAA 382
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2786557249 408 IPPLACFWSKDEILnDSWLYSPIFAIIAW---STAGLTAF----YMCRIYLLTF 454
Cdd:PRK12650 383 VPPLFGFVSKEGML-TAFLEAPGGNAGVVlllVGAALGAVftfaYSARLVLGAF 435
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-456 |
2.01e-50 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 184.53 E-value: 2.01e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 89 IDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 168
Cdd:PRK08376 88 VDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDT 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 169 PVAAKACQKAFVTNRVGDFGLLLGILGFYwvtGSFEFRDLFQIFNNLISNNevdFLFVTLCAVLLFAGAIAKSAQFPLHV 248
Cdd:PRK08376 168 WEAIEAGIKYMFVGSLASSMVLLGIALLY---GQYGTLNMAYLAVKMSENP---TVVAKIALALFIAGLAMKSGAVPVHM 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 249 WLPDAM-EGPTPISALIHAATmvAAGIFLVARLmpLFLVIPPIMN------FISLIGIITVFLGATLALAQKDIKRGLAY 321
Cdd:PRK08376 242 WLPDAYpAAPSSISAMLLVIK--QAGLYALARV--LFSIYGPAINlatvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAY 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 322 STMSQLGYMMLALGMG--SYRS-------------ALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGG 386
Cdd:PRK08376 318 HSVSQIGYMLLGLGVGlaALGDpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT---------RNLNELGG 388
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 387 LTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMCRIYLLTFEG 456
Cdd:PRK08376 389 LARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFG 458
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-456 |
1.40e-47 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 176.70 E-value: 1.40e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 4 TYQYAWIIPFLPLPVPMLIGLGLLLfptaTKSLRRMWAFQSVLLLSIVMIFSMNLSIQQINSSSVYQYVWSwiinnDFSL 83
Cdd:PRK12667 2 AMDIVGLTPILLVLFAFLLPLLSIL----LKGNRKIQKIYALLVSLITLILSILLFIQVYSSNKPIVYLFG-----GWPA 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 84 EFG--YLIDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLL 161
Cdd:PRK12667 73 PIGivYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 162 IGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLiSNNEVDFLFVTLCAVLLFAGAIA-- 239
Cdd:PRK12667 153 VAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGL-SFPLTGGLAGNPPLALGVALALAlw 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 240 ----KSAQFPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLM--------PLFLVIPPIMNFISLIGIITVFLGA 306
Cdd:PRK12667 232 aftiKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGA 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 307 TLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIHSMetlvgycpkKSQNMVL 383
Cdd:PRK12667 311 LMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAA---------GTRDIDE 381
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2786557249 384 MGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKdEILNDSWLYS--PIFAIIAWSTAGLTAFYMCRIYLLTFEG 456
Cdd:PRK12667 382 LAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSK-LLLFNALLESgfYLPALVLLIASAISLVGYFRAWYSLFFG 455
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
10-364 |
7.91e-42 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 159.86 E-value: 7.91e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 10 IIPFLPLPVPMLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIQQINSSSvyqyvwSWIINndfslefgyli 89
Cdd:PRK08168 5 VCALLPAVLMSLAAGGLLLSRWLTRALWRIAQAASLAGLFLALLGLVLFATGAAWPAA------AWLEV----------- 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 90 DPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRP 169
Cdd:PRK08168 68 SGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRP 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 170 VAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNnevdfLFVTLCAVLLFAGAIAKSAQFPLHVW 249
Cdd:PRK08168 148 FARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAHLAAQGAS-----PSLQAAALLLVLAVILKTAQLPVHGW 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 250 LPDAMEGPTPISALIHAAtMVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGY 329
Cdd:PRK08168 223 LIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGF 301
|
330 340 350
....*....|....*....|....*....|....*
gi 2786557249 330 MMLALGMGSYRSALFHLITHAYSKALLFLGSGSVI 364
Cdd:PRK08168 302 MLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
10-417 |
1.50e-40 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 155.27 E-value: 1.50e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 10 IIPFLPLPVPMLIGLGLLLFPTATKSLRR---MWAFQSVLLLSIVMIFsmnlsiqqinsssvyqyvwsWIINNDFSLEFG 86
Cdd:COG1007 4 LLALLPEIILLLGALVLLLLDLFLPRRSRrllAGLALLGLLLALALLL--------------------LALGGGTGTAFG 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 87 --YLIDPLTSIMSILITTVGILVLIYSDNYMShDHGYLRF-FAYMSFFSTS-MLGLVTSSNLIQIYIFWELVGMCSYLLI 162
Cdd:COG1007 64 gmFVVDGFALFFKLLILLAALLVLLLSRDYLE-RRGLLRGeFYALLLFATLgMMLMASANDLLTLFLGLELLSLSLYVLV 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 163 GFWFTRPVAAKACQKAFVTnrvGDFG---LLLGILGFYWVTGSFEFRDLFQIfnnlISNNEVDFLFVTLCAVLLFAGAIA 239
Cdd:COG1007 143 AFRRDDRRSSEAALKYFLL---GALSsgfLLYGISLLYGATGSLNLAGIAAA----LAAGGANSPLLLLGLVLVLAGLAF 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 240 KSAQFPLHVWLPDAMEG-PTPISALIHAATMVAAgIFLVARLM--PLFLVIPPIMNFISLIGIITVFLGATLALAQKDIK 316
Cdd:COG1007 216 KLSAVPFHMWTPDVYEGaPTPVTAFLATAPKIAA-FAALLRLLveAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVK 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 317 RGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLgsgsVIhsmeTLVGYCPKKSQNMVLMGGLTKHVPI 393
Cdd:COG1007 295 RMLAYSSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFA----VI----LLLSRKGGEAEEIEDLAGLARRSPL 366
|
410 420
....*....|....*....|....
gi 2786557249 394 TKNSFFLGTLSLCGIPPLACFWSK 417
Cdd:COG1007 367 LALAMTIFLLSLAGIPPTAGFFGK 390
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
89-456 |
4.27e-39 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 154.28 E-value: 4.27e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 89 IDPLTSIMSILITTVGILVLIYSDNYMSHDHGY----LRFFayMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGF 164
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFREYEGKgpgaMGFF--YNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 165 WFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDlfqifnnlISNNEVDFLFVTLCAVLLFAGAIAKSAQF 244
Cdd:PRK06521 156 NHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAA--------MRAAHLSPFWASLVFLLALFGFGAKAGLV 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 245 PLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLMPLFLVIP------PIMNFisliGIITVFLGATLALAQKDIKR 317
Cdd:PRK06521 228 PLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPgwwwgvLVLAL----GAISAVLGVLYALAEHDLKR 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 318 GLAYSTMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVL 383
Cdd:PRK06521 303 LLAYSTIENIGIIFVGLGLAmvfiaygmpllaalALTAALYHLLNHALFKSLLFLGAGAVLHATGT---------RDMEK 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 384 MGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEIL--------NDSWLYS---PIFAIIAWSTAGLTAFYMCRIYLL 452
Cdd:PRK06521 374 LGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLqsllsspgLPQWGLKlavPIAAAMLALTAALAAMCFVKFYGI 453
|
....
gi 2786557249 453 TFEG 456
Cdd:PRK06521 454 TFLG 457
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
10-417 |
4.17e-38 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 148.43 E-value: 4.17e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 10 IIPFLPLPVPMLIGLGLLLFPTATKSLRRmWAFQSVLLLSIVMIFsmnlsiqqinsssvyqyVWSWIINNDFSLEFG--Y 87
Cdd:PRK05777 8 LILLLPELILLGAAVVLLLIDAFVRRHSR-RATLAVLALLLALVA-----------------LLFVLGAAGGGTAFGgmL 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 88 LIDPLTSIMSILITTVGILVLIYSDNYMShDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFT 167
Cdd:PRK05777 70 VVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAALRRD 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 168 RPVAAKACQKAFVtnrVGDFG---LLLGILGFYWVTGSFEFRDLFQIFNNLISNNevdfLFVTLCAVLLFAGAIAKSAQF 244
Cdd:PRK05777 149 RRRSLEAAIKYFV---LGALAsgfLLYGMSLLYGATGSLSFAGIAKALADGSGNS----LLLLFGLVFLLVGLAFKLSAV 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 245 PLHVWLPDAMEG-PTPISALIHAATMVAA-GIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYS 322
Cdd:PRK05777 222 PFHMWTPDVYEGaPTPVTAFLATAPKIAAfAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYS 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 323 TMSQLGYMMLALGMGS---YRSALFHLITHAYSKallfLGSGSVIHSMETLVGYCPKKSQnmvlMGGLTKHVPITKNSFF 399
Cdd:PRK05777 302 SIAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMT----LGAFGVISLLRRKGGEAESISD----FAGLSKRSPLLAAVMT 373
|
410
....*....|....*...
gi 2786557249 400 LGTLSLCGIPPLACFWSK 417
Cdd:PRK05777 374 IFMLSLAGIPPTAGFWGK 391
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
74-417 |
8.63e-37 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 146.68 E-value: 8.63e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 74 SWIINNDFSLEFGYLIdpLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFfsTSMLGLVTSSNLIQIYIFWEL 153
Cdd:PRK08668 54 LTLFFGGFKLTFTLTH--LSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSL--AGVLGVFLANDLLTLYIFWEI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 154 VGMCSYLLIGFWFTRpvAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNevdflFVTLCAVLL 233
Cdd:PRK08668 130 MTFSSFMMVPMGKKE--SRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLINDTSTG-----FALIVFLFL 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 234 FAGAIAKSAQFPLHVWLPDAM-EGPTPISALIHAA--TMVAAGIFLVARLMP---LFLVIPPIMN------FISLIGIIT 301
Cdd:PRK08668 203 LAFGVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtkLFSEFGTYRGvplfnyILAWLGNIS 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 302 VFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkks 378
Cdd:PRK08668 283 IIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGtslGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGT--------- 353
|
330 340 350
....*....|....*....|....*....|....*....
gi 2786557249 379 QNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSK 417
Cdd:PRK08668 354 TKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASK 392
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
11-459 |
1.04e-35 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 141.49 E-value: 1.04e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 11 IPFLPLP--VPMLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIFsmnLSIQQINSSSVYQYVW--SWIINNDFSLEFG 86
Cdd:PRK05846 3 WPLLSLLifLPLIGGLLVLLTERFGARLARWIALIGTLLTLLLSLV---LWIGFDSSNAGFQFVEkhPWIPRFGISYHLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 87 ylIDPLTSIMSILITTVGILVLIYSDNYMSHDHGylRFFAYMSFFSTSMLGLVTSSNLIQIYIFWE--LVGMcsYLLIGF 164
Cdd:PRK05846 80 --VDGISLLLVVLTALLTPLAVLASWEEIKKRVK--FYMAALLWLEGGVIGVFAALDLLLFYVFFEamLIPM--YFLIGV 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 165 W--FTRPVAAkacQKAFVTNRVGDFGLLLGILGFYWV----TGSFEFRDLFQifnNLISNNEVDFLFVTLcavlLFAGAI 238
Cdd:PRK05846 154 WggKNRIYAA---TKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLN---LPLPPGVQYWLFLAF----FIAFAV 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 239 aKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIF-LVARLMPLF-----LVIPPIMnfisLIGIITVFLGATLALAQ 312
Cdd:PRK05846 224 -KMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYgLLRFSLPLFpdashEFAPIII----TLGVIAIIYGALVALAQ 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 313 KDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVIHSMETLvgycpkksqNMVLMGGLTK 389
Cdd:PRK05846 299 TDIKKLIAYSSISHMGFVTLGIFAGNQLGiqgAIFQMISHGLSSAALFLLVGVLYDRLHTR---------DIADYGGLAK 369
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 390 HVPITKNSFFLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMCRIYLLTFEGHLN 459
Cdd:PRK05846 370 VMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVK 439
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
20-417 |
2.96e-35 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 142.18 E-value: 2.96e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 20 MLIGLGLLLFPTATKSL---RRMWAFQSVL-LLSIVMIFSMNLSIQQINSSSVYQYVWSWIINNDFSLEfgylIDPLTSI 95
Cdd:PRK08667 6 FLGAILLLLAAAVIPLVfrhKRKRVWQSVLwLVIAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITFH----IDRLAAF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 96 MSILITTVGILVLIYSDNYMSHDHGYLR---FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAA 172
Cdd:PRK08667 82 FIILIGLVSLCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQ 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 173 KACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFrdlfqifnnliSNNEVDFLFVTLCAVLLFAGAIAKSAQFPLHVWLPD 252
Cdd:PRK08667 162 RAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL-----------SPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPY 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 253 AMEG-PTPISALIhAATMVAAGIFLVARLmpLFLVIPPIMNF---ISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLG 328
Cdd:PRK08667 231 AHPAsPSNVSALM-SGVMLKVAVYGLVRF--LMDVLSPELWWgvlILLAGSISALLGVIYALKEHDLKGLLAYSSIENIG 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 329 YMMLALG--------------MGSYRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGLTKHVPIT 394
Cdd:PRK08667 308 IILMGIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHATGT---------RNIEKMGGLVKLMPYT 378
|
410 420
....*....|....*....|...
gi 2786557249 395 KNSFFLGTLSLCGIPPLACFWSK 417
Cdd:PRK08667 379 SALFLVGAVSIAALPPFNGFASE 401
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-421 |
8.38e-34 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 136.10 E-value: 8.38e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 10 IIPFLPLPVPMLIGLGLLLFPTATKslrRMWAFQSVLLLSIVMIFSMNLSIqqINSSSVYQYVWSWIINNDFSLEFGYLI 89
Cdd:PRK06589 7 TTPNNLLLSTLLVGALNLTSPFATK---KDSFIRNFLLITISIFFFGNILL--IDLLFLKGIRAQFELMDFGNYSIGLHL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 90 DPLTSIMSILITTVGILVLIYSDNYMSHDHGYL--RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFT 167
Cdd:PRK06589 82 EPLGLIFLLLIGFLWICALLYTPKYLAINNIDSssRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAFLIGHTRN 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 168 RPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDlfqifNNLISNNEVDFLFvtlcavLLFAGAIAKSAQFPLH 247
Cdd:PRK06589 162 NISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFVS-----GGLFSKNQSIILL------LMFIYGIAKTAIFPVH 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 248 VWLPDAMEGPTPISALIHAATMVAAGIFLVARL------MPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAY 321
Cdd:PRK06589 231 SWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKIllyifgLSYLQRIFAEFNWLIFIPIVSIFYSSLKALKTDNIKKILAY 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 322 STMSQLGYMMLALGM---GSYRSALFHLITHAYSKALLFLGSGSVihsmetlvgYCPKKSQNMVLMGGLTKHVPITKNSF 398
Cdd:PRK06589 311 STISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSI---------YSLKKEDQVDKLHGTSKSFPLISFII 381
|
410 420
....*....|....*....|...
gi 2786557249 399 FLGTLSLCGIPPLACFWSKDEIL 421
Cdd:PRK06589 382 SISSLSLIGIPIFSGFISKFLIL 404
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
18-465 |
1.22e-33 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 135.45 E-value: 1.22e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 18 VPMLIGLGLLLFPTATKSLRRMWAFQS---VLLLSIVMIFSMNLSiqqinsSSVYQYVWSWIINNDFSLEFGYLIDPLTS 94
Cdd:TIGR01972 7 LPLIGALLILLLPSNKDGKARWIALVValaTLLLSLLLLFQFDPT------GSGFQFTEDIPWIPALGISYHLGVDGISL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 95 IMSILITTVGILVLIYSDNYMSHDHGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWfTRPVAAKA 174
Cdd:TIGR01972 81 LLVLLTALLTLLAILASWESIQKRVKE--FYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVW-GGPNRIYA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 175 CQKAFVTNRVGDFGLLLGILGFYWVTG-SFefrDLFQIFNNLISNNEVDFLFVtlcaVLLFAGAIaKSAQFPLHVWLPDA 253
Cdd:TIGR01972 158 AMKFFLYTLAGSLLMLLAILGLYFLGGgTF---DLLELLNLPLPFGVQTWLFL----AFFIAFAV-KVPLFPLHTWLPDA 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 254 M-EGPTPISALIHAATMVAAGIFLVARLMPLF----LVIPPIMNFISLIGIItvfLGATLALAQKDIKRGLAYSTMSQLG 328
Cdd:TIGR01972 230 HvEAPTAGSVILAGVLLKMGTYGFLRFNLPLFpdasLYFAPVLAALGVIAII---YGALIALAQTDIKRLIAYSSISHMG 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 329 YMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGLTKHVPITKNSFFLGTLSL 405
Cdd:TIGR01972 307 FVLLGIFSFNELGisgAVFQMISHGLITAALFLLVGVLYERAHT---------RDIAKYGGLANKMPVLAAFFMLFAMAS 377
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 406 CGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMCRIYLLTFEGHLNVHFQNY 465
Cdd:TIGR01972 378 LGLPGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAE 437
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
10-416 |
4.80e-33 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 133.52 E-value: 4.80e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 10 IIPFLPLPVPMLIGLGLLLFPtatksLRRMWAFQSVLLLSIVMIFSMNLSIQQINSSsvyqyvwswiinNDFSLEFGYLI 89
Cdd:PRK06458 5 ILFALLLLIPLLASLLLFALR-----KRRLVATLNVLGITLTLILALWLVFTVPDAG------------EIFAAGLWFFI 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 90 DPLTSIMSILITTVGILVLIYSDNYMSH--DHG-----YLRFFAYM-SFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLL 161
Cdd:PRK06458 68 DDLNVFFLALIGVVGFLTSLYSIGYMRHevEHGelspvTLRLYYGMyQLFLFTMLLALTSNNLGLMWVAIEATTLSSALL 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 162 IGFWFTRpVAAKACQKAFVTNRVG-DFGLLLGILGFYWVTGSFEFRDLFQIFNNLIS-NNEVDFLFVTLCAVLLFAGAIA 239
Cdd:PRK06458 148 VGIYRTR-ASLEAAWKYIIICSVGvAFALFGTILVYANAATVMGDGEMAILWTELLKhASLLDPTLMKLAFVFLLIGFGT 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 240 KSAQFPLHVWLPDA-MEGPTPISAL------------IHAATMVAAGIFLVARLMPLFLVIppimnfisliGIITVFLGA 306
Cdd:PRK06458 227 KVGLFPMHAWLPDAhSEAPSPVSALlsgvllnvalyaVLRYYILIDAAIGSDFPGRLLLIF----------GLLSVLVAA 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 307 TLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIHSmetlvgycpKKSQNMVL 383
Cdd:PRK06458 297 FFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGplgIFAALLHMLNHSLTKSAIFFASGNVLQK---------YGTRDINV 367
|
410 420 430
....*....|....*....|....*....|...
gi 2786557249 384 MGGLTKHVPITKNSFFLGTLSLCGIPPLACFWS 416
Cdd:PRK06458 368 IRGLLKVSPLTGWGLMLGALAIAGMPPFGVFIS 400
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
19-456 |
4.39e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 130.46 E-value: 4.39e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 19 PMLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIQQINSssvyqyvwswiinndfsLEFGYLIDPLTSIMSI 98
Cdd:PRK07234 12 PFLLGFAIYLLPKLDRNLALGMAIVSAVYALGLVASMVPLELTLLDN-----------------FGVTLRADALSGYFIL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 99 LITTVGILVLIYSdnymsHDHGYLRFFAymsFFSTSMLGLV----TSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKA 174
Cdd:PRK07234 75 TNALVTLAVIFYC-----WESAKTRFFY---AQLLILHGSVnaafVCADLISLYVALEVLSIATFLLVAYPRTDRAIWVG 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 175 CQKAFVTNRVGDFgLLLGILGFYWVTGSFEFRDLFQIFNNLISnnevdflfvtlcavLLFAGAIAKSAQFPLHVWLPDAM 254
Cdd:PRK07234 147 LRYLFYSNVAMLF-YLIGAVLVYQANGTFAFSGLATADPEAFA--------------LIALGLLVKGGIFVSGLWLPLTH 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 255 EGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPImnfISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLAL 334
Cdd:PRK07234 212 SEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLI---VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAP 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 335 GMGsyrsALFHLiTHAYSKALLFLGSGsvihsmeTLVGYCPKKSQNMvlMGGLTKHVPITknsffLGTLSLCGIPPLACF 414
Cdd:PRK07234 289 LVG----GLYAL-AHGLVKSTLFLCAG-------ALPSRNFTELISQ--MLGIGKWIPLT-----MASFSIAGFPLLAGF 349
|
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 2786557249 415 WSKDEILndsWLYSPIFAIIAWSTAGLTAFYMCRIYLLTFEG 456
Cdd:PRK07234 350 VSKVLTL---KNLLPWQAIALNLAAVGTAASFWKFIFLPFSA 388
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
81-367 |
2.35e-31 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 129.27 E-value: 2.35e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 81 FSLEFGYLIDPLtsIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYL 160
Cdd:MTH00095 37 LSLKFNFYFNSL--LFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFF 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 161 LIGFWFTRPVAAKACQKAFvTNRVGDFGLLLGILGFYWVTGSFEfrdlfqifnnlisnneVDFLFVTLCAVLLFAGAIAK 240
Cdd:MTH00095 115 LVLFYNNWDSNSGAMNTAL-TNRIGDFFIFLFFSGFIFSSYYFF----------------SFSFFSSSMILMLLLTSFTK 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 241 SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPpIMNFISLIGIITVFLGATLALAQKDIKRGLA 320
Cdd:MTH00095 178 SAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMN-VMKIMLLIGLFTMFFSSLSALVEEDMKKVVA 256
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2786557249 321 YSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSM 367
Cdd:MTH00095 257 LSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSN 303
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
89-421 |
1.88e-30 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 126.03 E-value: 1.88e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 89 IDPLTSIMSILITTVGILVLIYSDNYMSHD--HGYLRFFAYMSFFSTsmlGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 166
Cdd:PRK08377 76 IGPFAALFVLIIAIVSFIMSIFSLKAVEVEpiDKYAMLFLLLMLGAT---GMIATGDIFNLFVFMEITAITAYALTAYNK 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 167 TRPvAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNlisnneVDFLFVTLCAVLLFAGAIAKSAQFPL 246
Cdd:PRK08377 153 TGE-AAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGT------IDPTVAQVGLALLIFGLAVEAELFPL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 247 HVWLPDAMEG-PTPISALIhAATMVAAGIFLVARLMPLFLVIPPIMNFISLI---GIITVFLGATLALAQKDIKRGLAYS 322
Cdd:PRK08377 226 NAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVLKLViimATLTVFFAELSALRQKNVKRMIAYS 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 323 TMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIHSMetlvgycpkKSQNMVLMGGLTKHVPITKNSFF 399
Cdd:PRK08377 305 SIGQVGMIALALALGTqagVDAGVFHMINHAIVKALLFLAVGYVGITL---------GGTEIEKFEGLGKRMPLTALALT 375
|
330 340
....*....|....*....|..
gi 2786557249 400 LGTLSLCGIPPLACFWSKDEIL 421
Cdd:PRK08377 376 IGALSTVGIPLFNVFWSKFRII 397
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
10-449 |
1.01e-28 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 120.44 E-value: 1.01e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 10 IIPFLPLPVPMLIGLGLLLFPTATKSLRRMwAFQSVLLLSIVMIFSMNLSIQQINSSSVYQYVWSWIINNDFSLefgyli 89
Cdd:TIGR01770 1 LIAILPEIILLLGAFILLLYGLFYSRKKRN-PLLLKNLSYIVLLSALVSLFLTLQYAAYLFTGFSFFIVDNFAL------ 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 90 dpltSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRP 169
Cdd:TIGR01770 74 ----LIKLILLLSTLLTFFFALSYLSKEKINKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 170 VAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVDFLfvtlcAVLLFAGAIA-KSAQFPLHV 248
Cdd:TIGR01770 150 FSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNISLLLL-----GIVLILVGLLfKLSAVPFHM 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 249 WLPDAMEG-PTPISALIHAATMVAAGIFLVaRLMPLFLV--IPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMS 325
Cdd:TIGR01770 225 WVPDVYEGaPTPVTAFFSIVPKIAIFAVFL-RLFLYILFgfSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSIS 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 326 QLGYMMLALGMGS---YRSALFHLITHAYSKALLFlgsgSVIHSMETlvgYCPKKSQNMVLMGGLTKHVPITKNSFFLGT 402
Cdd:TIGR01770 304 HVGYILIGLLAGTlegIKAVLFYIFIYALMSLGAF----GVLSLLRS---YKDEWIEYISDFAGLFKTNPILAILILIFM 376
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 2786557249 403 LSLCGIPPLACFWSKDEIL-----NDSWLYSPIFAIiawsTAGLTAFYMCRI 449
Cdd:TIGR01770 377 FSLAGIPPLAGFFGKFYVFfallkSGLYWLAVIAVL----TSVIGAFYYLRV 424
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
14-456 |
3.33e-28 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 119.28 E-value: 3.33e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 14 LPLPVPMLIGLgLLLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIQQinsSSVYQYVWSWiiNNDFSLEFgyLIDPLT 93
Cdd:PRK07691 8 LPILIPVITAI-LLIFLGKRPIIQRYVALIGSLLTLVAAIILVANVYKH---GIQTLELGNW--KAPFGIVF--VADMFA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 94 SIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRpVAAK 173
Cdd:PRK07691 80 ALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTK-IQLR 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 174 ACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVdflFVTLCAVLLFAGAIAKSAQFPLHVWLPDA 253
Cdd:PRK07691 159 ESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTG---LITVVAILFLFVFATKAGLFPLYFWLPGS 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 254 MEGP-TPISALIhAATMVAAGIFLVARLMPLFLVIPPIM--NFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYM 330
Cdd:PRK07691 236 YYAPpIAIAALF-GALLTKVGVYAIARTFTLFFSHDTSFthYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVI 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 331 MLALGMG---SYRSALFHLITHAYSKALLFLGSGSVIHsmetLVGYCPKKSqnmvlMGGLTKHVPITKNSFFLGTLSLCG 407
Cdd:PRK07691 315 LVGVAMMtesGMIGAIYYLIHDMIVKAALFLLIGIMIK----ITGTTDLKK-----MGGLIKRYPVLGWMFFIAALSLAG 385
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 2786557249 408 IPPLACFWSKDEILNDSWLY-SPIFAIIAWSTAGLTAFYMCRIYLLTFEG 456
Cdd:PRK07691 386 IPPLSGFYGKFFIVEGTFEAgFYVSGIIVLLSSLLVLYSVIKIFLKGFWG 435
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
89-387 |
1.24e-27 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 117.44 E-value: 1.24e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 89 IDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSF--FSTSMLGLvtSSNLIQIYIFWELVGMCSYLLIG--- 163
Cdd:PRK08601 70 LDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFttGFASLAWL--SGDLRLMALCWGATLLGLTLLIGlnk 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 164 FWFTRPVAAKACQKAFVtnrVGDFGLLLGILGFYWVTGSFefrdlfQIFNNLISNNEVDF--LFVTLCAVLLFAGAIAKS 241
Cdd:PRK08601 148 GWKVAREAAKISGMLFL---ISWLALALAIVWLFIATGEW------QLTSVLSNENLAQLgtWEKTGINLLLILAVMIPA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 242 AQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvARLMPLFL-VIPPIMNFIslIGIITVFLGATLALAQKDIKRGLA 320
Cdd:PRK08601 219 AQWPFQRWLIESAVAPTPVSAIMHAGLVNAGGIML-TRFSPLFHdDIAQILLLI--FASISVLIGTGISLVQVDYKRQLV 295
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2786557249 321 YSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETLVGYCPKKSQNMVLMGGL 387
Cdd:PRK08601 296 GSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFNIVKQANEKKSYLWIVVGRV 362
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
10-417 |
5.21e-27 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 116.53 E-value: 5.21e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 10 IIPFLPLPVPMLIGLGLLLFPTATksLRRMWAFqSVLLLSIVMIFSMnlsiqQINSSSVYQYVwswiinnDFSLEFgYLI 89
Cdd:PRK12668 2 MLDFLPPALVFIAGALLVPFLPGR--ARKALLL-LAPVLAVLAVLTV-----PEGTYLTVTFL-------GFDLVL-GRV 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 90 DPLTSIMSILITTVGILVLIYSdnymSHDHGYLRFFAYMSFFSTSmLGLVTSSNLIQIYIFWELVGMCSYLLIgfWFTR- 168
Cdd:PRK12668 66 DKLSRVFGLIFGIMAFIGVIYA----LHVKDPGQHVAALLYVGSA-LGAVFAGDLLTLFVFWELMAFTSTFLV--WARGt 138
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 169 PVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFrDLFQIFNnlisnnevdflfvTLCAVLLFAGAIAKSAQFPLHV 248
Cdd:PRK12668 139 KAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAF-GAIAGLG-------------GTAAWLILIGFGVNAAFPPLHA 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 249 WLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIppimnfISLIGIITVFlGATLALAQKDIKRGLAYSTMSQLG 328
Cdd:PRK12668 205 WLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTELL------IYIGAAMAVY-GVFFALLENDLRRLLSYHIVSQVG 277
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 329 YMMLALGMGS---YRSALFHLITHAYSKALLFLGSGSVIHSMETlvgycpkksQNMVLMGGLTKHVPITKNSFFLGTLSL 405
Cdd:PRK12668 278 YMVAGIGIGTalaINGAVAHAFNHILYKGLLFMSAGAVLYRTGT---------EKLTELGGLYRSMPLTALFCLVGALSI 348
|
410
....*....|..
gi 2786557249 406 CGIPPLACFWSK 417
Cdd:PRK12668 349 SAFPLFSGFVSK 360
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
11-454 |
1.36e-24 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 108.11 E-value: 1.36e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 11 IPFLPLPVPMLIGLGLLLFPTATKsLRRMWAFQSVLLLSIVmifSMNLSIQQINSSSVYQYVWSWiinndfSLEFG--YL 88
Cdd:PRK12663 5 LLILPMLLPLLCGLVLVFLRNRDR-LQRYLAIGTLTILTLI---SLALLIYVQRHGPITLDFGGW------LPPFGiqFT 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 89 IDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTR 168
Cdd:PRK12663 75 GDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLITLGQER 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 169 pVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVdflfVTLCAVLLFAGAIaKSAQFPLHv 248
Cdd:PRK12663 155 -EQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATL----TTIALLFLLAFGM-KAALFPFM- 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 249 WLPDAMEGP-TPISALIhAATMVAAGIFLVARLMPLFLVIPPIMN--FISLIGIITVFLGATLALAQKDIKRGLAYSTMS 325
Cdd:PRK12663 228 WLPAAYHTPnTEVAALF-AALLTKVGIYALIRVFTLLFPQERELLhpLLATMAAITMVIGALGALAYKDIRRIAGYQVIS 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 326 QLGYMMLALGMGSY---RSALFHLITHAYSKALLFLGSGSVIHsmetLVGYcpkksQNMVLMGGLTKHVPITKNSFFLGT 402
Cdd:PRK12663 307 SIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLVR----LTGY-----RSLQYLGGLYRKEPLFGALFLILI 377
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 2786557249 403 LSLCGIPPLACFWSKDEIL-----NDSWlyspIFAIIAWSTAGLTAFYMCRIYLLTF 454
Cdd:PRK12663 378 FAIGGLPPFSGFWGKVLLVqgaldNGAY----ILLALMLITSLITMYSLFRIFFLAY 430
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
44-364 |
2.55e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 107.66 E-value: 2.55e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 44 SVLLLSIVMIFSMNLSIQQINSSSVYqyvWSWIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLR 123
Cdd:MTH00063 1 SVLLVSLLLCLLIFFLFLVGVSSSVS---LNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 124 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTrPVAAKACQKAFVTNRVGDFGLLLgILGFYWVTGSF 203
Cdd:MTH00063 78 LNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFL-LIGLSCWGGSG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 204 EFrdlfqifnnlisnnevdflfvtLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARlMPL 283
Cdd:MTH00063 156 SF----------------------LCCLFFFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMR-YDY 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 284 FLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSV 363
Cdd:MTH00063 213 LLGFSWLSIFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDV 292
|
.
gi 2786557249 364 I 364
Cdd:MTH00063 293 M 293
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-449 |
2.17e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 101.35 E-value: 2.17e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 11 IPFLPLPVPMLIGLGLLLfptaTKSLRRMWAFqSVLLLSIVMIFSMNLSIQQINSSSVYQYVWSWIINNDFSLEfgylID 90
Cdd:PRK12662 5 LPILQVIIPLLSAVVCAL----LKNRKLVKII-SCIVVAVSFFIALVLFVQVYSGGVIKYSLGGWGPPYGIELR----VD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 91 PLTSIMSILITTVGILVLIYSdNYMSHD----HGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 166
Cdd:PRK12662 76 ILSATMLVLVNFIAVMSVLYG-IYPNRKeisvNKIPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGR 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 167 TRpvaaKACQKAF---VTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNevdflFVTLCAVLLFAGAIAKSAQ 243
Cdd:PRK12662 155 DK----KALVAAFeylIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNR-----AIQIGVLFIMVGLFIKAAL 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 244 FPLHVWLPDAM-EGPTPISALIhAATMVAAGIFLVARLM------PLFLVIPPIMNFISLIGIITVFLGATLALAQKDIK 316
Cdd:PRK12662 226 FPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIK 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 317 RGLAYSTMSQLGYMMLALGMGSYR---SALFHLITHAYSKALLFLGSGSVIHSMETLvgycpkksqNMVLMGGLTKHVPI 393
Cdd:PRK12662 305 RIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFGTT---------KLEDCLNLWKSMPK 375
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2786557249 394 TKNSFFLGTLSLCGIPPLACFWSKDEILN---DSWLYSPIFAIIAWStaGLTAFYMCRI 449
Cdd:PRK12662 376 ITLAFVLLSLSLIGMPPTSGFVAKWYILDafiKSNAWIGLVVLLVGS--GLSVIYVWKI 432
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
190-454 |
3.15e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 91.57 E-value: 3.15e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 190 LLGILGFYWVTGSFEFRDLFQIFNNLISNnevdfLFVTLCAVLLFAGAIaKSAQFPLHVWLPDAM-EGPTPISAlIHAAT 268
Cdd:PRK12665 178 LIGIALVYAATGTLNMADLAVRLDELPSG-----TRTALFAVLLVAFGI-KAAVFPLSFWLPDSYpTAPAPVTA-VFAGL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 269 MVAAGIFLVARLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFH 345
Cdd:PRK12665 251 LTKVGVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYY 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 346 LITHAYSKALLFLGSGSVihsmETLVGycpkkSQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEIL---- 421
Cdd:PRK12665 331 VAHHITVQTTLFLVVGLI----ERQAG-----SSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLeaga 401
|
250 260 270
....*....|....*....|....*....|....*.
gi 2786557249 422 -NDSWLyspIFAIIAWS--TAGLTAFYMCRIYLLTF 454
Cdd:PRK12665 402 eDGTWL---AWALVAGGvvTSLLTLYAVARVWTKAF 434
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
46-464 |
7.14e-19 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 90.53 E-value: 7.14e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 46 LLLSIVMIFSMNLSIQQINSSSVYqyvwSWIINNDFSLEFGylIDPLtSIMSILITTVGILVLIYSDNYMSHDHGYlrFF 125
Cdd:PRK06473 40 LLLSLVLAFQFDPGNPNQQFTEFI----PWIDSLGLSYHLG--VDGL-SLPLLVLNSLLTLIAIYSSDESIQRPRF--YY 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 126 AYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWfTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEF 205
Cdd:PRK06473 111 SLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSF 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 206 RdlfqiFNNLISNNEVDFLFVTLCAVLLFAGAIaKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARL-MPL 283
Cdd:PRK06473 190 D-----YEPLRSHTLPLSTQLLLLAPILVGFGI-KIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRFgVGL 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 284 FL----VIPPimnFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALL 356
Cdd:PRK06473 263 FPeawvYLAP---WLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISALL 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 357 FLgsgsvihsmetLVGYCPKK--SQNMVLMGGL---TKHVPITKNSFFLGTLSLCGIPPLACFWSKDEILNDSWLYSPIF 431
Cdd:PRK06473 340 FL-----------LVGVVYKKtgSRDVDVLRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQ 408
|
410 420 430
....*....|....*....|....*....|...
gi 2786557249 432 AIIAWSTAGLTAFYMCRIYLLTFEGHLNVHFQN 464
Cdd:PRK06473 409 TLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSN 441
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
16-465 |
9.20e-19 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 90.16 E-value: 9.20e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 16 LPVPMLIGLGLLLFPTATKSLRRMWAFQSVLLL--SIVMIFSMNLSiqqiNSSSVYQYVWSWIINNDFSLEFGylIDPLt 93
Cdd:PRK07363 8 LPILGAIIIGFFPGNLPSARLRQITLVFAVLVLawSLFLLTQFDLS----DPGMQFQEYLPWNEPLGLSYSLG--VDGL- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 94 SIMSILITTVGILVLIYSDNYMSHDHGYlrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPvAAK 173
Cdd:PRK07363 81 SLPLLVLNSLLTWIAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGGEK-RGY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 174 ACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVDFLfvtlcaVLLFAGAIAKSAQFPLHVWLPDA 253
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLILL------TGLLLGFGIKIPLVPLHTWLPDA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 254 MEGPTPISALIHAATMVAAGIFLVARL-MPLFlviPPIMNFIS----LIGIITVFLGATLALAQKDIKRGLAYSTMSQLG 328
Cdd:PRK07363 232 YTEASPAVAILLGGVLAKLGTYGLLRFgLQLF---PQTWSLVApglaIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 329 YMMLALGMGSYRS---ALFHLITHAYSKALLFlgsgsvihsmeTLVGYCPKK--SQNMVLMGGLTKHV---PITKNSFFL 400
Cdd:PRK07363 309 YILVAAAAGTQLSllgAVAQMISHGLILALLF-----------HLVGIVERKvgTRDLDVLNGLMNPIrglPLTSALLVL 377
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2786557249 401 GTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMCRIYLLTFEGHLNVHFQNY 465
Cdd:PRK07363 378 AGMASAGIPGLVGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGRLDNKLAYY 442
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
45-478 |
2.41e-18 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 88.91 E-value: 2.41e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 45 VLLLSIVMIFSMNLSIQQINSS------------SVYQYVWSWIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSD 112
Cdd:CHL00049 21 ILIFGLILLLMIDLTSDQKDIPwlyfisstslvmSITALLFQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 113 NYMSHDHGYLRFFayMSFFSTSMLG---LVTSSNLIQIYIFWELVGMCSYLLIGFwftrpvaakaCQKAFVTNRVGDFGL 189
Cdd:CHL00049 101 EYIECTEMAITEF--LLFVLTATLGgmfLCGANDLITIFVALECLSLCSYLLSGY----------TKKDVRSNEATMKYL 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 190 LLG-----IL--GFYWVTG-SFEFRDLFQIFNNLISNNEVDFLFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEG-PTPI 260
Cdd:CHL00049 169 LMGgasssILvyGFSWLYGlSGGEIELQEIVNGLINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 261 SALIhAATMVAAGIFLVARLMPLflVIPPIMN----FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGM 336
Cdd:CHL00049 249 VAFL-SVTSKVAASALATRIFDI--PFYFSSNewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIV 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 337 GSYRSALFHLITHAYSKALLFLGSGSVIHSMETLVGycpkkSQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWS 416
Cdd:CHL00049 326 GDSNDGYASMITYMLFYIFMNLGTFACIVLFGLRTG-----TDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFG 400
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2786557249 417 KDEILNDSW---LYSPIFaiIAWSTAGLTAFYMCRIYLLTFEGH---LNVHFQNYSGKRNTPLYSISL 478
Cdd:CHL00049 401 KLYLFWCGWqagLYFLVS--IGLLTSVISIYYYLKIIKLLMTGRnqeITPYVRNYRRSPLRSNNSIEL 466
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
43-421 |
1.12e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 86.61 E-value: 1.12e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 43 QSVLLLSIVMIFSMNLsIQQINSSSVYQYVWSWIINNDFSLEFGYLIdpltsIMSILITTVGILVLIYSDNYMSHDHGYL 122
Cdd:MTH00199 24 LSTLKLSIGVLLLIGL-IVELNSLNLFQSDKVLDGTNGLLLTNSWII-----ISKIIIIIGSISILLMGSGETILSEGGQ 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 123 RFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGS 202
Cdd:MTH00199 98 SSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGE 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 203 FEFRDlfqifNNLISNNEVDFLFVTLCavLLFagaiaKSAQFPLHVWLPDAMEG-PTPISALIhaATMVAAGIFlvarlm 281
Cdd:MTH00199 178 TSIQG-----INSILTGDVGKILITIS--LLF-----KLSAAPFHMWAPDVYEGaPTITTALL--ATVPKIGVF------ 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 282 PLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHayskALLFL 358
Cdd:MTH00199 238 SILVQIGPVTNVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFESiqaSLIYMIIY----VIMSI 313
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2786557249 359 GSGSVIHSMETLVGYcpkksqnMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEIL 421
Cdd:MTH00199 314 CSFSIILSLKLTKGL-------IVEVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
89-456 |
2.52e-17 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 86.03 E-value: 2.52e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 89 IDPLTSIMSILITTVGILVLIYsdNYMSHDHGYLRFF-AYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGfwft 167
Cdd:PRK08042 58 ISPLNAIWLITLGLCGLFVSLF--NIDWHRHAQVKANgLLINLLMAAAVCAVIASNLGMFVVMAEIMALCAVFLTG---- 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 168 rpvAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVDFLFVTlcAVLLFAGAIaksaqfPLH 247
Cdd:PRK08042 132 ---NSKEGKLWFALGRLGTLLLAIACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVI--GFGLLAGII------PLH 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 248 VWLPDAMEGPTPISALIHAATMVAAGIF--LVARLM----PLFLVIppimnFISLIGIITVFLGATLALAQKDIKRGLAY 321
Cdd:PRK08042 201 GWVPQAHANASAPAAALFSTVVMKIGLLgiLTLSLLggnaPLWWGV-----ALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 322 STMSQLGYMMLALGMG--------------SYRSALFHLITHAYSKALLFLGSGSVIHSmetlVGYcpkksQNMVLMGGL 387
Cdd:PRK08042 276 HTLENIGIILLGLGAGvtgialeqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWFR----TGH-----RDIEKLGGI 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 388 TKHVPITKNSFFLGTLSLCGIPPLACFWSKDEI------LNDSWLY-----SPIFAIIAWSTAGLTAFYMCRIYLLTFEG 456
Cdd:PRK08042 347 GKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIyqsffkLSNSGAFvarllGPLLAVGLAITGALAVMCMAKVYGVTFLG 426
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
16-454 |
1.90e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 82.88 E-value: 1.90e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 16 LPVPMLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIQQINSSSVYqyvwswiinndfslefgYLIDPLtSI 95
Cdd:PRK08676 5 YLLVALLFLRLGLLSRSHRLLNALALGHGLWHLGLSLWVLLVLPLPGYFMESRY-----------------LFIDHL-GI 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 96 MSILITTVG-ILVLIYSDNYMSH-------DHGYLRFFaymsFFSTSMLGLVT-----SSNLIQIYIFWELVGMCSYLLI 162
Cdd:PRK08676 67 FVVLIASVVfILAALYARGYVDHllsngelDPENLKVF----YLGFNLLLSVItfaffSDNLALFWIFAELTTVFSAMLI 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 163 GFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWV-----TGSFEFRDLFQIFNNLISNnevdflFVTLCAVLLFAGA 237
Cdd:PRK08676 143 AILSARENIDAALKYIFIASTAMIFAFIGLIFLFSLTrqalgTGTLNWTELAAHASLLSPS------VLGASFLFIFIGF 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 238 IAKSAQFPLHVWLPDA-MEGPTPISALIhAATMVAAGIFLVARLMPLFL---VIPPIMNFISLIGIITVFLGATLALAQK 313
Cdd:PRK08676 217 LAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRqsgAAEQFSNVLIGLGIFSIAVAAFSMLSQR 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 314 DIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLGSGsVIHSMetlvgycpKKSQNMVLMGGLTKH 390
Cdd:PRK08676 296 NLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG-ILHRQ--------YRSDRFDRIFDVFRL 366
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2786557249 391 VPITKNSFFLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMCRIYLLTF 454
Cdd:PRK08676 367 QPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
134-417 |
3.10e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 81.23 E-value: 3.10e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 134 SMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFN 213
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLCGTTGGLHLSYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 214 NLISNNEVDFLFVTLCAV--LLFAGAIAksaqfPLHVWLPDAMEG-PTPISALIhaATMVAAGIFLvarlmpLFLVIPPI 290
Cdd:MTH00196 85 SGQSFSSVSVPIGYLLIIvaLLFKLSVA-----PFHMWAPDVYEGaPTKTTALL--AIVPKLGIFS------ILVSIGLN 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 291 MNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRS---ALFHLITHAYSKALLFLgsgsvihsm 367
Cdd:MTH00196 152 VNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESiqaSLVYLFIYIIMSICVFS--------- 222
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2786557249 368 eTLVGYCPKKSQnMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSK 417
Cdd:MTH00196 223 -IILALNVYKNL-IIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGK 270
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
87-417 |
3.53e-16 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 82.00 E-value: 3.53e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 87 YLIDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLrFFAYMSFFSTSmlGLVTSSNLIQIYIFWELVGMCSyllIGFWF 166
Cdd:PRK06277 68 YLFNPAKQIIIFVLSLIASLVLITGLGEKKSSGLYV-FLMLMGLASVS--AIVLADDIFNLYVFFEIAAIVQ---VGLVI 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 167 TRPV--AAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLfqifNNLISNNEVDFLFVTLCAVLLFaGAIAKSAQF 244
Cdd:PRK06277 142 ASGTeeAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDI----HNALLVNPTSPVIYGGLLLLIF-GLLYGSGLP 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 245 PLHVWLPDAMEGPTP-ISALIHA---ATMVAAGIFLVaRLMPLFLVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLA 320
Cdd:PRK06277 217 PFHTIKSDIYAKAKPfGSALLQTfskFVLVALMLVIF-KLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLA 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 321 YSTMSQLGYMMLALGMG---SYRSALFHLITHAYSKALLFLGSGsvihsmetLVGYCpKKSQNMVLMGGLTKHVPITKNS 397
Cdd:PRK06277 296 YHAISQGGYVAAGLALGtplGIVAGIFHAINHVIYKSALFLGAG--------IVSYR-TKTSNLRKLGGLLPVMPVVAFM 366
|
330 340
....*....|....*....|
gi 2786557249 398 FFLGTLSLCGIPPLACFWSK 417
Cdd:PRK06277 367 VLCAKLAISGVPPFNGFQSK 386
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
47-448 |
7.90e-16 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 80.85 E-value: 7.90e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 47 LLSIVMIFSMNLSIQQINSSSVYQYVWSWIINNDFSLEFGYLIDPLTsIMSILITTVGILVliysdnYMSHDHGYLRFFA 126
Cdd:PRK12561 19 FALMCYVFWQHYDPSSSSLQLVERYAWLPQIGLEWSLGVDGLSMPLV-LLSGLITTLSIFA------SWKVTRKPRLFYF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 127 YMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF--TRPVAAkacQKAFVTNRVGDFGLLLGILGFYWVTGSFE 204
Cdd:PRK12561 92 LMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGgqKRLYAA---TKFILYTALASIFILVAGLALALSGDTFT 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 205 FrDLFQIfnnliSNNEVDFLFVTLCAVLLFAGAIAKSAQFPLHVWLPDAM-EGPTPISalihaatMVAAGIFL------- 276
Cdd:PRK12561 169 F-DLAEL-----GAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyal 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 277 ----VARLMPLFLVIPPIMnfiSLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHLI 347
Cdd:PRK12561 236 irfnVQMLPDAHVYFAPAL---AILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL--LGIAAFTDlgisgAMLQMI 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 348 THAYSKALLFLGSGSVIHSMETLVgycpkksqnMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEI---LNDS 424
Cdd:PRK12561 311 SHGLIAAALFFLTGVTYERTHTLS---------IPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVflgITSS 381
|
410 420 430
....*....|....*....|....*....|.
gi 2786557249 425 WLYSPIFAIIAWSTAG----LTAFY---MCR 448
Cdd:PRK12561 382 DVYSSTFRTITILLAAvgliLTPIYllsMLR 412
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
75-125 |
2.31e-14 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 67.84 E-value: 2.31e-14
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2786557249 75 WIINNDFSLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFF 125
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
127-417 |
4.09e-14 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 75.47 E-value: 4.09e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 127 YMSFFSTSMLG---LVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSF 203
Cdd:PRK02504 112 FAAILLTATLGgmfLSGATELVMIFISLETLSIASYLLTGYMKRDPRSNEAALKYLLIGAASSAIFLYGSSLLYGLSGGS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 204 EfrDLFQIFNNLISNNEvdfLFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEG-PTPISALIHAATMvAAGIFLVARLmp 282
Cdd:PRK02504 192 T--QLSAIALALITSPS---LGLALALVFVIAGIAFKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRL-- 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 283 LFLVIPPIMN----FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHayskal 355
Cdd:PRK02504 264 LVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAY------ 337
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2786557249 356 LFLGSGS----VIHSMETlvgycpkKSQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSK 417
Cdd:PRK02504 338 LFMNLGAfacvILFSLRT-------GTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-445 |
1.85e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 67.18 E-value: 1.85e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 9 WIIpfLPLPVPMLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIfsMNLSIQQINSSSVYQYvwswiinNDFSLEFG-- 86
Cdd:PRK12666 7 LII--LPILLPLLTAALLLLLDERRRRLKRAISLASTLLLLAVAV--ALLASAAAGGIGVYLL-------GNWPAPFGiv 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 87 YLIDPLTSIMSILITTVGILVLIYSdnyMSHDHGYLRFF-AYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSY--LLIG 163
Cdd:PRK12666 76 LVLDRLSALMLLLTALLALAALLYA---LAGWDRAGPHFhALFQFQLMGLNGAFLTGDLFNLFVFFEVLLAASYglLLHG 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 164 FWFTRpvaAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNLISNNEVdfLFVTLCAVLLFAGAIaKSAQ 243
Cdd:PRK12666 153 SGRAR---VRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAADRA--LLEAGAALLLVVFLI-KAAM 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 244 FPLHVWLPDA-MEGPTPISALIhaATMVAAGIFLVARLMPLFL--VIPPIMNFIS----LIGIITVFLGATLALAQKDIK 316
Cdd:PRK12666 227 WPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLLFgpEAGASAGFGQdwllPGGLATLAFGAIGVLAAQRLR 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 317 RGLAYSTMSQLGYMMLALGMGSYR---SALFHLITHAYSKALLFL----------GSGSVIHSMETLVGYCPKksQNMVL 383
Cdd:PRK12666 305 RLAAYLVLVSSGTLLAAIGLGNPAataAALYYLVHSTLAAAALFLladlverqrgAAADRLAVTPELYDLDEE--EEEEV 382
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2786557249 384 MGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEILN---------DSWLY------SPIFAIIAWSTAGLTAFY 445
Cdd:PRK12666 383 GVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQallnppgagAAWWLwalvllSGLAALIALTRAGIRLFW 459
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
95-445 |
3.17e-10 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 63.02 E-value: 3.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 95 IMSILITTVGILVLIYSDNYMSHDhgylrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKA 174
Cdd:MTH00226 109 ILTGFIVPCSILISWHSVKYLTKS-----FLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQA 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 175 CQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIfNNLISNNEVDFLFVTlcavlLFAGAIAKSAQFPLHVWLPDA- 253
Cdd:MTH00226 184 AYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASC-SHVVSEQTQKWIFLG-----IFLAMAVKIPIFPFHIWLPKAh 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 254 MEGPTPISALIHAATMVAAGIFLVARLMPLF-LVIPPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMML 332
Cdd:MTH00226 258 VEAPVAGSVLLAGILLKLGGYGLVRLSWPILpLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSI 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 333 AL---GMGSYRSALFHLITHAYSKALLFLgsgsvihsMETLVgYCPKKSQNMVLMGGLTKHVPITKNSFFLGTLSLCGIP 409
Cdd:MTH00226 338 TLvthDIIGLTGSIFIMLAHGIVSSLLFI--------LVTIL-YDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVP 408
|
330 340 350
....*....|....*....|....*....|....*.
gi 2786557249 410 PLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFY 445
Cdd:MTH00226 409 PSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVY 444
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
223-449 |
6.00e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 62.57 E-value: 6.00e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 223 FLFVTLCAVLLFAGAiaksaqfPLHVWLPDAMEG-PTPISALIHAATMVAAGIFLVARLMPLFLVIPpimnfislIGIIT 301
Cdd:MTH00198 302 YLFITVAILFKLAAA-------PFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTSLVITSKLLLS--------VAIIS 366
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 302 VFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSaLFHLITHAYSKALLFLGSGSVIHSMETL-VGYCPKKSQN 380
Cdd:MTH00198 367 LVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYES-LQASWTYAVTYLVSALASFTVICTLEEFgTRTPTSRQRD 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 381 MVLMGG-----------LTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEILNDS----WLYS-PIF---AIIAWSTAGL 441
Cdd:MTH00198 446 GSFGNYnlvrrlvdltiLSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSikiaFSSSlSIYylvALFAIICTCI 525
|
....*...
gi 2786557249 442 TAFYMCRI 449
Cdd:MTH00198 526 SAFYYIRI 533
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
148-393 |
2.05e-09 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 60.49 E-value: 2.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 148 YIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGI-LGFYWVTGSFEFRDLfqifnnliSNNEVDFLFV 226
Cdd:PRK02546 141 FLAWELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALaMAFYGDTPTFDMTAL--------AAKDFGLGFQ 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 227 TLC-AVLLFAGAIaKSAQFPLHVWLPDAMEGPTpisALIHaatMVAAGIFLV----------ARLMP-LFLVIPPIMnfi 294
Cdd:PRK02546 213 LLCyAGLLIAYGV-KLPIVPLHTWLPDAHGEAT---APVH---MLLAGILLKmggyallrmnAGMLPdAHAQFAPLL--- 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 295 SLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSYRS-----ALFHLITHAYSKALLFLgsgsvihsmet 369
Cdd:PRK02546 283 IVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL--IGIGSFTDlgtsgAMLQMISHGLIGASLFF----------- 349
|
250 260
....*....|....*....|....*.
gi 2786557249 370 LVGYCPKKSQNMVL--MGGLTKHVPI 393
Cdd:PRK02546 350 LVGATYDRTHTLMLdeMGGVGQKMRK 375
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
94-411 |
2.11e-09 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 60.57 E-value: 2.11e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 94 SIMSILITTVGILVLIYSDNYmSHDHGYLRffAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWftrpvaAK 173
Cdd:PRK06459 47 SFFSIISTIVWILASLYSIEY-DHYGKWLS--SLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT------KK 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 174 ACQKAFVTNRVGDFGLLLGILGFYW---VTGSFEFrdlfqifnnlisnnevDFLFVTLCAVLLFAGAIAKSAQFPLHV-- 248
Cdd:PRK06459 118 NKRPAFVFMAFGELSTVLILAGFAWafiISGTTNF----------------SYLPSPVPLILASFGFIIKMGMMPFLVse 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 249 WLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPP--IMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQ 326
Cdd:PRK06459 182 WLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIgyFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIEN 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 327 LGYMMLALGM--------GSYR-----SALFHLITHAYSKALLFLGSGSVihSMETLvGYCPKKSQNMVLMGGLtkhvpi 393
Cdd:PRK06459 262 NGAILVALGLymvtkqliTSIEhfsliTVILYSFAHSVAKTGLFLSSGLQ--EKQSI-TYSKKIRNRWIELGLT------ 332
|
330
....*....|....*...
gi 2786557249 394 tknsffLGTLSLCGIPPL 411
Cdd:PRK06459 333 ------LLASSLSGLLPN 344
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
74-409 |
3.45e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 59.69 E-value: 3.45e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 74 SWIINNDFSLEFGYLIDPLTSI------MSILITTVGILVLIYSDNYMshdhgYLRFFAYMSFFSTSMLGLVTSSNLIQI 147
Cdd:MTH00204 63 EWIISPTLNFQWGPLVFAVDGVslffilLTTLLIPICILISWKSIKFL-----FKEFLLCLLFLEVLLIGVFSVLDLLLF 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 148 YIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSfefRDLFQIFNNLISNNEVDFLFVT 227
Cdd:MTH00204 138 YILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGT---TDYQILLNIKLPLSIQKWLLVG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 228 lcavlLFAGAIAKSAQFPLHVWLPDA-MEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPIMN-FISLIGIITVFLG 305
Cdd:MTH00204 215 -----FFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFApLIVMLSVIAVIYG 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 306 ATLALAQKDIKRGLAYSTMSQLGYMMLAL---GMGSYRSALFHLITHAYSKALLFLGSGSVIHSMET-LVGYcpkksqnm 381
Cdd:MTH00204 290 SLTTCRQVDFKRLIAYSSVAHMGLVPLGLfthTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTrLIKY-------- 361
|
330 340
....*....|....*....|....*...
gi 2786557249 382 vlMGGLTKHVPITKNSFFLGTLSLCGIP 409
Cdd:MTH00204 362 --YRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
20-466 |
5.24e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 59.18 E-value: 5.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 20 MLIGLGLLLFPTATKSLRRMW---AFQSVLLLSIVMIFSMNLSIQQINSSSvyqyvwswiinndfsleFGYLIDPLTSIM 96
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWrstTFFSFLIALLFLLWFKWSSEVGWSFSN-----------------LYLSYDPLSSPL 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 97 SILITTVGILVLIYSDNYMsHDHGYLRFFAYMSFFSTSMLGLV---TSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAK 173
Cdd:MTH00206 65 VILSCWLLPLMFLASQNHM-KNEPINRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTLLLITRWGNQKERLN 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 174 ACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFrDLFQIFNNLISNNEVDFLFVTLcavllfaGAIAKSAQFPLHVWLPDA 253
Cdd:MTH00206 144 AGYYFLFYTLIGSLPLLIALLFLQNSLGSLSL-YILYFSKLTTWNNNLWWLACIL-------AFLVKLPLYGVHLWLPKA 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 254 -MEGPTpisalihAATMVAAGIFLVA---RLMPLFLVIPPIMN----FISLIGIITVFLGATLALAQKDIKRGLAYSTMS 325
Cdd:MTH00206 216 hVEAPV-------AGSMVLAGVLLKLggyGMMRIILILGPSTKlssyFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVS 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 326 QLGYMMLALGMG---SYRSALFHLITHAY-SKALLFLGSgsvihsmetlVGYCPKKSQNMVLMGGLTKHVPITKNSFFLG 401
Cdd:MTH00206 289 HMSLVTAGILSGspwGFKGALLLMIAHGLvSSALFCLAN----------LLYERSHTRTILGNRGLQMILPLLSFWWLLF 358
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2786557249 402 TLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMCRIYLLTFEGHLNVHFQNYS 466
Cdd:MTH00206 359 FLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNHLLSLS 423
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
46-444 |
7.25e-08 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 55.52 E-value: 7.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 46 LLLSIVMIFSMNLSIQQINSSSVYQYVWSWIINNDFSLEFGYL-IDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRF 124
Cdd:MTH00014 13 LLPLIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLsSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 125 FAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFE 204
Cdd:MTH00014 93 MTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLS 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 205 FrdlfqifnnLISNNEVDFLFVT-LCAVLLFAGAIAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------ 276
Cdd:MTH00014 173 M---------LMSSMEPPSIYLMnLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggyg 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 277 VARLMPLFLVIPPIM-NFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYS 352
Cdd:MTH00014 237 LLRMSSLFMHINKSLsAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTswgWQGALAMMIAHGLC 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 353 KALLFlgsgsVIHSMEtlvgYCPKKSQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSK----DEILNDSWLYS 428
Cdd:MTH00014 317 SSALF-----ALANMT----YETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEimllTSILSSSLSTA 387
|
410
....*....|....*.
gi 2786557249 429 PIFAIIAWSTAGLTAF 444
Cdd:MTH00014 388 ILLAITSFLAAAYSLF 403
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
122-464 |
7.74e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 55.35 E-value: 7.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 122 LRFFAYMSFFSTSMlglvtssnlIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTG 201
Cdd:MTH00127 103 LQIFLILAFGATEI---------IMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTG 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 202 SFEFRDLfQIFNNLISNNEVDFLFVTLC--AVLLfagaiaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVAR 279
Cdd:MTH00127 174 TLSMLTL-QYSQPLQLSSWADKLWWAGCllAFLV------KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMR 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 280 LMPLF--LVIPPIMNFISLiGIITVFLGATLALAQKDIKRGLAYSTMSQLGYM---MLALGMGSYRSALFHLITHAYSKA 354
Cdd:MTH00127 247 MMVMLdpLTKELSYPFIIL-ALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVaggILIQTPWGFTGALILMIAHGLTSS 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 355 LLFLGSGSvihsmetlvGYCPKKSQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAII 434
Cdd:MTH00127 326 ALFCLANT---------NYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLAL 396
|
330 340 350
....*....|....*....|....*....|
gi 2786557249 435 AWSTAGLTAFYMCRIYLLTFEGHLNVHFQN 464
Cdd:MTH00127 397 TGLGTLITAGYSLYMFLMTQRGPLPDHIIA 426
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
87-332 |
6.27e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 52.48 E-value: 6.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 87 YLIDPLTSIMSILITTVGILVLIYSDN--------YMSHDHGYLrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCS 158
Cdd:PRK06591 73 YRLNSLNQAIIVYLNLVLLFFLVFCHKitnqtilkYINNNRKSL-FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 159 YLLIgfwfTRPVAAKACQKAFVTNRVGDFG--LLLGILGFYW-VTGSFEFRDLFQIFNNLISNNevdflFVTLCAVLLFA 235
Cdd:PRK06591 152 YVLI----ASGNNPKSLIGAFDYLIMGSIGatLILIAIGFLLsITGSLNMTDIAAYLQEHTNSR-----IITIAIGFFLI 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 236 GAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPLFLVIPPI----MNFISLIGIITVFLGATLALA 311
Cdd:PRK06591 223 GAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIYKFTYIIIGYETIktaiTNFIRPIALATLIIAPYFAYQ 302
|
250 260
....*....|....*....|.
gi 2786557249 312 QKDIKRGLAYSTMSQLGYMML 332
Cdd:PRK06591 303 AKNFKNIIIYSCFTQIGYVFL 323
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
227-423 |
6.37e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 52.13 E-value: 6.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 227 TLCAVLLFAGAIaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarlmpLFLVIPPI-MNFISLIGIITVFLG 305
Cdd:MTH00112 93 TSCTLLTLALAM-KLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTL------LLMTSNSLnPTLLLTLAILSTLIG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 306 ATLALAQKDIKRGLAYSTMSQLGYMMLALGMgSYRSALFHLITHAYSKALLFLgsgsVIHSMETlvgycpKKSQNMVLMG 385
Cdd:MTH00112 166 GWGGLNQTQLRKIMAFSSIAHLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTST------KTLKDMMTSW 234
|
170 180 190
....*....|....*....|....*....|....*...
gi 2786557249 386 GLTKHVPITknsFFLGTLSLCGIPPLACFWSKDEILND 423
Cdd:MTH00112 235 TKSPTLNTT---LMLTLLSLAGLPPLTGFMPKWLILQE 269
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
127-449 |
6.84e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 51.89 E-value: 6.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 127 YMSFFSTSMLGL---VTSSNLIQIYIFWELVGMCSYLLIGFWFTrPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSF 203
Cdd:MTH00200 6 LPLFILSLGLGTlltFSSSHWFLIWLGLEINTLAIIPLLIKQHH-PRKVEATTKYFIIQATASALLLFGGLLNAWTSGQW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 204 efrDLFQIFNNLIsnnevdflfvtlcAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLMPL 283
Cdd:MTH00200 85 ---GISEMLGPLS-------------ETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPA 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 284 flvipPIMNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLgsgsv 363
Cdd:MTH00200 149 -----LNSNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLL----- 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 364 ihsMETLvgycpkKSQNMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEILNDSWLYS-PIFAIIAWSTAGLT 442
Cdd:MTH00200 219 ---LNLL------NSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGlFIYATILLLGSLLS 289
|
....*..
gi 2786557249 443 AFYMCRI 449
Cdd:MTH00200 290 LFFYLRL 296
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
95-353 |
1.12e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 51.98 E-value: 1.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 95 IMSILITTVGILVLIYSDNYMSHDhgylrFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKA 174
Cdd:MTH00217 87 ILTALLTPICILISWNSIKFLIKE-----FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 175 CQKAFVTNRVGDFGLLLGILGFYWVTGSFEfrdlFQIFNNLISNNEVDFlFVTLCAVLLFAGAIAKsaqFPLHVWLPDA- 253
Cdd:MTH00217 162 SYYFFFYTFIGSVFMLLGIFTLYSYAGTTD----YQALCCLKIEKELQY-FIFLGFFLSLAIKIPK---IPFHIWLPQAh 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 254 MEGPTPISALIHAATMVAAGIFLVARLMPLFlvipPIMN-----FISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLG 328
Cdd:MTH00217 234 VEAPVAGSVILAGVLLKLGGYGFIRFSWPLL----PEASeyfspLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMG 309
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 2786557249 329 ------------------YMMLALGMGSyrSALFHLITHAYSK 353
Cdd:MTH00217 310 lvtlgifshtiqglvaaiFLMLAHGLVS--SALFIAVTFLYER 350
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
223-435 |
1.55e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 50.65 E-value: 1.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 223 FLFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLvarlMPLFLVIPPIMNFISLIGIITV 302
Cdd:MTH00144 80 LSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFL----LSNFLDLYWLAYLLCVISVLSA 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 303 FLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETLVGYCPKKSQNMV 382
Cdd:MTH00144 156 LVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGLS 235
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 2786557249 383 LMGGLtkhvpitknsfflgtLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIA 435
Cdd:MTH00144 236 IISLL---------------LSLGGLPPFLGFCSKLLVLISSMESSPLLLILL 273
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
69-434 |
1.23e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 48.30 E-value: 1.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 69 YQYVWSWIINNDFslefgYLIDPLTSIMSILITTVGILVLIYSdNYMshdhgyLRFFAYMSFFSTSMLGLV-------TS 141
Cdd:MTH00150 7 YSSFSSYESLSEL-----FSVDSMSSLLISLSLWISGLMMLAS-QKS------VKLRNKSSSFSLLVLLLClilvlafSV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 142 SNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFrdlfqIFNNLISNNEV 221
Cdd:MTH00150 75 SSLLMFYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFM-----LLISSLRKLLS 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 222 DFLFVTLCAVLLFagaIAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLMPLFLVIPpiMNFI 294
Cdd:MTH00150 150 SMGLWGLLVFLAF---LVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSLSS--SSFS 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 295 SLIGIITV---FLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGS---YRSALFHLITHAYSKALLFlgsgsvihsme 368
Cdd:MTH00150 218 IFLISLSLwggVLTSLICLRQSDVKSLIAYSSVGHMSLVLAGVLSNTswgWVGALIMMVSHGFCSSGLF----------- 286
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2786557249 369 TLVGYCPKKSQ--NMVLMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAII 434
Cdd:MTH00150 287 CLANYTYEKVHsrSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVP 354
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
124-433 |
3.20e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 46.85 E-value: 3.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 124 FFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTrPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSF 203
Cdd:MTH00041 6 LIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFS-PRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 204 efrDLFQIFNNLISnnevdflfvtlcaVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIhaatmvAAGIFLVARLMPL 283
Cdd:MTH00041 85 ---SINGPLNTLSS-------------IIITLALALKLGLAPCHFWFPDVLQGLPFLQGLI------IATWQKIAPLILL 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 284 FLVIPPI-MNFISLIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSgs 362
Cdd:MTH00041 143 ISISNLLnSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGN-- 220
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2786557249 363 vIHSMETLVGycpkksqnmvlMGGLTKHVPITKNSFFLGTLSLCGIPPLACFWSK-----DEILNDSWLYSPIFAI 433
Cdd:MTH00041 221 -NFSLSTLSH-----------LNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKfislyCLIQNNSILISIILII 284
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
88-461 |
9.26e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 45.68 E-value: 9.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 88 LIDPLTSIMSILITTVGILVLIYSDNYMSHD-HGYLRFFAYMSFF-STSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFW 165
Cdd:MTH00068 57 GIDQISSPLLILTCWLLPLMILASQNHLKNEpINRQRTYISMLIIlQLTLILAFSATELILFYIFFEATLIPTLIIITRW 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 166 FTRPVAAKACQK-AFVTnRVGDFGLLLGILGFYWVTGSFEFrDLFQIFNNLISNNEVDFLFVTLCaVLLFagaIAKSAQF 244
Cdd:MTH00068 137 GNQEERLNAGTYfLFYT-LAGSLPLLIALLILQNSLGSLSL-ILLELMSPMQLMTYTNKIWWLAC-LLAF---MVKMPLY 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 245 PLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARLMPLFlviPPIMNFISLIGIITVFLG----ATLALAQK 313
Cdd:MTH00068 211 GLHLWLPKAhVEAPI-------AGSMILAAVLLklggygILRISILL---TPLSKELSYPFIILALWGvlmtSLICLRQT 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 314 DIKRGLAYSTMSQLGYMMLALGMG---SYRSALFHLITHAY-SKALLFLGSGSvihsmetlvgYCPKKSQNMVLMGGLTK 389
Cdd:MTH00068 281 DLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLtSSALFCLANTN----------YERTHSRTLLLLRGAQT 350
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2786557249 390 HVPITKNSFFLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAIIAWSTAGLTAFYMCRIYLLTFEGHLNVH 461
Cdd:MTH00068 351 ILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMFLMTQRGPLPNH 422
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
222-422 |
2.57e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 43.89 E-value: 2.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 222 DFLFVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIhaatmvaagIFLVARLMPLFLVIPPIMNFISLI--GI 299
Cdd:MTH00197 74 NLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFL---------LATWQKLAPLLILAFNSSSFMGLLicSV 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 300 ITVFLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALLFLGSGSVIHSMETLVGYCPKKSQ 379
Cdd:MTH00197 145 LSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSS 224
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2786557249 380 NMVLMGgltkhvpitknsffLGTLSLCGIPPLACFWSKDEILN 422
Cdd:MTH00197 225 NLVFLG--------------LSFLSLGGLPPLSGFFLKWLILT 253
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
136-370 |
2.59e-04 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 44.17 E-value: 2.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 136 LGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTnRVGDFGLLLGIL--GFYwvtGSFEFRDLFQIFN 213
Cdd:CHL00011 126 IGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSATKFILYT-AGGSIFLLIGVLgmGLY---GSNEPTLNFETLA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 214 NLISNNEVDFLFVTlcaVLLFAGAIaKSAQFPLHVWLPDamegpTPISAliHAAT-MVAAGIFLVarlMPLFLVIPPIMN 292
Cdd:CHL00011 202 NQSYPVALEILFYI---GFLIAYAV-KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLK---MGAYGLIRINME 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 293 FIS-----------LIGIITVFLGATLALAQKDIKRGLAYSTMSQLGYMMlaLGMGSY-----RSALFHLITHAYSKALL 356
Cdd:CHL00011 268 LLPhahsifspwlvIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII--IGIGSItdtglNGAILQIISHGFIGAAL 345
|
250
....*....|....
gi 2786557249 357 FLGSGSVIHSMETL 370
Cdd:CHL00011 346 FFLAGTSYDRIRLV 359
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
82-351 |
3.31e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 43.81 E-value: 3.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 82 SLEFGYLIDPLTSIMSILITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLL 161
Cdd:MTH00205 48 FISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLIL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 162 IGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGFYWVTGSFEFRDLFQIFNNlisnnevDFLFVTLCAVLLFAgAIAKS 241
Cdd:MTH00205 128 ILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFS-------DFYLFLYWIFLMLA-FLVKL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 242 AQFPLHVWLPDA-MEGPTpisalihAATMVAAGIFL------VARL-MPLFLVIPPIMNFISLIGIITVFLGATLALAQK 313
Cdd:MTH00205 200 PMYFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLIRItSMLYKLNSNFSELFFSISLWGGVMTGMICLRQV 272
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 2786557249 314 DIKRGLAYS-------------TMSQLGY-----MMLALGMGSyrSALFHLITHAY 351
Cdd:MTH00205 273 DLKSLIAYSsvghmglmvvgvfSNTSWGMngaiiMMVAHGLCS--SGMFALANVNY 326
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
20-353 |
1.10e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 42.06 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 20 MLIGLGLLLFPTATKSLRRMWAFQSVLLLSIVMIFSMNLSIQqinsssvyqyvwswiiNNDFSLEFGYLIDPLTSIMSIL 99
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLS----------------FYFSNISYFFGLDLLSFGLILL 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 100 ITTVGILVLIYSDNYMSHDHGYLRFFAYMSFFSTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAF 179
Cdd:MTH00163 65 SFWICMLMILSSESVYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLL 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 180 VTNRVGDFGLLLGILGFYWVTGSFefrdlfqiFNNLISNNEVDFLFVTLCAVLLFagaIAKSAQFPLHVWLPDA-MEGPT 258
Cdd:MTH00163 145 FYTLFASLPLLVGIFYLYNNSGSL--------SFFLLNFFGSLNFLWYLSMILAF---LVKMPMFFVHLWLPKAhVEAPV 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 259 PISaLIHAATMVAAGIFLVARLMPLFLVIPPIMNFI-SLIGIITVFLGATLALAQKDIKRGLAYS-------------TM 324
Cdd:MTH00163 214 SGS-MILAGVLLKLGGYGLLRVMSFFSKLGLKFNYIwISISLVGGVIVSLICLRQVDLKSLIAYSsvahmglvlgglmTF 292
|
330 340 350
....*....|....*....|....*....|....
gi 2786557249 325 SQLGY-----MMLALGMGSyrSALFHLITHAYSK 353
Cdd:MTH00163 293 SYWGLmgsllMMIGHGLCS--SGLFCLANIIYER 324
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
44-330 |
1.40e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 41.88 E-value: 1.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 44 SVLLLSIVMIFSMNLSIQqINSSSVYQYVWSWIINNDFSLEFGYL-----IDPLTSIMSILITTVGILVLIYSDNYMS-H 117
Cdd:MTH00044 10 GIAITSWIVPKNKLWPIS-ISQSSLISLLSLFLLNNHWSSSWHNLslslaTDSLSSPLIILSCWLAPLSLLASINHLSnN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 118 DHGYLRFFAYMSFFSTSMLGLVTSS-NLIQIYIFWELVGMCSYLLIGFWFTRPVAAKACQKAFVTNRVGDFGLLLGILGF 196
Cdd:MTH00044 89 SPNNQRTFISLIIIILTALIITFSSlELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAI 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 197 YWVTGSfefrdLFQIFNNLISNNEVDFLFVTLCAVLLFAGAIAKSAQFPLHVWLPDA-MEGPTPISaLIHAATMVAAGIF 275
Cdd:MTH00044 169 YSSSSS-----LSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-MILAAILLKLGGY 242
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 2786557249 276 LVARLMPLFlvIPPIMNFISLIGIITVFLGATLA----LAQKDIKRGLAYSTMSQLGYM 330
Cdd:MTH00044 243 GLIRLINLF--SLPSANNISFILIVFCCWGALITsiicLRQTDLKALIAYSSVGHMSLV 299
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
225-434 |
3.01e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 40.87 E-value: 3.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 225 FVTLCAVLLFAGAIAKSAQFPLHVWLPDAMEGPTPISALIHAA--TMVAAGIFLvarlmpLFLVIPPIMNFIsliGIITV 302
Cdd:PRK12664 142 YTGYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLSLftTKVAALVLL------LFFSGEEILLFL---GIITA 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2786557249 303 FLGATLALAQKDIKRGLAYSTMSQLGYMMLALGMGSYRSA-----LFHLITHAYSKALLFLGSGSVIHSMETLvgycpkk 377
Cdd:PRK12664 213 IYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSGVaigilILQIVLSVVYQTLLFMVADSVINRTRKF------- 285
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2786557249 378 sqNMVLMGGLTKhVPITKNSFFLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAII 434
Cdd:PRK12664 286 --NLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLY 339
|
|
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